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Arshad JZ, Tabassum S, Kiani MS, Arshad S, Hashmi MA, Majeed I, Ali H, Shah SSA. Anticancer Properties of Ru and Os Half-Sandwich Complexes of N,S Bidentate Schiff Base Ligands Derived from Phenylthiocarbamide. Chem Asian J 2023; 18:e202300804. [PMID: 37737043 DOI: 10.1002/asia.202300804] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2023] [Accepted: 09/20/2023] [Indexed: 09/23/2023]
Abstract
The versatile coordinating nature of N,S bidentate ligands is of great importance in medicinal chemistry imparting stability and enhancing biological properties of the metal complexes. Phenylthiocarbamide-based N,S donor Schiff bases converted into RuII /OsII (cymene) complexes and characterized by spectroscopic techniques and elemental analysis. The hydrolytic stability of metal complexes to undergo metal-halide ligand exchange reaction was confirmed both by the DFT and NMR experimentation. The ONIOM (QM/MM) study confirmed the histone protein targeting nature of aqua/hydroxido complex 2 aH with an excellent binding energy of -103.19 kcal/mol. The antiproliferative activity against a panel of cancer cells A549, MCF-7, PC-3, and HepG2 revealed that ruthenium complexes 1 a-3 a were more cytotoxic than osmium complexes and their respective ligands 1-3 as well. Among these ruthenium cymene complex bearing sulfonamide moiety 2 a proved a strong cytotoxic agent and showed excellent correlation of cellular accumulation, lipophilicity, and drug-likeness to the anticancer activity. Moreover, the favorable physiochemical properties such as bioavailability and gastrointestinal absorption of ligand 2 also supported the development of Ru complex 2 a as an orally active anticancer metallodrug.
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Affiliation(s)
- Jahan Zaib Arshad
- Department of Chemistry, Government College, Women University Sialkot, Kutchehry Road, Sialkot, Pakistan
| | - Sana Tabassum
- Department of Chemistry, Government College, Women University Sialkot, Kutchehry Road, Sialkot, Pakistan
| | - Muhammad Shaheer Kiani
- Department of Chemistry, Division of Science & Technology, University of Education, 54770, Lahore, Pakistan
| | - Sundas Arshad
- Department of Chemistry, Government College, Women University Sialkot, Kutchehry Road, Sialkot, Pakistan
| | - Muhammad Ali Hashmi
- Department of Chemistry, Division of Science & Technology, University of Education, 54770, Lahore, Pakistan
| | - Imran Majeed
- Department of Chemistry, Quaid-i-Azam University, Islamabad, Pakistan
| | - Hassan Ali
- Department of Chemistry, School of Natural Sciences, National University of Science and Technology H-12 Islamabad, Islamabad, 44000, Pakistan
| | - Syed Shoaib Ahmad Shah
- Department of Chemistry, School of Natural Sciences, National University of Science and Technology H-12 Islamabad, Islamabad, 44000, Pakistan
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2
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Gregorc J, Lensen N, Chaume G, Iskra J, Brigaud T. Trifluoromethylthiolation of Tryptophan and Tyrosine Derivatives: A Tool for Enhancing the Local Hydrophobicity of Peptides. J Org Chem 2023; 88:13169-13177. [PMID: 37672679 PMCID: PMC10507666 DOI: 10.1021/acs.joc.3c01373] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Indexed: 09/08/2023]
Abstract
The incorporation of fluorinated groups into peptides significantly affects their biophysical properties. We report herein the synthesis of Fmoc-protected trifluoromethylthiolated tyrosine (CF3S-Tyr) and tryptophan (CF3S-Trp) analogues on a gram scale (77-93% yield) and demonstrate their use as highly hydrophobic fluorinated building blocks for peptide chemistry. The developed methodology was successfully applied to the late-stage regioselective trifluoromethylthiolation of Trp residues in short peptides (66-80% yield) and the synthesis of various CF3S-analogues of biologically active monoamines. To prove the concept, Fmoc-(CF3S)Tyr and -Trp were incorporated into the endomorphin-1 chain (EM-1) and into model tripeptides by solid-phase peptide synthesis. A remarkable enhancement of the local hydrophobicity of the trifluoromethylthiolated peptides was quantified by the chromatographic hydrophobicity index determination method, demonstrating the high potential of CF3S-containing amino acids for the rational design of bioactive peptides.
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Affiliation(s)
- Jure Gregorc
- Chair
of Organic Chemistry, Faculty of Chemistry and Chemical Technology, University of Ljubljana, Večna pot 113, Ljubljana 1000, Slovenia
- CY
Cergy Paris Université, CNRS, BioCIS, Cergy Pontoise 95000, France
- Université
Paris-Saclay, CNRS, BioCIS, Orsay 91400, France
| | - Nathalie Lensen
- CY
Cergy Paris Université, CNRS, BioCIS, Cergy Pontoise 95000, France
- Université
Paris-Saclay, CNRS, BioCIS, Orsay 91400, France
| | - Grégory Chaume
- CY
Cergy Paris Université, CNRS, BioCIS, Cergy Pontoise 95000, France
- Université
Paris-Saclay, CNRS, BioCIS, Orsay 91400, France
| | - Jernej Iskra
- Chair
of Organic Chemistry, Faculty of Chemistry and Chemical Technology, University of Ljubljana, Večna pot 113, Ljubljana 1000, Slovenia
| | - Thierry Brigaud
- CY
Cergy Paris Université, CNRS, BioCIS, Cergy Pontoise 95000, France
- Université
Paris-Saclay, CNRS, BioCIS, Orsay 91400, France
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3
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Carotti A, Varfaj I, Pruscini I, Abualzulof GWA, Mercolini L, Bianconi E, Macchiarulo A, Camaioni E, Sardella R. Estimating the hydrophobicity extent of molecular fragments using reversed-phase liquid chromatography. J Sep Sci 2023; 46:e2300346. [PMID: 37438993 DOI: 10.1002/jssc.202300346] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2023] [Revised: 06/30/2023] [Accepted: 07/02/2023] [Indexed: 07/14/2023]
Abstract
A fast HPLC method was developed to study the hydrophobicity extent of pharmaceutically relevant molecular fragments. By this strategy, the reduced amount of sample available for physico-chemical evaluations in early-phase drug discovery programs does not represent a limiting factor. The sixteen acid fragments investigated were previously synthesized also determining potentiometrically their experimental log D values. For four fragments it was not possible to determine such property since their values were outside of the instrumental working range (2 < pKa < 12). An RP-HPLC method was therefore optimized. For each scrutinized method, some derived chromatographic indices were calculated, and Pearson's correlation coefficient (r) allowed to select the so-called "φ0 index" as the best correlating with the log D. Thew s p H ${}_w^spH$ was fixed at 3.5 and a modification of some variables [organic modifier (methanol vs. ACN), stationary phase (octyl vs. octadecyl), presence/absence of the additives n-octanol, n-butylamine, and n-octylamine], allowed to select the best correlation conditions, producing a r = 0.94 (p < 0.001). Importantly, the φ0 index enabled the estimation of log D values for four fragments which were unattainable by potentiometric titration. Moreover, a series of molecular descriptors were calculated to identify the chemical characteristics of the fragments explaining the obtained φ0 . The number of hydrogen bond donors and the index of cohesive interaction correlated with the experimental data.
