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Yadav AK, Basavegowda N, Shirin S, Raju S, Sekar R, Somu P, Uthappa UT, Abdi G. Emerging Trends of Gold Nanostructures for Point-of-Care Biosensor-Based Detection of COVID-19. Mol Biotechnol 2024:10.1007/s12033-024-01157-y. [PMID: 38703305 DOI: 10.1007/s12033-024-01157-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2024] [Accepted: 03/26/2024] [Indexed: 05/06/2024]
Abstract
In 2019, a worldwide pandemic caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) emerged. SARS-CoV-2 is the deadly microorganism responsible for coronavirus disease 2019 (COVID-19), which has caused millions of deaths and irreversible health problems worldwide. To restrict the spread of SARS-CoV-2, accurate detection of COVID-19 is essential for the identification and control of infected cases. Although recent detection technologies such as the real-time polymerase chain reaction delivers an accurate diagnosis of SARS-CoV-2, they require a long processing duration, expensive equipment, and highly skilled personnel. Therefore, a rapid diagnosis with accurate results is indispensable to offer effective disease suppression. Nanotechnology is the backbone of current science and technology developments including nanoparticles (NPs) that can biomimic the corona and develop deep interaction with its proteins because of their identical structures on the nanoscale. Various NPs have been extensively applied in numerous medical applications, including implants, biosensors, drug delivery, and bioimaging. Among them, point-of-care biosensors mediated with gold nanoparticles (GNPSs) have received great attention due to their accurate sensing characteristics, which are widely used in the detection of amino acids, enzymes, DNA, and RNA in samples. GNPS have reconstructed the biomedical application of biosensors because of its outstanding physicochemical characteristics. This review provides an overview of emerging trends in GNP-mediated point-of-care biosensor strategies for diagnosing various mutated forms of human coronaviruses that incorporate different transducers and biomarkers. The review also specifically highlights trends in gold nanobiosensors for coronavirus detection, ranging from the initial COVID-19 outbreak to its subsequent evolution into a pandemic.
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Affiliation(s)
- Akhilesh Kumar Yadav
- Department of Environmental Engineering and Management, Chaoyang University of Technology, Taichung, 413310, Taiwan
- Department of Mining Engineering, Indian Institute of Technology (Banaras Hindu University), Varanasi, 221005, India
| | - Nagaraj Basavegowda
- Department of Biotechnology, Yeungnam University, Gyeongsan, 38451, Republic of Korea
| | - Saba Shirin
- Department of Mining Engineering, Indian Institute of Technology (Banaras Hindu University), Varanasi, 221005, India
- Department of Environmental Science, School of Vocational Studies and Applied Sciences, Gautam Buddha University, Greater Noida, 201312, India
| | - Shiji Raju
- Bioengineering and Nano Medicine Group, Faculty of Medicine and Health Technology, Tampere University, 33720, Tampere, Finland
| | - Rajkumar Sekar
- Department of Chemistry, Karpaga Vinayaga College of Engineering and Technology, GST Road, Chinna Kolambakkam, Chengalpattu, Tamil Nadu, 603308, India
| | - Prathap Somu
- Department of Biotechnology and Chemical Engineering, School of Civil, Biotechnology and Chemical Engineering, Manipal University Jaipur, Dehmi Kalan, Off. Jaipur-Ajmeer Expressway, Jaipur, Rajasthan, 303007, India.
| | - U T Uthappa
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, 518055, China
- Department of Bioengineering, Saveetha School of Engineering, Saveetha Institute of Medical and Technical Sciences, Chennai, 602105, India
| | - Gholamreza Abdi
- Department of Biotechnology, Persian Gulf Research Institute, Persian Gulf University, Bushehr, 75169, Iran.
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Ahamed S, Mahato M, Tohora N, Sultana T, Sahoo R, Ghanta S, Das SK. A PET and ESIPT-communicated ratiometric, turn-on chromo-fluorogenic sensor for rapid and sensitive detection of sarin gas mimic, diethylchlorophosphate. Talanta 2023; 258:124448. [PMID: 36940571 DOI: 10.1016/j.talanta.2023.124448] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Revised: 03/07/2023] [Accepted: 03/09/2023] [Indexed: 03/14/2023]
Abstract
Fast and precise identification of toxic G-series nerve agents in the solution and vapor phase is urgently needed to save human beings from unwanted wars and terrorist attacks, which is challenging to execute practically. In this article, we have designed and synthesized a sensitive and selective phthalimide-based chromo-fluorogenic sensor, DHAI, by a simple condensation process that shows ratiometric and turns on chromo-fluorogenic behavior towards Sarin gas mimic diethylchlorophosphate (DCP) in liquid and vapor phases, respectively. A colorimetric change, from yellow to colorless, is observed in the DHAI solution due to the introduction of DCP in daylight. A remarkable cyan color photoluminescence enhancement is noticed in the presence of DCP in the DHAI solution, which is observable to the naked under a portable 365 nm UV lamp. The mechanistic aspects of the detection of DCP by employing DHAI have been revealed by time-resolved photoluminescence decay analysis and 1H NMR titration investigation. Our probe DHAI exhibits linear photoluminescence enhancement from 0 to 500 μM with a detection limit of nanomolar range from non-aqueous to semi-aqueous media. For practical utility, a DHAI-stained test kit employing Whatman-41 filter paper has been fabricated and used as a portable and displayable photonic device for on-site detection of Sarin gas surrogate, DCP. Also, a dip-stick experiment has been demonstrated to identify the vapor of Sarin gas mimics DCP colorimetrically and fluorometrically. The concentrations of DCP in various water samples have been evaluated with the help of a standard fluorescence curve for real sample analysis.
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Affiliation(s)
- Sabbir Ahamed
- Department of Chemistry, University of North Bengal, Darjeeling, West Bengal, 734013, India
| | - Manas Mahato
- Department of Chemistry, University of North Bengal, Darjeeling, West Bengal, 734013, India
| | - Najmin Tohora
- Department of Chemistry, University of North Bengal, Darjeeling, West Bengal, 734013, India
| | - Tuhina Sultana
- Department of Chemistry, University of North Bengal, Darjeeling, West Bengal, 734013, India
| | - Rajkumar Sahoo
- Department of Chemistry, Indian Institute of Technology, Kharagpur, 721302, India
| | - Susanta Ghanta
- Department of Chemistry, National Institute of Technology, Agartala, Tripura, 799046, India
| | - Sudhir Kumar Das
- Department of Chemistry, University of North Bengal, Darjeeling, West Bengal, 734013, India.
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Tharani S, Durgalakshmi D, Balakumar S, Rakkesh RA. Futuristic Advancements in Biomass‐Derived Graphene Nanoassemblies: Versatile Biosensors for Point‐of‐Care Devices. ChemistrySelect 2022. [DOI: 10.1002/slct.202203603] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- S. Tharani
- Department of Physics and Nanotechnology SRM Institute of Science and Technology Kattankulathur 603203 TN India
| | - D. Durgalakshmi
- Department of Medical Physics Anna University Chennai 600 025 TN India
- Department of Physics Ethiraj College for Women Chennai 600 008 TN India
| | - S. Balakumar
- National Centre for Nanoscience and Nanotechnology University of Madras Chennai 600 025 TN India
| | - R. Ajay Rakkesh
- Department of Physics and Nanotechnology SRM Institute of Science and Technology Kattankulathur 603203 TN India
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Abstract
Acoustic biosensors are widely used in physical, chemical, and biosensing applications. One of the major concerns in acoustic biosensing is the delicacy of the medium through which acoustic waves propagate and reach acoustic sensors. Even a small airgap diminishes acoustic signal strengths due to high acoustic impedance mismatch. Therefore, the presence of a coupling medium to create a pathway for an efficient propagation of acoustic waves is essential. Here, we have reviewed the chemical, physical, and acoustic characteristics of various coupling material (liquid, gel-based, semi-dry, and dry) and present a guide to determine a suitable application-specific coupling medium.
