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For: Doerfler W, Toth M, Kochanek S, Achten S, Freisem-Rabien U, Behn-Krappa A, Orend G. Eukaryotic DNA methylation: facts and problems. FEBS Lett 1990;268:329-33. [PMID: 2200712 DOI: 10.1016/0014-5793(90)81280-2] [Citation(s) in RCA: 49] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Number Cited by Other Article(s)
1
Liu L, Ju M, Hu Y, Luan C, Zhang J, Chen K. Genome-wide DNA methylation and transcription analysis in psoriatic epidermis. Epigenomics 2023;15:209-226. [PMID: 37158398 DOI: 10.2217/epi-2022-0458] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]  Open
2
Larkin J, Goh XY, Vetter M, Pickering L, Swanton C. Epigenetic regulation in RCC: opportunities for therapeutic intervention? Nat Rev Urol 2012;9:147-55. [DOI: 10.1038/nrurol.2011.236] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
3
Raghavan K, Ruskin HJ, Perrin D, Goasmat F, Burns J. Computational micromodel for epigenetic mechanisms. PLoS One 2010;5:e14031. [PMID: 21152421 PMCID: PMC2994705 DOI: 10.1371/journal.pone.0014031] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2010] [Accepted: 10/26/2010] [Indexed: 11/19/2022]  Open
4
Discovery of DNA methylation markers in cervical cancer using relaxation ranking. BMC Med Genomics 2008;1:57. [PMID: 19025626 PMCID: PMC2605750 DOI: 10.1186/1755-8794-1-57] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2008] [Accepted: 11/24/2008] [Indexed: 01/22/2023]  Open
5
Ongenaert M, Van Neste L, De Meyer T, Menschaert G, Bekaert S, Van Criekinge W. PubMeth: a cancer methylation database combining text-mining and expert annotation. Nucleic Acids Res 2007;36:D842-6. [PMID: 17932060 PMCID: PMC2238841 DOI: 10.1093/nar/gkm788] [Citation(s) in RCA: 118] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]  Open
6
Volpe P. The language of methylation in genomics of eukaryotes. BIOCHEMISTRY (MOSCOW) 2005;70:584-95. [PMID: 15948712 DOI: 10.1007/s10541-005-0152-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
7
Kumar RC, Thakur MK. Androgen receptor mRNA is inversely regulated by testosterone and estradiol in adult mouse brain. Neurobiol Aging 2004;25:925-33. [PMID: 15212846 DOI: 10.1016/j.neurobiolaging.2003.10.011] [Citation(s) in RCA: 54] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2003] [Revised: 09/29/2003] [Accepted: 10/06/2003] [Indexed: 11/20/2022]
8
Nishizawa Y, Yamamoto T, Tanigaki Y, Kasugai T, Mano M, Ishiguro S, Fushiki S, Poirier LA, Nishizawa Y. Methylcobalamin decreases mRNA levels of androgen-induced growth factor in androgen-dependent Shionogi carcinoma 115 cells. Nutr Cancer 2000;35:195-201. [PMID: 10693175 DOI: 10.1207/s15327914nc352_15] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]
9
Salamon D, Takacs M, Myöhänen S, Marcsek Z, Berencsi G, Minarovits J. De novo DNA methylation at nonrandom founder sites 5' from an unmethylated minimal origin of DNA replication in latent Epstein-Barr virus genomes. Biol Chem 2000;381:95-105. [PMID: 10746740 DOI: 10.1515/bc.2000.014] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
10
Soares J, Pinto AE, Cunha CV, Andr� S, Bar�o I, Sousa JM, Cravo M. Global DNA hypomethylation in breast carcinoma. Cancer 1999. [DOI: 10.1002/(sici)1097-0142(19990101)85:1%3c112::aid-cncr16%3e3.0.co;2-t] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
11
Soares J, Pinto AE, Cunha CV, Andr� S, Bar�o I, Sousa JM, Cravo M. Global DNA hypomethylation in breast carcinoma. Cancer 1999. [DOI: 10.1002/(sici)1097-0142(19990101)85:1<112::aid-cncr16>3.0.co;2-t] [Citation(s) in RCA: 125] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
12
Ryhänen S, Pirskanen A, Jääskeläinen T, Mäenpää PH. State of methylation of the human osteocalcin gene in bone-derived and other types of cells. J Cell Biochem 1997;66:404-12. [PMID: 9257196 DOI: 10.1002/(sici)1097-4644(19970901)66:3<404::aid-jcb12>3.0.co;2-e] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
13
Fang JY, Xiao SD, Zhu SS, Yuan JM, Qiu DK, Jiang SJ. Relationship of plasma folic acid and status of DNA methylation in human gastric cancer. J Gastroenterol 1997;32:171-5. [PMID: 9085163 DOI: 10.1007/bf02936363] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
14