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Affiliation(s)
- Andrea Carotti
- Department of Pharmaceutical Sciences, Via Fabretti 48, University of Perugia, Perugia, Italy
| | - Ina Varfaj
- Department of Pharmaceutical Sciences, Via Fabretti 48, University of Perugia, Perugia, Italy
| | - Ilaria Pruscini
- Department of Pharmaceutical Sciences, Via Fabretti 48, University of Perugia, Perugia, Italy
| | - Ghaid W A Abualzulof
- Department of Pharmaceutical Sciences, Via Fabretti 48, University of Perugia, Perugia, Italy
| | - Laura Mercolini
- Department of Pharmacy and Biotechnology (FaBiT), Alma Mater Studiorum - Via Belmeloro 6, University of Bologna, Bologna, Italy
| | - Elisa Bianconi
- Department of Pharmaceutical Sciences, Via Fabretti 48, University of Perugia, Perugia, Italy
| | - Antonio Macchiarulo
- Department of Pharmaceutical Sciences, Via Fabretti 48, University of Perugia, Perugia, Italy
| | - Emidio Camaioni
- Department of Pharmaceutical Sciences, Via Fabretti 48, University of Perugia, Perugia, Italy
| | - Roccaldo Sardella
- Department of Pharmaceutical Sciences, Via Fabretti 48, University of Perugia, Perugia, Italy
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4
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Dobričić V, Savić J, Tomašič T, Durcik M, Zidar N, Mašič LP, Ilaš J, Kikelj D, Čudina O. High-performance liquid chromatography evaluation of lipophilicity and QSRR modeling of a series of dual DNA gyrase and topoisomerase IV inhibitors. ACTA CHROMATOGR 2022. [DOI: 10.1556/1326.2022.01096] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/07/2022]
Abstract
AbstractBacterial DNA gyrase and topoisomerase IV control the topological state of DNA during replication and represent important antibacterial drug targets. To be successful as drug candidates, newly synthesized compounds must possess optimal lipophilicity, which enables efficient delivery to the site of action. In this study, retention behavior of twenty-three previously synthesized dual DNA gyrase and topoisomerase IV inhibitors was tested in RP-HPLC system, consisting of C8 column and acetonitrile/phosphate buffer (pH 5.5 and pH 7.4) mobile phase. logD was calculated at both pH values and the best correlation with logD was obtained for retention parameter φ0, indicating that this RP-HPLC system could be used as an alternative to the shake-flask determination of lipophilicity. Subsequent QSRR analysis revealed that intrinsic lipophilicity (logP) and molecular weight (bcutm13) have a positive, while solubility (bcutp3) has a negative influence on this retention parameter.
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Affiliation(s)
- Vladimir Dobričić
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Belgrade, Vojvode Stepe 450, 11000 Belgrade, Serbia
| | - Jelena Savić
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Belgrade, Vojvode Stepe 450, 11000 Belgrade, Serbia
| | - Tihomir Tomašič
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Ljubljana, Aškerčeva cesta 7, 1000 Ljubljana, Slovenia
| | - Martina Durcik
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Ljubljana, Aškerčeva cesta 7, 1000 Ljubljana, Slovenia
| | - Nace Zidar
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Ljubljana, Aškerčeva cesta 7, 1000 Ljubljana, Slovenia
| | - Lucija Peterlin Mašič
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Ljubljana, Aškerčeva cesta 7, 1000 Ljubljana, Slovenia
| | - Janez Ilaš
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Ljubljana, Aškerčeva cesta 7, 1000 Ljubljana, Slovenia
| | - Danijel Kikelj
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Ljubljana, Aškerčeva cesta 7, 1000 Ljubljana, Slovenia
| | - Olivera Čudina
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Belgrade, Vojvode Stepe 450, 11000 Belgrade, Serbia
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5
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Solvent strength of organic phase for two biphasic solvent systems in high speed countercurrent chromatography. J Chromatogr A 2022; 1680:463422. [PMID: 36037578 DOI: 10.1016/j.chroma.2022.463422] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2022] [Revised: 08/10/2022] [Accepted: 08/12/2022] [Indexed: 11/21/2022]
Abstract
In this work, relationships between solvent strength of organic phase (ψ) for two biphasic solvent systems in high speed countercurrent chromatography, hexane-ethyl-acetate-methanol-water (HEMWat) and ethyl acetate-n-butanol-water (EBuWat), and partition coefficient (K) were investigated using four retention models, including Jandera's model (ABM), Neue-Kuss model (NK), linear-solvent-strength model (LSS) and quadratic-solvent-strength model (QSS). Experimental results showed that ABM model had the best fitting results for HEMWat system while NK model and QSS model had good fitting results in EBuWat system. Thus, a mathematical relationship between partition coefficient (K) and solvent strength of organic phase (ψ) could be obtained by measurement of partition coefficients of the target compounds with three different volume ratios of organic phase. At the same time, a functional map was proposed to construct to get a maneuverable region so that an optimal two-phase solvent system for separation of a target compound could be selected easily, which saved a lot of manpower for high speed countercurrent chromatographic separation. The application of this new method was declared by successful separation of two components, apigenin-6-C-β-D-xylopyranosyl-8-C-α-L-arabinopyranoside and vicenin-3, from dried leaves of Dendrobium officinale Kimura et Migo using high speed countercurrent chromatography.
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6
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Poole CF, Atapattu SN. Analysis of the solvent strength parameter (linear solvent strength model) for isocratic separations in reversed-phase liquid chromatography. J Chromatogr A 2022; 1675:463153. [DOI: 10.1016/j.chroma.2022.463153] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2022] [Revised: 05/12/2022] [Accepted: 05/15/2022] [Indexed: 10/18/2022]
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7
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Kubickova V, Racova Z, Strojil J, Santavy P, Urbanek K. Separation of ampicillin on polar-endcapped phase: Development of the HPLC method to achieve its correct dosage in cardiac surgery. ACTA CHROMATOGR 2022. [DOI: 10.1556/1326.2021.00957] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Abstract
The accurate, simple, and selective reversed phase high performance liquid chromatography (RP-HPLC) has been established and validated for the determination of an antibiotic ampicillin (AMP) in human blood plasma. The SPE extraction was used for the sample preparation. Chromatographic separation was accomplished by a mobile phase containing 15 mM monopotassium phosphate solution of pH 3.3 and methanol (75:25, v/v) in an isocratic mode at a flow rate of 1.4 mL min−1 at 30 °C. The separation was evaluated on a column with a new polar-endcapped C18 stationary phase Arion® Polar C18 or well-known phase Luna® Omega Polar C18. Excellent linearity (R
2 0.9998) was shown over range 10–300 mg L−1 with mean percentage recovery 90%. Peak shapes were symmetrical in both columns, Arion® Polar C18 and Luna® Omega Polar C18, with asymmetry factor of 1.0 and 1.4, tailing factor of 1.0 and 1.2, and retention factor of 4.6 and 5.6, respectively. The Arion® Polar C18 was almost 1.4-fold more effective than Luna® Omega Polar C18 phase. The LOQ for ampicillin was achieved 10 mg L−1 for Luna® Omega Polar C18 and 5 mg L−1 for Arion® Polar C18 using 20 µL of a solution containing 0.24 mg mL−1 of cephalexin as an internal standard.
A number of articles dealing with the determination of ampicillin is limited, therefore, this study showed the HPLC method suitable for the determination of AMP in human blood plasma from patient who underwent elective cardiac surgical revascularization. In addition, the determination of AMP was also performed for the first time using an Arion® Polar C18 column, which effectively separated AMP from other compounds present in human blood plasma. This new polar-endcapped phase can help in separation of polar antibiotics or other polar compounds, which are unsuccessfully separated on conventional C18 column, and thus can help during method development.
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Affiliation(s)
- Vendula Kubickova
- Department of Pharmacology, Faculty of Medicine and Dentistry, Palacky University Olomouc, Olomouc, Czech Republic
| | - Zuzana Racova
- Department of Pharmacology, Faculty of Medicine and Dentistry, Palacky University Olomouc, Olomouc, Czech Republic
| | - Jan Strojil
- Department of Pharmacology, Faculty of Medicine and Dentistry, Palacky University Olomouc, Olomouc, Czech Republic
| | - Petr Santavy
- Department of Cardiac Surgery, University Hospital Olomouc, Olomouc, Czech Republic
| | - Karel Urbanek
- Department of Pharmacology, Faculty of Medicine and Dentistry, Palacky University Olomouc, Olomouc, Czech Republic
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8
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Angelov T. HPLC determination of pKa value of benfotiamine. J LIQ CHROMATOGR R T 2021. [DOI: 10.1080/10826076.2021.2016443] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- T. Angelov
- Faculty of Pharmacy, Medical University of Pleven, Pleven, Bulgaria
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9
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Flieger J, Orzeł A, Kowalska-Kępczyńska A, Pizoń M, Trębacz H, Majerek D, Plech T, Płaziński W. Teicoplanin-Modified HPLC Column as a Source of Experimental Parameters for Prediction of the Anticonvulsant Activity of 1,2,4-Triazole-3-Thiones by the Regression Models. MATERIALS (BASEL, SWITZERLAND) 2020; 13:E2650. [PMID: 32532041 PMCID: PMC7321613 DOI: 10.3390/ma13112650] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/02/2020] [Revised: 05/27/2020] [Accepted: 05/29/2020] [Indexed: 11/16/2022]
Abstract
The cell membrane is a complex system that consists of lipids, proteins, polysaccharides, and amphiphilic phospholipids. It plays an important role in ADME processes that are responsible for the final pharmaceutical effects of xenobiotics (bioavailability, activity). To study drug-membrane interaction at the molecular level, several high-performance liquid chromatography (HPLC) membrane model systems have been proposed which are mimicking mainly its lipid character. The aim of this work was to study interactions of new synthesized antiepileptic compounds of 4-alkyl-5-(3-chlorophenyl)-2,4-dihydro-3H-1,2,4-triazole-3-thione derivatives with Chirobiotic column containing glycoprotein ligand attached to the silica matrix. The affinity of the analytes to immobilized glycoprotein ligand was examined chromatographically in reversed-phase mode. The thermodynamics of interactions between bioactive compounds and teicoplanin was studied in terms of the van't Hoff linear relationship ln k vs. 1/T in the range of 5-45 °C. Change in enthalpy (ΔH°), change in entropy (ΔS°) and change in Gibbs free energy (ΔG°) were estimated utilizing graphical extrapolation and interpolation methods. The density functional theory (DFT) approach and docking simulations were used to get the molecular interpretation and prove the obtained experimental results. Cross-correlations of chromatographic and thermodynamic parameters with non-empirical topological and quantum chemical indices suggest that the polarizability of analytes appears to be responsible for the interactions of the tested molecules with teicoplanin and, ultimately, their retention on the column. Experimental and theoretical parameters were subjected to statistical analysis using regression models. Partial least squares (PLS) regression model showed the usefulness of the experimentally measured parameter φ0 (MeOH) to discriminate between anticonvulsant active and inactive 1,2,4-triazole-3-thione derivatives. Obtained results point out the usefulness of interaction of potential anticonvulsants with glycoprotein class of compounds to anticipate their activity.