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Wang D, Chen G, Lyu Y, Feng E, Zhu L, Pan C, Zhang W, Liu X, Wang H. A CRISPR/Cas12a-based DNAzyme visualization system for rapid, non-electrically dependent detection of Bacillus anthracis. Emerg Microbes Infect 2021; 11:428-437. [PMID: 34842509 PMCID: PMC8812752 DOI: 10.1080/22221751.2021.2012091] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
As next-generation pathogen detection methods, CRISPR-Cas-based detection methods can perform single-nucleotide polymorphism (SNP) level detection with high sensitivity and good specificity. They do not require any particular equipment, which opens up new possibilities for the accurate detection and identification of Bacillus anthracis. In this study, we developed a complete detection system for B. anthracis based on Cas12a. We used two chromosomally located SNP targets and two plasmid targets to identify B. anthracis with high accuracy. The CR5 target is completely new. The entire detection process can be completed within 90 min without electrical power and with single-copy level sensitivity. We also developed an unaided-eye visualization system based on G4-DNAzyme for use with our CRISPR-Cas12a detection system. This visualization system has good prospects for deployment in field-based point-of-care detection. We used the antisense nucleic acid CatG4R as the detection probe, which showed stronger resistance to interference from components of the solution. CatG4R can also be designed as an RNA molecule for adaptation to Cas13a detection, thereby broadening the scope of the detection system.
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Affiliation(s)
- Dongshu Wang
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Biotechnology, Beijing 100071, China
| | - Gang Chen
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Biotechnology, Beijing 100071, China
| | - Yufei Lyu
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Biotechnology, Beijing 100071, China
| | - Erling Feng
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Biotechnology, Beijing 100071, China
| | - Li Zhu
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Biotechnology, Beijing 100071, China
| | - Chao Pan
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Biotechnology, Beijing 100071, China
| | - Weicai Zhang
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Biotechnology, Beijing 100071, China
| | - Xiankai Liu
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Biotechnology, Beijing 100071, China
| | - Hengliang Wang
- State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Biotechnology, Beijing 100071, China
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Multiplex Immunoassay Techniques for On-Site Detection of Security Sensitive Toxins. Toxins (Basel) 2020; 12:toxins12110727. [PMID: 33233770 PMCID: PMC7699850 DOI: 10.3390/toxins12110727] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Revised: 11/12/2020] [Accepted: 11/16/2020] [Indexed: 12/12/2022] Open
Abstract
Biological toxins are a heterogeneous group of high molecular as well as low molecular weight toxins produced by living organisms. Due to their physical and logistical properties, biological toxins are very attractive to terrorists for use in acts of bioterrorism. Therefore, among the group of biological toxins, several are categorized as security relevant, e.g., botulinum neurotoxins, staphylococcal enterotoxins, abrin, ricin or saxitoxin. Additionally, several security sensitive toxins also play a major role in natural food poisoning outbreaks. For a prompt response to a potential bioterrorist attack using biological toxins, first responders need reliable, easy-to-use and highly sensitive methodologies for on-site detection of the causative agent. Therefore, the aim of this review is to present on-site immunoassay platforms for multiplex detection of biological toxins. Furthermore, we introduce several commercially available detection technologies specialized for mobile or on-site identification of security sensitive toxins.
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Direct detection of small molecules using a nano-molecular imprinted polymer receptor and a quartz crystal resonator driven at a fixed frequency and amplitude. Biosens Bioelectron 2020; 158:112176. [DOI: 10.1016/j.bios.2020.112176] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2020] [Revised: 03/09/2020] [Accepted: 03/23/2020] [Indexed: 02/06/2023]
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8
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Sailor MJ. Detect to Protect. ACS Sens 2020; 5:1247-1248. [PMID: 32438814 PMCID: PMC7262728 DOI: 10.1021/acssensors.0c00920] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2020] [Indexed: 11/30/2022]
Affiliation(s)
- Michael J. Sailor
- Department of Chemistry and Biochemistry, University of California, San Diego, California, United States
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9
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Zasada AA. Detection and Identification of Bacillus anthracis: From Conventional to Molecular Microbiology Methods. Microorganisms 2020; 8:E125. [PMID: 31963339 PMCID: PMC7023132 DOI: 10.3390/microorganisms8010125] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2019] [Revised: 01/13/2020] [Accepted: 01/15/2020] [Indexed: 02/06/2023] Open
Abstract
Rapid and reliable identification of Bacillus anthracis is of great importance, especially in the event of suspected deliberate release of anthrax spores. However, the identification of B. anthracis is challenging due to its high similarity to closely related species. Since Amerithrax in 2001, a lot of effort has been made to develop rapid methods for detection and identification of this microorganism with special focus on easy-to-perform rapid tests for first-line responders. This article presents an overview of the evolution of B. anthracis identification methods from the time of the first description of the microorganism until the present day.
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Affiliation(s)
- Aleksandra A Zasada
- Department of Sera and Vaccines Evaluation, National Institute of Public Health-National Institute of Hygiene, Chocimska 24, 00-791 Warsaw, Poland
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10
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Synthesis and Surface Modification of Nanostructured F-Doped ZnO: Toward a Transducer for Label-Free Optical Biosensing. APPLIED SCIENCES-BASEL 2019. [DOI: 10.3390/app9163380] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
In this work, the surface of nanostructured fluorine-doped ZnO (nZnO·F) is functionalized with protein A (PrA), and used as a model biomolecule. The chemical procedure is characterized by several analytical techniques such as Fourier Transform Infrared Spectroscopy, water contact angle analysis, and fluorescence microscopy. The surface modification of nZnO·F by binding increasing concentrations of PrA is also investigated by two label-free optical techniques, i.e., the spectroscopic reflectometry and the steady-state photoluminescence. The results are compared with those obtained using undoped nZnO substrates in order to highlight the better performances of nZnO·F due to the fluorine doping. The results of this study pave the way for the design and realization of a ZnO-based nanostructured platform for label-free optical sensing.
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11
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Pohanka M. Current Trends in the Biosensors for Biological Warfare Agents Assay. MATERIALS (BASEL, SWITZERLAND) 2019; 12:E2303. [PMID: 31323857 PMCID: PMC6678440 DOI: 10.3390/ma12142303] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/23/2019] [Revised: 07/16/2019] [Accepted: 07/17/2019] [Indexed: 02/07/2023]
Abstract
Biosensors are analytical devices combining a physical sensor with a part of biological origin providing sensitivity and selectivity toward analyte. Biological warfare agents are infectious microorganisms or toxins with the capability to harm or kill humans. They can be produced and spread by a military or misused by a terrorist group. For example, Bacillus anthracis, Francisella tularensis, Brucella sp., Yersinia pestis, staphylococcal enterotoxin B, botulinum toxin and orthopoxviruses are typical biological warfare agents. Biosensors for biological warfare agents serve as simple but reliable analytical tools for the both field and laboratory assay. There are examples of commercially available biosensors, but research and development of new types continue and their application in praxis can be expected in the future. This review summarizes the facts and role of biosensors in the biological warfare agents' assay, and shows current commercially available devices and trends in research of the news. Survey of actual literature is provided.
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Affiliation(s)
- Miroslav Pohanka
- Faculty of Military Health Sciences, University of Defense, Trebesska 1575, CZ-50001 Hradec Kralove, Czech Republic.
