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Mühling L, Baur T, Molitor B. Methanothermobacter thermautotrophicus and Alternative Methanogens: Archaea-Based Production. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2024. [PMID: 39363002 DOI: 10.1007/10_2024_270] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/05/2024]
Abstract
Methanogenic archaea convert bacterial fermentation intermediates from the decomposition of organic material into methane. This process has relevance in the global carbon cycle and finds application in anthropogenic processes, such as wastewater treatment and anaerobic digestion. Furthermore, methanogenic archaea that utilize hydrogen and carbon dioxide as substrates are being employed as biocatalysts for the biomethanation step of power-to-gas technology. This technology converts hydrogen from water electrolysis and carbon dioxide into renewable natural gas (i.e., methane). The application of methanogenic archaea in bioproduction beyond methane has been demonstrated in only a few instances and is limited to mesophilic species for which genetic engineering tools are available. In this chapter, we discuss recent developments for those existing genetically tractable systems and the inclusion of novel genetic tools for thermophilic methanogenic species. We then give an overview of recombinant bioproduction with mesophilic methanogenic archaea and thermophilic non-methanogenic microbes. This is the basis for discussing putative products with thermophilic methanogenic archaea, specifically the species Methanothermobacter thermautotrophicus. We give estimates of potential conversion efficiencies for those putative products based on a genome-scale metabolic model for M. thermautotrophicus.
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Affiliation(s)
- Lucas Mühling
- Environmental Biotechnology Group, Department of Geosciences, University of Tübingen, Tübingen, Germany
| | - Tina Baur
- Environmental Biotechnology Group, Department of Geosciences, University of Tübingen, Tübingen, Germany
- Cluster of Excellence - Controlling Microbes to Fight Infections, University of Tübingen, Tübingen, Germany
| | - Bastian Molitor
- Environmental Biotechnology Group, Department of Geosciences, University of Tübingen, Tübingen, Germany.
- Cluster of Excellence - Controlling Microbes to Fight Infections, University of Tübingen, Tübingen, Germany.
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2
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de Souza F, Gupta RK. Bacteria for Bioplastics: Progress, Applications, and Challenges. ACS OMEGA 2024; 9:8666-8686. [PMID: 38434856 PMCID: PMC10905720 DOI: 10.1021/acsomega.3c07372] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/07/2023] [Revised: 01/17/2024] [Accepted: 01/24/2024] [Indexed: 03/05/2024]
Abstract
Bioplastics are one of the answers that can point society toward a sustainable future. Under this premise, the synthesis of polymers with competitive properties using low-cost starting materials is a highly desired factor in the industry. Also, tackling environmental issues such as nonbiodegradable waste generation, high carbon footprint, and consumption of nonrenewable resources are some of the current concerns worldwide. The scientific community has been placing efforts into the biosynthesis of polymers using bacteria and other microbes. These microorganisms can be convenient reactors to consume food and agricultural wastes and convert them into biopolymers with inherently attractive properties such as biodegradability, biocompatibility, and appreciable mechanical and chemical properties. Such biopolymers can be applied to several fields such as packing, cosmetics, pharmaceutical, medical, biomedical, and agricultural. Thus, intending to elucidate the science of microbes to produce polymers, this review starts with a brief introduction to bioplastics by describing their importance and the methods for their production. The second section dives into the importance of bacteria regarding the biochemical routes for the synthesis of polymers along with their advantages and disadvantages. The third section covers some of the main parameters that influence biopolymers' production. Some of the main applications of biopolymers along with a comparison between the polymers obtained from microorganisms and the petrochemical-based ones are presented. Finally, some discussion about the future aspects and main challenges in this field is provided to elucidate the main issues that should be tackled for the wide application of microorganisms for the preparation of bioplastics.
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Affiliation(s)
- Felipe
Martins de Souza
- National
Institute for Materials Advancement, Pittsburgh
State University, 1204 Research Road, Pittsburgh, Kansas 66762, United States
| | - Ram K. Gupta
- National
Institute for Materials Advancement, Pittsburgh
State University, 1204 Research Road, Pittsburgh, Kansas 66762, United States
- Department
of Chemistry, Pittsburgh State University, 1701 South Broadway Street, Pittsburgh, Kansas 66762, United States
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3
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Anjana, Rawat S, Goswami S. Synergistic approach for enhanced production of polyhydroxybutyrate by Bacillus pseudomycoides SAS-B1: Effective utilization of glycerol and acrylic acid through fed-batch fermentation and its environmental impact assessment. Int J Biol Macromol 2024; 258:128764. [PMID: 38103666 DOI: 10.1016/j.ijbiomac.2023.128764] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2023] [Revised: 12/07/2023] [Accepted: 12/11/2023] [Indexed: 12/19/2023]
Abstract
The continual rise in the consumption of petroleum-based synthetic polymers raised a significant environmental concern. Bacillus pseudomycoides SAS-B1 is a gram-positive rod-shaped halophilic bacterium capable of accumulating Polyhydroxybutyrate (PHB)-an intracellular biodegradable polymer. In the present study, the optimal conditions for cell cultivation in the seed media were developed. The optimal factors included a preservation age of 14 to 21 days (with 105 to 106 cells/mL), inoculum size of 0.1 % (w/v), 1 % (w/v) glucose, and growth temperature of 30 °C. The cells were then cultivated in a two-stage fermentation process utilizing glycerol and Corn Steep Liquor (CSL) as carbon and nitrogen sources, respectively. PHB yield was effectively increased from 2.01 to 9.21 g/L through intermittent feeding of glycerol and CSL, along with acrylic acid. FTIR, TGA, DSC, and XRD characterization studies were employed to enumerate the recovered PHB and determine its physicochemical properties. Additionally, the study assessed the cradle-to-gate Life Cycle Assessment (LCA) of PHB production, considering net CO2 generation and covering all major environmental impact categories. The production of 1000 kg of PHB resulted in lower stratospheric ozone depletion and comparatively reduced carbon dioxide emissions (2022.7 kg CO2 eq.) and terrestrial ecotoxicity (9.54 kg 1,4-DCB eq.) than typical petrochemical polymers.
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Affiliation(s)
- Anjana
- Division of Chemical Engineering, Centre of Innovative and Applied Bioprocessing, Knowledge City, Sector-81, Mohali, Punjab 140306, India; Department of Biotechnology, Regional Center for Biotechnology (RCB), Faridabad, Haryana 121001, India
| | - Shristhi Rawat
- Division of Chemical Engineering, Centre of Innovative and Applied Bioprocessing, Knowledge City, Sector-81, Mohali, Punjab 140306, India
| | - Saswata Goswami
- Division of Chemical Engineering, Centre of Innovative and Applied Bioprocessing, Knowledge City, Sector-81, Mohali, Punjab 140306, India; Department of Biotechnology, Regional Center for Biotechnology (RCB), Faridabad, Haryana 121001, India.
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de Mello AFM, Vandenberghe LPDS, Machado CMB, Valladares-Diestra KK, de Carvalho JC, Soccol CR. Polyhydroxybutyrate production by Cupriavidus necator in a corn biorefinery concept. BIORESOURCE TECHNOLOGY 2023; 370:128537. [PMID: 36581233 DOI: 10.1016/j.biortech.2022.128537] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2022] [Revised: 12/23/2022] [Accepted: 12/24/2022] [Indexed: 06/17/2023]
Abstract
The high costs of bioplastics' production may hinder their commercialization. Development of new processes with high yields and in biorefineries can enhance diffusion of these materials. This work evaluated the production of polyhydroxybutyrate (PHB) from the combination of milled corn starchy fraction hydrolysate and crude glycerol as substrates by the strain Cupriavidus necator LPB 1421. After optimization steps, maximum accumulation of 62 % of PHB was obtained, which represents 11.64 g.L-1 and productivity of 0.162 g.Lh-1. In a stirred tank bioreactor system with 8 L of operational volume, 70 % of PHB accumulation was reported, representing 14.17 g.L-1 of the biopolymer with 0.197 g.Lh-1 productivity. PHB recovery was conducted using a chemical digestion method, reaching >99 % purity. Therefore, the potential application of milled corn as substrate for PHB production was confirmed. The developed bioplastic process could be coupled to a bioethanol producing unit creating the opportunity of a sustainable and economic biorefinery.
