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Liang T, Chen J, Rui Y, Hexi L. The designation, synthesis, and affinity determination of affinity peptide for anthrax protective antigen. Chem Biol Drug Des 2023; 102:669-675. [PMID: 37286890 DOI: 10.1111/cbdd.14280] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2023] [Revised: 05/04/2023] [Accepted: 05/26/2023] [Indexed: 06/09/2023]
Abstract
Detection of anthrax protective antigen is an effective way to diagnose anthracnose, and it plays an important part in the treatment of anthracnose. Affinity peptides, as a miniature biological recognition element, can quickly and effectively detect anthrax protective antigens. Based on computer-aided design technology (CAD), we have herein developed an affinity peptide design strategy for the detection of anthrax protective antigens. Firstly, six high-value mutation sites were determined based on the molecular docking between the template peptide and the receptor, and then the multi-site mutation of amino acids was carried out in order to establish a virtual peptide library. The library was selected by using molecular dynamics simulation and the best designed affinity peptide (code: P24) was found. The theoretical affinity with P24 peptide has increased by 19.8% compared with template peptide. Finally, the affinity with P24 peptide was measured by SPR technology to reach the nanomole level, which verified the effectiveness of the design strategy. The newly designed affinity peptide is expected to be used in the diagnosis of anthracnose.
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Affiliation(s)
- Ting Liang
- The Institute of NBC Defense PLA Army, Beijing, China
| | - Jingfei Chen
- The Institute of NBC Defense PLA Army, Beijing, China
- Unit No. 32169 of PLA, Tibet, China
| | - Yan Rui
- The Institute of NBC Defense PLA Army, Beijing, China
| | - Li Hexi
- Unit No. 31666 of PLA, Wuwei, Gansu, China
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2
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Liang T, Chen J, Yan R, Jiang H, Li H. Research on Detection of Ultra-Low Concentration Anthrax Protective Antigen Using Graphene Field-Effect Transistor Biosensor. SENSORS (BASEL, SWITZERLAND) 2023; 23:5820. [PMID: 37447669 DOI: 10.3390/s23135820] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Revised: 05/28/2023] [Accepted: 06/01/2023] [Indexed: 07/15/2023]
Abstract
BACKGROUND Protective antigen (PA) is an important biomarker for the early diagnosis of anthrax, and the accurate detection of protective antigen under extremely low concentration conditions has always been a hot topic in the biomedical field. To complete the diagnosis of anthrax in a timely manner, it is necessary to detect PA at extremely low concentrations, as the amount of PA produced in the early stage of anthrax invasion is relatively small. Graphene field-effect transistor (Gr-FET) biosensors are a new type of material for preparing biosensors, with the advantages of a short detection time and ultra-low detection limit. METHODS The effect of different concentrations of diluents on the affinity of PA monoclonal antibodies was determined via an ELISA experiment. Combined with the Debye equation, 0.01 × PBS solution was finally selected as the diluent for the experiment. Then, a PA monoclonal antibody was selected as the bio-recognition element to construct a Gr-FET device based on CVD-grown graphene, which was used to detect the concentration of PA while recording the response time, linear range, detection limit, and other parameters. RESULTS The experimental results showed that the biosensor could quickly detect PA, with a linear range of 10 fg/mL to 100 pg/mL and a detection limit of 10 fg/mL. In addition, the biosensor showed excellent specificity and repeatability. CONCLUSIONS By constructing a Gr-FET device based on CVD-grown graphene and selecting a PA monoclonal antibody as the bio-recognition element, a highly sensitive, specific, and repeatable Gr-FET biosensor was successfully prepared for detecting extremely low concentrations of anthrax protective antigen (PA). This biosensor is expected to have a wide range of applications in clinical medicine and biological safety monitoring.
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Affiliation(s)
- Ting Liang
- The Institute of NBC Defense PLA Army, Beijing 102205, China
| | | | - Rui Yan
- The Institute of NBC Defense PLA Army, Beijing 102205, China
| | - Huaning Jiang
- The Institute of NBC Defense PLA Army, Beijing 102205, China
- Unit No. 32281 of PLA, Chengdu 610200, China
| | - Hexi Li
- The Institute of NBC Defense PLA Army, Beijing 102205, China
- Unit No. 31666 of PLA, Zhangye 610200, China
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3
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Sultangaziyev A, Bukasov R. Review: Applications of surface-enhanced fluorescence (SEF) spectroscopy in bio-detection and biosensing. SENSING AND BIO-SENSING RESEARCH 2020; 30:100382. [PMID: 33101976 PMCID: PMC7566769 DOI: 10.1016/j.sbsr.2020.100382] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/06/2020] [Revised: 10/09/2020] [Accepted: 10/14/2020] [Indexed: 12/05/2022] Open
Abstract
Surface-enhanced fluorescence (SEF) is rapidly becoming one of the main spectroscopic techniques for the detection of a variety of biomolecules and biomarkers. The main reasons for this trend are the high sensitivity and selectivity, robustness, and speed of this analytical method. Each year, the number of applications that utilize this phenomenon increases and with each such work, the complexity and novelty of the used substrates, procedures, and analytes rises. To obtain a clearer view of this phenomenon and research area, we decided to combine 76 valuable research articles from a variety of different research groups into this mini-review. We present and describe these works concisely and clearly, with a particular interest in the quantitative parameters of the experiment. These sources are classified according to the nature of the analyte, on the contrary to most reviews, which sort them by substrate nature. This point of view gives us insight into the development of this research area and the consequent increase in the complexity of the analyte nature. Moreover, this type of sorting can show possible future routes for the expansion of this research area. Along with the analytes, we can also pay attention to the substrates used for each situation and how the development of substrates affects the direction of research and subsequently, the choice of an analyte. About 108 sources and several interesting trends in the SEF research area over the past 25 years are discussed in this mini-review.