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12
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Su Q, Wu F, Xu P, Dong A, Liu C, Wan Y, Qian W. Interference Effect of Silica Colloidal Crystal Films and Their Applications to Biosensing. Anal Chem 2019; 91:6080-6087. [PMID: 30994327 DOI: 10.1021/acs.analchem.9b00620] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
With the aim to develop better and more reliable interference effective substrates, silica colloidal crystal films with different sphere diameters and film thicknesses were successfully made by an improved vertical deposition method and a systematic investigation of their reflectometric interference spectroscopy (RIfS) properties are presented in this work. The influence of silica sphere diameter and film thickness on the RIfS signals was studied. The results showed that the film thickness is the key factor of RIfS signals. An RIfS system was set up by using a silica colloidal crystal film as an interference effective substrate. The influence of film thickness on the response to refractive index changes of the proposed system was also investigated. When the influence of film thickness on RIfS signals and refractive index response we considered together, silica colloidal crystal films with a thickness between 4 and 6 μm were chosen for sensor construction. Monitoring the digestive process of gelatin with trypsin was also demonstrated by combining gelatin-modified silica colloidal crystal films with RIfS. The system showed excellent sensitivity with a wide linear range and could achieve real-time measurement of each process. It has been proved that this is a promising method to construct biosensors using silica colloidal crystal films as interference-sensitive substrates.
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Affiliation(s)
- Qianqian Su
- State Key Laboratory of Bioelectronics , Southeast University , Nanjing , People's Republic of China
| | - Feng Wu
- State Key Laboratory of Bioelectronics , Southeast University , Nanjing , People's Republic of China
| | - Pengfei Xu
- State Key Laboratory of Bioelectronics , Southeast University , Nanjing , People's Republic of China
| | - Ao Dong
- State Key Laboratory of Bioelectronics , Southeast University , Nanjing , People's Republic of China
| | - Chang Liu
- State Key Laboratory of Bioelectronics , Southeast University , Nanjing , People's Republic of China
| | - Yizhen Wan
- State Key Laboratory of Bioelectronics , Southeast University , Nanjing , People's Republic of China
| | - Weiping Qian
- State Key Laboratory of Bioelectronics , Southeast University , Nanjing , People's Republic of China
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Coudron L, McDonnell MB, Munro I, McCluskey DK, Johnston ID, Tan CK, Tracey MC. Fully integrated digital microfluidics platform for automated immunoassay; A versatile tool for rapid, specific detection of a wide range of pathogens. Biosens Bioelectron 2019; 128:52-60. [DOI: 10.1016/j.bios.2018.12.014] [Citation(s) in RCA: 42] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2018] [Revised: 11/29/2018] [Accepted: 12/11/2018] [Indexed: 11/17/2022]
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14
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Vysloužil J, Vetchý D, Zeman J, Farsa O, Franc A, Gajdziok J, Vysloužil J, Ficeriová K, Kulich P, Kobliha Z, Pitschmann V. Pellet patented technology for fast and distinct visual detection of cholinesterase inhibitors in liquids. J Pharm Biomed Anal 2018; 161:206-213. [DOI: 10.1016/j.jpba.2018.08.050] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2018] [Revised: 08/13/2018] [Accepted: 08/24/2018] [Indexed: 01/14/2023]
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15
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Walper SA, Lasarte Aragonés G, Sapsford KE, Brown CW, Rowland CE, Breger JC, Medintz IL. Detecting Biothreat Agents: From Current Diagnostics to Developing Sensor Technologies. ACS Sens 2018; 3:1894-2024. [PMID: 30080029 DOI: 10.1021/acssensors.8b00420] [Citation(s) in RCA: 88] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Although a fundamental understanding of the pathogenicity of most biothreat agents has been elucidated and available treatments have increased substantially over the past decades, they still represent a significant public health threat in this age of (bio)terrorism, indiscriminate warfare, pollution, climate change, unchecked population growth, and globalization. The key step to almost all prevention, protection, prophylaxis, post-exposure treatment, and mitigation of any bioagent is early detection. Here, we review available methods for detecting bioagents including pathogenic bacteria and viruses along with their toxins. An introduction placing this subject in the historical context of previous naturally occurring outbreaks and efforts to weaponize selected agents is first provided along with definitions and relevant considerations. An overview of the detection technologies that find use in this endeavor along with how they provide data or transduce signal within a sensing configuration follows. Current "gold" standards for biothreat detection/diagnostics along with a listing of relevant FDA approved in vitro diagnostic devices is then discussed to provide an overview of the current state of the art. Given the 2014 outbreak of Ebola virus in Western Africa and the recent 2016 spread of Zika virus in the Americas, discussion of what constitutes a public health emergency and how new in vitro diagnostic devices are authorized for emergency use in the U.S. are also included. The majority of the Review is then subdivided around the sensing of bacterial, viral, and toxin biothreats with each including an overview of the major agents in that class, a detailed cross-section of different sensing methods in development based on assay format or analytical technique, and some discussion of related microfluidic lab-on-a-chip/point-of-care devices. Finally, an outlook is given on how this field will develop from the perspective of the biosensing technology itself and the new emerging threats they may face.
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Affiliation(s)
- Scott A. Walper
- Center for Bio/Molecular Science and Engineering, Code 6900, U.S. Naval Research Laboratory, Washington, D.C. 20375, United States
| | - Guillermo Lasarte Aragonés
- Center for Bio/Molecular Science and Engineering, Code 6900, U.S. Naval Research Laboratory, Washington, D.C. 20375, United States
- College of Science, George Mason University Fairfax, Virginia 22030, United States
| | - Kim E. Sapsford
- OMPT/CDRH/OIR/DMD Bacterial Respiratory and Medical Countermeasures Branch, U.S. Food and Drug Administration, Silver Spring, Maryland 20993, United States
| | - Carl W. Brown
- Center for Bio/Molecular Science and Engineering, Code 6900, U.S. Naval Research Laboratory, Washington, D.C. 20375, United States
- College of Science, George Mason University Fairfax, Virginia 22030, United States
| | - Clare E. Rowland
- Center for Bio/Molecular Science and Engineering, Code 6900, U.S. Naval Research Laboratory, Washington, D.C. 20375, United States
- National Research Council, Washington, D.C. 20036, United States
| | - Joyce C. Breger
- Center for Bio/Molecular Science and Engineering, Code 6900, U.S. Naval Research Laboratory, Washington, D.C. 20375, United States
| | - Igor L. Medintz
- Center for Bio/Molecular Science and Engineering, Code 6900, U.S. Naval Research Laboratory, Washington, D.C. 20375, United States
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16
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Znoyko SL, Orlov AV, Pushkarev AV, Mochalova EN, Guteneva NV, Lunin AV, Nikitin MP, Nikitin PI. Ultrasensitive quantitative detection of small molecules with rapid lateral-flow assay based on high-affinity bifunctional ligand and magnetic nanolabels. Anal Chim Acta 2018; 1034:161-167. [PMID: 30193630 DOI: 10.1016/j.aca.2018.07.012] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2018] [Revised: 07/02/2018] [Accepted: 07/04/2018] [Indexed: 12/20/2022]
Abstract
An ultrasensitive lateral-flow assay is developed for rapid quantitative detection of small molecules on-site. The conceptual novelty, which transfers lateral-flow assays to the category of highly sensitive quantitative systems, is due to employment of a bifunctional ligand combined with volumetric registration of magnetic nanolabels. The ligand provides extremely high affinity for trapping the nanolabels and, simultaneously, efficiently competes with the analyzed molecules for the limited quantity of antigen-binding sites on the nanolabels. The developed assay has been demonstrated as the first express method for measuring in human serum of free thyroxine (fT4). The limit of detection is 20 fМ or 16 fg/ml at the assay time <30 min with the dynamic range of 3 orders. Besides, we present the results of first characterization of kinetic parameters of interaction between free thyroxine and monoclonal antibody, as well as of competitive relationship between fT4 and fT4-biotin. The proposed universal platform can be used for ultrasensitive detection of small molecules in human in vitro diagnostics, veterinary, biosafety and counter-terrorism, food quality control, environmental monitoring, etc., as well as for search of new, previously undetectable, diagnostic markers in medicine.
