1
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Ahmed-Belkacem R, Hausdorff M, Delpal A, Sutto-Ortiz P, Colmant AMG, Touret F, Ogando NS, Snijder EJ, Canard B, Coutard B, Vasseur JJ, Decroly E, Debart F. Potent Inhibition of SARS-CoV-2 nsp14 N7-Methyltransferase by Sulfonamide-Based Bisubstrate Analogues. J Med Chem 2022; 65:6231-6249. [PMID: 35439007 PMCID: PMC9045040 DOI: 10.1021/acs.jmedchem.2c00120] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2022] [Indexed: 12/15/2022]
Abstract
Enzymes involved in RNA capping of SARS-CoV-2 are essential for the stability of viral RNA, translation of mRNAs, and virus evasion from innate immunity, making them attractive targets for antiviral agents. In this work, we focused on the design and synthesis of nucleoside-derived inhibitors against the SARS-CoV-2 nsp14 (N7-guanine)-methyltransferase (N7-MTase) that catalyzes the transfer of the methyl group from the S-adenosyl-l-methionine (SAM) cofactor to the N7-guanosine cap. Seven compounds out of 39 SAM analogues showed remarkable double-digit nanomolar inhibitory activity against the N7-MTase nsp14. Molecular docking supported the structure-activity relationships of these inhibitors and a bisubstrate-based mechanism of action. The three most potent inhibitors significantly stabilized nsp14 (ΔTm ≈ 11 °C), and the best inhibitor demonstrated high selectivity for nsp14 over human RNA N7-MTase.
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Affiliation(s)
| | - Marcel Hausdorff
- IBMM,
University of Montpellier, CNRS, ENSCM, 34293 Montpellier, cedex 5, France
| | - Adrien Delpal
- AFMB,
University of Aix-Marseille, CNRS, 13288 Marseille, cedex 9, France
| | | | - Agathe M. G. Colmant
- IHU
Méditerranée Infection, Unité Virus Emergents, University of Aix-Marseille, IRD 190, INSERM 1207, 13005 Marseille, France
| | - Franck Touret
- IHU
Méditerranée Infection, Unité Virus Emergents, University of Aix-Marseille, IRD 190, INSERM 1207, 13005 Marseille, France
| | - Natacha S. Ogando
- Department
of Medical Microbiology, Leiden University
Medical Center, 2333 ZA Leiden, The Netherlands
| | - Eric J. Snijder
- Department
of Medical Microbiology, Leiden University
Medical Center, 2333 ZA Leiden, The Netherlands
| | - Bruno Canard
- AFMB,
University of Aix-Marseille, CNRS, 13288 Marseille, cedex 9, France
| | - Bruno Coutard
- IHU
Méditerranée Infection, Unité Virus Emergents, University of Aix-Marseille, IRD 190, INSERM 1207, 13005 Marseille, France
| | - Jean-Jacques Vasseur
- IBMM,
University of Montpellier, CNRS, ENSCM, 34293 Montpellier, cedex 5, France
| | - Etienne Decroly
- AFMB,
University of Aix-Marseille, CNRS, 13288 Marseille, cedex 9, France
| | - Françoise Debart
- IBMM,
University of Montpellier, CNRS, ENSCM, 34293 Montpellier, cedex 5, France
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2
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Satteyyanaidu V, Chandrashekhar R, Reddy BVS, Lalli C. Modulating Prins Cyclization
versus
Tandem Prins Processes for the Synthesis of Hexahydro‐1
H
‐pyrano[3,4‐
c
]chromenes. European J Org Chem 2020. [DOI: 10.1002/ejoc.202000220] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Vallabhareddy Satteyyanaidu
- Fluoro & Agrochemicals CSIR-Indian Institute of Chemical Technology Hyderabad 500 007
- Academy of Scientific and Innovative Research (AcSIR) New Delhi 110025 India
| | - Rapelli Chandrashekhar
- Fluoro & Agrochemicals CSIR-Indian Institute of Chemical Technology Hyderabad 500 007
- Academy of Scientific and Innovative Research (AcSIR) New Delhi 110025 India
| | - B. V. Subba Reddy
- Fluoro & Agrochemicals CSIR-Indian Institute of Chemical Technology Hyderabad 500 007
- Academy of Scientific and Innovative Research (AcSIR) New Delhi 110025 India
| | - Claudia Lalli
- CNRS ISCR – UMR 6226 Univ Rennes 35000 Rennes France
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3
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Paprocki D, Madej A, Koszelewski D, Brodzka A, Ostaszewski R. Multicomponent Reactions Accelerated by Aqueous Micelles. Front Chem 2018; 6:502. [PMID: 30406083 PMCID: PMC6204348 DOI: 10.3389/fchem.2018.00502] [Citation(s) in RCA: 62] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2018] [Accepted: 10/02/2018] [Indexed: 11/20/2022] Open
Abstract
Multicomponent reactions are powerful synthetic tools for the efficient creation of complex organic molecules in an one-pot one-step fashion. Moreover, the amount of solvents and energy needed for separation and purification of intermediates is significantly reduced what is beneficial from the green chemistry issues point of view. This review highlights the development of multicomponent reactions conducted using aqueous micelles systems during the last two decades.
