Comparison of molecular transformation of dissolved organic matter in vermicomposting and thermophilic composting by ESI-FT-ICR-MS

Thermodynamics and explainable machine learning assist in interpreting biodegradability of dissolved organic matter in sludge anaerobic digestion with thermal hydrolysis

Dissolved organic matter (DOM) is essential in biological treatment, yet its specific roles remain incompletely understood. This study introduces a machine learning (ML) framework to interpret DOM biodegradability in the anaerobic digestion (AD) of sludge, incorporating a thermodynamic indicator (λ). Ensemble models such as Xgboost and LightGBM achieved high accuracy (training: 0.90-0.98; testing: 0.75-0.85). The explainability of the ML models revealed that the features λ, measured m/z, nitrogen to carbon ratio (N/C), hydrogen to carbon ratio (H/C), and nominal oxidation state of carbon (NOSC) were significant formula features determining biodegradability. Shapley values further indicated that the biodegradable DOM were mostly formulas with λ lower than 0.03, measured m/z value higher than 600 Da, and N/C ratios higher than 0.2. This study suggests that a strategy based on ML and its explainability, considering formula features, particularly thermodynamic indicators, provides a novel approach for understanding and estimating the biodegradation of DOM.

Deciphering the bioavailability of dissolved organic matter in thermophilic compost and vermicompost at the molecular level

Studies on compost dissolved organic matter (DOM) previously focus on its composition and humification, without considering DOM bioavailability to understand compost fertility. To decipher the fertility basis of compost, DOM bioavailability in thermophilic compost (TC) and vermicompost (VC) was investigated and linked with its molecular composition. Results showed that DOM bioavailability of VC (36 % BDOC) was generally higher than that of TC (22 % BDOC) due to containing more tannin-like substances. Inversely, only lipid-/carbohydrate-/protein-like substances contributed to DOM bioavailability in TC. Moreover, these differences of bioavailability expanded with C/N decreased in composting materials. Specifically, the %BDOC of VC with N-rich materials (C/N < 25) was 2.1-3.0 times higher than that in TC, while it was only 1.2-1.4 times for C-rich materials (C/N < 25), because N-surplus facilitated the formation of O-/N-containing aromatics (e.g., CHON and tannin) in VC, but inhibited the decomposition of organic materials into small bioactive molecules in TC.

Molecular transformation pathway and bioavailability of organic phosphorus in sewage sludge under vermicomposting

Phosphorus reclamation from sewage sludge is essential for sustainable phosphorus management, as large quantities of phosphorus afflux into wastewater treatment plants and are finally enriched in sewage sludge via phosphorus removal technologies. Meanwhile, vermicomposting is a cost-effective biotechnique for sludge stabilization. This work unveiled the molecular transformation pathway and bioavailability of organic phosphorus (OP) in sludge under vermicomposting with solution 31P NMR, FT-ICR MS and enzymatic hydrolysis assay. In conclusion, vermicomposting transformed OP in two stages. In stage I (day 0 to 14), macromolecule CHONP such as phospholipids, phosphoproteins and nucleic acid were decomposed into orthophosphate and high bioavailability OP including flavin mononucleotide, flavin mononucleotide hydrate and N6-isopentenyladenosine 5'-monophosphate under the action of earthworm intestinal flora. This resulted in the bioavailability of OP reaching a maximum of 13.58 mg/L on day 14. In stage II (day 14 to 28), the enzyme in vermicompost began to dominate the transformation of OP. Under the catalysis of phosphate, high bioavailability orthophosphate monoester was decomposed into orthophosphate. Nitrogen-containing aromatic OP polymerization produced humic acid-like OP under the catalysis of ligase. And phytic acid-like OP were produced under the catalysis of transferase. These led to the OP bioavailability decreasing to 5.60 mg/L on day 28. This work provides a new perspective on sludge phosphorus recovery and use.