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Affiliation(s)
| | - Rostislav Bukasov
- Chemistry Department, SSH, Nazarbayev University, Nur-Sultan 010000, Kazakhstan
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4
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Tournier JN, Rougeaux C. Anthrax Toxin Detection: From In Vivo Studies to Diagnostic Applications. Microorganisms 2020; 8:microorganisms8081103. [PMID: 32717946 PMCID: PMC7464488 DOI: 10.3390/microorganisms8081103] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2020] [Revised: 07/19/2020] [Accepted: 07/21/2020] [Indexed: 11/16/2022] Open
Abstract
Anthrax toxins are produced by Bacillus anthracis throughout infection and shape the physiopathogenesis of the disease. They are produced in low quantities but are highly efficient. They have thus been long ignored, but recent biochemical methods have improved our knowledge in animal models. This article reviews the various methods that have been used and how they could be applied to clinical diagnosis.
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Affiliation(s)
- Jean-Nicolas Tournier
- Unité Bactériologie Biothérapies Anti-infectieuses et Immunité, Institut de Recherche Biomédicale des Armées (IRBA), 1 place Général Valérie André, 91220 Brétigny sur Orge, France;
- Centre National de Référence-Laboratoire Expert Charbon, 1 place Général Valérie André, 91220 Brétigny sur Orge, France
- Innovative Vaccine Laboratory, Institut Pasteur, 28 rue du docteur Roux, 75015 Paris, France
- Ecole du Val-de-Grâce, 1 place Alphonse Laveran, 75005 Paris, France
| | - Clémence Rougeaux
- Unité Bactériologie Biothérapies Anti-infectieuses et Immunité, Institut de Recherche Biomédicale des Armées (IRBA), 1 place Général Valérie André, 91220 Brétigny sur Orge, France;
- Centre National de Référence-Laboratoire Expert Charbon, 1 place Général Valérie André, 91220 Brétigny sur Orge, France
- Correspondence: ; Tel.: +33-178-651-891
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5
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Larkin IN, Garimella V, Yamankurt G, Scott AW, Xing H, Mirkin CA. Dual-Readout Sandwich Immunoassay for Device-Free and Highly Sensitive Anthrax Biomarker Detection. Anal Chem 2020; 92:7845-7851. [PMID: 32437125 PMCID: PMC7418077 DOI: 10.1021/acs.analchem.0c01090] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
We report a dual-readout, AuNP-based sandwich immunoassay for the device-free colorimetric and sensitive scanometric detection of disease biomarkers. An AuNP-antibody conjugate serves as a signal transduction and amplification agent by promoting the reduction and deposition of either platinum or gold onto its surface, generating corresponding colorimetric or light scattering (scanometric) signals, respectively. We apply the Pt-based colorimetric readout of this assay to the discovery of a novel monoclonal antibody (mAb) sandwich pair for the detection of an anthrax protective antigen (PA83). The identified antibody pair detects PA83 down to 1 nM in phosphate-buffered saline and 5 nM in human serum, which are physiologically relevant concentrations. Reducing gold rather than platinum onto the mAb-AuNP sandwich enables scanometric detection of subpicomolar PA83 concentrations, over 3 orders of magnitude more sensitive than the colorimetric readout.
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Affiliation(s)
- Isaac N Larkin
- International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60608, United States
- Department of Interdisciplinary Biological Sciences, Northwestern University, 2205 Tech Drive, Evanston, Illinois 60608, United States
| | - Viswanadham Garimella
- International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60608, United States
| | - Gokay Yamankurt
- International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60608, United States
- Department of Interdisciplinary Biological Sciences, Northwestern University, 2205 Tech Drive, Evanston, Illinois 60608, United States
| | - Alexander W Scott
- International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60608, United States
- Department of Biomedical Engineering, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60608, United States
| | - Hang Xing
- International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60608, United States
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60608, United States
| | - Chad A Mirkin
- International Institute for Nanotechnology, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60608, United States
- Department of Chemistry, Northwestern University, 2145 Sheridan Road, Evanston, Illinois 60608, United States
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6
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Lucas E, Knoblauch R, Combs-Bosse M, Broedel SE, Geddes CD. Low-concentration trypsin detection from a metal-enhanced fluorescence (MEF) platform: Towards the development of ultra-sensitive and rapid detection of proteolytic enzymes. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2020; 228:117739. [PMID: 31753644 DOI: 10.1016/j.saa.2019.117739] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2019] [Revised: 10/30/2019] [Accepted: 10/31/2019] [Indexed: 05/29/2023]
Abstract
Proteolytic enzymes, which serve to degrade proteins to their amino acid building blocks, provide a distinct challenge for both diagnostics and biological research fields. Due to their ubiquitous presence in a wide variety of organisms and their involvement in disease, proteases have been identified as biomarkers for various conditions. Additionally, low-levels of proteases may interfere with biological investigation, as contamination with these enzymes can physically alter the protein of interest to researchers, resulting in protein concentration loss or subtler polypeptide clipping that leads to a loss of functionality. Low levels of proteolytic degradation also reduce the shelf-life of commercially important proteins. Many detection platforms have been developed to achieve low-concentration or low-activity detection of proteases, yet many suffer from limitations in analysis time, label stability, and ultimately sensitivity. Herein we demonstrate the potential utility of fluorescein derivatives as fluorescent labels in a new, turn-off enzymatic assay based on the principles of metal-enhanced fluorescence (MEF). For fluorescein sodium salt alone on nano-slivered 96-well plates, or Quanta Plates™, we report up to 11,000x enhancement for fluorophores within the effective coupling or enhancement volume region, defined as ~100 nm from the silver surface. We also report a 9% coefficient of variation, and detection on the picomolar concentration scale. Further, we demonstrate the use of fluorescein isothiocyanate-labeled YebF protein as a coating layer for a MEF-based, Quanta Plate™ enzymatic activity assay using trypsin as the model enzyme. From this MEF assay we achieve a detection limit of ~1.89 ng of enzyme (2.8 mBAEE activity units) which corresponds to a minimum fluorescence signal decrease of 10%. The relative success of this MEF assay sets the foundation for further development and the tuning of MEF platforms for proteolytic enzyme sensing not just for trypsin, but other proteases as well. In addition, we discuss the future development of ultra-fast detection of proteases via microwave-accelerated MEF (MAMEF) detection technologies.