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Affiliation(s)
- Sergey L Znoyko
- Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St, Moscow, 119991, Russia
| | - Alexey V Orlov
- Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St, Moscow, 119991, Russia; Moscow Institute of Physics and Technology, 9 Institutskii per, Dolgoprudny, Moscow Region, 141700, Russia
| | - Averyan V Pushkarev
- Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St, Moscow, 119991, Russia; Moscow Institute of Physics and Technology, 9 Institutskii per, Dolgoprudny, Moscow Region, 141700, Russia
| | - Elizaveta N Mochalova
- Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St, Moscow, 119991, Russia; Moscow Institute of Physics and Technology, 9 Institutskii per, Dolgoprudny, Moscow Region, 141700, Russia
| | - Natalia V Guteneva
- Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St, Moscow, 119991, Russia; Moscow Institute of Physics and Technology, 9 Institutskii per, Dolgoprudny, Moscow Region, 141700, Russia
| | - Afanasy V Lunin
- Moscow Institute of Physics and Technology, 9 Institutskii per, Dolgoprudny, Moscow Region, 141700, Russia
| | - Maxim P Nikitin
- Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St, Moscow, 119991, Russia; Moscow Institute of Physics and Technology, 9 Institutskii per, Dolgoprudny, Moscow Region, 141700, Russia
| | - Petr I Nikitin
- Prokhorov General Physics Institute of the Russian Academy of Sciences, 38 Vavilov St, Moscow, 119991, Russia; National Research Nuclear University MEPhI (Moscow Engineering Physics Institute), 31 Kashirskoe shosse, Moscow, 115409, Russia.
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17
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Li Z, Zhu C, Guo Z, Wang B, Wu X, Fei Y. Highly Sensitive Label-Free Detection of Small Molecules with an Optofluidic Microbubble Resonator. MICROMACHINES 2018; 9:mi9060274. [PMID: 30424207 PMCID: PMC6187366 DOI: 10.3390/mi9060274] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/08/2018] [Revised: 05/20/2018] [Accepted: 05/29/2018] [Indexed: 01/29/2023]
Abstract
The detection of small molecules has increasingly attracted the attention of researchers because of its important physiological function. In this manuscript, we propose a novel optical sensor which uses an optofluidic microbubble resonator (OFMBR) for the highly sensitive detection of small molecules. This paper demonstrates the binding of the small molecule biotin to surface-immobilized streptavidin with a detection limit reduced to 0.41 pM. Furthermore, binding specificity of four additional small molecules to surface-immobilized streptavidin is shown. A label-free OFMBR-based optical sensor has great potential in small molecule detection and drug screening because of its high sensitivity, low detection limit, and minimal sample consumption.
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Affiliation(s)
- Zihao Li
- Department of Optical Science and Engineering, Shanghai Engineering Research Center of Ultra-Precision Optical Manufacturing, Key Laboratory of Micro and Nano Photonic Structures (Ministry of Education), Fudan University, Shanghai 200433, China.
| | - Chenggang Zhu
- Department of Optical Science and Engineering, Shanghai Engineering Research Center of Ultra-Precision Optical Manufacturing, Key Laboratory of Micro and Nano Photonic Structures (Ministry of Education), Fudan University, Shanghai 200433, China.
| | - Zhihe Guo
- Department of Optical Science and Engineering, Shanghai Engineering Research Center of Ultra-Precision Optical Manufacturing, Key Laboratory of Micro and Nano Photonic Structures (Ministry of Education), Fudan University, Shanghai 200433, China.
| | - Bowen Wang
- Department of Optical Science and Engineering, Shanghai Engineering Research Center of Ultra-Precision Optical Manufacturing, Key Laboratory of Micro and Nano Photonic Structures (Ministry of Education), Fudan University, Shanghai 200433, China.
| | - Xiang Wu
- Department of Optical Science and Engineering, Shanghai Engineering Research Center of Ultra-Precision Optical Manufacturing, Key Laboratory of Micro and Nano Photonic Structures (Ministry of Education), Fudan University, Shanghai 200433, China.
| | - Yiyan Fei
- Department of Optical Science and Engineering, Shanghai Engineering Research Center of Ultra-Precision Optical Manufacturing, Key Laboratory of Micro and Nano Photonic Structures (Ministry of Education), Fudan University, Shanghai 200433, China.
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18
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Kim YH, Hang L, Cifelli JL, Sept D, Mayer M, Yang J. Frequency-Based Analysis of Gramicidin A Nanopores Enabling Detection of Small Molecules with Picomolar Sensitivity. Anal Chem 2018; 90:1635-1642. [DOI: 10.1021/acs.analchem.7b02961] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Affiliation(s)
| | | | | | - David Sept
- Department
of Biomedical Engineering, University of Michigan, Ann Arbor, Michigan 48109-2110, United States
| | - Michael Mayer
- Adolphe
Merkle Institute, University of Fribourg, Chemin des Verdiers 4, 1700 Fribourg, Switzerland
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19
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Zhang S, Geryak R, Geldmeier J, Kim S, Tsukruk VV. Synthesis, Assembly, and Applications of Hybrid Nanostructures for Biosensing. Chem Rev 2017; 117:12942-13038. [DOI: 10.1021/acs.chemrev.7b00088] [Citation(s) in RCA: 206] [Impact Index Per Article: 29.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Shuaidi Zhang
- School of Materials Science
and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, United States
| | - Ren Geryak
- School of Materials Science
and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, United States
| | - Jeffrey Geldmeier
- School of Materials Science
and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, United States
| | - Sunghan Kim
- School of Materials Science
and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, United States
| | - Vladimir V. Tsukruk
- School of Materials Science
and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, United States
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20
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Waller DF, Hew BE, Holdaway C, Jen M, Peckham GD. Rapid Detection of Bacillus anthracis Spores Using Immunomagnetic Separation and Amperometry. BIOSENSORS-BASEL 2016; 6:bios6040061. [PMID: 27999382 PMCID: PMC5192381 DOI: 10.3390/bios6040061] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/24/2016] [Revised: 12/09/2016] [Accepted: 12/14/2016] [Indexed: 01/04/2023]
Abstract
Portable detection and quantitation methods for Bacillus anthracis (anthrax) spores in pure culture or in environmental samples are lacking. Here, an amperometric immunoassay has been developed utilizing immunomagnetic separation to capture the spores and remove potential interferents from test samples followed by amperometric measurement on a field-portable instrument. Antibody-conjugated magnetic beads and antibody-conjugated glucose oxidase were used in a sandwich format for the capture and detection of target spores. Glucose oxidase activity of spore pellets was measured indirectly via amperometry by applying a bias voltage after incubation with glucose, horseradish peroxidase, and the electron mediator 2,2′-azino-bis (3-ethylbenzthiazoline-6-sulphonic acid). Target capture was mediated by polyclonal antisera, whereas monoclonal antibodies were used for signal generation. This strategy maximized sensitivity (500 target spores, 5000 cfu/mL), while also providing a good specificity for Bacillus anthracis spores. Minimal signal deviation occurs in the presence of environmental interferents including soil and modified pH conditions, demonstrating the strengths of immunomagnetic separation. The simultaneous incubation of capture and detection antibodies and rapid substrate development (5 min) result in short sample-to-signal times (less than an hour). With attributes comparable or exceeding that of ELISA and LFDs, amperometry is a low-cost, low-weight, and practical method for detecting anthrax spores in the field.
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Affiliation(s)
- David F Waller
- Black Ivory Biotech, Inc., P.O. Box 893128, Mililani, HI 96789, USA.
| | - Brian E Hew
- Black Ivory Biotech, Inc., P.O. Box 893128, Mililani, HI 96789, USA.
| | - Charlie Holdaway
- Holatron Systems, LLC., 833 Ilaniwai Street, Suite 2, Honolulu, HI 96813, USA.
| | - Michael Jen
- Mike Jen Software Services, 1035 Aster Ave #2103, Sunnyvale, CA 94086, USA.
| | - Gabriel D Peckham
- Black Ivory Biotech, Inc., P.O. Box 893128, Mililani, HI 96789, USA.