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Affiliation(s)
- Jolanta Flieger
- Department of Analytical Chemistry, Medical University of Lublin, Chodźki 4a, 20-093 Lublin, Poland;
| | - Anna Orzeł
- Faculty of Medicine, Medical University of Lublin, Aleje Racławickie 1, 20-059 Lublin, Poland;
| | - Anna Kowalska-Kępczyńska
- Department of Biochemical Diagnostics, Medical University of Lublin, Staszica 16, 20-081 Lublin, Poland;
| | - Magdalena Pizoń
- Department of Analytical Chemistry, Medical University of Lublin, Chodźki 4a, 20-093 Lublin, Poland;
| | - Hanna Trębacz
- Chair and Department of Biophysics, Medical University of Lublin, Jaczewskiego 4, 20-090 Lublin, Poland;
| | - Dariusz Majerek
- Department of Applied Mathematics, University of Technology, Nadbystrzycka 38D, 20-618 Lublin, Poland;
| | - Tomasz Plech
- Department of Pharmacology, Faculty of Nursing and Health Sciences, Medical University of Lublin, Chodźki 4a, 20-093 Lublin, Poland;
| | - Wojciech Płaziński
- Jerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, Niezapominajek 8, 30-239 Krakow, Poland;
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Wang Y, Luo C, Yang M, Ren J, Wang W, Yong L, Gao G, Ren L, Xiaoli Z. Target quantification and semi-target screening of halogenated carboxylic acids in drinking water using ultra-high performance liquid chromatography-quadrupole orbitrap high-resolution mass spectrometry. J Chromatogr A 2020; 1614:460710. [DOI: 10.1016/j.chroma.2019.460710] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2019] [Revised: 11/12/2019] [Accepted: 11/13/2019] [Indexed: 11/25/2022]
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Elmansi H, Nasr JJ, Rageh AH, El-Awady MI, Hassan GS, Abdel-Aziz HA, Belal F. Assessment of lipophilicity of newly synthesized celecoxib analogues using reversed-phase HPLC. BMC Chem 2019; 13:84. [PMID: 31384831 PMCID: PMC6661952 DOI: 10.1186/s13065-019-0607-6] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2019] [Accepted: 06/29/2019] [Indexed: 11/16/2022] Open
Abstract
BACKGROUND Lipophilicity is a physicochemical property of an essential importance in medicinal chemistry; therefore, fast and reliable measurement of lipophilicity will affect greatly the drug discovery process. RESULTS A series of N-benzenesulfonamide-1H-pyrazoles, oximes and hydrazones as celecoxib analogues was investigated with regard to their retention behavior using reversed-phase high performance liquid chromatography (RP-HPLC). The mobile phases employed for this study consist of a mixture of water and methanol in different proportions. In addition, the stationary phase utilized for this separation was C18 silanized silica gel and using 200 nm as a detection wavelength. The retention behavior of the investigated compounds was determined based on practical determination of log k at different concentrations of methanol (as an organic modifier) in the mobile phase ranging from 60 to 80%. It was observed that the retention of these compounds (expressed as log k) decreased in a linear manner with increasing the concentration of methanol. High correlation coefficients (more than 0.90 in most cases) were obtained for the relationship between the volume fraction of the organic solvent and the retention values represented as log k w. A comparative evaluation was carried out between chromatographically-obtained lipophilicity parameters (represented as lipophilicity chromatographic index log k w or isocratic chromatographic hydrophobicity index, φ 0) and the computationally calculated log P values (miLogP, ALOGP, ACD/Labs and ALOGPs). CONCLUSION It was found that a good correlation exists between the experimental and computed log P values. In the future, these results can give a deep insight about the anti-inflammatory and analgesic activity of the newly synthesized compounds.
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Affiliation(s)
- Heba Elmansi
- Department of Pharmaceutical Analytical Chemistry, Faculty of Pharmacy, Mansoura University, Mansoura, 35516 Egypt
| | - Jenny Jeehan Nasr
- Department of Pharmaceutical Analytical Chemistry, Faculty of Pharmacy, Mansoura University, Mansoura, 35516 Egypt
| | - Azza H. Rageh
- Department of Pharmaceutical Analytical Chemistry, Faculty of Pharmacy, Assiut University, Assiut, 71526 Egypt
| | - Mohamed I. El-Awady
- Department of Pharmaceutical Analytical Chemistry, Faculty of Pharmacy, Mansoura University, Mansoura, 35516 Egypt
| | - Ghada S. Hassan
- Department of Medicinal Chemistry, Faculty of Pharmacy, Mansoura University, Mansoura, 35516 Egypt
| | - Hatem A. Abdel-Aziz
- Department of Applied Organic Chemistry, National Research Centre, Dokki, 12622 Egypt
| | - Fathalla Belal
- Department of Pharmaceutical Analytical Chemistry, Faculty of Pharmacy, Mansoura University, Mansoura, 35516 Egypt
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12
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Ilić M, Ačanski M, Pastor K, Popović L, Jovanović-Šanta S. New challenge in the lipophilicity determination and separation of biologically active 16,17-secoesterone derivatives by HPLC – Use of pentafluorophenyl-propyl column. J LIQ CHROMATOGR R T 2019. [DOI: 10.1080/10826076.2019.1674662] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Affiliation(s)
- Marko Ilić
- Department of Applied and Engineering Chemistry, Faculty of Technology Novi Sad, University of Novi Sad, Novi Sad, Serbia
| | - Marijana Ačanski
- Department of Applied and Engineering Chemistry, Faculty of Technology Novi Sad, University of Novi Sad, Novi Sad, Serbia
| | - Kristian Pastor
- Department of Applied and Engineering Chemistry, Faculty of Technology Novi Sad, University of Novi Sad, Novi Sad, Serbia
| | - Ljiljana Popović
- Department of Applied and Engineering Chemistry, Faculty of Technology Novi Sad, University of Novi Sad, Novi Sad, Serbia
| | - Suzana Jovanović-Šanta
- Faculty of Sciences, Department of Chemistry, Biochemistry and Environmental Protection, University of Novi Sad, Novi Sad, Serbia
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13
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Lasić K, Bokulić A, Milić A, Nigović B, Mornar A. Lipophilicity and bio‐mimetic properties determination of phytoestrogens using ultra‐high‐performance liquid chromatography. Biomed Chromatogr 2019; 33:e4551. [DOI: 10.1002/bmc.4551] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2018] [Revised: 03/26/2019] [Accepted: 04/05/2019] [Indexed: 12/14/2022]
Affiliation(s)
| | | | | | - Biljana Nigović
- Department of Pharmaceutical AnalysisUniversity of Zagreb, Faculty of Pharmacy and Biochemistry Zagreb Croatia
| | - Ana Mornar
- Department of Pharmaceutical AnalysisUniversity of Zagreb, Faculty of Pharmacy and Biochemistry Zagreb Croatia
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14
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Kempińska D, Chmiel T, Kot-Wasik A, Mróz A, Mazerska Z, Namieśnik J. State of the art and prospects of methods for determination of lipophilicity of chemical compounds. Trends Analyt Chem 2019. [DOI: 10.1016/j.trac.2019.01.011] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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15
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Development and Validation of Liquid Chromatography-Based Methods to Assess the Lipophilicity of Cytotoxic Platinum(IV) Complexes. INORGANICS 2018. [DOI: 10.3390/inorganics6040130] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Lipophilicity is a crucial parameter for drug discovery, usually determined by the logarithmic partition coefficient (Log P) between octanol and water. However, the available detection methods have restricted the widespread use of the partition coefficient in inorganic medicinal chemistry, and recent investigations have shifted towards chromatographic lipophilicity parameters, frequently without a conversion to derive Log P. As high-performance liquid chromatography (HPLC) instruments are readily available to research groups, a HPLC-based method is presented and validated to derive the partition coefficient of a set of 19 structurally diverse and cytotoxic platinum(IV) complexes exhibiting a dynamic range of at least four orders of magnitude. The chromatographic lipophilicity parameters φ0 and Log kw were experimentally determined for the same set of compounds, and a correlation was obtained that allows interconversion between the two lipophilicity scales, which was applied to an additional set of 34 platinum(IV) drug candidates. Thereby, a φ0 = 58 corresponds to Log P = 0. The same approaches were successfully evaluated to determine the distribution coefficient (Log D) of five ionisable platinum(IV) compounds to sample pH-dependent effects on the lipophilicity. This study provides straight-forward HPLC-based methods to determine the lipophilicity of cytotoxic platinum(IV) complexes in the form of Log P and φ0 that can be interconverted and easily expanded to other metal-based compound classes.