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Affiliation(s)
- Eric Lucas
- Institute of Fluorescence and Department of Chemistry and Biochemistry, University of Maryland Baltimore County, 701 East Pratt Street, Baltimore, MD, 21202, USA
| | - Rachael Knoblauch
- Institute of Fluorescence and Department of Chemistry and Biochemistry, University of Maryland Baltimore County, 701 East Pratt Street, Baltimore, MD, 21202, USA
| | - Mandie Combs-Bosse
- Athena Environmental Sciences, Inc., Bwtech@UMBC South, 1450 S Rolling Rd, Baltimore, MD, 21227, USA
| | - Sheldon E Broedel
- Athena Environmental Sciences, Inc., Bwtech@UMBC South, 1450 S Rolling Rd, Baltimore, MD, 21227, USA
| | - Chris D Geddes
- Institute of Fluorescence and Department of Chemistry and Biochemistry, University of Maryland Baltimore County, 701 East Pratt Street, Baltimore, MD, 21202, USA.
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7
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Santaus TM, Greenberg K, Suri P, Geddes CD. Elucidation of a non-thermal mechanism for DNA/RNA fragmentation and protein degradation when using Lyse-It. PLoS One 2019; 14:e0225475. [PMID: 31790434 PMCID: PMC6886747 DOI: 10.1371/journal.pone.0225475] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2019] [Accepted: 11/05/2019] [Indexed: 01/11/2023] Open
Abstract
Rapid sample preparation is one of the leading bottlenecks to low-cost and efficient sample component detection. To overcome this setback, a technology known as Lyse-It has been developed to rapidly (less than 60 seconds) lyse Gram-positive and-negative bacteria alike, while simultaneously fragmenting DNA/RNA and proteins into tunable sizes. This technology has been used with a variety of organisms, but the underlying mechanism behind how the technology actually works to fragment DNA/RNA and proteins has hitherto been studied. It is generally understood how temperature affects cellular lysing, but for DNA/RNA and protein degradation, the temperature and amount of energy introduced by microwave irradiation of the sample, cannot explain the degradation of the biomolecules to the extent that was being observed. Thus, an investigation into the microwave generation of reactive oxygen species, in particular singlet oxygen, hydroxyl radicals, and superoxide anion radicals, was undertaken. Herein, we probe one aspect, the generation of reactive oxygen species (ROS), which is thought to contribute to a non-thermal mechanism behind biomolecule fragmentation with the Lyse-It technology. By utilizing off/on (Photoinduced electron transfer) PET fluorescent-based probes highly specific for reactive oxygen species, it was found that as oxygen concentration in the sample and/or microwave irradiation power increases, more reactive oxygen species are generated and ultimately, more oxidation and biomolecule fragmentation occurs within the microwave cavity.
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Affiliation(s)
- Tonya M. Santaus
- Chemistry and Biochemistry Department, University of Maryland, Baltimore County, Baltimore, Maryland, United States of America
- Institute of Fluorescence, University of Maryland, Baltimore County, Baltimore, Maryland, United States of America
| | - Ken Greenberg
- Chemistry and Biochemistry Department, University of Maryland, Baltimore County, Baltimore, Maryland, United States of America
| | - Prabhdeep Suri
- Chemistry and Biochemistry Department, University of Maryland, Baltimore County, Baltimore, Maryland, United States of America
| | - Chris D. Geddes
- Chemistry and Biochemistry Department, University of Maryland, Baltimore County, Baltimore, Maryland, United States of America
- Institute of Fluorescence, University of Maryland, Baltimore County, Baltimore, Maryland, United States of America
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8
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Karimi F, Dabbagh S. Gel green fluorescence ssDNA aptasensor based on carbon nanotubes for detection of anthrax protective antigen. Int J Biol Macromol 2019; 140:842-850. [PMID: 31470050 DOI: 10.1016/j.ijbiomac.2019.08.219] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2019] [Revised: 08/16/2019] [Accepted: 08/26/2019] [Indexed: 01/09/2023]
Abstract
Bacillus anthracis, the causative agent of anthrax, is a harmful pathogen with potential ability as a biological weapon which persuades scientists to develop novel methods to detect anthrax from infected resources. In this study, a multi-walled carbon nanotube (MWCNTs)-based fluorescence aptasensor was fabricated to detect the recombinant protective antigen domain 4 (rPAD4) of Bacillus anthracis as the most important key factor in development of anthrax. First, PAD4 was recombinant expressed in E. coli and purified by Ni-NTA column. Second, the affinity of aptamer to rPAD4 was confirmed by ELAA assay. In aptasensor design, the aptamer was labeled with Gel Green and immobilized on MWCNTs. Upon the adsorption of labeled aptamer on MWCNTs, fluorescence emission was quenched. In contrast, by adding rPAD4 to hybridization reaction and incubation for 10 min, the fluorescence emission was significantly recovered to 85% compared to the control. Detection limit for the sensitivity and specificity of the aptasensor was determined 20 ng/ml and 62.5 ng/ml purified and unpurified rPAD4 protein, respectively. Also, applicability of aptasensor was showed in mouse serum sample. Finally, results indicated that nanosensor has the potential to be developed as a high-sensitive, cost-effective and fast-acting system for measuring of PA in anthrax diagnostic tests.
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Affiliation(s)
- Farrokh Karimi
- Department of Biotechnology, Faculty of Science, University of Maragheh, P.O. Box 55181-83111, Maragheh, Iran.
