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Wang Y, Wahab M, Hong T, Molinari K, Gauvreau GM, Cusack RP, Gao Z, Satia I, Fang Q. Automated Cough Analysis with Convolutional Recurrent Neural Network. Bioengineering (Basel) 2024; 11:1105. [PMID: 39593765 PMCID: PMC11591875 DOI: 10.3390/bioengineering11111105] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2024] [Revised: 10/14/2024] [Accepted: 10/22/2024] [Indexed: 11/28/2024] Open
Abstract
Chronic cough is associated with several respiratory diseases and is a significant burden on physical, social, and psychological health. Non-invasive, real-time, continuous, and quantitative monitoring tools are highly desired to assess cough severity, the effectiveness of treatment, and monitor disease progression in clinical practice and research. There are currently limited tools to quantitatively measure spontaneous coughs in daily living settings in clinical trials and in clinical practice. In this study, we developed a machine learning model for the detection and classification of cough sounds. Mel spectrograms are utilized as a key feature representation to capture the temporal and spectral characteristics of coughs. We applied this approach to automate cough analysis using 300 h of audio recordings from cough challenge clinical studies conducted in a clinical lab setting. A number of machine learning algorithms were studied and compared, including decision tree, support vector machine, k-nearest neighbors, logistic regression, random forest, and neural network. We identified that for this dataset, the CRNN approach is the most effective method, reaching 98% accuracy in identifying individual coughs from the audio data. These findings provide insights into the strengths and limitations of various algorithms, highlighting the potential of CRNNs in analyzing complex cough patterns. This research demonstrates the potential of neural network models in fully automated cough monitoring. The approach requires validation in detecting spontaneous coughs in patients with refractory chronic cough in a real-life setting.
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Affiliation(s)
- Yiping Wang
- Department of Engineering Physics, McMaster University, Hamilton, ON L8S 4K1, Canada; (Y.W.)
| | - Mustafaa Wahab
- Department of Medicine, McMaster University, Hamilton, ON L8S 4K1, Canada; (M.W.); (G.M.G.); (R.P.C.); (I.S.)
| | - Tianqi Hong
- School of Biomedical Engineering, McMaster University, Hamilton, ON L8S 4K1, Canada;
| | - Kyle Molinari
- Department of Engineering Physics, McMaster University, Hamilton, ON L8S 4K1, Canada; (Y.W.)
| | - Gail M. Gauvreau
- Department of Medicine, McMaster University, Hamilton, ON L8S 4K1, Canada; (M.W.); (G.M.G.); (R.P.C.); (I.S.)
| | - Ruth P. Cusack
- Department of Medicine, McMaster University, Hamilton, ON L8S 4K1, Canada; (M.W.); (G.M.G.); (R.P.C.); (I.S.)
| | - Zhen Gao
- W Booth School of Engineering Practice & Technology, McMaster University, Hamilton, ON L8S 4K1, Canada;
| | - Imran Satia
- Department of Medicine, McMaster University, Hamilton, ON L8S 4K1, Canada; (M.W.); (G.M.G.); (R.P.C.); (I.S.)
| | - Qiyin Fang
- Department of Engineering Physics, McMaster University, Hamilton, ON L8S 4K1, Canada; (Y.W.)
- School of Biomedical Engineering, McMaster University, Hamilton, ON L8S 4K1, Canada;
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2
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Terranova F, Betti L, Ferrario V, Friard O, Ludynia K, Petersen GS, Mathevon N, Reby D, Favaro L. Windy events detection in big bioacoustics datasets using a pre-trained Convolutional Neural Network. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 949:174868. [PMID: 39034006 DOI: 10.1016/j.scitotenv.2024.174868] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2024] [Revised: 07/16/2024] [Accepted: 07/16/2024] [Indexed: 07/23/2024]
Abstract
Passive Acoustic Monitoring (PAM), which involves using autonomous record units for studying wildlife behaviour and distribution, often requires handling big acoustic datasets collected over extended periods. While these data offer invaluable insights about wildlife, their analysis can present challenges in dealing with geophonic sources. A major issue in the process of detection of target sounds is represented by wind-induced noise. This can lead to false positive detections, i.e., energy peaks due to wind gusts misclassified as biological sounds, or false negative, i.e., the wind noise masks the presence of biological sounds. Acoustic data dominated by wind noise makes the analysis of vocal activity unreliable, thus compromising the detection of target sounds and, subsequently, the interpretation of the results. Our work introduces a straightforward approach for detecting recordings affected by windy events using a pre-trained convolutional neural network. This process facilitates identifying wind-compromised data. We consider this dataset pre-processing crucial for ensuring the reliable use of PAM data. We implemented this preprocessing by leveraging YAMNet, a deep learning model for sound classification tasks. We evaluated YAMNet as-is ability to detect wind-induced noise and tested its performance in a Transfer Learning scenario by using our annotated data from the Stony Point Penguin Colony in South Africa. While the classification of YAMNet as-is achieved a precision of 0.71, and recall of 0.66, those metrics strongly improved after the training on our annotated dataset, reaching a precision of 0.91, and recall of 0.92, corresponding to a relative increment of >28 %. Our study demonstrates the promising application of YAMNet in the bioacoustics and ecoacoustics fields, addressing the need for wind-noise-free acoustic data. We released an open-access code that, combined with the efficiency and peak performance of YAMNet, can be used on standard laptops for a broad user base.