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21
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Gabardo CM, Hosseini A, Soleymani L. A New Wrinkle in Biosensors: Wrinkled electrodes could be a breakthrough for lab-on-a-chip devices. IEEE NANOTECHNOLOGY MAGAZINE 2016. [DOI: 10.1109/mnano.2016.2539999] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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22
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Ozkan SA, Uslu B. From mercury to nanosensors: Past, present and the future perspective of electrochemistry in pharmaceutical and biomedical analysis. J Pharm Biomed Anal 2016; 130:126-140. [PMID: 27210510 DOI: 10.1016/j.jpba.2016.05.006] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2016] [Revised: 05/02/2016] [Accepted: 05/03/2016] [Indexed: 02/07/2023]
Abstract
Polarography was the first developed automated method of voltage-controlled electrolysis with dropping mercury electrode (DME). Then, hanging mercury drop and static mercury drop electrodes were added as an alternative indicator electrode. In this way, polarography turned formally into voltammetry with mercury electrodes in the electroreduction way. Solid electrodes such as noble metal and carbon based electrodes can be used for the investigation of the compounds for both oxidation and reduction directions, which is called voltammetry. The voltammetric and polarographic techniques are more sensitive, reproducible, and easily used electroanalytical methods that can be alternative to more frequently used separation and spectrometric methods. Furthermore, in some cases there is a relationship between voltammetry and pharmaceutical samples, and the knowledge of the mechanism of their electrode reactions can give a useful clue in elucidation of the mechanism of their interaction with living cells. The voltammetric and polarographic analysis of drugs in pharmaceutical preparations are by far the most common use of electrochemistry for analytical pharmaceutical problems. Recent trends and challenges in the electrochemical methods for the detection of DNA hybridization and pathogens are available. Low cost, small sample requirement and possibility of miniaturization justifies their increasing development.
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Affiliation(s)
- Sibel A Ozkan
- Ankara University, Faculty of Pharmacy, Department of Analytical Chemistry, 06100 Ankara, Turkey.
| | - Bengi Uslu
- Ankara University, Faculty of Pharmacy, Department of Analytical Chemistry, 06100 Ankara, Turkey
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23
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Das AK, Goswami S, Quah CK, Fun HK. Relay recognition of F−and a nerve-agent mimic diethyl cyano-phosphonate in mixed aqueous media: discrimination of diethyl cyanophosphonate and diethyl chlorophosphate by cyclization induced fluorescence enhancement. RSC Adv 2016. [DOI: 10.1039/c5ra24392k] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
F−to DCNP detection by relay recognition has been designed and realized for the first time with sequence specificity (F−→ DCNP)viaa fluorescence “off–on–on” mechanism.
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Affiliation(s)
- Avijit Kumar Das
- Department of Chemistry
- Indian Institute of Engineering Science and Technology
- Howrah-711 103
- India
| | - Shyamaprosad Goswami
- Department of Chemistry
- Indian Institute of Engineering Science and Technology
- Howrah-711 103
- India
| | - Ching Kheng Quah
- X-ray Crystallography Unit
- School of Physics
- Universiti Sains Malaysia
- Penang
- Malaysia
| | - Hoong-Kun Fun
- X-ray Crystallography Unit
- School of Physics
- Universiti Sains Malaysia
- Penang
- Malaysia
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24
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Microfluidics Integrated Biosensors: A Leading Technology towards Lab-on-a-Chip and Sensing Applications. SENSORS 2015; 15:30011-31. [PMID: 26633409 PMCID: PMC4721704 DOI: 10.3390/s151229783] [Citation(s) in RCA: 231] [Impact Index Per Article: 25.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/22/2015] [Revised: 09/16/2015] [Accepted: 11/02/2015] [Indexed: 12/13/2022]
Abstract
A biosensor can be defined as a compact analytical device or unit incorporating a biological or biologically derived sensitive recognition element immobilized on a physicochemical transducer to measure one or more analytes. Microfluidic systems, on the other hand, provide throughput processing, enhance transport for controlling the flow conditions, increase the mixing rate of different reagents, reduce sample and reagents volume (down to nanoliter), increase sensitivity of detection, and utilize the same platform for both sample preparation and detection. In view of these advantages, the integration of microfluidic and biosensor technologies provides the ability to merge chemical and biological components into a single platform and offers new opportunities for future biosensing applications including portability, disposability, real-time detection, unprecedented accuracies, and simultaneous analysis of different analytes in a single device. This review aims at representing advances and achievements in the field of microfluidic-based biosensing. The review also presents examples extracted from the literature to demonstrate the advantages of merging microfluidic and biosensing technologies and illustrate the versatility that such integration promises in the future biosensing for emerging areas of biological engineering, biomedical studies, point-of-care diagnostics, environmental monitoring, and precision agriculture.
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25
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Shi S, Reisberg S, Anquetin G, Noël V, Pham M, Piro B. General approach for electrochemical detection of persistent pharmaceutical micropollutants: Application to acetaminophen. Biosens Bioelectron 2015; 72:205-10. [DOI: 10.1016/j.bios.2015.05.010] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2015] [Revised: 05/02/2015] [Accepted: 05/05/2015] [Indexed: 11/17/2022]
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26
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Romero-Arcos M, Garnica-Romo MG, Martinez-Flores HE, Vázquez-Marrufo G, Ramírez-Bon R, González-Hernández J, Barbosa-Cánovas GV. Enzyme Immobilization by Amperometric Biosensors with TiO2 Nanoparticles Used to Detect Phenol Compounds. FOOD ENGINEERING REVIEWS 2015. [DOI: 10.1007/s12393-015-9129-8] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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27
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Zasada AA, Formińska K, Zacharczuk K, Jacob D, Grunow R. Comparison of eleven commercially available rapid tests for detection of Bacillus anthracis, Francisella tularensis and Yersinia pestis. Lett Appl Microbiol 2015; 60:409-13. [PMID: 25598285 DOI: 10.1111/lam.12392] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2014] [Revised: 01/08/2015] [Accepted: 01/08/2015] [Indexed: 11/30/2022]
Abstract
UNLABELLED Yersinia pestis, Bacillus anthracis and Francisella tularensis cause serious zoonotic diseases and have the potential to cause high morbidity and mortality in humans. In case of natural outbreaks and deliberate or accidental release of these pathogens rapid detection of the bacteria is crucial for limitation of negative effects of the release. In the present study, we evaluated 11 commercially available rapid test kits for the detection of Y. pestis, B. anthracis and F. tularensis in terms of sensitivity, specificity and simplicity of the procedure. The results revealed that rapid and easy-to-perform lateral flow assays for detection of highly pathogenic bacteria have very limited sensitivity. In contrast, the immunofiltration assays showed high sensitivity but limited specificity and required a too complicated procedure to be applied in the field by nonlaboratory workers (e.g. First Responders like fire, police and emergency medical personnel). Each sample - whether tested negative or positive by the rapid tests - should be retested in a reference laboratory using validated methods. SIGNIFICANCE AND IMPACT OF THE STUDY Rapid detection of highly pathogenic bacteria causing anthrax, plague and tularemia is crucial for the limitation of negative effects of a potential release (natural, accidental or deliberate). In the study, commercially available rapid tests for detection of Bacillus anthracis, Yersinia pestis and Francisella tularensis were investigated in terms of sensitivity, specificity and ease-to-perform. The study showed problems which could be faced during testing and results interpretation. Conclusions from this study should be helpful not only in selection of the most appropriate test for particular group of First Responders but also in undertaking decisions in situation of a contamination suspicion which have high social and economical impacts.