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Malík I, Csöllei J, Solovič I, Pospíšilová Š, Michnová H, Jampílek J, Čížek A, Kapustíková I, Čurillová J, Pecháčová M, Stolaříková J, Pecher D, Oravec M. Dibasic Derivatives of Phenylcarbamic Acid against Mycobacterial Strains: Old Drugs and New Tricks? Molecules 2018; 23:E2493. [PMID: 30274224 PMCID: PMC6222509 DOI: 10.3390/molecules23102493] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2018] [Revised: 09/21/2018] [Accepted: 09/24/2018] [Indexed: 12/11/2022] Open
Abstract
In order to provide a more detailed view on the structure⁻antimycobacterial activity relationship (SAR) of phenylcarbamic acid derivatives containing two centers of protonation, 1-[2-[({[2-/3-(alkoxy)phenyl]amino}carbonyl)oxy]-3-(dipropylammonio)propyl]pyrrolidinium oxalates (1a⁻d)/dichlorides (1e⁻h) as well as 1-[2-[({[2-/3-(alkoxy)phenyl]amino}carbonyl)oxy]-3-(di-propylammonio)propyl]azepanium oxalates (1i⁻l)/dichlorides (1m⁻p; alkoxy = butoxy to heptyloxy) were physicochemically characterized by estimation of their surface tension (γ; Traube's stalagmometric method), electronic features (log ε; UV/Vis spectrophotometry) and lipophilic properties (log kw; isocratic RP-HPLC) as well. The experimental log kw dataset was studied together with computational logarithms of partition coefficients (log P) generated by various methods based mainly on atomic or combined atomic and fragmental principles. Similarities and differences between the experimental and in silico lipophilicity descriptors were analyzed by unscaled principal component analysis (PCA). The in vitro activity of compounds 1a⁻p was inspected against Mycobacterium tuberculosis CNCTC My 331/88 (identical with H37Rv and ATCC 2794, respectively), M. tuberculosis H37Ra ATCC 25177, M. kansasii CNCTC My 235/80 (identical with ATCC 12478), the M. kansasii 6509/96 clinical isolate, M. kansasii DSM 44162, M. avium CNCTC My 330/80 (identical with ATCC 25291), M. smegmatis ATCC 700084 and M. marinum CAMP 5644, respectively. In vitro susceptibility of the mycobacteria to reference drugs isoniazid, ethambutol, ofloxacin or ciprofloxacin was tested as well. A very unique aspect of the research was that many compounds from the set 1a⁻p were highly efficient almost against all tested mycobacteria. The most promising derivatives showed MIC values varied from 1.9 μM to 8 μM, which were lower compared to those of used standards, especially if concerning ability to fight M. tuberculosis H37Ra ATCC 25177, M. kansasii DSM 44162 or M. avium CNCTC My 330/80. Current in vitro biological assays and systematic SAR studies based on PCA approach as well as fitting procedures, which were supported by relevant statistical descriptors, proved that the compounds 1a⁻p represented a very promising molecular framework for development of 'non-traditional' but effective antimycobacterial agents.
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Affiliation(s)
- Ivan Malík
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Comenius University in Bratislava, Odbojárov 10, SK-832 32 Bratislava, Slovakia.
| | - Jozef Csöllei
- Department of Chemical Drugs, Faculty of Pharmacy, University of Veterinary and Pharmaceutical Sciences in Brno, Palackého 1946/1, CZ-612 42 Brno, Czech Republic.
| | - Ivan Solovič
- Clinic for Tuberculosis and Lung Diseases, National Institute for Tuberculosis, Lung Diseases and Thoracic Surgery, Vyšné Hágy, SK-059 84 Vysoké Tatry, Slovakia.
- Department of Public Health, Faculty of Health, Catholic University in Ružomberok, Hrabovská cesta 1A, SK-034 01 Ružomberok, Slovakia.
| | - Šárka Pospíšilová
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Comenius University in Bratislava, Odbojárov 10, SK-832 32 Bratislava, Slovakia.
| | - Hana Michnová
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Comenius University in Bratislava, Odbojárov 10, SK-832 32 Bratislava, Slovakia.
| | - Josef Jampílek
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Comenius University in Bratislava, Odbojárov 10, SK-832 32 Bratislava, Slovakia.
| | - Alois Čížek
- Clinic for Department of Infectious Diseases and Microbiology, Faculty of Veterinary Medicine, University of Veterinary and Pharmaceutical Sciences, Palackého 1946/1, CZ-612 42 Brno, Czech Republic.
| | - Iva Kapustíková
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Comenius University in Bratislava, Odbojárov 10, SK-832 32 Bratislava, Slovakia.
| | - Jana Čurillová
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Comenius University in Bratislava, Odbojárov 10, SK-832 32 Bratislava, Slovakia.
| | - Mária Pecháčová
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Comenius University in Bratislava, Odbojárov 10, SK-832 32 Bratislava, Slovakia.
| | - Jiřina Stolaříková
- Laboratory for Mycobacterial Diagnostics and Tuberculosis, Regional Institute of Public Health, Partyzánské náměstí 7, CZ-702 00 Ostrava, Czech Republic.
| | - Daniel Pecher
- Department of Pharmaceutical Analysis and Nuclear Pharmacy, Faculty of Pharmacy, Comenius University in Bratislava, Odbojárov 10, SK-832 32 Bratislava, Slovakia.
- Toxicological and Antidoping Center, Faculty of Pharmacy, Comenius University in Bratislava, Odbojárov 10, SK-832 32 Bratislava, Slovakia.
| | - Michal Oravec
- Global Change Research Institute CAS, Belidla 986/4a, CZ-603 00 Brno, Czech Republic.
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Gadais C, Devillers E, Gasparik V, Chelain E, Pytkowicz J, Brigaud T. Probing the Outstanding Local Hydrophobicity Increases in Peptide Sequences Induced by Incorporation of Trifluoromethylated Amino Acids. Chembiochem 2018. [DOI: 10.1002/cbic.201800088] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Charlène Gadais
- Laboratory of Chemical Biology (LCB, EA 4505); Université Cergy-Pontoise; Mail Gay-Lussac 95000 Cergy-Pontoise cedex France
| | - Emmanuelle Devillers
- Laboratory of Chemical Biology (LCB, EA 4505); Université Cergy-Pontoise; Mail Gay-Lussac 95000 Cergy-Pontoise cedex France
| | - Vincent Gasparik
- Laboratory of Chemical Biology (LCB, EA 4505); Université Cergy-Pontoise; Mail Gay-Lussac 95000 Cergy-Pontoise cedex France
| | - Evelyne Chelain
- Laboratory of Chemical Biology (LCB, EA 4505); Université Cergy-Pontoise; Mail Gay-Lussac 95000 Cergy-Pontoise cedex France
| | - Julien Pytkowicz
- Laboratory of Chemical Biology (LCB, EA 4505); Université Cergy-Pontoise; Mail Gay-Lussac 95000 Cergy-Pontoise cedex France
| | - Thierry Brigaud
- Laboratory of Chemical Biology (LCB, EA 4505); Université Cergy-Pontoise; Mail Gay-Lussac 95000 Cergy-Pontoise cedex France
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18
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Oliver M, Gadais C, García-Pindado J, Teixidó M, Lensen N, Chaume G, Brigaud T. Trifluoromethylated proline analogues as efficient tools to enhance the hydrophobicity and to promote passive diffusion transport of the l-prolyl-l-leucyl glycinamide (PLG) tripeptide. RSC Adv 2018; 8:14597-14602. [PMID: 35540789 PMCID: PMC9079923 DOI: 10.1039/c8ra02511h] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2018] [Accepted: 04/11/2018] [Indexed: 01/23/2023] Open
Abstract
The synthesis of four CF3-proline analogues of the PLG peptide is reported. Our results show that the incorporation of trifluoromethylated amino acids (Tfm-AAs) at the N-terminal position of a peptide significantly increases its hydrophobicity. In addition, depending on the relative configuration and the position of the CF3 group, Tfm-AAs can also promote passive diffusion transport.