| | - Somayyeh Dabbagh
- Department of Biotechnology, Faculty of Science, University of Maragheh, P.O. Box 55181-83111, Maragheh, Iran
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9
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Yadav S, Rawat G, Pokharia S, Jit S, Mishra H. Excited-State Dynamics of Quinine Sulfate and Its Di-Cation Doped in Polyvinyl Alcohol Thin Films Near Silver Nanostructure Islands. ACS OMEGA 2019; 4:5509-5516. [PMID: 31459712 PMCID: PMC6648009 DOI: 10.1021/acsomega.9b00009] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/02/2019] [Accepted: 03/07/2019] [Indexed: 06/10/2023]
Abstract
The present study demonstrates the near-field effect of silver nanostructure island films (SNIFs) on the photophysics and exited-state dynamics of quinine sulphate (QS) and its di-cation (QSD), doped in polyvinyl alcohol (PVA) films. The results indicate a nearly 3.8-fold enhancement in absorption and 4000-fold enhancement in fluorescence in SNIF-coated QS-doped PVA films, whereas only twofold enhancement in absorption and sevenfold enhancement in fluorescence intensity are found in SNIF-coated QSD-doped PVA films. However, an increase in photostability and a decrease in decay time have been observed in both the SNIF-coated films as compared to their uncoated forms. Further, a decrease in the magnitude of the edge excitation red shift in emission spectra along with a red shift in the La band and a rise in the intensity of the Lb band of excitation is observed in SNIF-coated QSD films because of strong coupling of the Lb band with the surface plasmons of silver nanoparticles. Moreover, X-ray photoelectron spectroscopic measurement of silver nanoparticle-coated QS-PVA films shows no change in 3d3/2 and 3d5/2 transitions of silver, whereas the decrease in energy in these silver transitions in the QSD-PVA system is observed as compared to silver nanoparticle-coated PVA films. These results indicate the formation of a field-governed radiating plasmon and plasmon-coupled unified fluorophore system, respectively. This affects the photophysics of both of the molecules by plasmonic coupling of the Frank-Condon state, solvent relaxation state, and charge-transfer state by different orders of magnitude.
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Affiliation(s)
- Swatantra
Kumar Yadav
- Department
of Physics and Department of Chemistry, MMV, Banaras Hindu
University, Varanasi 221005, India
| | - Gopal Rawat
- Department
of Electronics Engineering, IIT Banaras
Hindu University, Varanasi 221005, India
| | - Sandeep Pokharia
- Department
of Physics and Department of Chemistry, MMV, Banaras Hindu
University, Varanasi 221005, India
| | - Satyabrata Jit
- Department
of Electronics Engineering, IIT Banaras
Hindu University, Varanasi 221005, India
| | - Hirdyesh Mishra
- Department
of Physics and Department of Chemistry, MMV, Banaras Hindu
University, Varanasi 221005, India
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10
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Solano MI, Woolfitt AR, Boyer AE, Lins RC, Isbell K, Gallegos-Candela M, Moura H, Pierce CL, Barr JR. Accurate and selective quantification of anthrax protective antigen in plasma by immunocapture and isotope dilution mass spectrometry. Analyst 2019; 144:2264-2274. [PMID: 30810119 PMCID: PMC7015108 DOI: 10.1039/c8an02479k] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Anthrax protective antigen (83 kDa, PA83) is an essential component of two major binary toxins produced by Bacillus anthracis, lethal toxin (LTx) and edema toxin (ETx). During infection, LTx and ETx contribute to immune collapse, endothelial dysfunction, hemorrhage and high mortality. Following protease cleavage on cell receptors or in circulation, the 20 kDa (PA20) N-terminus is released, activating the 63 kDa (PA63) form which binds lethal factor (LF) and edema factor (EF), facilitating their entry into their cellular targets. Several ELISA-based PA methods previously developed are primarily qualitative or semi-quantitative. Here, we combined protein immunocapture, tryptic digestion and isotope dilution liquid chromatography-mass spectrometry (LC-MS/MS), to develop a highly selective and sensitive method for detection and accurate quantification of total-PA (PA83 + PA63) and PA83. Two tryptic peptides in the 63 kDa region measure total-PA and three in the 20 kDa region measure PA83 alone. Detection limits range from 1.3-2.9 ng mL-1 PA in 100 μL of plasma. Spiked recovery experiments with combinations of PA83, PA63, LF and EF in plasma showed that PA63 and PA83 were quantified accurately against the PA83 standard and that LF and EF did not interfere with accuracy. Applied to a study of inhalation anthrax in rhesus macaques, total-PA suggested triphasic kinetics, similar to that previously observed for LF and EF. This study is the first to report circulating PA83 in inhalation anthrax, typically at less than 4% of the levels of PA63, providing the first evidence that activated PA63 is the primary form of PA throughout infection.
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Affiliation(s)
- Maria I Solano
- Division of Laboratory Sciences, National Center for Environmental Health, Centers for Disease Control and Prevention, 4770 Buford Highway, Atlanta, GA 30341, USA.
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11
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Knoblauch R, Geddes CD. Silvered conical-bottom 96-well plates: enhanced low volume detection and the metal-enhanced fluorescence volume/ratio effect. NANOSCALE 2019; 11:4337-4344. [PMID: 30793146 DOI: 10.1039/c8nr10220a] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
Many diagnostic fluorescence assays are limited by sensitivity (signal/noise) and minimum sample volume requirements. Herein we report a new, silvered conical-bottom 96-well plate platform used to increase the detectability from very small volumes of micromolar concentrations of fluorophores. This technology employs the principles of metal-enhanced fluorescence (MEF), which is the process by which fluorescence emission is amplified in the near-field of plasmonic nanoparticles. By combining the MEF effect with the advantages of a small volume conical well, we report and characterize detectable emission from fluorescent solutions down to 3 microliters in volume. We report enhancement factors for fluorescein and Rhodamine 6G and correlate these factors to the synchronous scattering spectra of the silvered conical wells. Subsequently, we determine corrected enhancement factors and discuss enhancement in terms of the MEF volume ratio effect and per mole of enhanced fluorophore. The research reported herein sets the foundation for future development of even more powerful MEF-based diagnostic assays.
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Affiliation(s)
- Rachael Knoblauch
- Institute of Fluorescence and the Department of Chemistry and Biochemistry, University of Maryland Baltimore County, 701 E Pratt Street, Baltimore, Maryland 21202, USA.
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12
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Knoblauch R, Ra E, Geddes CD. Heavy carbon nanodots 2: plasmon amplification in Quanta Plate™ wells and the correlation with the synchronous scattering spectrum. Phys Chem Chem Phys 2018; 21:1254-1259. [PMID: 30566140 DOI: 10.1039/c8cp06299d] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Brominated carbon nanodots are a new carbon nanostructure that exhibits strong phosphorescence without fixation. Herein we report plasmonic amplification of this phosphorescence in silver-coated Quanta Plate™ wells, a technique called metal-enhanced phosphorescence (MEP). Subsequently we correlate the excitation and emission components of brominated carbon nanodots to their respective enhancement values. These properties are then discussed in relation to the synchronous scattering spectrum of the plasmonic substrate, in the first report of its kind for MEP. These results set the foundation for expanded application of carbon nanodots, as the photophysical characteristics of phosphorescence are improved, and augment the growing understanding of MEP.