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Affiliation(s)
- Ariane Fátima Murawski de Mello
- Federal University of Paraná, Department of Bioprocess Engineering and Biotechnology, Centro Politécnico, 81531-980 Curitiba, Paraná, Brazil
| | - Luciana Porto de Souza Vandenberghe
- Federal University of Paraná, Department of Bioprocess Engineering and Biotechnology, Centro Politécnico, 81531-980 Curitiba, Paraná, Brazil.
| | - Clara Matte Borges Machado
- Federal University of Paraná, Department of Bioprocess Engineering and Biotechnology, Centro Politécnico, 81531-980 Curitiba, Paraná, Brazil
| | - Kim Kley Valladares-Diestra
- Federal University of Paraná, Department of Bioprocess Engineering and Biotechnology, Centro Politécnico, 81531-980 Curitiba, Paraná, Brazil
| | - Júlio César de Carvalho
- Federal University of Paraná, Department of Bioprocess Engineering and Biotechnology, Centro Politécnico, 81531-980 Curitiba, Paraná, Brazil
| | - Carlos Ricardo Soccol
- Federal University of Paraná, Department of Bioprocess Engineering and Biotechnology, Centro Politécnico, 81531-980 Curitiba, Paraná, Brazil
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Lascu I, Tănase AM, Jablonski P, Chiciudean I, Preda MI, Avramescu S, Irgum K, Stoica I. Revealing the Phenotypic and Genomic Background for PHA Production from Rapeseed-Biodiesel Crude Glycerol Using Photobacterium ganghwense C2.2. Int J Mol Sci 2022; 23:13754. [PMID: 36430242 PMCID: PMC9697146 DOI: 10.3390/ijms232213754] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2022] [Revised: 10/27/2022] [Accepted: 11/03/2022] [Indexed: 11/12/2022] Open
Abstract
Polyhydroxyalkanoates (PHA) are promising biodegradable and biocompatible bioplastics, and extensive knowledge of the employed bacterial strain's metabolic capabilities is necessary in choosing economically feasible production conditions. This study aimed to create an in-depth view of the utilization of Photobacterium ganghwense C2.2 for PHA production by linking a wide array of characterization methods: metabolic pathway annotation from the strain's complete genome, high-throughput phenotypic tests, and biomass analyses through plate-based assays and flask and bioreactor cultivations. We confirmed, in PHA production conditions, urea catabolization, fatty acid degradation and synthesis, and high pH variation and osmotic stress tolerance. With urea as a nitrogen source, pure and rapeseed-biodiesel crude glycerol were analyzed comparatively as carbon sources for fermentation at 20 °C. Flask cultivations yielded 2.2 g/L and 2 g/L PHA at 120 h, respectively, with molecular weights of 428,629 g/mol and 81,515 g/mol. Bioreactor batch cultivation doubled biomass accumulation (10 g/L and 13.2 g/L) in 48 h, with a PHA productivity of 0.133 g/(L·h) and 0.05 g/(L·h). Thus, phenotypic and genomic analyses determined the successful use of Photobacterium ganghwense C2.2 for PHA production using urea and crude glycerol and 20 g/L NaCl, without pH adjustment, providing the basis for a viable fermentation process.
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Affiliation(s)
- Irina Lascu
- Department of Genetics, Faculty of Biology, University of Bucharest, 050095 Bucharest, Romania
| | - Ana Maria Tănase
- Department of Genetics, Faculty of Biology, University of Bucharest, 050095 Bucharest, Romania
| | - Piotr Jablonski
- Department of Chemistry, Faculty of Science and Technology, Umeå University, S-90187 Umeå, Sweden
| | - Iulia Chiciudean
- Department of Genetics, Faculty of Biology, University of Bucharest, 050095 Bucharest, Romania
| | - Maria Irina Preda
- Department of Genetics, Faculty of Biology, University of Bucharest, 050095 Bucharest, Romania
| | - Sorin Avramescu
- Department of Organic Chemistry, Biochemistry and Catalysis, Faculty of Chemistry, University of Bucharest, 030018 Bucharest, Romania
| | - Knut Irgum
- Department of Chemistry, Faculty of Science and Technology, Umeå University, S-90187 Umeå, Sweden
| | - Ileana Stoica
- Department of Genetics, Faculty of Biology, University of Bucharest, 050095 Bucharest, Romania
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Production of Polyhydroxyalkanoates through Soybean Hull and Waste Glycerol Valorization: Subsequent Alkaline Pretreatment and Enzymatic Hydrolysis. FERMENTATION-BASEL 2022. [DOI: 10.3390/fermentation8090433] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Alkaline pretreatment and sequential enzymatic hydrolysis of soybean hull were investigated to obtain fermentable sugars for polyhydroxyalkanoates production along with residual glycerol as low-cost carbon sources. Soybean hull is composed of approximately 32% cellulose, 12% hemicellulose, 6% lignin, and 11% protein. Alkaline pretreatment was carried out with 2% NaOH concentration, 10% (w/v) biomass loading, and 60 min incubation time in an autoclave at 120 °C. The response surface methodology (RSM) based on the central composite design (CCD) tool was employed to optimize the enzymatic hydrolysis process, where the variables of biomass loading, enzymes’ concentration, and time were considered. The maximum total reducing sugars concentration obtained was 115.9 g∙L−1 with an enzyme concentration of 11.5 mg protein/g dry substrate for enzyme preparation B1, 2.88 mg protein/g dry substrate for XylA, and 57.6 U/g dry substrate for β-glucosidase, after 42 h at 45 °C, and pH was 4.5. Subsequently, the saccharification step was conducted by increasing the processing scale, using a 1 L tank with stirring with a controlled temperature. Implementing the same enzyme concentrations at pH 4.5, temperature of 45 °C, 260 mL working volume, and incubation time of 42 h, under fed-batch operation with substrate feeding after 14 h and 22 h, a hydrolysate with a concentration of 185.7 g∙L−1 was obtained. Initially, to verify the influence of different carbon sources on Cupriavidus necator DSMz 545 in biomass production, batch fermentations were developed, testing laboratory-grade glucose, soybean hull hydrolysate, and waste glycerol (a by-product of biodiesel processing available in large quantities) as carbon sources in one-factor-at-a-time assays, and the mixture of soybean hull hydrolysate and waste glycerol. Then, the hydrolysate and waste glycerol were consumed by C. necator, producing 12.1 g∙L−1 of biomass and achieving 39% of polyhydroxyalkanoate (PHB) accumulation. To the best of our knowledge, this is the first time that soybean hull hydrolysate has been used as a carbon source to produce polyhydroxyalkanoates, and the results suggest that this agro-industrial by-product is a viable alternative feedstock to produce value-added components.
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Koller M, Obruča S. Biotechnological production of polyhydroxyalkanoates from glycerol: A review. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2022. [DOI: 10.1016/j.bcab.2022.102333] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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Zhila NO, Sapozhnikova KY, Kiselev EG, Vasiliev AD, Nemtsev IV, Shishatskaya EI, Volova TG. Properties of Degradable Polyhydroxyalkanoates (PHAs) Synthesized by a New Strain, Cupriavidus necator IBP/SFU-1, from Various Carbon Sources. Polymers (Basel) 2021; 13:polym13183142. [PMID: 34578042 PMCID: PMC8468435 DOI: 10.3390/polym13183142] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2021] [Revised: 09/13/2021] [Accepted: 09/14/2021] [Indexed: 12/15/2022] Open
Abstract
The bacterial strain isolated from soil was identified as Cupriavidus necator IBP/SFU-1 and investigated as a PHA producer. The strain was found to be able to grow and synthesize PHAs under autotrophic conditions and showed a broad organotrophic potential towards different carbon sources: sugars, glycerol, fatty acids, and plant oils. The highest cell concentrations (7–8 g/L) and PHA contents were produced from oleic acid (78%), fructose, glucose, and palm oil (over 80%). The type of the carbon source influenced the PHA chemical composition and properties: when grown on oleic acid, the strain synthesized the P(3HB-co-3HV) copolymer; on plant oils, the P(3HB-co-3HV-co-3HHx) terpolymer, and on the other substrates, the P(3HB) homopolymer. The type of the carbon source influenced molecular-weight properties of PHAs: P(3HB) synthesized under autotrophic growth conditions, from CO2, had the highest number-average (290 ± 15 kDa) and weight-average (850 ± 25 kDa) molecular weights and the lowest polydispersity (2.9 ± 0.2); polymers synthesized from organic carbon sources showed increased polydispersity and reduced molecular weight. The carbon source was not found to affect the degree of crystallinity and thermal properties of the PHAs. The type of the carbon source determined not only PHA composition and molecular weight but also surface microstructure and porosity of the polymer films. The new strain can be recommended as a promising P(3HB) producer from palm oil, oleic acid, and sugars (fructose and glucose) and as a producer of P(3HB-co-3HV) from oleic acid and P(3HB-co-3HV-co-3HHx) from palm oil.