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Affiliation(s)
- Daniel Paprocki
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
| | - Arleta Madej
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
| | | | - Anna Brodzka
- Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland
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4
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Guyon H, Chachignon H, Cahard D. CF 3SO 2X (X = Na, Cl) as reagents for trifluoromethylation, trifluoromethylsulfenyl-, -sulfinyl- and -sulfonylation. Part 1: Use of CF 3SO 2Na. Beilstein J Org Chem 2017; 13:2764-2799. [PMID: 30018665 PMCID: PMC5753172 DOI: 10.3762/bjoc.13.272] [Citation(s) in RCA: 65] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2017] [Accepted: 11/15/2017] [Indexed: 11/23/2022] Open
Abstract
Sodium trifluoromethanesulfinate, CF3SO2Na, and trifluoromethanesulfonyl chloride, CF3SO2Cl, are two popular reagents that are widely used for the direct trifluoromethylation of a large range of substrates. Further, these two reagents are employed for the direct trifluoromethylsulfenylation and trifluoromethylsulfinylation, the introduction of the SCF3 and the S(O)CF3 group, respectively. In addition to the aforementioned reactions, the versatility of these two reagents is presented in other reactions such as sulfonylation and chlorination. This first part is dedicated to sodium trifluoromethanesulfinate.
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Affiliation(s)
- Hélène Guyon
- UMR 6014 CNRS COBRA, Normandie Université, 1 rue Tesnière, 76821 Mont Saint Aignan, France
| | - Hélène Chachignon
- UMR 6014 CNRS COBRA, Normandie Université, 1 rue Tesnière, 76821 Mont Saint Aignan, France
| | - Dominique Cahard
- UMR 6014 CNRS COBRA, Normandie Université, 1 rue Tesnière, 76821 Mont Saint Aignan, France
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5
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Wu WL, Burnett DA, Clader J, Greenlee WJ, Jiang Q, Hyde LA, Del Vecchio RA, Cohen-Williams ME, Song L, Lee J, Terracina G, Zhang Q, Nomeir A, Parker EM, Zhang L. Design and synthesis of water soluble β-aminosulfone analogues of SCH 900229 as γ-secretase inhibitors. Bioorg Med Chem Lett 2016; 26:5836-5841. [PMID: 27836402 DOI: 10.1016/j.bmcl.2016.04.095] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2016] [Revised: 04/27/2016] [Accepted: 04/28/2016] [Indexed: 11/16/2022]
Abstract
In this paper we describe our strategy to improve the aqueous solubility of SCH 900229, a potent PS1-selective γ-secretase inhibitor for the treatment of Alzheimer's disease. Incorporation of ionizable amino groups into the side chain terminal generates water soluble β-aminosulfone analogues of SCH 900229 that maintain robust in vitro potency and in vivo efficacy.