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Affiliation(s)
- Rachael Knoblauch
- Institute of Fluorescence and Department of Chemistry and Biochemistry, University of Maryland, Baltimore County, 701 East Pratt Street, Baltimore, Maryland 21202, USA.
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13
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Zhou L, Arugula MA, Chin BA, Simonian AL. Simultaneous Surface Plasmon Resonance/Fluorescence Spectroelectrochemical in Situ Monitoring of Dynamic Changes on Functional Interfaces: A Study of the Electrochemical Proximity Assay Model System. ACS APPLIED MATERIALS & INTERFACES 2018; 10:41763-41772. [PMID: 30379060 DOI: 10.1021/acsami.8b13993] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Understanding the chemical composition and morphology of interfaces plays a vital role in the development of sensors, drug delivery systems, coatings for biomedical implants, and so forth. In many cases, the interface characterization can be performed by a combination of electrochemical and one of the optical techniques. In this study, we further enhanced capabilities in probing interfaces by combining electrochemical characterization with multiple optical techniques, that is, surface plasmon resonance (SPR) and fluorescence spectroscopy. This new combination was utilized to study the electrochemical proximity assay (ECPA)-a recently developed protein recognition strategy for the point-of-care test. The SPR/fluorescence spectroelectrochemical technique has achieved not only recognition of binding components involved in the ECPA model system, estimation of their thicknesses and surface coverages, but more importantly, highly reliable in situ monitoring of dynamic changes of components involved in interfacial binding via cross-validation and confirmation from three simultaneously generated signals-SPR, fluorescence, and electrochemistry. In addition, the obtained corresponding proportions among magnitudes of three signals provide crucial information for future studies on simultaneous characterization of multiple components in one step and differentiation of nonspecific binding events. Another advantage using this technique is that the excitation of fluorescence is not only confined by surface plasmons, but by photons, so the fluorescence information can be also gained as the distance of fluorophores from the surface exceeds the decay length of surface plasmons.
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Affiliation(s)
- Lang Zhou
- Materials Research and Education Center, Department of Mechanical Engineering , Auburn University , Auburn , Alabama 36849 , United States
| | - Mary A Arugula
- Materials Research and Education Center, Department of Mechanical Engineering , Auburn University , Auburn , Alabama 36849 , United States
| | - Bryan A Chin
- Materials Research and Education Center, Department of Mechanical Engineering , Auburn University , Auburn , Alabama 36849 , United States
| | - Aleksandr L Simonian
- Materials Research and Education Center, Department of Mechanical Engineering , Auburn University , Auburn , Alabama 36849 , United States
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Granger JH, Porter MD. The Case for Human Serum as a Highly Preferable Sample Matrix for Detection of Anthrax Toxins. ACS Sens 2018; 3:2303-2310. [PMID: 30350950 DOI: 10.1021/acssensors.8b00566] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
This paper describes preliminary results on the surprising impact of human serum as a sample matrix on the detectability of protective antigen (PA) and lethal factor (LF), two antigenic protein markers of Bacillus anthracis, in a heterogeneous immunometric assay. Two sample matrices were examined: human serum and physiological buffer. Human serum is used as a specimen in the diagnostic testing of potentially infected individuals. Physiological buffers are often applied to the recovery of biomarkers dispersed in suspicious white powders and other suspect specimens and as a serum diluent to combat contributions to the measured test response from nonspecific adsorption. The results of these experiments using a sandwich immunoassay read out by surface-enhanced Raman scattering yielded estimates for the limit of detection (LOD) for both markers when using spiked human serum that were remarkably lower than those of spiked physiological buffer (∼70,000× for PA and ∼25,000× for LF). The difference in LODs is attributed to a degradation in the effectiveness of the capture and/or labeling steps in the immunoassay due to the known propensity for both proteins to denature in buffer. These findings indicate that the use of physiological buffer for serum dilution or recovery from a powdered matrix is counter to the low-level detection of these two antigenic proteins. The potential implications of these results with respect to the ability to detect markers of other pathogenic agents are briefly discussed.
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Santaus TM, Li S, Ladd P, Harvey A, Cole S, Stine OC, Geddes CD. Rapid sample preparation with Lyse-It® for Listeria monocytogenes and Vibrio cholerae. PLoS One 2018; 13:e0201070. [PMID: 30044836 PMCID: PMC6059484 DOI: 10.1371/journal.pone.0201070] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2018] [Accepted: 07/06/2018] [Indexed: 12/13/2022] Open
Abstract
Sample preparation is a leading bottleneck in rapid detection of pathogenic bacteria. Here, we use Lyse-It® for bacterial cellular lysis, genomic DNA fragmentation, and protein release and degradation for both Listeria monocytogenes and Vibrio cholerae. The concept of Lyse-It® employs a conventional microwave and Lyse-It® slides for intensely focused microwave irradiation onto the sample. High microwave power and a <60 second irradiation time allow for rapid cellular lysis and subsequent intracellular component release. The pathogenic bacteria are identified by quantitative polymerase chain reaction (qPCR), which subsequently demonstrates the viability of DNA for amplification post microwave-induced lysis. Intracellular component release, degradation, and detection of L. monocytogenes and V. cholerae has been performed and shown in this paper. These results demonstrate a rapid, low-cost, and efficient way for bacterial sample preparation on both food and water-borne Gram-positive and -negative organisms alike.