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Affiliation(s)
- Natalia O. Zhila
- Basic Department of Biotechnology, School of Fundamental Biology and Biotechnology, Siberian Federal University, 79 Svobodnyi Av., 660041 Krasnoyarsk, Russia; (K.Y.S.); (E.G.K.); (A.D.V.); (I.V.N.); (E.I.S.); (T.G.V.)
- Federal Research Center “Krasnoyarsk Science Center SB RAS”, Institute of Biophysics SB RAS, 50/50 Akademgorodok, 660036 Krasnoyarsk, Russia
- Correspondence: ; Tel.: +7-391-290-54-91; Fax: +7-391-243-34-00
| | - Kristina Yu. Sapozhnikova
- Basic Department of Biotechnology, School of Fundamental Biology and Biotechnology, Siberian Federal University, 79 Svobodnyi Av., 660041 Krasnoyarsk, Russia; (K.Y.S.); (E.G.K.); (A.D.V.); (I.V.N.); (E.I.S.); (T.G.V.)
- Federal Research Center “Krasnoyarsk Science Center SB RAS”, Institute of Biophysics SB RAS, 50/50 Akademgorodok, 660036 Krasnoyarsk, Russia
| | - Evgeniy G. Kiselev
- Basic Department of Biotechnology, School of Fundamental Biology and Biotechnology, Siberian Federal University, 79 Svobodnyi Av., 660041 Krasnoyarsk, Russia; (K.Y.S.); (E.G.K.); (A.D.V.); (I.V.N.); (E.I.S.); (T.G.V.)
- Federal Research Center “Krasnoyarsk Science Center SB RAS”, Institute of Biophysics SB RAS, 50/50 Akademgorodok, 660036 Krasnoyarsk, Russia
| | - Alexander D. Vasiliev
- Basic Department of Biotechnology, School of Fundamental Biology and Biotechnology, Siberian Federal University, 79 Svobodnyi Av., 660041 Krasnoyarsk, Russia; (K.Y.S.); (E.G.K.); (A.D.V.); (I.V.N.); (E.I.S.); (T.G.V.)
- Federal Research Center “Krasnoyarsk Science Center SB RAS”, L.V. Kirensky Institute of Physics SB RAS, 50/38 Akademgorodok, 660036 Krasnoyarsk, Russia
| | - Ivan V. Nemtsev
- Basic Department of Biotechnology, School of Fundamental Biology and Biotechnology, Siberian Federal University, 79 Svobodnyi Av., 660041 Krasnoyarsk, Russia; (K.Y.S.); (E.G.K.); (A.D.V.); (I.V.N.); (E.I.S.); (T.G.V.)
- Federal Research Center “Krasnoyarsk Science Center SB RAS”, L.V. Kirensky Institute of Physics SB RAS, 50/38 Akademgorodok, 660036 Krasnoyarsk, Russia
- Federal Research Center “Krasnoyarsk Science Center of the Siberian Branch of the Russian Academy of Sciences”, 50 Akademgorodok, 660036 Krasnoyarsk, Russia
| | - Ekaterina I. Shishatskaya
- Basic Department of Biotechnology, School of Fundamental Biology and Biotechnology, Siberian Federal University, 79 Svobodnyi Av., 660041 Krasnoyarsk, Russia; (K.Y.S.); (E.G.K.); (A.D.V.); (I.V.N.); (E.I.S.); (T.G.V.)
- Federal Research Center “Krasnoyarsk Science Center SB RAS”, Institute of Biophysics SB RAS, 50/50 Akademgorodok, 660036 Krasnoyarsk, Russia
| | - Tatiana G. Volova
- Basic Department of Biotechnology, School of Fundamental Biology and Biotechnology, Siberian Federal University, 79 Svobodnyi Av., 660041 Krasnoyarsk, Russia; (K.Y.S.); (E.G.K.); (A.D.V.); (I.V.N.); (E.I.S.); (T.G.V.)
- Federal Research Center “Krasnoyarsk Science Center SB RAS”, Institute of Biophysics SB RAS, 50/50 Akademgorodok, 660036 Krasnoyarsk, Russia
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Bedade DK, Edson CB, Gross RA. Emergent Approaches to Efficient and Sustainable Polyhydroxyalkanoate Production. Molecules 2021; 26:3463. [PMID: 34200447 PMCID: PMC8201374 DOI: 10.3390/molecules26113463] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2021] [Revised: 05/25/2021] [Accepted: 05/27/2021] [Indexed: 11/16/2022] Open
Abstract
Petroleum-derived plastics dominate currently used plastic materials. These plastics are derived from finite fossil carbon sources and were not designed for recycling or biodegradation. With the ever-increasing quantities of plastic wastes entering landfills and polluting our environment, there is an urgent need for fundamental change. One component to that change is developing cost-effective plastics derived from readily renewable resources that offer chemical or biological recycling and can be designed to have properties that not only allow the replacement of current plastics but also offer new application opportunities. Polyhydroxyalkanoates (PHAs) remain a promising candidate for commodity bioplastic production, despite the many decades of efforts by academicians and industrial scientists that have not yet achieved that goal. This article focuses on defining obstacles and solutions to overcome cost-performance metrics that are not sufficiently competitive with current commodity thermoplastics. To that end, this review describes various process innovations that build on fed-batch and semi-continuous modes of operation as well as methods that lead to high cell density cultivations. Also, we discuss work to move from costly to lower cost substrates such as lignocellulose-derived hydrolysates, metabolic engineering of organisms that provide higher substrate conversion rates, the potential of halophiles to provide low-cost platforms in non-sterile environments for PHA formation, and work that uses mixed culture strategies to overcome obstacles of using waste substrates. We also describe historical problems and potential solutions to downstream processing for PHA isolation that, along with feedstock costs, have been an Achilles heel towards the realization of cost-efficient processes. Finally, future directions for efficient PHA production and relevant structural variations are discussed.
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Affiliation(s)
- Dattatray K. Bedade
- Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180, USA;
| | - Cody B. Edson
- New York State Center for Polymer Synthesis, Department of Chemistry and Chemical Biology, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180, USA;
| | - Richard A. Gross
- Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180, USA;
- New York State Center for Polymer Synthesis, Department of Chemistry and Chemical Biology, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY 12180, USA;
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10
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Lascu I, Mereuță I, Chiciudean I, Hansen H, Avramescu SM, Tănase A, Stoica I. Complete genome sequence of Photobacterium ganghwense C2.2: A new polyhydroxyalkanoate production candidate. Microbiologyopen 2021; 10:e1182. [PMID: 33970538 PMCID: PMC8087987 DOI: 10.1002/mbo3.1182] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2021] [Revised: 03/12/2021] [Accepted: 03/15/2021] [Indexed: 12/30/2022] Open
Abstract
Polyhydroxyalkanoates (PHAs) are biodegradable bioplastics that can be manufactured sustainably and represent a promising green alternative to petrochemical-based plastics. Here, we describe the complete genome of a new marine PHA-producing bacterium-Photobacterium ganghwense (strain C2.2), which we have isolated from the Black Sea seashore. This new isolate is psychrotolerant and accumulates PHA when glycerol is provided as the main carbon source. Transmission electron microscopy, specific staining with Nile Red visualized via epifluorescence microscopy and gas chromatography analysis confirmed the accumulation of PHA. This is the only PHA-producing Photobacterium for which we now have a complete genome sequence, allowing us to investigate the pathways for PHA production and other secondary metabolite synthesis pathways. The de novo assembly genome, obtained using open-source tools, comprises two chromosomes (3.5, 2 Mbp) and a megaplasmid (202 kbp). We identify the entire PHA synthesis gene cluster that encodes a class I PHA synthase, a phasin, a 3-ketothiolase, and an acetoacetyl-CoA reductase. No conventional PHA depolymerase was identified in strain C2.2, but a putative lipase with extracellular amorphous PHA depolymerase activity was annotated, suggesting that C2.2 is unable to degrade intracellular PHA. A complete pathway for the conversion of glycerol to acetyl-CoA was annotated, in accordance with its ability to convert glycerol to PHA. Several secondary metabolite biosynthetic gene clusters and a low number of genes involved in antibiotic resistance and virulence were also identified, indicating the strain's suitability for biotechnological applications.