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Affiliation(s)
- Martin Oliver
- Laboratoire de Chimie Biologique (LCB), Université de Cergy-Pontoise 5 mail Gay-Lussac, Neuville-sur-Oise 95031 Cergy-Pontoise France
| | - Charlène Gadais
- Laboratoire de Chimie Biologique (LCB), Université de Cergy-Pontoise 5 mail Gay-Lussac, Neuville-sur-Oise 95031 Cergy-Pontoise France
| | - Júlia García-Pindado
- Institute for Research in Biomedicine (IRB Barcelona), Barcelona Institute of Science and Technology (BIST) C/ Baldiri Reixac 10 08028 Barcelona Spain
| | - Meritxell Teixidó
- Institute for Research in Biomedicine (IRB Barcelona), Barcelona Institute of Science and Technology (BIST) C/ Baldiri Reixac 10 08028 Barcelona Spain
| | - Nathalie Lensen
- Laboratoire de Chimie Biologique (LCB), Université de Cergy-Pontoise 5 mail Gay-Lussac, Neuville-sur-Oise 95031 Cergy-Pontoise France
| | - Grégory Chaume
- Laboratoire de Chimie Biologique (LCB), Université de Cergy-Pontoise 5 mail Gay-Lussac, Neuville-sur-Oise 95031 Cergy-Pontoise France
| | - Thierry Brigaud
- Laboratoire de Chimie Biologique (LCB), Université de Cergy-Pontoise 5 mail Gay-Lussac, Neuville-sur-Oise 95031 Cergy-Pontoise France
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19
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Affiliation(s)
- T. Angelov
- Department of Research and Development, Serendipity RS Ltd, Sofia, Bulgaria
| | - I. Hristov
- Department of Medical Chemistry and Biochemistry, Faculty of Medicine, Medical University of Sofia, Sofia, Bulgaria
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20
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Riedl CA, Hejl M, Klose MHM, Roller A, Jakupec MA, Kandioller W, Keppler BK. N- and S-donor leaving groups in triazole-based ruthena(ii)cycles: potent anticancer activity, selective activation, and mode of action studies. Dalton Trans 2018. [DOI: 10.1039/c8dt00449h] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
The functionalization of cycloruthenated triazole arene complexes with N- or S-donors affords pH or redox-activatable complexes with high cytotoxic activities.
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Affiliation(s)
- Christoph A. Riedl
- Institute of Inorganic Chemistry
- Faculty of Chemistry
- University of Vienna
- 1090 Vienna
- Austria
| | - Michaela Hejl
- Institute of Inorganic Chemistry
- Faculty of Chemistry
- University of Vienna
- 1090 Vienna
- Austria
| | - Matthias H. M. Klose
- Institute of Inorganic Chemistry
- Faculty of Chemistry
- University of Vienna
- 1090 Vienna
- Austria
| | - Alexander Roller
- Institute of Inorganic Chemistry
- Faculty of Chemistry
- University of Vienna
- 1090 Vienna
- Austria
| | - Michael A. Jakupec
- Institute of Inorganic Chemistry
- Faculty of Chemistry
- University of Vienna
- 1090 Vienna
- Austria
| | - Wolfgang Kandioller
- Institute of Inorganic Chemistry
- Faculty of Chemistry
- University of Vienna
- 1090 Vienna
- Austria
| | - Bernhard K. Keppler
- Institute of Inorganic Chemistry
- Faculty of Chemistry
- University of Vienna
- 1090 Vienna
- Austria
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21
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Giaginis C, Tsopelas F, Tsantili-Kakoulidou A. The Impact of Lipophilicity in Drug Discovery: Rapid Measurements by Means of Reversed-Phase HPLC. Methods Mol Biol 2018; 1824:217-228. [PMID: 30039409 DOI: 10.1007/978-1-4939-8630-9_12] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Lipophilicity constitutes a vital physicochemical property in drug design as it is connected with pharmacodynamic and pharmacokinetic properties as well as toxicological aspects of candidate drugs. Traditional partitioning experiments to determine n-octanol-water coefficients are laborious and time-consuming, while they cannot be reliably performed for highly lipophilic or compounds undergoing degradation. Alternatively, lipophilicity of candidate drugs can be accurately and reproducibly determined using reversed-phase liquid chromatography. In this chapter, the details of protocols for lipophilicity assessment using reversed-phase HPLC, under conditions which provide the best simulation of n-octanol-water partition coefficients, are described.
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Affiliation(s)
- Constantinos Giaginis
- Department of Food Science and Nutrition, School of Environment, University of the Aegean, Myrina, Lemnos, Greece
| | - Fotios Tsopelas
- Laboratory of Inorganic and Analytical Chemistry, School of Chemical Engineering, National Technical University of Athens, Athens, Greece
| | - Anna Tsantili-Kakoulidou
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, National and Kapodistrian University of Athens, Panepistimiopolis, Zografou, Athens, Greece.
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22
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Assessment of Lipophilicity Indices Derived from Retention Behavior of Antioxidant Compounds in RP-HPLC. Molecules 2017; 22:molecules22040550. [PMID: 28353678 PMCID: PMC6154650 DOI: 10.3390/molecules22040550] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2017] [Revised: 03/26/2017] [Accepted: 03/27/2017] [Indexed: 11/17/2022] Open
Abstract
Reverse phase high pressure liquid chromatography was employed in order to evaluate the lipophilicity of antioxidant compounds from different classes, such as phenolic acids, flavanones, flavanols, flavones, anthocyanins, stilbenes, xantonoids, and proanthocyanidins. The retention time of each compound was measured using five different HPLC columns: RP18 (LiChroCART, Purosphere RP-18e), C8 (Zorbax, Eclipse XDBC8), C16-Amide (Discovery RP-Amide C16), CN100 (Saulentechnik, Lichrosphere), and pentafluorophenyl (Phenomenex, Kinetex PFP), and the mobile phase consisted of methanol and water (0.1% formic acid) in different proportions. The measurements were conducted at two different column temperatures, room temperature (22 °C) and, in order to mimic the environment from the human body, 37 °C. Furthermore, principal component analysis (PCA) was used to obtain new lipophilicity indices and holistic lipophilicity charts. Additionally, highly representative depictions of the chromatographic behavior of the investigated compounds and stationary phases at different temperatures were obtained using two new chemometric approaches, namely two-way joining cluster analysis and sum of ranking differences.
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23
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Valkó KL. Lipophilicity and biomimetic properties measured by HPLC to support drug discovery. J Pharm Biomed Anal 2016; 130:35-54. [PMID: 27084527 DOI: 10.1016/j.jpba.2016.04.009] [Citation(s) in RCA: 57] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2016] [Revised: 04/05/2016] [Accepted: 04/07/2016] [Indexed: 12/21/2022]
Abstract
HPLC methods that use chromatographic retention times for gaining information about the properties of compounds for the purpose of designing drug molecules are reviewed. Properties, such as lipophilicity, protein binding, phospholipid binding, and acid/base character can be incorporated in the design of molecules with the right biological distribution and pharmacokinetic profile to become an effective drug. Standardization of various methodologies is suggested in order to obtain data suitable for inter-laboratory comparison. The published HPLC methods for lipophilicity, acid/base character, protein and phospholipid binding are critically reviewed and compared with each other using the solvation equation approach. One of the most important discussion points is how these data can be used in models and how they can influence the drug discovery process. Therefore, the published models for volume of distribution, unbound volume of distribution and drug efficiency are also discussed. The general relationships between the chemical structure and biomimetic HPLC properties are described in view of ranking and selecting putative drug molecules.