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Affiliation(s)
- Wen-Lian Wu
- Merck Research Laboratories, 2015 Galloping Hill Rd, Kenilworth, NJ 07033, USA
| | - Duane A Burnett
- Merck Research Laboratories, 2015 Galloping Hill Rd, Kenilworth, NJ 07033, USA
| | - John Clader
- Merck Research Laboratories, 2015 Galloping Hill Rd, Kenilworth, NJ 07033, USA
| | - William J Greenlee
- Merck Research Laboratories, 2015 Galloping Hill Rd, Kenilworth, NJ 07033, USA
| | - Qin Jiang
- Albany Molecular Research, Inc., 26 Corporate Cir, Albany, NY 12212, USA
| | - Lynn A Hyde
- Merck Research Laboratories, 2015 Galloping Hill Rd, Kenilworth, NJ 07033, USA
| | | | | | - Lixin Song
- Merck Research Laboratories, 2015 Galloping Hill Rd, Kenilworth, NJ 07033, USA
| | - Julie Lee
- Merck Research Laboratories, 2015 Galloping Hill Rd, Kenilworth, NJ 07033, USA
| | - Giuseppe Terracina
- Merck Research Laboratories, 2015 Galloping Hill Rd, Kenilworth, NJ 07033, USA
| | - Qi Zhang
- Merck Research Laboratories, 2015 Galloping Hill Rd, Kenilworth, NJ 07033, USA
| | - Amin Nomeir
- Merck Research Laboratories, 2015 Galloping Hill Rd, Kenilworth, NJ 07033, USA
| | - Eric M Parker
- Merck Research Laboratories, 2015 Galloping Hill Rd, Kenilworth, NJ 07033, USA
| | - Lili Zhang
- Merck Research Laboratories, 2015 Galloping Hill Rd, Kenilworth, NJ 07033, USA
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6
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Dar AA, Enjamuri N, Shadab M, Ali N, Khan AT. Synthesis of Unsymmetrical Sulfides and Their Oxidation to Sulfones to Discover Potent Antileishmanial Agents. ACS COMBINATORIAL SCIENCE 2015; 17:671-81. [PMID: 26441303 DOI: 10.1021/acscombsci.5b00044] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Unsymmetrical sulfides were first synthesized using combinations of a 1,3-dicarbonyl, an aromatic aldehyde and a thiol in the presence of 10 mol % ethanolic piperidine. These sulfides derivatives were subsequently converted into corresponding sulfones via oxidation in the presence of m-chloroperoxybenzoic acid (m-CPBA) at ice-bath to room temperature. The former reaction was achieved at room temperature through one-pot three-component. The later was obtained in good yields using mild reaction conditions with flexibility in choice from a range of substrates. The antimicrobial properties of the newly synthesized sulfone derivatives were investigated against the protozoan parasite, Leishmania donovani, a causative agent of visceral leishmaniasis (VL). Nine sulfone derivatives were found to be efficacious and exhibited significant antimicrobial activity. Further, these compounds were nontoxic on murine peritoneal macrophages thus eliminating potential cytoxicity in the host cells. These compounds may be indicated as potential leads in the treatment of visceral leishmaniasis.
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Affiliation(s)
- Ajaz A. Dar
- Department
of Chemistry, Indian Institute of Technology Guwahati, Guwahati 781 039, India
| | - Nagasuresh Enjamuri
- Department
of Chemistry, Indian Institute of Technology Guwahati, Guwahati 781 039, India
| | | | - Nahid Ali
- Infectious
Diseases and Immunology Division, Indian Institute of Chemical Biology, 4, Raja S.C. Mullick Road, Kolkata 700 032, India
| | - Abu T. Khan
- Department
of Chemistry, Indian Institute of Technology Guwahati, Guwahati 781 039, India
- Aliah University, IIA/27, New
Town, Kolkata-700 156, West Bengal, India
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7
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Mukherjee P, Paul S, Das AR. Expeditious synthesis of functionalized tricyclic 4-spiro pyrano[2,3-c]pyrazoles in aqueous medium using dodecylbenzenesulphonic acid as a Brønsted acid–surfactant-combined catalyst. NEW J CHEM 2015. [DOI: 10.1039/c5nj01728a] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
An eco-friendly multicomponent strategy has been developed to access a single tricyclic molecular scaffold possessing pyran, pyrazole and spiro functionalities.