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Affiliation(s)
- A A Zasada
- Department of Bacteriology, National Institute of Public Health - National Institute of Hygiene, Warsaw, Poland
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28
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High-conductive nanostructures in biochemical studies: fluorescence enhan. BIOTECHNOLOGIA ACTA 2015. [DOI: 10.15407/biotech8.05.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
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29
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Hu XX, Su YT, Ma YW, Zhan XQ, Zheng H, Jiang YB. A near infrared colorimetric and fluorometric probe for organophosphorus nerve agent mimics by intramolecular amidation. Chem Commun (Camb) 2015; 51:15118-21. [DOI: 10.1039/c5cc04630k] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
A carboxylic acid group was activated by nerve agent mimics to conduct intramolecular amidation in heptamethine chromophore, leading to large red-shifts of both absorption and excitation wavelengths in the near infrared region.
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Affiliation(s)
- Xiao-Xiao Hu
- Department of Chemistry
- College of Chemistry and Chemical Engineering, and the MOE Key Laboratory of Physical Laboratory of Spectrochemical Analysis & Instrumentation
- Xiamen University
- Xiamen
- China
| | - Yue-Ting Su
- Department of Chemistry
- College of Chemistry and Chemical Engineering, and the MOE Key Laboratory of Physical Laboratory of Spectrochemical Analysis & Instrumentation
- Xiamen University
- Xiamen
- China
| | - Yun-Wei Ma
- Department of Chemistry
- College of Chemistry and Chemical Engineering, and the MOE Key Laboratory of Physical Laboratory of Spectrochemical Analysis & Instrumentation
- Xiamen University
- Xiamen
- China
| | - Xin-Qi Zhan
- Basic Medicine Department
- Medical College of Xiamen University
- Xiamen
- China
| | - Hong Zheng
- Department of Chemistry
- College of Chemistry and Chemical Engineering, and the MOE Key Laboratory of Physical Laboratory of Spectrochemical Analysis & Instrumentation
- Xiamen University
- Xiamen
- China
| | - Yun-Bao Jiang
- Department of Chemistry
- College of Chemistry and Chemical Engineering, and the MOE Key Laboratory of Physical Laboratory of Spectrochemical Analysis & Instrumentation
- Xiamen University
- Xiamen
- China
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30
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Love-wave sensors combined with microfluidics for fast detection of biological warfare agents. SENSORS 2014; 14:12658-69. [PMID: 25029282 PMCID: PMC4168433 DOI: 10.3390/s140712658] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/01/2014] [Revised: 07/02/2014] [Accepted: 07/03/2014] [Indexed: 01/27/2023]
Abstract
The following paper examines a time-efficient method for detecting biological warfare agents (BWAs). The method is based on a system of a Love-wave immunosensor combined with a microfluidic chip which detects BWA samples in a dynamic mode. In this way a continuous flow-through of the sample is created, promoting the reaction between antigen and antibody and allowing a fast detection of the BWAs. In order to prove this method, static and dynamic modes have been simulated and different concentrations of BWA simulants have been tested with two immunoreactions: phage M13 has been detected using the mouse monoclonal antibody anti-M13 (AM13), and the rabbit immunoglobulin (Rabbit IgG) has been detected using the polyclonal antibody goat anti-rabbit (GAR). Finally, different concentrations of each BWA simulants have been detected with a fast response time and a desirable level of discrimination among them has been achieved.
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31
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Ahmed A, Rushworth JV, Hirst NA, Millner PA. Biosensors for whole-cell bacterial detection. Clin Microbiol Rev 2014; 27:631-46. [PMID: 24982325 PMCID: PMC4135896 DOI: 10.1128/cmr.00120-13] [Citation(s) in RCA: 349] [Impact Index Per Article: 34.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022] Open
Abstract
Bacterial pathogens are important targets for detection and identification in medicine, food safety, public health, and security. Bacterial infection is a common cause of morbidity and mortality worldwide. In spite of the availability of antibiotics, these infections are often misdiagnosed or there is an unacceptable delay in diagnosis. Current methods of bacterial detection rely upon laboratory-based techniques such as cell culture, microscopic analysis, and biochemical assays. These procedures are time-consuming and costly and require specialist equipment and trained users. Portable stand-alone biosensors can facilitate rapid detection and diagnosis at the point of care. Biosensors will be particularly useful where a clear diagnosis informs treatment, in critical illness (e.g., meningitis) or to prevent further disease spread (e.g., in case of food-borne pathogens or sexually transmitted diseases). Detection of bacteria is also becoming increasingly important in antibioterrorism measures (e.g., anthrax detection). In this review, we discuss recent progress in the use of biosensors for the detection of whole bacterial cells for sensitive and earlier identification of bacteria without the need for sample processing. There is a particular focus on electrochemical biosensors, especially impedance-based systems, as these present key advantages in terms of ease of miniaturization, lack of reagents, sensitivity, and low cost.
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Affiliation(s)
- Asif Ahmed
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, United Kingdom
| | - Jo V Rushworth
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, United Kingdom
| | - Natalie A Hirst
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, United Kingdom
| | - Paul A Millner
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, United Kingdom
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32
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Kelly RP, Port JA, Yamahara KM, Martone RG, Lowell N, Thomsen PF, Mach ME, Bennett M, Prahler E, Caldwell MR, Crowder LB. Environmental monitoring. Harnessing DNA to improve environmental management. Science 2014; 344:1455-6. [PMID: 24970068 DOI: 10.1126/science.1251156] [Citation(s) in RCA: 107] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Affiliation(s)
- Ryan P Kelly
- School of Marine and Environmental Affairs, University of Washington, Seattle, WA 98103, USA. Center for Ocean Solutions, Stanford University, Stanford, CA 94305, USA.
| | - Jesse A Port
- Center for Ocean Solutions, Stanford University, Stanford, CA 94305, USA
| | - Kevan M Yamahara
- Center for Ocean Solutions, Stanford University, Stanford, CA 94305, USA
| | - Rebecca G Martone
- Center for Ocean Solutions, Stanford University, Stanford, CA 94305, USA
| | - Natalie Lowell
- School of Marine and Environmental Affairs, University of Washington, Seattle, WA 98103, USA
| | - Philip Francis Thomsen
- Centre for GeoGenetics, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark
| | - Megan E Mach
- Center for Ocean Solutions, Stanford University, Stanford, CA 94305, USA
| | - Meredith Bennett
- Center for Ocean Solutions, Stanford University, Stanford, CA 94305, USA
| | - Erin Prahler
- Center for Ocean Solutions, Stanford University, Stanford, CA 94305, USA
| | | | - Larry B Crowder
- Center for Ocean Solutions, Stanford University, Stanford, CA 94305, USA
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33
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Osmekhina E, Shvetsova A, Ruottinen M, Neubauer P. Quantitative and sensitive RNA based detection of Bacillus spores. Front Microbiol 2014; 5:92. [PMID: 24653718 PMCID: PMC3949131 DOI: 10.3389/fmicb.2014.00092] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2014] [Accepted: 02/19/2014] [Indexed: 11/13/2022] Open
Abstract
The fast and reliable detection of bacterial spores is of great importance and still remains a challenge. Here we describe a direct RNA-based diagnostic method for the specific detection of viable bacterial spores which does not depends on an enzymatic amplification step and therefore is directly appropriate for quantification. The procedure includes the following steps: (i) heat activation of spores, (ii) germination and enrichment cultivation, (iii) cell lysis, and (iv) analysis of 16S rRNA in crude cell lysates using a sandwich hybridization assay. The sensitivity of the method is dependent on the cultivation time and the detection limit; it is possible to detect 10 spores per ml when the RNA analysis is performed after 6 h of enrichment cultivation. At spore concentrations above 10(6) spores per ml the cultivation time can be shortened to 30 min. Total analysis times are in the range of 2-8 h depending on the spore concentration in samples. The developed procedure is optimized at the example of Bacillus subtilis spores but should be applicable to other organisms. The new method can easily be modified for other target RNAs and is suitable for specific detection of spores from known groups of organisms.