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Affiliation(s)
- Klára L Valkó
- Department of Pharmaceutical and Biological Chemistry, UCL School of Pharmacy, London, United Kingdom; Bio-Mimetic Chromatography Consultancy, 17 Cabot Close, Stevenage, Herts SG2 0ES, United Kingdom.
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24
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Cusumano A, Guillarme D, Beck A, Fekete S. Practical method development for the separation of monoclonal antibodies and antibody-drug-conjugate species in hydrophobic interaction chromatoraphy, part 2: Optimization of the phase system. J Pharm Biomed Anal 2016; 121:161-173. [DOI: 10.1016/j.jpba.2016.01.037] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2015] [Revised: 01/13/2016] [Accepted: 01/14/2016] [Indexed: 01/09/2023]
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25
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Brack W, Ait-Aissa S, Burgess RM, Busch W, Creusot N, Di Paolo C, Escher BI, Mark Hewitt L, Hilscherova K, Hollender J, Hollert H, Jonker W, Kool J, Lamoree M, Muschket M, Neumann S, Rostkowski P, Ruttkies C, Schollee J, Schymanski EL, Schulze T, Seiler TB, Tindall AJ, De Aragão Umbuzeiro G, Vrana B, Krauss M. Effect-directed analysis supporting monitoring of aquatic environments--An in-depth overview. THE SCIENCE OF THE TOTAL ENVIRONMENT 2016; 544:1073-118. [PMID: 26779957 DOI: 10.1016/j.scitotenv.2015.11.102] [Citation(s) in RCA: 219] [Impact Index Per Article: 27.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2015] [Revised: 11/20/2015] [Accepted: 11/20/2015] [Indexed: 05/18/2023]
Abstract
Aquatic environments are often contaminated with complex mixtures of chemicals that may pose a risk to ecosystems and human health. This contamination cannot be addressed with target analysis alone but tools are required to reduce this complexity and identify those chemicals that might cause adverse effects. Effect-directed analysis (EDA) is designed to meet this challenge and faces increasing interest in water and sediment quality monitoring. Thus, the present paper summarizes current experience with the EDA approach and the tools required, and provides practical advice on their application. The paper highlights the need for proper problem formulation and gives general advice for study design. As the EDA approach is directed by toxicity, basic principles for the selection of bioassays are given as well as a comprehensive compilation of appropriate assays, including their strengths and weaknesses. A specific focus is given to strategies for sampling, extraction and bioassay dosing since they strongly impact prioritization of toxicants in EDA. Reduction of sample complexity mainly relies on fractionation procedures, which are discussed in this paper, including quality assurance and quality control. Automated combinations of fractionation, biotesting and chemical analysis using so-called hyphenated tools can enhance the throughput and might reduce the risk of artifacts in laboratory work. The key to determining the chemical structures causing effects is analytical toxicant identification. The latest approaches, tools, software and databases for target-, suspect and non-target screening as well as unknown identification are discussed together with analytical and toxicological confirmation approaches. A better understanding of optimal use and combination of EDA tools will help to design efficient and successful toxicant identification studies in the context of quality monitoring in multiply stressed environments.
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Affiliation(s)
- Werner Brack
- UFZ Helmholtz Centre for Environmental Research, Permoserstraße 15, 04318 Leipzig, Germany; RWTH Aachen University, Worringerweg 1, 52074 Aachen, Germany
| | - Selim Ait-Aissa
- Institut National de l'Environnement Industriel et des Risques INERIS, BP2, 60550 Verneuil-en-Halatte, France
| | - Robert M Burgess
- US Environmental Protection Agency, Office of Research and Development, National Health and Environmental Effects Research Laboratory, Atlantic Ecology Division, Narragansett, RI, USA
| | - Wibke Busch
- UFZ Helmholtz Centre for Environmental Research, Permoserstraße 15, 04318 Leipzig, Germany
| | - Nicolas Creusot
- Institut National de l'Environnement Industriel et des Risques INERIS, BP2, 60550 Verneuil-en-Halatte, France
| | | | - Beate I Escher
- UFZ Helmholtz Centre for Environmental Research, Permoserstraße 15, 04318 Leipzig, Germany; Eberhard Karls University Tübingen, 72074 Tübingen, Germany
| | - L Mark Hewitt
- Water Science and Technology Directorate, Environment Canada, 867 Lakeshore Road, Burlington, Ontario L7S 1A1, Canada
| | - Klara Hilscherova
- Masaryk University, Research Centre for Toxic Compounds in the Environment (RECETOX), Kamenice 753/5, 625 00 Brno, Czech Republic
| | - Juliane Hollender
- Eawag, Swiss Federal Institute of Aquatic Science and Technology, 8600 Dübendorf, Switzerland
| | - Henner Hollert
- RWTH Aachen University, Worringerweg 1, 52074 Aachen, Germany
| | - Willem Jonker
- VU University, BioMolecular Analysis Group, Amsterdam, The Netherlands
| | - Jeroen Kool
- VU University, BioMolecular Analysis Group, Amsterdam, The Netherlands
| | - Marja Lamoree
- VU Amsterdam, Institute for Environmental Studies, Amsterdam, The Netherlands
| | - Matthias Muschket
- UFZ Helmholtz Centre for Environmental Research, Permoserstraße 15, 04318 Leipzig, Germany
| | - Steffen Neumann
- Leibniz Institute of Plant Biochemistry, Halle (Saale), Germany
| | - Pawel Rostkowski
- NILU - Norwegian Institute for Air Research, Instituttveien 18, 2007 Kjeller, Norway
| | | | - Jennifer Schollee
- Eawag, Swiss Federal Institute of Aquatic Science and Technology, 8600 Dübendorf, Switzerland
| | - Emma L Schymanski
- Eawag, Swiss Federal Institute of Aquatic Science and Technology, 8600 Dübendorf, Switzerland
| | - Tobias Schulze
- UFZ Helmholtz Centre for Environmental Research, Permoserstraße 15, 04318 Leipzig, Germany
| | | | - Andrew J Tindall
- WatchFrag, Bâtiment Genavenir 3, 1 Rue Pierre Fontaine, 91000 Evry, France
| | | | - Branislav Vrana
- Masaryk University, Research Centre for Toxic Compounds in the Environment (RECETOX), Kamenice 753/5, 625 00 Brno, Czech Republic
| | - Martin Krauss
- UFZ Helmholtz Centre for Environmental Research, Permoserstraße 15, 04318 Leipzig, Germany
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Strzemecka L, Hawrył A, Świeboda R, Hawrył M, Jagiełło-Wójtowicz E, Piątkowska-Chmiel I, Herbet M, Chodkowska A. Determination of Lipophilicity of Allyl Thiosemicarbazide, N1-Thiocarbamylamidrazone Derivatives, and their Cyclic Products by RP-HPLC, RP-TLC, and Theoretical Methods: Effects of Selected Compounds on the CNS of Mice. J LIQ CHROMATOGR R T 2015. [DOI: 10.1080/10826076.2015.1050502] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- Leokadia Strzemecka
- Department of Organic Chemistry, Faculty of Pharmacy with Medical Analytics Division, Medical University, Lublin, Poland
| | - Anna Hawrył
- Department of Inorganic Chemistry, Medical University, Lublin, Poland
| | - Ryszard Świeboda
- Department of Inorganic Chemistry, Medical University, Lublin, Poland
| | - Mirosław Hawrył
- Department of Inorganic Chemistry, Medical University, Lublin, Poland
| | | | | | - Mariola Herbet
- Department of Toxicology, Medical University, Lublin, Poland
| | - Anna Chodkowska
- Department of Toxicology, Medical University, Lublin, Poland
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28
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Kalász H, Doležal R, Tekes K, Magyar K, Csermely T, Hosztafi S. Comparative lipophilicity of morphine derivatives. JPC-J PLANAR CHROMAT 2015. [DOI: 10.1556/jpc.28.2015.2.7] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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29
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Sztanke M, Tuzimski T, Janicka M, Sztanke K. Structure-retention behaviour of biologically active fused 1,2,4-triazinones--correlation with in silico molecular properties. Eur J Pharm Sci 2014; 68:114-26. [PMID: 25528370 DOI: 10.1016/j.ejps.2014.12.011] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2014] [Revised: 12/08/2014] [Accepted: 12/11/2014] [Indexed: 02/08/2023]
Abstract
The chromatographic behaviour and significant lipophilicity/hydrophobicity indices (log k(w), S, φ(0)) are presented for 21 biologically active fused 1,2,4-triazinones based on the linear relationship: log k = log k(w)-Sφ established for the retention on LC-18 HPLC column, using as mobile phases mixtures of three organic modifiers with water. The effect of these mobile phase modifiers on the chromatographic behaviour of solutes was established and the organic modifier of choice is suggested. The complex correlation of slopes versus intercepts obtained for acetonitrile, contrary to linear ones obtained for methanol and dioxane are disclosed. The observed difference in retention mechanism for acetonitrile compared to methanol and dioxane is explained by intermolecular interactions encoded in lipophilicity. Linear correlations with statistically significant levels between log kw values determined from three different chromatographic systems were obtained. The relationships between log k(w) constants (derived from the linear model for methanol-water mobile phases) and predicted log P and log S values by the use of various computational methods were investigated and these were established with high correlation coefficients. The predicted log P values plotted against φ(0 (MeOH)) indices showed the best fit. Principal component analysis was used to compare various lipophilicity parameters of the solutes and their in silico biological descriptors relevant to optimal pharmacokinetics profile. The similarities and dissimilarities between all the variables and molecular structures of solutes are presented. Statistically significant correlations were found between the chromatographic lipophilicity indices and the calculated pharmacokinetic descriptors: fraction unbound in brain (f(u, brain)), oral bioavailability (%F), permeability and intestinal absorption in jejunum (Caco-2), skin permeation (log K(p)) and blood/brain concentration (log BB).