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Affiliation(s)
- Irina Lascu
- Department of GeneticsFaculty of BiologyUniversity of BucharestBucharestRomania
| | - Ioana Mereuță
- Department of GeneticsFaculty of BiologyUniversity of BucharestBucharestRomania
| | - Iulia Chiciudean
- Department of GeneticsFaculty of BiologyUniversity of BucharestBucharestRomania
| | - Hilde Hansen
- Department of ChemistryFaculty of Science and TechnologyUiT The Arctic University of NorwayTromsøNorway
| | - Sorin Marius Avramescu
- Department of Organic Chemistry, Biochemistry and CatalysisFaculty of ChemistryUniversity of BucharestBucharestRomania
| | - Ana‐Maria Tănase
- Department of GeneticsFaculty of BiologyUniversity of BucharestBucharestRomania
| | - Ileana Stoica
- Department of GeneticsFaculty of BiologyUniversity of BucharestBucharestRomania
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11
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Riaz S, Rhee KY, Park SJ. Polyhydroxyalkanoates (PHAs): Biopolymers for Biofuel and Biorefineries. Polymers (Basel) 2021; 13:253. [PMID: 33451137 PMCID: PMC7828617 DOI: 10.3390/polym13020253] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2020] [Revised: 12/29/2020] [Accepted: 12/31/2020] [Indexed: 12/20/2022] Open
Abstract
Fossil fuels are energy recourses that fulfill most of the world's energy requirements. However, their production and use cause severe health and environmental problems including global warming and pollution. Consequently, plant and animal-based fuels (also termed as biofuels), such as biogas, biodiesel, and many others, have been introduced as alternatives to fossil fuels. Despite the advantages of biofuels, such as being renewable, environmentally friendly, easy to source, and reducing the dependency on foreign oil, there are several drawbacks of using biofuels including high cost, and other factors discussed in the fuel vs. food debate. Therefore, it is imperative to produce novel biofuels while also developing suitable manufacturing processes that ease the aforementioned problems. Polyhydroxyalkanoates (PHAs) are structurally diverse microbial polyesters synthesized by numerous bacteria. Moreover, this structural diversity allows PHAs to readily undergo methyl esterification and to be used as biofuels, which further extends the application value of PHAs. PHA-based biofuels are similar to biodiesel except for having a high oxygen content and no nitrogen or sulfur. In this article, we review the microbial production of PHAs, biofuel production from PHAs, parameters affecting the production of fuel from PHAs, and PHAs biorefineries. In addition, future work on the production of biofuels from PHAs is also discussed.
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Affiliation(s)
- Shahina Riaz
- Department of Chemistry, Inha University, Incheon 22212, Korea;
| | - Kyong Yop Rhee
- Department of Mechanical Engineering (BK PLUS), College of Engineering, Kyung Hee University, Yongin 17104, Korea
| | - Soo Jin Park
- Department of Chemistry, Inha University, Incheon 22212, Korea;
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12
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Izaguirre JK, da Fonseca MMR, Castañón S, Villarán MC, Cesário MT. Giving credit to residual bioresources: From municipal solid waste hydrolysate and waste plum juice to poly (3-hydroxybutyrate). WASTE MANAGEMENT (NEW YORK, N.Y.) 2020; 118:534-540. [PMID: 32980732 DOI: 10.1016/j.wasman.2020.09.014] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2020] [Revised: 09/09/2020] [Accepted: 09/10/2020] [Indexed: 06/11/2023]
Abstract
Municipal solid waste (MSW) is massively generated all over the world. Its organic fraction (OFMSW), which represents a high percentage of MSW, mainly contains biodegradable materials, namely food waste, paper and garden waste. The social cost of OFMSW treatment and/or disposal is a serious and widespread problem, particularly in highly populated areas. Thus, effective and innovative solutions, which include the upgrading of OFMSW, are being currently sought. In fact, the OFMSW abundance, availability and average composition suggest its considerable potential within the circular economy desideratum, paving the way to valorisation approaches. In this context, an OFMSW sugar-rich hydrolysate and its validation as a substrate for the production of the polyester poly(3-hydroxybutyrate) (P(3HB)), to date the only bioplastic easily biodegradable in marine environment, were successfully obtained in a previous study. Based on those results, this work addresses the upscaling of the fermentative production, in fed-batch mode, of P(3HB) by Burkholderia sacchari. The OFMSW hydrolysate was used as cultivation medium due to its balanced nutrient composition, while a plum waste juice, also rich in sugars, was applied as feed to the bioreactor. By implementing this strategy, a maximum P(3HB) production of 30 g·L-1 with an accumulation of 43% g (P(3HB))/g cell dry weight (CDW) after 51 h, was achieved. The use of the hydrolysate as initial medium resulted in higher CDW (71 g·L-1) than that of the simulated hydrolysate (62 g·L-1 in average), probably because the OFMSW hydrolysate favours biomass growth in detriment of P(3HB) production.
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Affiliation(s)
- Jon Kepa Izaguirre
- Basque Institute for Agricultural Research and Development, NEIKER, 01080 Arkaute, Spain; iBB - Institute for Bioengineering and Biosciences, Instituto Superior Técnico, Av. Rovisco Pais, 1049-001 Lisboa, Portugal.
| | - M Manuela R da Fonseca
- iBB - Institute for Bioengineering and Biosciences, Instituto Superior Técnico, Av. Rovisco Pais, 1049-001 Lisboa, Portugal
| | - Sonia Castañón
- Basque Institute for Agricultural Research and Development, NEIKER, 01080 Arkaute, Spain
| | - M Carmen Villarán
- TECNALIA, Technological Park of Alava, Leonardo Da Vinci 11, 01510 Miñano, Alava, Spain
| | - M Teresa Cesário
- iBB - Institute for Bioengineering and Biosciences, Instituto Superior Técnico, Av. Rovisco Pais, 1049-001 Lisboa, Portugal
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13
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Louvado A, Coelho FJRC, Palma M, Tavares LC, Ozorio ROA, Magnoni L, Viegas I, Gomes NCM. Effect of glycerol feed-supplementation on seabass metabolism and gut microbiota. Appl Microbiol Biotechnol 2020; 104:8439-8453. [PMID: 32845369 DOI: 10.1007/s00253-020-10809-3] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2020] [Revised: 07/20/2020] [Accepted: 08/02/2020] [Indexed: 12/22/2022]
Abstract
Dietary glycerol supplementation in aquaculture feed is seen as an alternative and inexpensive way to fuel fish metabolism, attenuate metabolic utilization of dietary proteins and, subsequently, reduce nitrogen excretion. In this study, we evaluated the impact of dietary glycerol supplementation on nitrogen excretion of European seabass (Dicentrarchus labrax) and its effects on metabolite profile and bacterial community composition of gut digesta. These effects were evaluated in a 60-day trial with fish fed diets supplemented with 2.5% or 5% (w/w) refined glycerol and without glycerol supplementation. Nuclear magnetic resonance spectroscopy and high-throughput 16S rRNA gene sequencing were used to characterize the effects of glycerol supplementation on digesta metabolite and bacterial community composition of 6-h postprandial fish. Our results showed that ammonia excretion was not altered by dietary glycerol supplementation, and the highest glycerol dosage was associated with significant increases in amino acids and a decrease of ergogenic creatine in digesta metabolome. Concomitantly, significant decreases in putative amino acid degradation pathways were detected in the predicted metagenome analysis, suggesting a metabolic shift. Taxon-specific analysis revealed significant increases in abundance of some specific genera (e.g., Burkholderia and Vibrio) and bacterial diversity. Overall, our results indicate glycerol supplementation may decrease amino acid catabolism without adversely affecting fish gut bacterial communities.Key points• Glycerol can be an inexpensive and energetic alternative in fish feed formulations.• Glycerol did not affect nitrogen excretion and gut bacteriome composition.• Glycerol reduced uptake of amino acids and increased uptake of ergogenic creatine.• Glycerol reduced putative amino acid degradation pathways in predicted metagenome.