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Affiliation(s)
- Tonya M. Santaus
- University of Maryland, Baltimore County, Chemistry and Biochemistry Department, Baltimore, MD, United States of America
- Institute of Fluorescence, University of Maryland, Baltimore County, Baltimore, MD, United States of America
| | - Shan Li
- University of Maryland School of Medicine, Epidemiology and Public Health Department, Baltimore, MD, United States of America
| | - Paula Ladd
- University of Maryland, Baltimore County, Chemistry and Biochemistry Department, Baltimore, MD, United States of America
| | - Amanda Harvey
- University of Maryland, Baltimore County, Chemistry and Biochemistry Department, Baltimore, MD, United States of America
| | - Shannon Cole
- University of Maryland, Baltimore County, Chemistry and Biochemistry Department, Baltimore, MD, United States of America
| | - O. Colin Stine
- University of Maryland School of Medicine, Epidemiology and Public Health Department, Baltimore, MD, United States of America
| | - Chris D. Geddes
- University of Maryland, Baltimore County, Chemistry and Biochemistry Department, Baltimore, MD, United States of America
- Institute of Fluorescence, University of Maryland, Baltimore County, Baltimore, MD, United States of America
- * E-mail:
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Wang Y, Zu X, Yi G, Luo H, Huang H, Song X. Ag Nanowire-Ag Nanoparticle Hybrids for the Highly Enhanced Fluorescene Detection of Protoporphyrin IX Based on Surface Plasmon-Enhanced Fluorescence. CHINESE J CHEM 2016. [DOI: 10.1002/cjoc.201600528] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Sharma MK, Narayanan J, Upadhyay S, Goel AK. Electrochemical immunosensor based on bismuth nanocomposite film and cadmium ions functionalized titanium phosphates for the detection of anthrax protective antigen toxin. Biosens Bioelectron 2015; 74:299-304. [DOI: 10.1016/j.bios.2015.06.015] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2015] [Revised: 06/09/2015] [Accepted: 06/09/2015] [Indexed: 10/23/2022]
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High-sensitivity MALDI-TOF MS quantification of anthrax lethal toxin for diagnostics and evaluation of medical countermeasures. Anal Bioanal Chem 2015; 407:2847-58. [PMID: 25673244 PMCID: PMC4369318 DOI: 10.1007/s00216-015-8509-5] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2014] [Revised: 01/13/2015] [Accepted: 01/21/2015] [Indexed: 11/15/2022]
Abstract
Inhalation anthrax has a rapid progression and high fatality rate. Pathology and death from inhalation of Bacillus anthracis spores are attributed to the actions of secreted protein toxins. Protective antigen (PA) binds and imports the catalytic component lethal factor (LF), a zinc endoprotease, and edema factor (EF), an adenylyl cyclase, into susceptible cells. PA-LF is termed lethal toxin (LTx) and PA-EF, edema toxin. As the universal transporter for both toxins, PA is an important target for vaccination and immunotherapeutic intervention. However, its quantification has been limited to methods of relatively low analytic sensitivity. Quantification of LTx may be more clinically relevant than LF or PA alone because LTx is the toxic form that acts on cells. A method was developed for LTx-specific quantification in plasma using anti-PA IgG magnetic immunoprecipitation of PA and quantification of LF activity that co-purified with PA. The method was fast (<4 h total time to detection), sensitive at 0.033 ng/mL LTx in plasma for the fast analysis (0.0075 ng/mL LTx in plasma for an 18 h reaction), precise (6.3–9.9 % coefficient of variation), and accurate (0.1–12.7 %error; n ≥ 25). Diagnostic sensitivity was 100 % (n = 27 animal/clinical cases). Diagnostic specificity was 100 % (n = 141). LTx was detected post-antibiotic treatment in 6/6 treated rhesus macaques and 3/3 clinical cases of inhalation anthrax and as long as 8 days post-treatment. Over the course of infection in two rhesus macaques, LTx was first detected at 0.101 and 0.237 ng/mL at 36 h post-exposure and increased to 1147 and 12,107 ng/mL in late-stage anthrax. This demonstrated the importance of LTx as a diagnostic and therapeutic target. This method provides a sensitive, accurate tool for anthrax toxin detection and evaluation of PA-directed therapeutics. Method schematic for analysis of anthrax lethal toxin activity by ID-MALDI-TOF MS ![]()
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Green NS, Norton ML. Interactions of DNA with graphene and sensing applications of graphene field-effect transistor devices: a review. Anal Chim Acta 2014; 853:127-142. [PMID: 25467454 DOI: 10.1016/j.aca.2014.10.023] [Citation(s) in RCA: 95] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2014] [Revised: 10/11/2014] [Accepted: 10/14/2014] [Indexed: 02/06/2023]
Abstract
Graphene field-effect transistors (GFET) have emerged as powerful detection platforms enabled by the advent of chemical vapor deposition (CVD) production of the unique atomically thin 2D material on a large scale. DNA aptamers, short target-specific oligonucleotides, are excellent sensor moieties for GFETs due to their strong affinity to graphene, relatively short chain-length, selectivity, and a high degree of analyte variability. However, the interaction between DNA and graphene is not fully understood, leading to questions about the structure of surface-bound DNA, including the morphology of DNA nanostructures and the nature of the electronic response seen from analyte binding. This review critically evaluates recent insights into the nature of the DNA graphene interaction and its affect on sensor viability for DNA, small molecules, and proteins with respect to previously established sensing methods. We first discuss the sorption of DNA to graphene to introduce the interactions and forces acting in DNA based GFET devices and how these forces can potentially affect the performance of increasingly popular DNA aptamers and even future DNA nanostructures as sensor substrates. Next, we discuss the novel use of GFETs to detect DNA and the underlying electronic phenomena that are typically used as benchmarks for characterizing the analyte response of these devices. Finally, we address the use of DNA aptamers to increase the selectivity of GFET sensors for small molecules and proteins and compare them with other, state of the art, detection methods.
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Affiliation(s)
- Nathaniel S Green
- Department of Chemistry, Marshall University, One John Marshall Drive, Huntington, WV 25755, United States
| | - Michael L Norton
- Department of Chemistry, Marshall University, One John Marshall Drive, Huntington, WV 25755, United States.