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Affiliation(s)
- Małgorzata Sztanke
- Chair and Department of Medical Chemistry, Medical University of Lublin, 4A Chodźki Street, 20-093 Lublin, Poland.
| | - Tomasz Tuzimski
- Department of Physical Chemistry, Chair of Chemistry, Faculty of Pharmacy with Medical Analytics Division, Medical University of Lublin, 4A Chodźki Street, 20-093 Lublin, Poland
| | - Małgorzata Janicka
- Maria Curie-Skłodowska University, Faculty of Chemistry, Department of Physical Chemistry, Maria Curie-Skłodowska Sq. 3, 20-031 Lublin, Poland
| | - Krzysztof Sztanke
- Laboratory of Bioorganic Synthesis and Analysis, Chair and Department of Medical Chemistry, Medical University of Lublin, 4A Chodźki Street, 20-093 Lublin, Poland
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30
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Hawrył A, Kuśmierz E, Hawrył M, Świeboda R, Wujec M. Determination of Lipophilicity of New Thiosemicarbazide and 1,2,4-triazole-3-thione Derivatives Using Reversed-Phase HPLC Method and Theoretical Calculations. J LIQ CHROMATOGR R T 2014. [DOI: 10.1080/10826076.2014.913519] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Affiliation(s)
- Anna Hawrył
- a Department of Inorganic Chemistry , Medical University of Lublin , Lublin , Poland
| | - Edyta Kuśmierz
- b Department of Organic Chemistry , Medical University of Lublin , Lublin , Poland
| | - Mirosław Hawrył
- a Department of Inorganic Chemistry , Medical University of Lublin , Lublin , Poland
| | - Ryszard Świeboda
- a Department of Inorganic Chemistry , Medical University of Lublin , Lublin , Poland
| | - Monika Wujec
- b Department of Organic Chemistry , Medical University of Lublin , Lublin , Poland
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31
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Voicu V, Sârbu C, Tache F, Micăle F, Rădulescu ŞF, Sakurada K, Ohta H, Medvedovici A. Lipophilicity indices derived from the liquid chromatographic behavior observed under bimodal retention conditions (reversed phase/hydrophilic interaction): Application to a representative set of pyridinium oximes. Talanta 2014; 122:172-9. [DOI: 10.1016/j.talanta.2014.01.048] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2013] [Revised: 01/15/2014] [Accepted: 01/20/2014] [Indexed: 11/17/2022]
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32
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Ruggiu F, Gizzi P, Galzi JL, Hibert M, Haiech J, Baskin I, Horvath D, Marcou G, Varnek A. Quantitative structure-property relationship modeling: a valuable support in high-throughput screening quality control. Anal Chem 2014; 86:2510-20. [PMID: 24479843 DOI: 10.1021/ac403544k] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Evaluation of important pharmacokinetic properties such as hydrophobicity by high-throughput screening (HTS) methods is a major issue in drug discovery. In this paper, we present measurements of the chromatographic hydrophobicity index (CHI) on a subset of the French chemical library Chimiothèque Nationale (CN). The data were used in quantitative structure-property relationship (QSPR) modeling in order to annotate the CN. An algorithm is proposed to detect problematic molecules with large prediction errors, called outliers. In order to find an explanation for these large discrepancies between predicted and experimental values, these compounds were reanalyzed experimentally. As the first selected outliers indeed had experimental problems, including hydrolysis or sheer absence of expected structure, we herewith propose the use of QSPR as a support tool for quality control of screening data and encourage cooperation between experimental and theoretical teams to improve results. The corrected data were used to produce a model, which is freely available on our web server at http://infochim.u-strasbg.fr/webserv/VSEngine.html .
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Affiliation(s)
- Fiorella Ruggiu
- Laboratoire de Chémoinformatique, UMR 7140 CNRS, Université de Strasbourg , 1 rue Blaise Pascal, 67000 Strasbourg, France
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33
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Natalini B, Sardella R, Gioiello A, Ianni F, Di Michele A, Marinozzi M. Determination of bile salt critical micellization concentration on the road to drug discovery. J Pharm Biomed Anal 2014; 87:62-81. [DOI: 10.1016/j.jpba.2013.06.029] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2013] [Accepted: 06/14/2013] [Indexed: 01/22/2023]
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34
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Ilijaš M, Malnar I, Gabelica Marković V, Stepanić V. Study of lipophilicity and membrane partition of 4-hydroxycoumarins by HPLC and PCA. J Pharm Biomed Anal 2013; 76:104-11. [DOI: 10.1016/j.jpba.2012.11.043] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2012] [Revised: 11/27/2012] [Accepted: 11/29/2012] [Indexed: 11/25/2022]
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35
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Meier SM, Hanif M, Adhireksan Z, Pichler V, Novak M, Jirkovsky E, Jakupec MA, Arion VB, Davey CA, Keppler BK, Hartinger CG. Novel metal(ii) arene 2-pyridinecarbothioamides: a rationale to orally active organometallic anticancer agents. Chem Sci 2013. [DOI: 10.1039/c3sc22294b] [Citation(s) in RCA: 101] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
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36
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Giaginis C, Tsantili-Kakoulidou A. Quantitative Structure–Retention Relationships as Useful Tool to Characterize Chromatographic Systems and Their Potential to Simulate Biological Processes. Chromatographia 2012. [DOI: 10.1007/s10337-012-2374-6] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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37
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Krass JD, Jastorff B, Genieser HG. Determination of lipophilicity by gradient elution high-performance liquid chromatography. Anal Chem 2012; 69:2575-81. [PMID: 21639392 DOI: 10.1021/ac961246i] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A novel method for the determination of lipophilicity using a simple HPLC protocol based on gradient elution chromatography is presented and compared to the common isocratic log k'(w) procedure. Linear relationships with high correlation coefficients between both methods for biologically active nucleosides and cyclic nucleotides as well as for environmentally relevant aromatic hydrocarbons were found. A mathematical fit to support the empirically determined linear relationship is presented. It is shown that the observed relationship between log k'(w) and the apparent capacity factor (k'(g)) determined by gradient elution is derivable by theoretical considerations as well. Since the gradient method is much less time-consuming compared to other procedures, it represents a convenient alternative for determining lipophilicity data in the future.