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Affiliation(s)
- A Louvado
- Department of Biology & CESAM, University of Aveiro, 3810-193, Aveiro, Portugal
| | - F J R C Coelho
- Department of Biology & CESAM, University of Aveiro, 3810-193, Aveiro, Portugal
| | - M Palma
- University of Coimbra, Centre for Functional Ecology, Department of Life Sciences, 3000-456, Coimbra, Portugal
| | - L C Tavares
- Centre for Neuroscience and Cell Biology, University of Coimbra, 3004-517, Coimbra, Portugal
| | - R O A Ozorio
- Interdisciplinary Centre of Marine and Environmental Research (CIIMAR), University of Porto, Matosinhos, Portugal
| | - L Magnoni
- Interdisciplinary Centre of Marine and Environmental Research (CIIMAR), University of Porto, Matosinhos, Portugal
| | - I Viegas
- University of Coimbra, Centre for Functional Ecology, Department of Life Sciences, 3000-456, Coimbra, Portugal.,Centre for Neuroscience and Cell Biology, University of Coimbra, 3004-517, Coimbra, Portugal
| | - N C M Gomes
- Department of Biology & CESAM, University of Aveiro, 3810-193, Aveiro, Portugal.
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14
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Sosa‐Hernández JE, Villalba‐Rodríguez AM, Romero‐Castillo KD, Zavala‐Yoe R, Bilal M, Ramirez‐Mendoza RA, Parra‐Saldivar R, Iqbal HMN. Poly‐3‐hydroxybutyrate‐based constructs with novel characteristics for drug delivery and tissue engineering applications—A review. POLYM ENG SCI 2020. [DOI: 10.1002/pen.25470] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
| | | | - Kenya D. Romero‐Castillo
- Tecnologico de MonterreySchool of Engineering and Sciences, Campus Monterrey Monterrey Nuevo Leon Mexico
| | - Ricardo Zavala‐Yoe
- Instituto Tecnologico de Monterrey, Campus Ciudad de Mexico Mexico City Mexico
| | - Muhammad Bilal
- School of Life Science and Food EngineeringHuaiyin Institute of Technology Huaian China
| | - Ricardo A. Ramirez‐Mendoza
- Tecnologico de MonterreySchool of Engineering and Sciences, Campus Monterrey Monterrey Nuevo Leon Mexico
| | - Roberto Parra‐Saldivar
- Tecnologico de MonterreySchool of Engineering and Sciences, Campus Monterrey Monterrey Nuevo Leon Mexico
| | - Hafiz M. N. Iqbal
- Tecnologico de MonterreySchool of Engineering and Sciences, Campus Monterrey Monterrey Nuevo Leon Mexico
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15
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Van Thuoc D, My DN, Loan TT, Sudesh K. Utilization of waste fish oil and glycerol as carbon sources for polyhydroxyalkanoate production by Salinivibrio sp. M318. Int J Biol Macromol 2019; 141:885-892. [DOI: 10.1016/j.ijbiomac.2019.09.063] [Citation(s) in RCA: 38] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2019] [Revised: 09/08/2019] [Accepted: 09/09/2019] [Indexed: 11/29/2022]
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16
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Leong YK, Show PL, Lan JCW, Krishnamoorthy R, Chu DT, Nagarajan D, Yen HW, Chang JS. Application of thermo-separating aqueous two-phase system in extractive bioconversion of polyhydroxyalkanoates by Cupriavidus necator H16. BIORESOURCE TECHNOLOGY 2019; 287:121474. [PMID: 31122870 DOI: 10.1016/j.biortech.2019.121474] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2019] [Revised: 05/07/2019] [Accepted: 05/10/2019] [Indexed: 06/09/2023]
Abstract
Polyhydroxyalkanoates (PHAs), a family of biodegradable and renewable biopolymers show a huge potential as an alternative to conventional plastics. Extractive bioconversion (in situ product recovery) is a technique that integrates upstream fermentation and downstream purification. In this study, extractive bioconversion of PHAs from Cupriavidus necator H16 was performed via a thermo-separating aqueous two-phase system to reduce the cost and environmental impacts of PHAs production. Key operating parameters, such as polymer concentration, temperature, and pH, were optimized. The strategy achieved a yield and PF of 97.6% and 1.36-fold, respectively at 5% EOPO 3900 concentration, 30 °C fermentation temperature and pH 6. The PHAs production process was also successfully scaled up in a 2 L bioreactor. To the best of our knowledge, this is the first report on extractive fermentation of PHAs from Cupriavidus necator utilizing a thermo-separation system to achieve a better productivity and purity of the target product.
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Affiliation(s)
- Yoong Kit Leong
- Department of Chemical and Materials Engineering, Tunghai University, Taichung, Taiwan
| | - Pau-Loke Show
- Department of Chemical and Environmental Engineering, Faculty of Engineering, University of Nottingham Malaysia Campus, Jalan Broga, Semenyih 43500, Selangor Darul Ehsan, Malaysia
| | - John Chi-Wei Lan
- Biorefinery and Bioprocess Engineering Laboratory, Department of Chemical Engineering and Material Science, Yuan Ze University, No. 135 Yuan-Tung Road, Chungli, Taoyuan 320, Taiwan
| | - Rambabu Krishnamoorthy
- Department of Chemical Engineering, School of Civil and Chemical Engineering, VIT University, Vellore 632014, India; Department of Chemical Engineering, Khalifa University of Science and Technology, The Petroleum Institute, Abu Dhabi, United Arab Emirates
| | - Dinh-Toi Chu
- Centre for Molecular Medicine Norway (NCMM), Nordic EMBL Partnership, University of Oslo and Oslo University Hospital, Norway; Faculty of Biology, Hanoi National University of Education, Hanoi, Viet Nam
| | - Dillirani Nagarajan
- Research Center for Circular Economy, National Cheng Kung University, Tainan 701, Taiwan
| | - Hong-Wei Yen
- Department of Chemical and Materials Engineering, Tunghai University, Taichung, Taiwan
| | - Jo-Shu Chang
- Department of Chemical Engineering, National Cheng Kung University, Tainan, Taiwan; Research Center for Circular Economy, National Cheng Kung University, Tainan 701, Taiwan; College of Engineering, Tunghai University, Taichung 407, Taiwan.