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Detection of anthrax protective antigen (PA) using europium labeled anti-PA monoclonal antibody and time-resolved fluorescence. J Immunol Methods 2014; 408:78-88. [PMID: 24857756 DOI: 10.1016/j.jim.2014.05.008] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2014] [Revised: 05/05/2014] [Accepted: 05/07/2014] [Indexed: 11/22/2022]
Abstract
Inhalation anthrax is a rare but acute infectious disease following adsorption of Bacillus anthracis spores through the lungs. The disease has a high fatality rate if untreated, but early and correct diagnosis has a significant impact on case patient recovery. The early symptoms of inhalation anthrax are, however, non-specific and current anthrax diagnostics are primarily dependent upon culture and confirmatory real-time PCR. Consequently, there may be a significant delay in diagnosis and targeted treatment. Rapid, culture-independent diagnostic tests are therefore needed, particularly in the context of a large scale emergency response. The aim of this study was to evaluate the ability of monoclonal antibodies to detect anthrax toxin proteins that are secreted early in the course of B. anthracis infection using a time-resolved fluorescence (TRF) immunoassay. We selected monoclonal antibodies that could detect protective antigen (PA), as PA83 and also PA63 and LF in the lethal toxin complex. The assay reliable detection limit (RDL) was 6.63×10(-6)μM (0.551ng/ml) for PA83 and 2.51×10(-5)μM (1.58ng/ml) for PA63. Despite variable precision and accuracy of the assay, PA was detected in 9 out of 10 sera samples from anthrax confirmed case patients with cutaneous (n=7), inhalation (n=2), and gastrointestinal (n=1) disease. Anthrax Immune Globulin (AIG), which has been used in treatment of clinical anthrax, interfered with detection of PA. This study demonstrates a culture-independent method of diagnosing anthrax through the use of monoclonal antibodies to detect PA and LF in the lethal toxin complex.
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Bauch M, Toma K, Toma M, Zhang Q, Dostalek J. Plasmon-Enhanced Fluorescence Biosensors: a Review. PLASMONICS (NORWELL, MASS.) 2014; 9:781-799. [PMID: 27330521 PMCID: PMC4846700 DOI: 10.1007/s11468-013-9660-5] [Citation(s) in RCA: 203] [Impact Index Per Article: 20.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2013] [Accepted: 12/06/2013] [Indexed: 05/18/2023]
Abstract
Surfaces of metallic films and metallic nanoparticles can strongly confine electromagnetic field through its coupling to propagating or localized surface plasmons. This interaction is associated with large enhancement of the field intensity and local optical density of states which provides means to increase excitation rate, raise quantum yield, and control far field angular distribution of fluorescence light emitted by organic dyes and quantum dots. Such emitters are commonly used as labels in assays for detection of chemical and biological species. Their interaction with surface plasmons allows amplifying fluorescence signal (brightness) that accompanies molecular binding events by several orders of magnitude. In conjunction with interfacial architectures for the specific capture of target analyte on a metallic surface, plasmon-enhanced fluorescence (PEF) that is also referred to as metal-enhanced fluorescence (MEF) represents an attractive method for shortening detection times and increasing sensitivity of various fluorescence-based analytical technologies. This review provides an introduction to fundamentals of PEF, illustrates current developments in design of metallic nanostructures for efficient fluorescence signal amplification that utilizes propagating and localized surface plasmons, and summarizes current implementations to biosensors for detection of trace amounts of biomarkers, toxins, and pathogens that are relevant to medical diagnostics and food control.
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Affiliation(s)
- Martin Bauch
- AIT-Austrian Institute of Technology GmbH, Muthgasse 11, Vienna, 1190 Austria
| | - Koji Toma
- AIT-Austrian Institute of Technology GmbH, Muthgasse 11, Vienna, 1190 Austria
- Present Address: Forschungszentrum Jülich GmbH, Jülich, 52425 Germany
| | - Mana Toma
- AIT-Austrian Institute of Technology GmbH, Muthgasse 11, Vienna, 1190 Austria
- Present Address: Forschungszentrum Jülich GmbH, Jülich, 52425 Germany
| | - Qingwen Zhang
- AIT-Austrian Institute of Technology GmbH, Muthgasse 11, Vienna, 1190 Austria
- Present Address: Department of Physical Chemistry, School of Chemistry, BIT-Beijing Institute of Technology, Beijing, 100081 China
| | - Jakub Dostalek
- AIT-Austrian Institute of Technology GmbH, Muthgasse 11, Vienna, 1190 Austria
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Tevell Åberg A, Björnstad K, Hedeland M. Mass Spectrometric Detection of Protein-Based Toxins. Biosecur Bioterror 2013; 11 Suppl 1:S215-26. [DOI: 10.1089/bsp.2012.0072] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Affiliation(s)
- Annica Tevell Åberg
- Annica Tevell Åberg, PhD, is a Senior Researcher; Kristian Björnstad, PhD, is a Senior Researcher; and Mikael Hedeland, PhD, is an Associate Professor and Deputy Head of Department; all at the Department of Chemistry, Environment and Feed Hygiene, National Veterinary Institute (SVA), Uppsala, Sweden. Dr. Åberg and Dr. Hedeland are also affiliated with the Division of Analytical Pharmaceutical Chemistry, Uppsala University, Uppsala, Sweden
| | - Kristian Björnstad
- Annica Tevell Åberg, PhD, is a Senior Researcher; Kristian Björnstad, PhD, is a Senior Researcher; and Mikael Hedeland, PhD, is an Associate Professor and Deputy Head of Department; all at the Department of Chemistry, Environment and Feed Hygiene, National Veterinary Institute (SVA), Uppsala, Sweden. Dr. Åberg and Dr. Hedeland are also affiliated with the Division of Analytical Pharmaceutical Chemistry, Uppsala University, Uppsala, Sweden
| | - Mikael Hedeland
- Annica Tevell Åberg, PhD, is a Senior Researcher; Kristian Björnstad, PhD, is a Senior Researcher; and Mikael Hedeland, PhD, is an Associate Professor and Deputy Head of Department; all at the Department of Chemistry, Environment and Feed Hygiene, National Veterinary Institute (SVA), Uppsala, Sweden. Dr. Åberg and Dr. Hedeland are also affiliated with the Division of Analytical Pharmaceutical Chemistry, Uppsala University, Uppsala, Sweden
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Karolin J, Geddes CD. Metal-enhanced fluorescence based excitation volumetric effect of plasmon-enhanced singlet oxygen and super oxide generation. Phys Chem Chem Phys 2013; 15:15740-5. [PMID: 23873175 DOI: 10.1039/c3cp50950h] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In this contribution we show that the Metal-Enhanced Fluorescence (MEF) Excitation Volumetric Effect (EVE), has a profound effect on the formation of Reactive Oxygen Species (ROS), such as singlet oxygen ((1)O2) and superoxide anion radical (O2(-)*), when sensitizers are placed in close proximity to plasmon supporting nanoparticulate substrates. In particular, when the singlet oxygen sensitizer rose bengal is placed on a SiFs surface, i.e. on a silver island film, the (1)O2 response to power is non-linear, and at 100 mW excitation power (535 nm) it is about 5 times higher, as compared to glass control samples, measured with the commercially available (1)O2 probe Sensor Green™. We also report a similar power dependence of superoxide generation for acridine on SiFs surfaces, but using the dihydroethidium O2(-)* probe (DHE). Our findings are consistent with our previously postulated Metal-Enhanced Fluorescence (MEF) and EVE models.