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Affiliation(s)
- Ekaterina Osmekhina
- Department of Process and Environmental Engineering and Biocenter Oulu, University of Oulu Oulu, Finland
| | - Antonina Shvetsova
- Department of Biochemistry and Biocenter Oulu, University of Oulu Oulu, Finland
| | - Maria Ruottinen
- Department of Process and Environmental Engineering and Biocenter Oulu, University of Oulu Oulu, Finland
| | - Peter Neubauer
- Department of Process and Environmental Engineering and Biocenter Oulu, University of Oulu Oulu, Finland ; Laboratory of Bioprocess Engineering, Department of Biotechnology, Technische Universität Berlin Berlin, Germany
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34
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Yáñez-Sedeño P, Agüí L, Villalonga R, Pingarrón JM. Biosensors in forensic analysis. A review. Anal Chim Acta 2014; 823:1-19. [PMID: 24746348 DOI: 10.1016/j.aca.2014.03.011] [Citation(s) in RCA: 60] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2013] [Revised: 03/09/2014] [Accepted: 03/11/2014] [Indexed: 02/04/2023]
Abstract
Forensic analysis is an important branch of modern Analytical Chemistry with many legal and socially relevant implications. Biosensors can play an important role as efficient tools in this field considering their well known advantages of sensitivity, selectivity, easy functioning, affordability and capability of miniaturization and automation. This article reviews the latest advances in the use of biosensors for forensic analysis. The different methodologies for the transduction of the produced biological events are considered and the applications to forensic toxicological analysis, classified by the nature of the target analytes, as well as those related with chemical and biological weapons critically commented. The article provides several Tables where the more relevant analytical characteristics of the selected reported methods are gathered.
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Affiliation(s)
- P Yáñez-Sedeño
- University Complutense, Department of Analytical Chemistry, Faculty of Chemistry, Ciudad Universitaria, Madrid 28040, Spain.
| | - L Agüí
- University Complutense, Department of Analytical Chemistry, Faculty of Chemistry, Ciudad Universitaria, Madrid 28040, Spain
| | - R Villalonga
- University Complutense, Department of Analytical Chemistry, Faculty of Chemistry, Ciudad Universitaria, Madrid 28040, Spain
| | - J M Pingarrón
- University Complutense, Department of Analytical Chemistry, Faculty of Chemistry, Ciudad Universitaria, Madrid 28040, Spain
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35
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Balakrishna K, Tuteja U, Murali H, Batra HV. Application of r-PFE hyperimmune sera for concurrent detection of Bacillus anthracis, Yersinia pestis
and staphylococcal enterotoxin B. J Appl Microbiol 2014; 116:1465-73. [DOI: 10.1111/jam.12465] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2013] [Revised: 01/30/2014] [Accepted: 01/30/2014] [Indexed: 11/30/2022]
Affiliation(s)
- K. Balakrishna
- Division of Microbiology; Defence Food Research Laboratory; Mysore India
| | - U. Tuteja
- Division of Microbiology; Defence Research and Development Establishment; Gwalior India
| | - H.S. Murali
- Division of Microbiology; Defence Food Research Laboratory; Mysore India
| | - H. V. Batra
- Division of Microbiology; Defence Food Research Laboratory; Mysore India
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36
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Szkola A, Linares EM, Worbs S, Dorner BG, Dietrich R, Märtlbauer E, Niessner R, Seidel M. Rapid and simultaneous detection of ricin, staphylococcal enterotoxin B and saxitoxin by chemiluminescence-based microarray immunoassay. Analyst 2014; 139:5885-92. [DOI: 10.1039/c4an00345d] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
Simultaneous detection of proteotoxins, ricin and SEB, and small toxin, STX, on a chemiluminescence-based microarray using anti-idiotypic antibody for STX.
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Affiliation(s)
- A. Szkola
- Chair for Analytical Chemistry & Institute of Hydrochemistry
- TU München
- 81377 Munich, Germany
| | - E. M. Linares
- Chair for Analytical Chemistry & Institute of Hydrochemistry
- TU München
- 81377 Munich, Germany
| | - S. Worbs
- Centre for Biological Threats and Special Pathogens
- Biological Toxins
- Robert Koch-Institut
- 13353 Berlin, Germany
| | - B. G. Dorner
- Centre for Biological Threats and Special Pathogens
- Biological Toxins
- Robert Koch-Institut
- 13353 Berlin, Germany
| | - R. Dietrich
- Chair of Hygiene and Technology of Milk
- LMU München
- 85764 Oberschleißheim, Germany
| | - E. Märtlbauer
- Chair of Hygiene and Technology of Milk
- LMU München
- 85764 Oberschleißheim, Germany
| | - R. Niessner
- Chair for Analytical Chemistry & Institute of Hydrochemistry
- TU München
- 81377 Munich, Germany
| | - M. Seidel
- Chair for Analytical Chemistry & Institute of Hydrochemistry
- TU München
- 81377 Munich, Germany
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Gotor R, Gaviña P, Ochando LE, Chulvi K, Lorente A, Martínez-Máñez R, Costero AM. BODIPY dyes functionalized with 2-(2-dimethylaminophenyl)ethanol moieties as selective OFF–ON fluorescent chemodosimeters for the nerve agent mimics DCNP and DFP. RSC Adv 2014. [DOI: 10.1039/c4ra00710g] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Hand held sensing kits for detecting nerve agents simulants.
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Affiliation(s)
- Raúl Gotor
- Centro de Reconocimiento Molecular y Desarrollo Tecnológico (IDM)
- Universidad de Valencia
- Valencia, Spain
| | - Pablo Gaviña
- Centro de Reconocimiento Molecular y Desarrollo Tecnológico (IDM)
- Universidad de Valencia
- Valencia, Spain
| | - Luis E. Ochando
- Centro de Reconocimiento Molecular y Desarrollo Tecnológico
- Unidad Mixta Universidad de Valencia – Universidad Politécnica de Valencia
- Departamento de Geología
- Facultad de Ciencias Biológicas
- Universidad de Valencia
| | - Katherine Chulvi
- Centro de Reconocimiento Molecular y Desarrollo Tecnológico (IDM)
- Universidad de Valencia
- Valencia, Spain
| | - Alejandro Lorente
- Centro de Reconocimiento Molecular y Desarrollo Tecnológico (IDM)
- Universidad de Valencia
- Valencia, Spain
| | - Ramón Martínez-Máñez
- Centro de Reconocimiento Molecular y Desarrollo Tecnológico
- Unidad Mixta Universidad Politécnica de Valencia – Universidad de Valencia Departamento de Química
- Universidad Politécnica de Valencia Camino de Vera s/n
- Valencia, Spain
| | - Ana M. Costero
- Centro de Reconocimiento Molecular y Desarrollo Tecnológico (IDM)
- Universidad de Valencia
- Valencia, Spain
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38
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Syed MA. Advances in nanodiagnostic techniques for microbial agents. Biosens Bioelectron 2014; 51:391-400. [DOI: 10.1016/j.bios.2013.08.010] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2013] [Revised: 07/12/2013] [Accepted: 08/07/2013] [Indexed: 12/19/2022]
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39
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Goud DR, Pardasani D, Tak V, Dubey DK. A highly selective visual detection of tabun mimic diethyl cyanophosphate (DCNP): effective discrimination of DCNP from other nerve agent mimics. RSC Adv 2014. [DOI: 10.1039/c4ra02742f] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023] Open
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40
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He X, Wang G, Xu G, Zhu Y, Chen L, Zhang X. A simple, fast, and sensitive assay for the detection of DNA, thrombin, and adenosine triphosphate based on Dual-Hairpin DNA structure. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2013; 29:14328-14334. [PMID: 24079405 DOI: 10.1021/la403192p] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
In the present study, based on multifunctional Dual-Hairpin DNA structure, a simple, fast and high sensitive assay for the detection of DNA, thrombin and adenosine triphosphate (ATP) was demonstrated. DNA sequence labeled with methylene blue (MB), which was designed as single-stranded DNA (ssDNA) matching with target DNA, thrombin, or ATP aptamer, hybridized to the adjunct probe and formed the dual-hairpin structure on the electrode. With the hybridization of adjunct probe and the hairpin-like capture probe in the stem region, the dual-hairpin was formed with outer and inner hairpins. By the conjugation of the target probe with the adjunct probe in the outer hairpin, the adjunct probe divorced from the dual-hairpin structure. The adjunct probe with signal molecules MB, attaching near or divorcing far from the electrode, produced electrochemical signal change and efficient electron transfer due to the fact that it was in proximity to the electrode. However, upon hybridization with the perfect match target, the redox label with the target probe was forced away from the modified electrode, thus resulting in the change of the Dual-Hairpin DNA conformation, which enables impedance of the efficient electron transfer of MB and, consequently, a detectable change of the electrochemical response. In addition, another highlight of this biosensor is its regenerability and stability owing to the merits of structure. Also, based on this Dual-Hairpin platform, the detection limits of DNA, thrombin, and ATP were 50 nM, 3 pM, and 30 nM, respectively. Moreover, this pattern also demonstrated excellent regenerability, reproducibility, and stability. Additionally, given to its ease-of-use, simplicity in design, easy operations, as well as regenerability and stability, the proposed approach may be applied as an excellent design prompter in the preparation of other molecular sensors.