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17
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Li M, Eskridge KM, Wilkins MR. Optimization of polyhydroxybutyrate production by experimental design of combined ternary mixture (glucose, xylose and arabinose) and process variables (sugar concentration, molar C:N ratio). Bioprocess Biosyst Eng 2019; 42:1495-1506. [DOI: 10.1007/s00449-019-02146-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2018] [Accepted: 05/06/2019] [Indexed: 01/28/2023]
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18
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Volova T, Kiselev E, Zhila N, Shishatskaya E. Synthesis of Polyhydroxyalkanoates by Hydrogen-Oxidizing Bacteria in a Pilot Production Process. Biomacromolecules 2019; 20:3261-3270. [DOI: 10.1021/acs.biomac.9b00295] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Tatiana Volova
- Siberian Federal University, 79 Svobodnyi Av., Krasnoyarsk 660041, Russia
- Institute of Biophysics SB RAS, Federal Research Center “Krasnoyarsk
Science Center SB RAS”, 50/50 Akademgorodok, Krasnoyarsk 660036, Russia
| | - Evgeniy Kiselev
- Siberian Federal University, 79 Svobodnyi Av., Krasnoyarsk 660041, Russia
- Institute of Biophysics SB RAS, Federal Research Center “Krasnoyarsk
Science Center SB RAS”, 50/50 Akademgorodok, Krasnoyarsk 660036, Russia
| | - Natalia Zhila
- Siberian Federal University, 79 Svobodnyi Av., Krasnoyarsk 660041, Russia
- Institute of Biophysics SB RAS, Federal Research Center “Krasnoyarsk
Science Center SB RAS”, 50/50 Akademgorodok, Krasnoyarsk 660036, Russia
| | - Ekaterina Shishatskaya
- Siberian Federal University, 79 Svobodnyi Av., Krasnoyarsk 660041, Russia
- Institute of Biophysics SB RAS, Federal Research Center “Krasnoyarsk
Science Center SB RAS”, 50/50 Akademgorodok, Krasnoyarsk 660036, Russia
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19
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Alves MI, Macagnan KL, Piecha CR, Torres MM, Perez IA, Kesserlingh SM, Rodrigues RDS, de Oliveira PD, Moreira ADS. Optimization of Ralstonia solanacearum cell growth using a central composite rotational design for the P(3HB) production: Effect of agitation and aeration. PLoS One 2019; 14:e0211211. [PMID: 30695062 PMCID: PMC6350987 DOI: 10.1371/journal.pone.0211211] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2018] [Accepted: 01/09/2019] [Indexed: 11/20/2022] Open
Abstract
The intracellular accumulation of polyhydroxyalkanoates (PHAs) normally occurs after cell growth, during the second fermentation stage and under nutrient-limited conditions in the presence of a carbon excess. However, some microorganisms are able to accumulate PHAs as poly(3-hydroxybutyrate) [P(3HB)] during the first fermentation stage, the cell growth phase, without nutrient limitation, once they have been reported to utilize type II metabolism during the polymer accumulation phase. This study evaluated the effect of aeration and agitation on cell growth and P(3HB) accumulation in Ralstonia solanacearum RS, performed in a bioreactor for 24h at 32°C. A 22 central composite rotational design (CCRD) was used, with agitation (150 to 250 rpm) and aeration (0.3 to 1 vvm) as independent variables and optical density (OD600nm), dry cell weight (DCW), and P(3HB) yield as dependent variables. A significant polymer accumulation, until 70% of P(3HB), was observed, proving that R. solanacearum RS exhibited metabolism type II, regardless of the aeration process. The best results were obtained for 1 vvm and 250 rpm (+1, +1), with values of OD600nm (18.04) and DCW (4.82 g.L-1).
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Affiliation(s)
- Mariane Igansi Alves
- Department of Food Science and Technology, Eliseu Maciel Faculty of Agronomy, Federal University of Pelotas, Pelotas, Rio Grande do Sul, Brazil
| | - Karine Laste Macagnan
- Technological Development Center, Biotechnology, Federal University of Pelotas, Pelotas, Rio Grande do Sul, Brazil
| | - Camila Rios Piecha
- Technological Development Center, Biotechnology, Federal University of Pelotas, Pelotas, Rio Grande do Sul, Brazil
| | - Matheus Marques Torres
- Technological Development Center, Biotechnology, Federal University of Pelotas, Pelotas, Rio Grande do Sul, Brazil
| | - Izadora Almeida Perez
- Center for Chemical, Pharmaceutical and Food Science, University Federal of Pelotas, Pelotas, Rio Grande do Sul, Brazil
| | | | - Rosane da Silva Rodrigues
- Center for Chemical, Pharmaceutical and Food Science, University Federal of Pelotas, Pelotas, Rio Grande do Sul, Brazil
| | - Patrícia Diaz de Oliveira
- Department of Food Science and Technology, Eliseu Maciel Faculty of Agronomy, Federal University of Pelotas, Pelotas, Rio Grande do Sul, Brazil
- Center for Chemical, Pharmaceutical and Food Science, University Federal of Pelotas, Pelotas, Rio Grande do Sul, Brazil
| | - Angelita da Silveira Moreira
- Department of Food Science and Technology, Eliseu Maciel Faculty of Agronomy, Federal University of Pelotas, Pelotas, Rio Grande do Sul, Brazil
- Technological Development Center, Biotechnology, Federal University of Pelotas, Pelotas, Rio Grande do Sul, Brazil
- Center for Chemical, Pharmaceutical and Food Science, University Federal of Pelotas, Pelotas, Rio Grande do Sul, Brazil
- * E-mail:
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20
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Noreña-Caro D, Benton MG. Cyanobacteria as photoautotrophic biofactories of high-value chemicals. J CO2 UTIL 2018. [DOI: 10.1016/j.jcou.2018.10.008] [Citation(s) in RCA: 52] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
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21
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Polyhydroxyalkanoate synthesis based on glycerol and implementation of the process under conditions of pilot production. Appl Microbiol Biotechnol 2018; 103:225-237. [PMID: 30367183 DOI: 10.1007/s00253-018-9460-0] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2018] [Revised: 10/11/2018] [Accepted: 10/12/2018] [Indexed: 10/28/2022]
Abstract
The present study addresses the synthesis and properties of polyhydroxyalkanoates (PHA) of different composition synthesized by Cupriavidus eutrophus B-10646 using glycerol as a carbon substrate. Poly(3-hydroxybutyrate) [P(3HB)] was effectively synthesized in fed-batch culture in a 30-L fermenter on glycerol of various purification degrees, with 99.5, 99.7, and 82.1% content of the main component. Purified glycerol (99.7%) was used for 150-L pilot scale fermentation. The total biomass and P(3HB) concentration reached 110 and 85.8 g/L, respectively, after 45 h of fed-batch fermentation. An average volumetric productivity of P(3HB) was 1.83 g/(L h). The degree of crystallinity and molecular weight of P(3HB) synthesized on glycerol were lower than and temperature characteristics were the same as those of P(3HB) synthesized on sugars.
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22
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Salakkam A, Webb C. Production of poly(3-hydroxybutyrate) from a complete feedstock derived from biodiesel by-products (crude glycerol and rapeseed meal). Biochem Eng J 2018. [DOI: 10.1016/j.bej.2018.06.018] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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23
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Biomass Extraction Using Non-Chlorinated Solvents for Biocompatibility Improvement of Polyhydroxyalkanoates. Polymers (Basel) 2018; 10:polym10070731. [PMID: 30960656 PMCID: PMC6403533 DOI: 10.3390/polym10070731] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2018] [Revised: 06/29/2018] [Accepted: 06/29/2018] [Indexed: 11/17/2022] Open
Abstract
An economically viable method to extract polyhydroxyalkanoates (PHAs) from cells is desirable for this biodegradable polymer of potential biomedical applications. In this work, two non-chlorinated solvents, cyclohexanone and γ-butyrolactone, were examined for extracting PHA produced by the bacterial strain Cupriavidus necator H16 cultivated on vegetable oil as a sole carbon source. The PHA produced was determined as a poly(3-hydroxybutyrate) (PHB) homopolyester. The extraction kinetics of the two solvents was determined using gel permeation chromatography (GPC). When cyclohexanone was used as the extraction solvent at 120 °C in 3 min, 95% of the PHB was recovered from the cells with a similar purity to that extracted using chloroform. With a decrease in temperature, the recovery yield decreased. At the same temperatures, the recovery yield of γ-butyrolactone was significantly lower. The effect of the two solvents on the quality of the extracted PHB was also examined using GPC and elemental analysis. The molar mass and dispersity of the obtained polymer were similar to that extracted using chloroform, while the nitrogen content of the PHB extracted using the two new solvents was slightly higher. In a nutshell, cyclohexanone in particular was identified as an expedient candidate to efficiently drive novel, sustainable PHA extraction processes.