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Affiliation(s)
- J D Krass
- Zentrum für Umweltschutz und Umwelttechnologie (UFT), Universität Bremen, Leobenerstrasse, D-28359 Bremen, FRG, and BIOLOG Life Science Institute, Flughafendamm 9a, P.O. Box 107125, D-28071 Bremen, FRG
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38
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Valkó K, Bevan C, Reynolds D. Chromatographic Hydrophobicity Index by Fast-Gradient RP-HPLC: A High-Throughput Alternative to log P/log D. Anal Chem 2012; 69:2022-9. [PMID: 21639241 DOI: 10.1021/ac961242d] [Citation(s) in RCA: 316] [Impact Index Per Article: 26.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A new chromatographic hydrophobicity index (CHI) is described which can be used as part of a protocol for high-throughput (50-100 compounds/day) physicochemical property profiling for rational drug design. The index is derived from retention times (t(R)) observed in a fast gradient reversed-phase HPLC method. The isocratic retention factors (log k') were measured for a series of 76 structurally unrelated compounds by using various concentrations of acetonitrile in the mobile phase. By plotting the log k' as a function of the acetonitrile concentration, the slope (S) and the intercept (log k'(w)) values were calculated. The previously validated index of hydrophobicity φ(0) was calculated as -log k'(w)/S. A good linear correlation was obtained between the gradient retention time values, t(R) and the isocratically determined φ(0) values for the 76 compounds. The constants of this linear correlation can be used to calculate CHI. For most compounds, CHI is between 0 and 100 and in this range it approximates to the percentage (by volume) of acetonitrile required to achieve an equal distribution of compound between the mobile and the stationary phases. CHI values can be measured using acidic, neutral, or slightly basic eluents. Values corresponding to the neutral form of molecules could be measured for 52 of the compounds and showed good correlation (r = 0.851) to the calculated octanol/water partition coefficient (c log P) values.
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Affiliation(s)
- K Valkó
- Department of Physical Sciences, GlaxoWellcome Medicines Research Centre, Stevenage, Herts, SG1 2NY, United Kingdom
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Cozma A, Zaharia V, Ignat A, Gocan S, Grinberg N. Prediction of the Lipophilicity of Nine New Synthesized Selenazoly and Three Aroyl-Hydrazinoselenazoles Derivatives by Reversed-Phase High Performance Thin-Layer Chromatography. J Chromatogr Sci 2012; 50:157-61. [DOI: 10.1093/chromsci/bmr034] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Affiliation(s)
- A Cozma
- University of Oradea, Faculty of Science, Department of Chemistry, Romania
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40
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Cozma A, Vlase L, Ignat A, Zaharia V, Gocan S, Grinberg N. PREDICTION OF THE LIPOPHILICITY OF EIGHT NEWP-TOLUENESULFONYL-HYDRAZINOTHIAZOLE AND HYDRAZINE-BIS-THIAZOLE DERIVATIVES: A COMPARISON BETWEEN RP-HPTLC AND RP-HPLC. J LIQ CHROMATOGR R T 2012. [DOI: 10.1080/10826076.2011.631658] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
Affiliation(s)
- Alina Cozma
- a Department of Chemistry , University of Oradea, Faculty of Science , Romania
| | - Laurian Vlase
- b Faculty of Pharmacy , University of Medicine and Pharmacy “Iuliu Haţieganu,” , Romania
| | - Adriana Ignat
- b Faculty of Pharmacy , University of Medicine and Pharmacy “Iuliu Haţieganu,” , Romania
| | - Valentin Zaharia
- b Faculty of Pharmacy , University of Medicine and Pharmacy “Iuliu Haţieganu,” , Romania
| | - Simion Gocan
- c Analytical Chemistry Department , University Babes-Bolyai , Cluj-Napoca , Romania
| | - Nelu Grinberg
- d Boerhringer-Ingelheim Pharmaceutical, Inc. , Ridgefield , Connecticut , USA
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41
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Nielsen KF, Månsson M, Rank C, Frisvad JC, Larsen TO. Dereplication of microbial natural products by LC-DAD-TOFMS. JOURNAL OF NATURAL PRODUCTS 2011; 74:2338-2348. [PMID: 22026385 DOI: 10.1021/np200254t] [Citation(s) in RCA: 161] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
Dereplication, the rapid identification of known compounds present in a mixture, is crucial to the fast discovery of novel natural products. Determining the elemental composition of compounds in mixtures and tentatively identifying natural products using MS/MS and UV/vis spectra is becoming easier with advances in analytical equipment and better compound databases. Here we demonstrate the use of LC-UV/vis-MS-based dereplication using data from UV/vis diode array detection and ESI+/ESI- time-of-flight MS for assignment of 719 microbial natural product and mycotoxin reference standards. ESI+ was the most versatile ionization method, detecting 93% of the compounds, although with 12% ionizing poorly. Using ESI+ alone, 56.1% of the compounds could be unambiguously assigned based on characteristic patterns of multiple adduct ions. Using ESI-, 36.4% of the compounds could have their molecular mass assigned unambiguously using multiple adduct ions, while a further 41% of the compounds were detected only as [M - H]-. The most reliable interpretations of conflicting ESI+ and ESI- data on a chromatographic peak were from the ionization polarity with the most intense ionization. Poor ionization was most common with small molecules (<200 Da). In ESI-, these were often polar and basic, while in ESI+ they were small aromatic acids or anthraquinones. No single ion-source settings could be applied over a m/z 60-2000 range. However, continuous switching among three settings (e.g., for 0.5 s each) during the chromatographic run allowed MS of both small labile molecules and large peptides, and pseudo MS/MS data on labile molecules since the settings for large molecules often induce fragmentation into small molecules.
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Affiliation(s)
- Kristian F Nielsen
- Center for Microbial Biotechnology, Department of Systems Biology, Technical University of Denmark , Søltofts Plads, Building 221, DK-2800 Kgs. Lyngby, Denmark.
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42
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Fast chromatographic determination of the bile salt critical micellar concentration. Anal Bioanal Chem 2011; 401:267-74. [DOI: 10.1007/s00216-011-5082-4] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2011] [Revised: 04/06/2011] [Accepted: 05/03/2011] [Indexed: 01/12/2023]
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43
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Yamashita T, Yamamoto E, Kushida I. Frozen water phase method for logD measurement using a 96-well plate. Talanta 2011; 84:809-13. [DOI: 10.1016/j.talanta.2011.02.015] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2010] [Revised: 02/08/2011] [Accepted: 02/09/2011] [Indexed: 11/15/2022]
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44
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Mornar A, Damić M, Nigović B. Pharmacokinetic Parameters of Statin Drugs Characterized by Reversed Phase High-Performance Liquid Chromatography. ANAL LETT 2011. [DOI: 10.1080/00032719.2010.511738] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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45
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A comparative study concerning chromatographic retention and computed partition coefficients of some precursors of peraza crown ethers. OPEN CHEM 2010. [DOI: 10.2478/s11532-010-0095-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
AbstractRetention indices for some precursors of peraza crown ethers were determined by reversed phase high-performance thin layer chromatography on RP-18 plates with methanol-water in different volume proportions as mobile phase. The Log P values for the same compounds were calculated using different computer programs: SciQSAR, SciLogP, Chem3D Ultra 8.0, XLOGP (based on atom contributions), Chemaxon and KOWWIN (based on atom/fragment contributions), cLogP (based on fragmental contributions), ALOGPS and IAlogP (based on atom-type electrotopological-state indices and neural network modeling). A comparative study concerning lipophilic parameters (RM0, b and ϕ0) and computed partition coefficients has been developed. Taking into account the correlation coefficients between determined and calculated Log P values, it seems that RM0 and b are less suitable than ϕ0 for estimating lipophilicity of the compounds investigated, and cLogP and ALOGPS provide the best correlations with experimental values.
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46
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Onişor C, Poša M, Kevrešan S, Kuhajda K, Sârbu C. Estimation of chromatographic lipophilicity of bile acids and their derivatives by reversed-phase thin layer chromatography. J Sep Sci 2010; 33:3110-8. [DOI: 10.1002/jssc.200900879] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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47
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Babushok VI, Zenkevich IG. Retention Characteristics of Peptides in RP-LC: Peptide Retention Prediction. Chromatographia 2010. [DOI: 10.1365/s10337-010-1721-8] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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48
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Sârbu C, Casoni D, Kot-Wasik A, Wasik A, Namieśnik J. Modeling of chromatographic lipophilicity of food synthetic dyes estimated on different columns. J Sep Sci 2010; 33:2219-29. [DOI: 10.1002/jssc.201000099] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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49
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Onişor C, Palage M, Sârbu C. Modeling of Chromatographic Lipophilicity Indices of Quaternary Ammonium and Nitrone Derivatives and Their Thiazolic Salts Using Molecular Descriptors. ANAL LETT 2010. [DOI: 10.1080/00032710903518575] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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50
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A model for predicting slopes S in the basic equation for the linear-solvent-strength theory of peptide separation by reversed-phase high-performance liquid chromatography. J Chromatogr A 2010; 1217:489-97. [DOI: 10.1016/j.chroma.2009.11.065] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2009] [Revised: 10/21/2009] [Accepted: 11/23/2009] [Indexed: 11/20/2022]
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