Cravo M, Glória L, Camilo M, Resende M, Cardoso JN, Leitão CN, Mira FC. DNA methylation and subclinical vitamin deficiency of folate, pyridoxal-phosphate and vitamin B12 in chronic alcoholics. Clin Nutr 1997. [DOI: 10.1016/s0261-5614(97)80256-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
15
Tawa R, Takami M, Imakura Y, Lee KH, Sakurai H. Effects of CpG methylation to double stranded DNA breaks by Cu(II)-podophyllotoxin derivative complexes. Bioorg Med Chem Lett 1997. [DOI: 10.1016/s0960-894x(97)00015-2] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
16
Fang JY, Zhu SS, Xiao SD, Jiang SJ, Shi Y, Chen XY, Zhou XM, Qian LF. Studies on the hypomethylation of c-myc, c-Ha-ras oncogenes and histopathological changes in human gastric carcinoma. J Gastroenterol Hepatol 1996;11:1079-82. [PMID: 8985834 DOI: 10.1111/j.1440-1746.1996.tb00040.x] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
17
Cravo M, Pinto R, Fidalgo P, Chaves P, Glória L, Nobre-Leitão C, Costa Mira F. Global DNA hypomethylation occurs in the early stages of intestinal type gastric carcinoma. Gut 1996;39:434-8. [PMID: 8949650 PMCID: PMC1383352 DOI: 10.1136/gut.39.3.434] [Citation(s) in RCA: 74] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
18
Cai Q, Guy CL, Moore GA. Detection of cytosine methylation and mapping of a gene influencing cytosine methylation in the genome of Citrus. Genome 1996;39:235-42. [PMID: 8984000 DOI: 10.1139/g96-032] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
19
Tollefsbol TO, Hutchison CA. Mammalian DNA (cytosine-5-)-methyltransferase expressed in Escherichia coli, purified and characterized. J Biol Chem 1995;270:18543-50. [PMID: 7629184 DOI: 10.1074/jbc.270.31.18543] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]  Open
20
Laayoun A, Smith SS. Methylation of slipped duplexes, snapbacks and cruciforms by human DNA(cytosine-5)methyltransferase. Nucleic Acids Res 1995;23:1584-9. [PMID: 7784214 PMCID: PMC306901 DOI: 10.1093/nar/23.9.1584] [Citation(s) in RCA: 41] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]  Open
21
Kim YI, Giuliano A, Hatch KD, Schneider A, Nour MA, Dallal GE, Selhub J, Mason JB. Global DNA hypomethylation increases progressively in cervical dysplasia and carcinoma. Cancer 1994;74:893-9. [PMID: 8039116 DOI: 10.1002/1097-0142(19940801)74:3<893::aid-cncr2820740316>3.0.co;2-b] [Citation(s) in RCA: 140] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
22
Duvic M, Nelson DC, Annarella M, Cho M, Esgleyes-Ribot T, Remenyik E, Ulmer R, Rapini RP, Sacks PG, Clayman GL. Keratinocyte transglutaminase expression varies in squamous cell carcinomas. J Invest Dermatol 1994;102:462-9. [PMID: 7908683 DOI: 10.1111/1523-1747.ep12373021] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
23
Weitzman SA, Turk PW, Milkowski DH, Kozlowski K. Free radical adducts induce alterations in DNA cytosine methylation. Proc Natl Acad Sci U S A 1994;91:1261-4. [PMID: 8108398 PMCID: PMC43137 DOI: 10.1073/pnas.91.4.1261] [Citation(s) in RCA: 194] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]  Open
24
Folate, alcohol, methionine, and colon cancer risk: is there a unifying theme? Nutr Rev 1994;52:18-20. [PMID: 8139796 DOI: 10.1111/j.1753-4887.1994.tb01349.x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]  Open
25
Modifications and Conformations of DNA and Nuclear Proteins. Mol Endocrinol 1994. [DOI: 10.1016/b978-0-12-111231-8.50018-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]  Open
26
Englander E, Wolffe A, Howard B. Nucleosome interactions with a human Alu element. Transcriptional repression and effects of template methylation. J Biol Chem 1993. [DOI: 10.1016/s0021-9258(19)36553-6] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]  Open
27
Tollefsbol TO, Andrews LG. Mechanisms for methylation-mediated gene silencing and aging. Med Hypotheses 1993;41:83-92. [PMID: 8231986 DOI: 10.1016/0306-9877(93)90040-w] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
28
Kirkness E, Fraser C. A strong promoter element is located between alternative exons of a gene encoding the human gamma-aminobutyric acid-type A receptor beta 3 subunit (GABRB3). J Biol Chem 1993. [DOI: 10.1016/s0021-9258(18)53626-7] [Citation(s) in RCA: 45] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]  Open