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Affiliation(s)
- Xiuping He
- Key Laboratory of Chem-Biosensing, Anhui province; Key Laboratory of Functional Molecular Solids, Anhui province; College of Chemistry and Materials Science, Anhui Normal University , Wuhu 241000, People's Republic of China
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41
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Sheikh S, Blaszykowski C, Thompson M. Sacrificial BSA to block non-specific adsorption on organosilane adlayers in ultra-high frequency acoustic wave sensing. SURF INTERFACE ANAL 2013. [DOI: 10.1002/sia.5322] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Affiliation(s)
- Sonia Sheikh
- University of Toronto; Department of Chemistry; 80 St. George Street; Toronto; Ontario; Canada; M5S 3H6
| | - Christophe Blaszykowski
- University of Toronto; Department of Chemistry; 80 St. George Street; Toronto; Ontario; Canada; M5S 3H6
| | - Michael Thompson
- University of Toronto; Department of Chemistry; 80 St. George Street; Toronto; Ontario; Canada; M5S 3H6
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42
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Kim DJ, Park HC, Sohn IY, Jung JH, Yoon OJ, Park JS, Yoon MY, Lee NE. Electrical graphene aptasensor for ultra-sensitive detection of anthrax toxin with amplified signal transduction. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2013; 9:3352-3360. [PMID: 23589198 DOI: 10.1002/smll.201203245] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/26/2012] [Revised: 01/23/2013] [Indexed: 06/02/2023]
Abstract
Detection of the anthrax toxin, the protective antigen (PA), at the attomolar (aM) level is demonstrated by an electrical aptamer sensor based on a chemically derived graphene field-effect transistor (FET) platform. Higher affinity of the aptamer probes to PA in the aptamer-immobilized FET enables significant improvements in the limit of detection (LOD), dynamic range, and sensitivity compared to the antibody-immobilized FET. Transduction signal enhancement in the aptamer FET due to an increase in captured PA molecules results in a larger 30 mV/decade shift in the charge neutrality point (Vg,min ) as a sensitivity parameter, with the dynamic range of the PA concentration between 12 aM (LOD) and 120 fM. An additional signal enhancement is obtained by the secondary aptamer-conjugated gold nanoparticles (AuNPs-aptamer), which have a sandwich structure of aptamer/PA/aptamer-AuNPs, induce an increase in charge-doping in the graphene channel, resulting in a reduction of the LOD to 1.2 aM with a three-fold increase in the Vg,min shift.
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Affiliation(s)
- Duck-Jin Kim
- Department of Chemistry, Hanyang University, Seoul 133-791, Korea
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43
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Demchenko AP, Dekaliuk MO. Novel fluorescent carbonic nanomaterials for sensing and imaging. Methods Appl Fluoresc 2013; 1:042001. [DOI: 10.1088/2050-6120/1/4/042001] [Citation(s) in RCA: 113] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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44
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Martí A, Costero AM, Gaviña P, Gil S, Parra M, Brotons-Gisbert M, Sánchez-Royo JF. Functionalized Gold Nanoparticles as an Approach to the Direct Colorimetric Detection of DCNP Nerve Agent Simulant. European J Org Chem 2013. [DOI: 10.1002/ejoc.201300339] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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45
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Demchenko AP. Nanoparticles and nanocomposites for fluorescence sensing and imaging. Methods Appl Fluoresc 2013; 1:022001. [DOI: 10.1088/2050-6120/1/2/022001] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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46
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Automated thermochemolysis reactor for detection of Bacillus anthracis endospores by gas chromatography–mass spectrometry. Anal Chim Acta 2013; 775:67-74. [DOI: 10.1016/j.aca.2013.03.011] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2013] [Revised: 02/28/2013] [Accepted: 03/03/2013] [Indexed: 11/23/2022]
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47
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Liu Y, Du Y, Li CM. Direct Electrochemistry Based Biosensors and Biofuel Cells Enabled with Nanostructured Materials. ELECTROANAL 2013. [DOI: 10.1002/elan.201200555] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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48
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Erden PE, Kılıç E. A review of enzymatic uric acid biosensors based on amperometric detection. Talanta 2013; 107:312-23. [DOI: 10.1016/j.talanta.2013.01.043] [Citation(s) in RCA: 108] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2012] [Revised: 01/14/2013] [Accepted: 01/16/2013] [Indexed: 12/13/2022]
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49
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HUEBNER M, WUTZ K, SZKOLA A, NIESSNER R, SEIDEL M. A Glyco-chip for the Detection of Ricin by an Automated Chemiluminescence Read-out System. ANAL SCI 2013; 29:461-6. [DOI: 10.2116/analsci.29.461] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Affiliation(s)
- Maria HUEBNER
- Chair of Analytical Chemistry and Institute of Hydrochemistry, Technical University of Munich
| | - Klaus WUTZ
- Chair of Analytical Chemistry and Institute of Hydrochemistry, Technical University of Munich
| | - Agathe SZKOLA
- Chair of Analytical Chemistry and Institute of Hydrochemistry, Technical University of Munich
| | - Reinhard NIESSNER
- Chair of Analytical Chemistry and Institute of Hydrochemistry, Technical University of Munich
| | - Michael SEIDEL
- Chair of Analytical Chemistry and Institute of Hydrochemistry, Technical University of Munich
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50
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Kumar H, Rani R. Development of biosensors for the detection of biological warfare agents: its issues and challenges. Sci Prog 2013; 96:294-308. [PMID: 24244972 PMCID: PMC10365506 DOI: 10.3184/003685013x13777066241280] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
This review discusses current development in biosensors for the detection of biological warfare agents (BWAs). BWAs include bacteria, virus and toxins that are added deliberately into air water and food to spread terrorism and cause disease or death. The rapid and unambiguous detection and identification of BWAs with early warning signals for detecting possible biological attack is a major challenge for government agencies particularly military and health. The detection devices--biosensors--can be classified (according to their physicochemical transducers) into four types: electrochemical, nucleic acid, optical and piezoelectric. Advantages and limitations of biosensors are discussed in this review followed by an assessment of the current state of development of different types of biosensors. The research and development in biosensors for biological warfare agent detection is of great interest for the public as well as for governments.
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Affiliation(s)
- Harish Kumar
- Department of Chemistry, Ch. Devi Lal University, Sirsa, Haryana 125 055, India.
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