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Affiliation(s)
- Prasun Mukherjee
- Department of Chemistry
- University of Calcutta
- Kolkata-700009
- India
| | - Sanjay Paul
- Department of Chemistry
- University of Calcutta
- Kolkata-700009
- India
| | - Asish R. Das
- Department of Chemistry
- University of Calcutta
- Kolkata-700009
- India
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8
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Geng ZC, Zhang SY, Li NK, Li N, Chen J, Li HY, Wang XW. Organocatalytic Diversity-Oriented Asymmetric Synthesis of Tricyclic Chroman Derivatives. J Org Chem 2014; 79:10772-85. [DOI: 10.1021/jo501560m] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Affiliation(s)
- Zhi-Cong Geng
- Key Laboratory
of Organic
Synthesis of Jiangsu Province, College of Chemistry, Chemical Engineering
and Materials Science, Soochow University, Suzhou 215123, People’s Republic of China
| | - Shao-Yun Zhang
- Key Laboratory
of Organic
Synthesis of Jiangsu Province, College of Chemistry, Chemical Engineering
and Materials Science, Soochow University, Suzhou 215123, People’s Republic of China
| | - Nai-Kai Li
- Key Laboratory
of Organic
Synthesis of Jiangsu Province, College of Chemistry, Chemical Engineering
and Materials Science, Soochow University, Suzhou 215123, People’s Republic of China
| | - Ning Li
- Key Laboratory
of Organic
Synthesis of Jiangsu Province, College of Chemistry, Chemical Engineering
and Materials Science, Soochow University, Suzhou 215123, People’s Republic of China
| | - Jian Chen
- Key Laboratory
of Organic
Synthesis of Jiangsu Province, College of Chemistry, Chemical Engineering
and Materials Science, Soochow University, Suzhou 215123, People’s Republic of China
| | - Hai-Yan Li
- Key Laboratory
of Organic
Synthesis of Jiangsu Province, College of Chemistry, Chemical Engineering
and Materials Science, Soochow University, Suzhou 215123, People’s Republic of China
| | - Xing-Wang Wang
- Key Laboratory
of Organic
Synthesis of Jiangsu Province, College of Chemistry, Chemical Engineering
and Materials Science, Soochow University, Suzhou 215123, People’s Republic of China
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9
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Xu XH, Matsuzaki K, Shibata N. Synthetic methods for compounds having CF3-S units on carbon by trifluoromethylation, trifluoromethylthiolation, triflylation, and related reactions. Chem Rev 2014; 115:731-64. [PMID: 25121343 DOI: 10.1021/cr500193b] [Citation(s) in RCA: 836] [Impact Index Per Article: 83.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Xiu-Hua Xu
- Department of Nanopharmaceutical Science and Department of Frontier Materials, Nagoya Institute of Technology , Gokiso, Showa-ku, Nagoya 466-8555, Japan
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10
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Cacabelos R, Cacabelos P, Torrellas C, Tellado I, Carril JC. Pharmacogenomics of Alzheimer's disease: novel therapeutic strategies for drug development. Methods Mol Biol 2014; 1175:323-556. [PMID: 25150875 DOI: 10.1007/978-1-4939-0956-8_13] [Citation(s) in RCA: 54] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Alzheimer's disease (AD) is a major problem of health and disability, with a relevant economic impact on our society. Despite important advances in pathogenesis, diagnosis, and treatment, its primary causes still remain elusive, accurate biomarkers are not well characterized, and the available pharmacological treatments are not cost-effective. As a complex disorder, AD is a polygenic and multifactorial clinical entity in which hundreds of defective genes distributed across the human genome may contribute to its pathogenesis. Diverse environmental factors, cerebrovascular dysfunction, and epigenetic phenomena, together with structural and functional genomic dysfunctions, lead to amyloid deposition, neurofibrillary tangle formation, and premature neuronal death, the major neuropathological hallmarks of AD. Future perspectives for the global management of AD predict that genomics and proteomics may help in the search for reliable biomarkers. In practical terms, the therapeutic response to conventional drugs (cholinesterase inhibitors, multifactorial strategies) is genotype-specific. Genomic factors potentially involved in AD pharmacogenomics include at least five categories of gene clusters: (1) genes associated with disease pathogenesis; (2) genes associated with the mechanism of action of drugs; (3) genes associated with drug metabolism (phase I and II reactions); (4) genes associated with drug transporters; and (5) pleiotropic genes involved in multifaceted cascades and metabolic reactions. The implementation of pharmacogenomic strategies will contribute to optimize drug development and therapeutics in AD and related disorders.
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Affiliation(s)
- Ramón Cacabelos
- Chair of Genomic Medicine, Camilo José Cela University, 28692, Villanueva de la Cañada, Madrid, Spain,
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