29
Bednarik DP. DNA methylation and retrovirus expression. EXS 1993;64:300-329. [PMID: 8380351 DOI: 10.1007/978-3-0348-9118-9_13] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
30
Doerfler W. Patterns of de novo DNA methylation and promoter inhibition: studies on the adenovirus and the human genomes. EXS 1993;64:262-99. [PMID: 8418951 DOI: 10.1007/978-3-0348-9118-9_12] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
31
Adams RL, Lindsay H, Reale A, Seivwright C, Kass S, Cummings M, Houlston C. Regulation of de novo methylation. EXS 1993;64:120-44. [PMID: 8418947 DOI: 10.1007/978-3-0348-9118-9_6] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
32
Ayliffe MA, Timmis JN. Tobacco nuclear DNA contains long tracts of homology to chloroplast DNA. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 1992;85:229-238. [PMID: 24197309 DOI: 10.1007/bf00222864] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/1992] [Accepted: 04/07/1992] [Indexed: 06/02/2023]
33
Loennechen T, Nilsen IW, Moens U, Andersen A, Aarbakke J. Is there an association between an increase in c-myc RNA steady state levels and c-myc methylation in HL-60 cells treated with 3-deaza-(+/-)-aristeromycin, an indirect inhibitor of methylation? Biochem Pharmacol 1992;44:1283-9. [PMID: 1417952 DOI: 10.1016/0006-2952(92)90527-p] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
34
Extrachromosomal homologous DNA recombination in plant cells is fast and is not affected by CpG methylation. Mol Cell Biol 1992. [PMID: 1630452 DOI: 10.1128/mcb.12.8.3372] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
35
Puchta H, Kocher S, Hohn B. Extrachromosomal homologous DNA recombination in plant cells is fast and is not affected by CpG methylation. Mol Cell Biol 1992;12:3372-9. [PMID: 1630452 PMCID: PMC364585 DOI: 10.1128/mcb.12.8.3372-3379.1992] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]  Open
36
Renckens S, De Greve H, Van Montagu M, Hernalsteens JP. Petunia plants escape from negative selection against a transgene by silencing the foreign DNA via methylation. MOLECULAR & GENERAL GENETICS : MGG 1992;233:53-64. [PMID: 1376407 DOI: 10.1007/bf00587561] [Citation(s) in RCA: 46] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
37
Doerfler W. DNA methylation: eukaryotic defense against the transcription of foreign genes? Microb Pathog 1992;12:1-8. [PMID: 1560750 DOI: 10.1016/0882-4010(92)90060-2] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
38
Wahlfors J. Certain changes in ornithine decarboxylase gene methylation accompany gene amplification. Biochem J 1991;279 ( Pt 2):435-40. [PMID: 1719956 PMCID: PMC1151623 DOI: 10.1042/bj2790435] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
39
Behn-Krappa A, Hölker I, Sandaradura de Silva U, Doerfler W. Patterns of DNA methylation are indistinguishable in different individuals over a wide range of human DNA sequences. Genomics 1991;11:1-7. [PMID: 1722485 DOI: 10.1016/0888-7543(91)90095-v] [Citation(s) in RCA: 28] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
40
Jänne J, Alhonen L, Leinonen P. Polyamines: from molecular biology to clinical applications. Ann Med 1991;23:241-59. [PMID: 1930914 DOI: 10.3109/07853899109148056] [Citation(s) in RCA: 269] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]  Open
41
Matzke MA, Matzke AJ. Differential inactivation and methylation of a transgene in plants by two suppressor loci containing homologous sequences. PLANT MOLECULAR BIOLOGY 1991;16:821-30. [PMID: 1650257 DOI: 10.1007/bf00015074] [Citation(s) in RCA: 51] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
42
Pawlak A, Bryans M, Jost JP. An avian 40 KDa nucleoprotein binds preferentially to a promoter sequence containing one single pair of methylated CpG. Nucleic Acids Res 1991;19:1029-34. [PMID: 2020543 PMCID: PMC333776 DOI: 10.1093/nar/19.5.1029] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]  Open
43
Takeuchi H, Hanamura N, Hayasaka H, Harada I. B-Z transition of poly(dG-m5dC) induced by binding of Lys-containing peptides. FEBS Lett 1991;279:253-5. [PMID: 1900472 DOI: 10.1016/0014-5793(91)80161-u] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
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