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Fessner ND, Srdič M, Weber H, Schmid C, Schönauer D, Schwaneberg U, Glieder A. Preparative‐Scale Production of Testosterone Metabolites by Human Liver Cytochrome P450 Enzyme 3A4. Adv Synth Catal 2020. [DOI: 10.1002/adsc.202000251] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Affiliation(s)
- Nico D. Fessner
- Institute of Molecular BiotechnologyGraz University of Technology, NAWI Graz Petersgasse 14/3 Austria
| | - Matic Srdič
- SeSaM-Biotech GmbH Aachen Germany
- Bisy GmbH Hofstaetten Austria
| | - Hansjörg Weber
- Institute of Organic ChemistryGraz University of Technology, NAWI Graz Austria
| | - Christian Schmid
- Institute of Molecular BiotechnologyGraz University of Technology, NAWI Graz Petersgasse 14/3 Austria
- Austrian Centre of Industrial Biotechnology (ACIB) Graz Austria
| | | | | | - Anton Glieder
- Institute of Molecular BiotechnologyGraz University of Technology, NAWI Graz Petersgasse 14/3 Austria
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Karaoğlan M, Erden-Karaoğlan F, Yılmaz S, İnan M. Identification of major ADH genes in ethanol metabolism of Pichia pastoris. Yeast 2019; 37:227-236. [PMID: 31603243 DOI: 10.1002/yea.3443] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2019] [Revised: 09/13/2019] [Accepted: 09/16/2019] [Indexed: 12/15/2022] Open
Abstract
The methylotrophic yeast Pichia pastoris (syn. Komagataella phaffii) is a successful host widely used in recombinant protein production. The widespread use of a methanol-regulated alcohol oxidase 1 (AOX1) promoter for recombinant protein production has directed studies particularly about methanol metabolism in this yeast. Although there is comprehensive knowledge about methanol metabolism, there are other mechanisms in P. pastoris that have not been investigated yet, such as ethanol metabolism. The gene responsible for the consumption of ethanol ADH2 (XM_002491337, known as ADH3) was identified and characterized in our previous study. In this study, the ADH genes (XM_002489969, XM_002491163, XM_002493969) in P. pastoris genome were investigated to determine their roles in ethanol production by gene disruption analysis. We report that the ADH900 (XM_002491163) is the main gene responsible for ethanol production in P. pastoris. The ADH2 gene, previously identified as the only gene responsible for ethanol consumption, also plays a minor role in ethanol production in the absence of the ADH900 gene. The investigation of the carbon source regulation mechanism has also revealed that the ADH2 gene exhibit similar expression behaviours with ADH900 on glucose, glycerol, and methanol, however, it is strongly induced by ethanol.
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Affiliation(s)
- Mert Karaoğlan
- Department of Food Engineering, Akdeniz University, Antalya, Turkey.,Department of Food Engineering, Erzincan Binali Yıldırım University, Erzincan, Turkey
| | | | - Semiramis Yılmaz
- Department of Food Engineering, Akdeniz University, Antalya, Turkey.,Protein Engineering Laboratory, İzmir Biomedicine and Genome Center, İzmir, Turkey
| | - Mehmet İnan
- Department of Food Engineering, Akdeniz University, Antalya, Turkey.,Protein Engineering Laboratory, İzmir Biomedicine and Genome Center, İzmir, Turkey
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Yang B, Wang Q, Ye J, Xu H, Liu Y, Li F, Song X, Liu J, Wang Z, Sand W. Performance and microbial protein expression during anaerobic treatment of alkali-decrement wastewater using a strengthened circulation anaerobic reactor. BIORESOURCE TECHNOLOGY 2019; 273:40-48. [PMID: 30399609 DOI: 10.1016/j.biortech.2018.10.055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2018] [Revised: 10/21/2018] [Accepted: 10/22/2018] [Indexed: 06/08/2023]
Abstract
Herein, a strengthened circulation anaerobic (SCA) reactor was employed for the treatment of actual alkali-decrement wastewater. The degradation mechanism of polyester oligomers and the relationship between the treatment performance and microbial community structure were systematically investigated using various advanced techniques. Results suggest that the accumulation of volatile fatty acids has an inhibitory effect on methanogenic activity. Molecular weight distributions suggest that only incomplete degradation of oligomers was achieved, due to acetogenic inhibition in the lower part of the SCA reactor. Meta-proteomic approach analysis revealed that the methanogens containing heterodisulfide reductase were the primary species involved in methane metabolism. Based on these findings, a possible degradation mechanism for alkali-decrement wastewater in the SCA reactor is proposed. This high-performance anaerobic reactor could be further scaled-up and optimized to serve as a promising and effective unit for the treatment of other refractory industrial wastewaters.
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Affiliation(s)
- Bo Yang
- Textile Pollution Controlling Engineering Center of Ministry of Environmental Protection, College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China; Shanghai Institute of Pollution Control and Ecological Security, Shanghai 200092, China
| | - Qing Wang
- Textile Pollution Controlling Engineering Center of Ministry of Environmental Protection, College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China
| | - Jinshao Ye
- School of Environment, Jinan University, Guangzhou 510632, China
| | - Hui Xu
- Textile Pollution Controlling Engineering Center of Ministry of Environmental Protection, College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China
| | - Yanbiao Liu
- Textile Pollution Controlling Engineering Center of Ministry of Environmental Protection, College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China; Shanghai Institute of Pollution Control and Ecological Security, Shanghai 200092, China.
| | - Fang Li
- Textile Pollution Controlling Engineering Center of Ministry of Environmental Protection, College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China; Shanghai Institute of Pollution Control and Ecological Security, Shanghai 200092, China
| | - Xinshan Song
- Textile Pollution Controlling Engineering Center of Ministry of Environmental Protection, College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China; Shanghai Institute of Pollution Control and Ecological Security, Shanghai 200092, China
| | - Jianshe Liu
- Textile Pollution Controlling Engineering Center of Ministry of Environmental Protection, College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China; Shanghai Institute of Pollution Control and Ecological Security, Shanghai 200092, China
| | - Zhiwei Wang
- Shanghai Institute of Pollution Control and Ecological Security, Shanghai 200092, China; State Key Laboratory of Pollution Control and Resource Reuse, School of Environmental Science and Engineering, Tongji University, Shanghai 200092, China
| | - Wolfgang Sand
- Textile Pollution Controlling Engineering Center of Ministry of Environmental Protection, College of Environmental Science and Engineering, Donghua University, Shanghai 201620, China; Institute of Biosciences, Freiberg University of Mining and Technology, Freiberg 09599, Germany
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