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24
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Morya R, Kumar M, Thakur IS. Utilization of glycerol by Bacillus sp. ISTVK1 for production and characterization of Polyhydroxyvalerate. ACTA ACUST UNITED AC 2018. [DOI: 10.1016/j.biteb.2018.03.002] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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25
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Gahlawat G, Soni SK. Valorization of waste glycerol for the production of poly (3-hydroxybutyrate) and poly (3-hydroxybutyrate-co-3-hydroxyvalerate) copolymer by Cupriavidus necator and extraction in a sustainable manner. BIORESOURCE TECHNOLOGY 2017; 243:492-501. [PMID: 28692918 DOI: 10.1016/j.biortech.2017.06.139] [Citation(s) in RCA: 49] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2017] [Revised: 06/22/2017] [Accepted: 06/23/2017] [Indexed: 06/07/2023]
Abstract
Glycerol is a by-product of many industrial processes and huge amounts of it are generated in the form of waste, thereby necessitating a search for the method of its disposal. An interesting solution is the valorization of crude glycerol into value added product such as polyhydroxyalkanoates (PHAs). The feasibility of producing PHAs by Cupriavidus necator was evaluated using crude glycerol (WG). Various cultivation strategies were designed for the production of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) copolymer by adding different organic acids as precursors at different concentrations levels. Batch cultivation of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) production showed accumulation of 6.76g/L biomass containing 4.84g/L copolymer on WG with a maximum 3-hydroxyvalerate content of 24.6mol%. PHAs extraction using a non-toxic and recyclable solvent, 1,2 propylene carbonate, showed the highest recovery yield (90%) and purity (93%) at 120°C temperature and 30min incubation. This is the first report on jatropha based glycerol valorization for poly(3-hydroxybutyrate-co-3-hydroxyvalerate) production coupled with extraction using non-toxic solvent.
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Affiliation(s)
- Geeta Gahlawat
- Department of Microbiology, Panjab University, Chandigarh 160014, India.
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26
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Alves MI, Macagnan KL, Rodrigues AA, de Assis DA, Torres MM, de Oliveira PD, Furlan L, Vendruscolo CT, Moreira ADS. Poly(3-hydroxybutyrate)-P(3HB): Review of Production Process Technology. Ind Biotechnol (New Rochelle N Y) 2017. [DOI: 10.1089/ind.2017.0013] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Affiliation(s)
- Mariane I. Alves
- Department of Food Science and Technology, Faculty of Agronomy Eliseu Maciel, Federal University of Pelotas, Pelotas, Brazil
| | - Karine L. Macagnan
- Technological Development Center, Biotechnology, Federal University of Pelotas, Pelotas, Brazil
| | - Amanda A. Rodrigues
- Technological Development Center, Biotechnology, Federal University of Pelotas, Pelotas, Brazil
| | - Dener A. de Assis
- Center for Chemical, Pharmaceutical and Food Sciences, Federal University of Pelotas, Pelotas, Brazil
| | - Matheus M. Torres
- Technological Development Center, Biotechnology, Federal University of Pelotas, Pelotas, Brazil
| | - Patrícia D. de Oliveira
- Technological Development Center, Biotechnology, Federal University of Pelotas, Pelotas, Brazil
| | - Lígia Furlan
- Center for Chemical, Pharmaceutical and Food Sciences, Federal University of Pelotas, Pelotas, Brazil
| | - Claire T. Vendruscolo
- Technological Development Center, Biotechnology, Federal University of Pelotas, Pelotas, Brazil
| | - Angelita da S. Moreira
- Department of Food Science and Technology, Faculty of Agronomy Eliseu Maciel, Federal University of Pelotas, Pelotas, Brazil
- Center for Chemical, Pharmaceutical and Food Sciences, Federal University of Pelotas, Pelotas, Brazil
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27
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Complete factorial design to adjust pH and sugar concentrations in the inoculum phase of Ralstonia solanacearum to optimize P(3HB) production. PLoS One 2017; 12:e0180563. [PMID: 28704411 PMCID: PMC5507507 DOI: 10.1371/journal.pone.0180563] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2017] [Accepted: 06/16/2017] [Indexed: 11/19/2022] Open
Abstract
Poly(3-hydroxybutyrate) (P(3HB)) is a biodegradable plastic biopolymer that accumulates as lipophilic inclusions in the cytoplasm of some microorganisms. The biotechnological process by which P(3HB) is synthesized occurs in two phases. The first phase involves cell growth in a complex culture medium, while the second phase involves polymer accumulation in the presence of excess carbon sources. As such, the efficiency of the second phase depends on the first phase. The aim of this study was to evaluate culture media with different concentrations of sucrose and glucose and different pH values in the inoculum phase of Ralstonia solanacearum RS with the intention of identifying methods by which the biomass yield could be increased, subsequently enhancing the yield of P(3HB). The culture medium was formulated according to the experimental planning type of central composite rotational design 22. The independent variables were pH and sugar concentration (sucrose and glucose), and the dependent variables were OD600nm, dry cell weight (DCW), and P(3HB) yield. The highest cell growth, estimated by the OD600nm (20.6) and DCW (5.35) values, was obtained when sucrose was used in the culture medium at a concentration above 35 g.L-1 in combination with an acidic pH. High polymer (45%) accumulation was also achieved under these conditions. Using glucose, the best results for OD600nm (12.5) and DCW (2.74) were also obtained at acidic pH but with a sugar concentration at the minimum values evaluated. Due to the significant accumulation of polymer in the cells that were still in the growth phase, the accumulating microorganism P(3HB) Ralstonia solanacearum RS can be classified as having type II metabolism in relation to the polymer accumulation phase, which is different from other Ralstonia spp. studied until this time.
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28
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Takahashi RYU, Castilho NAS, Silva MACD, Miotto MC, Lima AODS. Prospecting for Marine Bacteria for Polyhydroxyalkanoate Production on Low-Cost Substrates. Bioengineering (Basel) 2017; 4:bioengineering4030060. [PMID: 28952539 PMCID: PMC5615306 DOI: 10.3390/bioengineering4030060] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2017] [Revised: 06/17/2017] [Accepted: 06/17/2017] [Indexed: 11/30/2022] Open
Abstract
Polyhydroxyalkanoates (PHAs) are a class of biopolymers with numerous applications, but the high cost of production has prevented their use. To reduce this cost, there is a prospect for strains with a high PHA production and the ability to grow in low-cost by-products. In this context, the objective of this work was to evaluate marine bacteria capable of producing PHA. Using Nile red, 30 organisms among 155 were identified as PHA producers in the medium containing starch, and 27, 33, 22 and 10 strains were found to be positive in media supplemented with carboxymethyl cellulose, glycerol, glucose and Tween 80, respectively. Among the organisms studied, two isolates, LAMA 677 and LAMA 685, showed strong potential to produce PHA with the use of glycerol as the carbon source, and were selected for further studies. In the experiment used to characterize the growth kinetics, LAMA 677 presented a higher maximum specific growth rate (µmax = 0.087 h−1) than LAMA 685 (µmax = 0.049 h−1). LAMA 677 also reached a D-3-hydroxybutyrate (P(3HB)) content of 78.63% (dry biomass), which was 3.5 times higher than that of LAMA 685. In the assay of the production of P(3HB) from low-cost substrates (seawater and biodiesel waste glycerol), LAMA 677 reached a polymer content of 31.7%, while LAMA 685 reached 53.6%. Therefore, it is possible to conclude that the selected marine strains have the potential to produce PHA, and seawater and waste glycerol may be alternative substrates for the production of this polymer.
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Affiliation(s)
- Rodrigo Yoji Uwamori Takahashi
- Centro de Ciências Tecnológicas da Terra e do Mar, Universidade do Vale do Itajaí, R. Uruguai 458, Itajaí-SC 88302-202, Brazil.
| | | | - Marcus Adonai Castro da Silva
- Centro de Ciências Tecnológicas da Terra e do Mar, Universidade do Vale do Itajaí, R. Uruguai 458, Itajaí-SC 88302-202, Brazil.
| | - Maria Cecilia Miotto
- Centro de Ciências Tecnológicas da Terra e do Mar, Universidade do Vale do Itajaí, R. Uruguai 458, Itajaí-SC 88302-202, Brazil.
| | - André Oliveira de Souza Lima
- Centro de Ciências Tecnológicas da Terra e do Mar, Universidade do Vale do Itajaí, R. Uruguai 458, Itajaí-SC 88302-202, Brazil.