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Affiliation(s)
- Jan Karolin
- Institute of Fluorescence and Department of Chemistry & Biochemistry, The Columbus Center, University of Maryland Baltimore County, 701 East Pratt Street, Baltimore, MD 21202, USA.
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Kikkeri R, Padler-Karavani V, Diaz S, Verhagen A, Yu H, Cao H, Langereis MA, De Groot RJ, Chen X, Varki A. Quantum dot nanometal surface energy transfer based biosensing of sialic acid compositions and linkages in biological samples. Anal Chem 2013; 85:3864-70. [PMID: 23489180 PMCID: PMC5996995 DOI: 10.1021/ac400320n] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Current methods for analyzing sialic acid diversity in modifications and linkages require multistep processing, derivatization, and chromatographic analyses. We here report a single-step optical method for identification and quantification of different compositions of sialoglycans on glycoproteins and in serum. This was achieved by measuring and quantifying nanometal surface energy transfer (NSET) signals between quantum dots and gold nanoparticles bound to specific sialic acid binding proteins (SBPs) and sialic acid moieties, respectively. The biosensing process is based on the NSET turn-on by external sialic acid species that compete for binding to the SBPs. Selectivity of the biosensor toward sialoglycans can be designed to detect the total amount, glycosylation linkages (α2-6 vs α2-3), and modifications (9-O-acetyl and N-glycolyl groups) in the samples. This nanobiosensor is a prototype expected to achieve limits of the detection down to the micromolar range for high-throughput quantification and analysis of different compositions of sialoglycans present in biological or biomedical samples.
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Affiliation(s)
- Raghavendra Kikkeri
- Glycobiology Research and Training Center, Departments of Medicine and Cellular and Molecular Medicine, University of California, San Diego, La Jolla, California, United States
| | - Vered Padler-Karavani
- Glycobiology Research and Training Center, Departments of Medicine and Cellular and Molecular Medicine, University of California, San Diego, La Jolla, California, United States
| | - Sandra Diaz
- Glycobiology Research and Training Center, Departments of Medicine and Cellular and Molecular Medicine, University of California, San Diego, La Jolla, California, United States
| | - Andrea Verhagen
- Glycobiology Research and Training Center, Departments of Medicine and Cellular and Molecular Medicine, University of California, San Diego, La Jolla, California, United States
| | - Hai Yu
- Department of Chemistry, University of California, Davis, California 95616, United States
| | - Hongzhi Cao
- Department of Chemistry, University of California, Davis, California 95616, United States
| | - Martijn A. Langereis
- Virology Division, Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Yalelaan 1, 3584 CL Utrecht, The Netherlands
| | - Raoul J. De Groot
- Virology Division, Department of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Yalelaan 1, 3584 CL Utrecht, The Netherlands
| | - Xi Chen
- Department of Chemistry, University of California, Davis, California 95616, United States
| | - Ajit Varki
- Glycobiology Research and Training Center, Departments of Medicine and Cellular and Molecular Medicine, University of California, San Diego, La Jolla, California, United States
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Dragan AI, Mali B, Geddes CD. Wavelength-dependent metal-enhanced fluorescence using synchronous spectral analysis. Chem Phys Lett 2013. [DOI: 10.1016/j.cplett.2012.11.035] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
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Darvill D, Centeno A, Xie F. Plasmonic fluorescence enhancement by metal nanostructures: shaping the future of bionanotechnology. Phys Chem Chem Phys 2013; 15:15709-26. [DOI: 10.1039/c3cp50415h] [Citation(s) in RCA: 144] [Impact Index Per Article: 13.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Highly Sensitive Quantitation of Human Serum Albumin in Clinical Samples for Hypoproteinemia using Metal-Enhanced Fluorescence. J Fluoresc 2012; 23:187-92. [DOI: 10.1007/s10895-012-1133-2] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2012] [Accepted: 10/02/2012] [Indexed: 02/07/2023]
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Characterization of a therapeutic model of inhalational anthrax using an increase in body temperature in New Zealand white rabbits as a trigger for treatment. CLINICAL AND VACCINE IMMUNOLOGY : CVI 2012; 19:1517-25. [PMID: 22837095 DOI: 10.1128/cvi.00292-12] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
The development of an appropriate animal therapeutic model is essential to assess the potential efficacy of therapeutics for use in the event of a Bacillus anthracis exposure. We conducted a natural history study that showed New Zealand White rabbits exhibited a significant increase in body temperature (SIBT), changes in hematologic parameters, and increases in C-reactive protein and succumbed to disease with an average time to death of approximately 73 h following aerosol challenge with B. anthracis Ames spores. The SIBT was used as a trigger to treat with a fully human monoclonal antibody directed at protective antigen (PA). Ninety percent (9/10) of the treated rabbits survived the lethal inhalational challenge of B. anthracis. Further characterization investigated the protective window of opportunity for anti-PA antibody administration up to 12 h post-onset of SIBT. Eighty-three percent (5/6) of the rabbits treated at SIBT and 100% (6/6) of those treated at 6 h after SIBT survived challenge. Only 67% (4/6) of the rabbits treated at 12 h after SIBT survived. The increase in body temperature corresponded with both bacteremia and antigenemia (PA in the blood), indicating that SIBT is a suitable trigger to initiate treatment in a therapeutic model of inhalational anthrax.
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