Molecular insight into the transformation of dissolved organic matter during sewage sludge composting: An investigation of a full-scale composting plant

The aim of the study was to explore the molecular dynamics and transformation pathways of dissolved organic matter (DOM) in sewage sludge (SS) during composting, and the DOM of raw material, material experiencing thermophilic phase and material collected from humification phase were characterized using electrospray ionization coupled with Fourier transform ion cyclotron resonance mass spectrometry. The results indicated that there were approximately 85% of aliphatic/proteins and 75% of carbohydrate preferentially decomposed in the thermophilic phase. Moreover, lignins/carboxylic-rich alicyclic molecules (CRAM) were the main N-containing substances evolved in the decomposition, which leading to a reduction of N/C ratio from 0.073 to 0.041. Whereas aliphatic acids and tryptophan in lignins/CRAM with high oxidizing capacities are preferentially decomposed in the thermophilic phase. As for maturity phase, the carbon of the newly generated compounds (belonging to lignins/CRAM and tannins), possessed an oxidation state that similar to sulfonates and sulfonamides, and these DOM are beneficial for the humic substances formation. Moreover, it was found that the newly formed N2Ox and N3Ox compounds had a more significant contribution to the double bond equivalent (DBE) of the compost, corresponding to 1.0 and 1.7 DBE, respectively. The results would help explore the understanding of DOM transformation and humification during SS composting in the microscopic molecular level.

Black soldier fly pretreatment promotes humification and phosphorus activation during food waste composting

Black soldier fly (BSF) and thermophilic composting (TC) treatments are commonly adopted to manage food waste. In this study, 30 days of TC of food waste following seven days BSF pretreatment (BC) was compared to 37 days of TC of food waste (TC, the control). Fluorescence spectrum and 16S rRNA high-throughput sequencing analysis were used to compare the BC and TC treatments. Results showed that BC could decrease protein-like substances and increase humus substances more quickly, and that the humification index of compost products was 106.8% higher than that of TC, suggesting that the humification process was accelerated by BSF pretreatment resulting in a 21.6% shorter maturity time. Meanwhile, the concentrations of total and available phosphorus rose from 7.2 and 3.3 g kg-1 to 44.2 and 5.5 g kg-1, respectively, which were 90.5% and 118.8% higher in compost products from BC as compared to those in TC. Furthermore, BC had higher richness and diversity of humus synthesis and phosphate-solubilizing bacteria (PSB), with Nocardiopsis (53.8%) and Pseudomonas (47.0%) being the dominant PSB. Correlation analysis demonstrated that the introduction of BSF gut bacteria contributed to the effectiveness of related functional bacteria, resulting in a rapid humification process and phosphorus activation. Our findings advance understanding of the humification process and provide novel perspectives on food waste management.

Photochemical behaviors of dissolved organic matter in aquatic environment: Generation, characterization, influencing factors and practical application

Dissolved organic matter (DOM) widely exists in aquatic environment and plays a critical role in environmental photochemical reaction. The photochemical behaviors of DOM in sunlit surface waters have received widely attention because its photochemical effects for some coexisted substances in aquatic environment, especially for organic micropollutants degradation. Therefore, to gain a comprehensive understanding of the photochemical properties and environmental effects of DOM, we reviewed the influence of sources on the structure and composition of DOM with relevant identified techniques to analysis functional groups. Additionally, identification and quantification for reactive intermediates are discussed with a focus on influencing factors to produce reactive intermediates by DOM under solar irradiation. These reactive intermediates can promote the photodegradation of organic micropollutants in the environmental system. In future, attention should be paid to the photochemical properties of DOM and environmental effects in real environmental system and development of advanced techniques to study DOM.

Insight into the evolution characteristics on molecular weight of compost dissolved organic matters using high-performance size exclusion chromatography combined with a two-dimensional correlation analysis