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Fed-Batch Synthesis of Poly(3-Hydroxybutyrate) and Poly(3-Hydroxybutyrate-co-4-Hydroxybutyrate) from Sucrose and 4-Hydroxybutyrate Precursors by Burkholderia sacchari Strain DSM 17165. Bioengineering (Basel) 2017; 4:bioengineering4020036. [PMID: 28952515 PMCID: PMC5590455 DOI: 10.3390/bioengineering4020036] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2017] [Revised: 04/13/2017] [Accepted: 04/19/2017] [Indexed: 11/22/2022] Open
Abstract
Based on direct sucrose conversion, the bacterium Burkholderia sacchari is an excellent producer of the microbial homopolyester poly(3-hydroxybutyrate) (PHB). Restrictions of the strain’s wild type in metabolizing structurally related 3-hydroxyvalerate (3HV) precursors towards 3HV-containing polyhydroxyalkanoate (PHA) copolyester calls for alternatives. We demonstrate the highly productive biosynthesis of PHA copolyesters consisting of 3-hydroxybuytrate (3HB) and 4-hydroxybutyrate (4HB) monomers. Controlled bioreactor cultivations were carried out using saccharose from the Brazilian sugarcane industry as the main carbon source, with and without co-feeding with the 4HB-related precursor γ-butyrolactone (GBL). Without GBL co-feeding, the homopolyester PHB was produced at a volumetric productivity of 1.29 g/(L·h), a mass fraction of 0.52 g PHB per g biomass, and a final PHB concentration of 36.5 g/L; the maximum specific growth rate µmax amounted to 0.15 1/h. Adding GBL, we obtained 3HB and 4HB monomers in the polyester at a volumetric productivity of 1.87 g/(L·h), a mass fraction of 0.72 g PHA per g biomass, a final PHA concentration of 53.7 g/L, and a µmax of 0.18 1/h. Thermoanalysis revealed improved material properties of the second polyester in terms of reduced melting temperature Tm (161 °C vs. 178 °C) and decreased degree of crystallinity Xc (24% vs. 71%), indicating its enhanced suitability for polymer processing.
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30
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Guzman Lagunes F, Winterburn JB. Effect of limonene on the heterotrophic growth and polyhydroxybutyrate production by Cupriavidus necator H16. BIORESOURCE TECHNOLOGY 2016; 221:336-343. [PMID: 27658171 DOI: 10.1016/j.biortech.2016.09.045] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2016] [Revised: 09/08/2016] [Accepted: 09/11/2016] [Indexed: 06/06/2023]
Abstract
The inhibitory effect of limonene on polyhydroxybutyrate (PHB) production in Cupriavidus necator H16 was studied. Firstly, results demonstrate the feasibility of using orange juicing waste (OJW) as a substrate for PHB production. An intracellular PHB content of 81.4% (w/w) was attained for a total dry matter concentration of 9.58gL-1, when the OJW medium was used. Later, a mineral medium designed to mimic the nutrient levels found in the complex medium derived from OJW was used to study the effect of limonene on the production of PHB. Results showed a drop in specific growth rate (μ) of more than 50% when the initial limonene concentration was 2% (v/v) compared to the limonene free medium. This work highlights the importance of a limonene recovery stage prior to fermentation, to maintain levels below 1% (v/v) in the medium, adding value to the OJW and enhancing the fermentation process productivity.
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Affiliation(s)
- F Guzman Lagunes
- School of Chemical Engineering and Analytical Science, The Mill, The University of Manchester, Manchester M13 9PL, UK
| | - J B Winterburn
- School of Chemical Engineering and Analytical Science, The Mill, The University of Manchester, Manchester M13 9PL, UK.
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31
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Anjum A, Zuber M, Zia KM, Noreen A, Anjum MN, Tabasum S. Microbial production of polyhydroxyalkanoates (PHAs) and its copolymers: A review of recent advancements. Int J Biol Macromol 2016; 89:161-74. [PMID: 27126172 DOI: 10.1016/j.ijbiomac.2016.04.069] [Citation(s) in RCA: 292] [Impact Index Per Article: 36.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2016] [Revised: 04/15/2016] [Accepted: 04/22/2016] [Indexed: 02/02/2023]
Abstract
Traditional mineral oil based plastics are important commodity to enhance the comfort and quality of life but the accumulation of these plastics in the environment has become a major universal problem due to their low biodegradation. Solution to the plastic waste management includes incineration, recycling and landfill disposal methods. These processes are very time consuming and expensive. Biopolymers are important alternatives to the petroleum-based plastics due to environment friendly manufacturing processes, biodegradability and biocompatibility. Therefore use of novel biopolymers, such as polylactide, polysaccharides, aliphatic polyesters and polyhydroxyalkanoates is of interest. PHAs are biodegradable polyesters of hydroxyalkanoates (HA) produced from renewable resources by using microorganisms as intracellular carbon and energy storage compounds. Even though PHAs are promising candidate for biodegradable polymers, however, the production cost limit their application on an industrial scale. This article provides an overview of various substrates, microorganisms for the economical production of PHAs and its copolymers. Recent advances in PHAs to reduce the cost and to improve the performance of PHAs have also been discussed.
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Affiliation(s)
- Anbreen Anjum
- Institute of Chemistry, Government College University, Faisalabad 38030, Pakistan
| | - Mohammad Zuber
- Institute of Chemistry, Government College University, Faisalabad 38030, Pakistan.
| | - Khalid Mahmood Zia
- Institute of Chemistry, Government College University, Faisalabad 38030, Pakistan
| | - Aqdas Noreen
- Institute of Chemistry, Government College University, Faisalabad 38030, Pakistan
| | | | - Shazia Tabasum
- Institute of Chemistry, Government College University, Faisalabad 38030, Pakistan
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32
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Ganesh M, Senthamarai A, Shanmughapriya S, Natarajaseenivasan K. Effective production of low crystallinity Poly(3-hydroxybutyrate) by recombinant E. coli strain JM109 using crude glycerol as sole carbon source. BIORESOURCE TECHNOLOGY 2015; 192:677-681. [PMID: 26094193 DOI: 10.1016/j.biortech.2015.06.042] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2015] [Revised: 06/08/2015] [Accepted: 06/09/2015] [Indexed: 06/04/2023]
Abstract
Utilization of bio-diesel by-products (glycerol) for microbial polymer production has created a novel biorefinery concept. In the present study, recombinant Escherichia coli JM109 was used for the production of P(3 HB) from glycerol as carbon source. Batch fermentation in a 7.5L bioreactor with the statistically optimized culture condition (pre-treated glycerol: 27.5 g/L and casein hydrolysate: 5.25 g/L) scaled up the P3HB production to 65% (∼ 8 g/L). FTIR, (1)H and (13)C NMR analysis proved the polymer produced to be P(3 HB). Gel permeation chromatography, Differential Scanning Calorimetry (DSC) and thermogravimetric analysis (TGA) demonstrated the produced P(3 HB) to have high molecular weight (2.84 × 10(6)) and lowered crystallinity (∼ 30%) compared to commercial polymer. Integrating the production efficiency and the thermal characteristics of the polymer produced by recombinant E. coli, the viability and sustainability of biofuels and biopolymers for economic human need could be enhanced.
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Affiliation(s)
- Mohan Ganesh
- Medical Microbiology Laboratory, Department of Microbiology, Centre for Excellence in Life Sciences, Bharathidasan University, Tiruchirappalli 620024, Tamil Nadu, India
| | - Arivazhagan Senthamarai
- Medical Microbiology Laboratory, Department of Microbiology, Centre for Excellence in Life Sciences, Bharathidasan University, Tiruchirappalli 620024, Tamil Nadu, India
| | - Santhanam Shanmughapriya
- Medical Microbiology Laboratory, Department of Microbiology, Centre for Excellence in Life Sciences, Bharathidasan University, Tiruchirappalli 620024, Tamil Nadu, India
| | - Kalimuthusamy Natarajaseenivasan
- Medical Microbiology Laboratory, Department of Microbiology, Centre for Excellence in Life Sciences, Bharathidasan University, Tiruchirappalli 620024, Tamil Nadu, India.
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33
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Koller M, Rodríguez-Contreras A. Techniques for tracing PHA-producing organisms and for qualitative and quantitative analysis of intra- and extracellular PHA. Eng Life Sci 2015. [DOI: 10.1002/elsc.201400228] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Affiliation(s)
- Martin Koller
- Department of Physical and Theoretical Chemistry, Institute of Chemistry; University of Graz; Graz Austria
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