The information on molecular weight (MW) characteristics of DOM and relevant evolution behaviors during composting are limited. In this study, DOM extracted from co-composting of chicken manure and rice husks were comprehensively analyzed by using high-performance size exclusion chromatography (HPSEC) combined with a two-dimensional correlation spectroscopy (2D COS) to explore the evolution characteristics of MW of compost DOM. The HPSEC detected at UV of 254 nm and at fluorescence (FL) Ex/Em wavelengths (315/410, 270/455 nm) all showed a gradual increase in both weight-average and number-average MW for DOM, suggesting that the large MW fractions were continuously generated and polymerized during composting. The 2D COS applied on HPSEC-UV and -FL further identified the key active MW chromophoric (i.e., 0.5, 7.2. 9.5, 26.3, 30.7, and 83.9 kDa) and fluorophoric (i.e., 0.55 and 3.5 kDa) molecules that mainly participated in the transformation processes of compost DOM. Moreover, these active MW species were preferentially formed by the order of small to large molecules. A hetero-2D COS analysis disclosed the change sequence in the order of 0.5 and 7.2 kDa chromophores → 3.5 kDa fluorophores, and the 0.55 and 3.5 kDa fluorophores → 26.3 and 83.9 kDa chromophores.

The migration and microbiological degradation of dissolved organic matter in riparian soils

Riparian zones are important natural means of water purification, by decreasing the aqueous concentration of terrestrial organic matter (OM) through adsorption and microbial degradation of the organic matter within the aquatic ecosystem. Limited studies have been reported so far concerning the migration of dissolved organic matter (DOM) in the horizontal and vertical planes of riparian zones. In this study, the migration of DOM in riparian zones, from forest soil to wetland soil, and with soil depth, were explored, based on a case study reservoir. Results showed that riparian wetlands can absorb the OM from the forest soils and adjacent reservoir, and act as a major OM sink through microbial action. Methylomirabilota and GAL15 bacteria increased with soil depth for the two soil systems, and the wetland soil system also contained microbial sulfates, nitrates and carbonates. These microorganisms successfully utilize the Fe³⁺, SO₄^-, and CO₃^- as electron acceptors in the wetland system, resulting in enhanced OM removal. Although the variation of soil DOM in the vertical direction was the same for both forest and wetland soils, the Chemical structure of the DOM was found to be significantly different. Furthermore, the soil was found to be the main source of DOM in the forest ecosystem, with lignin as the main ingredient. The lignin structure was gradually oxidized and decomposed, with an increase in carboxyl groups, as the lignin diffused down into the soil and the adjacent reservoir. PLS-PM analysis showed that the soil physicochemical properties were the main factors affecting DOM transformation. However, microbial metabolism was still the goes deeper affecting factor. This study will contribute to the analysis that migration and transform of soil organic matter in riparian zone.

Using Potential Molecular Transformation To Understand the Molecular Trade-Offs in Soil Dissolved Organic Matter

Understanding the chemical composition and molecular transformation in soil dissolved organic matter (DOM) is important to the global carbon cycle. To address this issue, ultrahigh-resolution Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR-MS) was applied to investigate DOM molecules in 36 paddy soils collected from subtropical China. All the detected 7576 unique molecules were divided into seven compound groups, and nine trade-off relationships between different compound groups were revealed based on principal component analysis and Pearson's correlation. An optimized method was developed to evaluate all potential molecular transformations in DOM samples. The concept of thermodynamics was introduced to evaluate the identified molecular transformations and classify them as thermodynamically favorable (TFP) and thermodynamically limited (TLP) processes. Here, we first tried to understand the molecular trade-offs by using the potential molecular transformations. All the nine trade-offs could be explained by molecular transformations. Six trade-offs had bases of biochemical reactions, and the trade-off-related direct transformations could explain the content variations of carbohydrate-like, condensed aromatic-like, tannin-like, and lignin-like compounds in TLP. More reasonable explanations existed in the TLP rather than TFP, which demonstrated the critical role of external energy in the molecular transformation of soil DOM.

Effects of feeding a pine-based biochar to beef cattle on subsequent manure nutrients, organic matter composition and greenhouse gas emissions

Biochar in ruminant diets is being assessed as a method for simultaneously improving animal production and reducing enteric CH₄ emissions, but little is known about subsequent biochar-manure interactions post-excretion. We examined chemical properties, greenhouse gas (GHG) emissions and organic matter (OM) composition during farm scale stockpiling (SP) or composting (CP) of manure from cattle that either received a pine-based biochar in their diet (BM) or did not (RM). Manure piles were monitored hourly for temperature and weekly for top surface CO₂, N₂O and CH₄ fluxes over 90 d in a semiarid location near Lethbridge, AB, Canada. Results indicate that cumulative CO₂, N₂O and CH₄ emissions were not affected by biochar, implying that BM was as labile as RM. The pH, total C (TC), NO₃-N and Olsen P were also not influenced by biochar, although it was observed that NH₄-N and OM extractability were both 13% lower in BM than RM. Solid-state ¹³C nuclear magnetic resonance (NMR) showed that biochar increased stockpile/compost aromaticity, yet it did not alter the bulk C speciation of manure OM. Further analysis by Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) revealed that dissolved OM was enriched by strongly reduced chemical constituents, with BM providing more humic-like OM precursors than RM. Inclusion of a pine-based biochar in cattle diets to generate BM is consistent with current trends in the circular economy, "closing the loop" in agricultural supply chains by returning C-rich organic amendments to croplands. Stockpiling/composting the resulting BM, however, may not provide a clear advantage over directly mixing low levels of biochar with manure. Further research is required to validate BM as a tool to reduce the C footprint of livestock waste management.

Organic matter- and temperature-driven deterministic assembly processes govern bacterial community composition and functionality during manure composting

Although many studies have shown that microbial communities play important roles in organic waste composting due to the involvement of specific microbial taxa with metabolic functions, the underlying ecological processes of community assembly and governing factors remain elusive. Thus, a chicken manure composting experiment as a model system of microbially mediated organic waste composting was conducted. Ecological null modeling and metabolic functional prediction combined with electrospray ionization (ESI) Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) were used to quantify assembly processes governing bacterial community composition and functions during composting. The results showed the predominant role of deterministic assembly processes in shifting community compositions both across and within composting stages. Stochastic assembly processes also concomitantly influenced microbial community compositions. Changes in the organic matter (OM) content and its chemical properties and temperature governed bacterial community assembly processes throughout the stages by selecting specific bacterial taxa such as Cardiobacteriales, Bacteroidales, and Lachnospiraceae on day 1, Firmicutes on days 6, 25 and 37, and Sphingobacteriales, Thermoactinomycetaceae, Actinobacteria, and Novibacillus on day 45. These taxa ultimately influenced community functions such as environmental information processing, carbohydrate and amino acid metabolism, cellular processes, and genetic information processes involved in composting. Taken together, this study indicates that deterministic assembly processes governed by OM content and quality as well as temperature influenced microbial community turnover and determined community functions during composting. These results are important for better understanding and predicting microbial-driven composting and for ultimately manipulating microorganisms for environmentally-friendly composting outcomes.

Specification of complex-PAHs in coal fire sponges (CFS) by high-resolution mass spectrometry with electrospray ionization

Underground coal fires are considered an ecological disaster. While underground coal fires are prevalent in coal-producing areas throughout the world, they are most problematic in northern China. Previous studies have shown that underground coal fires stimulate the formation of cracks or gas outlets on the surface, as well as coal fire sponges (CFS) on the soil layer surface, which collect coal-fired pollutants. Herein, ultra-high-performance liquid chromatography (UHPLC) was used in conjunction with electrospray ionization (ESI) high-resolution mass spectrometry to analyze CFS samples collected from the No. 8 fire zone, located in Wuda coalfield, Inner Mongolia, China. The results show that CFS contain 233 oxy-substituted polycyclic aromatic hydrocarbons (O-PAHs), e.g., naphthaldehyde; 40 oxapolycyclic aromatic hydrocarbons (OPAHs), e.g., dibenzofuran; 40 alkyl-substituted polycyclic aromatic hydrocarbons (R-PAHs); and 11 parent polycyclic aromatic hydrocarbons (PPAHs). Thus, CFS are primarily composed of O-PAHs, which are 25 times and 5 times more prevalent than PPAHs and R-PAHs, respectively. As such, a high relative abundance of varied O-PAHs are discharged from underground coal fires, which is significantly different from what is released during industrial coal burning. Owing to their water solubility and condensability, the new facts disclosed in this paper may provide a new perspective for understanding complex organic pollutants from underground coal fires and their environmental impacts.