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Affiliation(s)
- Francesca Terranova
- Department of Life Sciences and Systems Biology, University of Turin, Turin, Italy.
| | - Lorenzo Betti
- Department of Network and Data Science, Central European University, Vienna, Austria
| | - Valeria Ferrario
- Department of Life Sciences and Systems Biology, University of Turin, Turin, Italy; Chester Zoo, Caughall Road, Chester, UK
| | - Olivier Friard
- Department of Life Sciences and Systems Biology, University of Turin, Turin, Italy
| | - Katrin Ludynia
- Southern African Foundation for the Conservation of Coastal Birds (SANCCOB), Cape Town, South Africa; Department of Biodiversity and Conservation Biology, University of the Western Cape, Robert Sobukwe Road, Bellville, South Africa
| | - Gavin Sean Petersen
- Southern African Foundation for the Conservation of Coastal Birds (SANCCOB), Cape Town, South Africa
| | - Nicolas Mathevon
- ENES Bioacoustics Research Lab, CRNL, University of Saint-Etienne, CNRS, Inserm, Saint-Etienne, France; Institut universitaire de France, Ministry of Higher Education, Research and Innovation, 1 rue Descartes, CEDEX 05, Paris, France; Ecole Pratique des Hautes Etudes, CHArt lab, PSL University, Paris, France
| | - David Reby
- ENES Bioacoustics Research Lab, CRNL, University of Saint-Etienne, CNRS, Inserm, Saint-Etienne, France; Institut universitaire de France, Ministry of Higher Education, Research and Innovation, 1 rue Descartes, CEDEX 05, Paris, France
| | - Livio Favaro
- Department of Life Sciences and Systems Biology, University of Turin, Turin, Italy; Stazione Zoologica Anton Dohrn, Naples, Italy
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Husssain S, Ayoub M, Wahid JA, Khan A, Alabrah A, Amran GA. Cough2COVID-19 detection using an enhanced multi layer ensemble deep learning framework and CoughFeatureRanker. Sci Rep 2024; 14:25207. [PMID: 39448760 PMCID: PMC11502923 DOI: 10.1038/s41598-024-76639-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2024] [Accepted: 10/15/2024] [Indexed: 10/26/2024] Open
Abstract
In response to the pressing requirement for precise and easily accessible COVID-19 detection methods, we present the Cough2COVID-19 framework, which is cost-effective, non-intrusive, and widely accessible. The conventional diagnostic methods, notably the PCR test, are encumbered by limitations such as cost and invasiveness. Consequently, the exploration of alternative solutions has gained momentum. Our innovative approach employs a multi-layer ensemble deep learning (MLEDL) framework that capitalizes on cough audio signals to achieve heightened efficiency in COVID-19 detection. This study introduces the Cough2COVID-19 framework, effectively addressing these challenges through AI-driven analysis. Additionally, this study proposed the CoughFeatureRanker algorithm, which delves into the robustness of pivotal features embedded within cough audios. The CoughFeatureRanker algorithm selects the most prominent features based on their optimal discriminatory performance from 15 features to detect COVID-19. The effectiveness of the CoughFeatureRanker algorithm within the ensemble framework is scrutinized, confirming its favorable influence on the accuracy of COVID-19 detection. The Cough2COVID-19 (MLEDL) framework achieves remarkable outcomes in COVID-19 detection through cough audio signals, boasting a specificity of 98%, sensitivity of 97%, accuracy of 98%, and an AUC score of 0.981. Our framework asserts its supremacy in precise non-invasive screening through an exhaustive comparison with cutting-edge methodologies. This groundbreaking innovation holds the potential to enhance urban resilience by transforming disease diagnosis, offering a significant approach to curtailing transmission risks and facilitating timely interventions in the ongoing battle against the pandemic.
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Affiliation(s)
- Shabir Husssain
- Institute of Biopharmaceutical and Health Engineering, Tsinghua Shenzhen International Graduate School, Tsinghua University, Shenzhen, 518055, China
| | - Muhammad Ayoub
- Department of Computer Science and Engineering, Shanghai Jiao Tong University, Shanghai, China
| | - Junaid Abdul Wahid
- School of Computer and Artificial Intelligence, Zhengzhou University, Henan, 450001, China
| | - Akmal Khan
- Department of Data Science, The Islamia University of Bahawalpur, Bahawalpur, Punjab, 63100, Pakistan
| | - Amerah Alabrah
- Department of Information Systems, College of Computer and Information Science, King Saud University, Riyadh, 11543, Saudi Arabia
| | - Gehad Abdullah Amran
- Department of Management Science and Engineering, Dalian University of Technology, Dalian, 116024, China.
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Kapetanidis P, Kalioras F, Tsakonas C, Tzamalis P, Kontogiannis G, Karamanidou T, Stavropoulos TG, Nikoletseas S. Respiratory Diseases Diagnosis Using Audio Analysis and Artificial Intelligence: A Systematic Review. SENSORS (BASEL, SWITZERLAND) 2024; 24:1173. [PMID: 38400330 PMCID: PMC10893010 DOI: 10.3390/s24041173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2023] [Revised: 02/03/2024] [Accepted: 02/04/2024] [Indexed: 02/25/2024]
Abstract
Respiratory diseases represent a significant global burden, necessitating efficient diagnostic methods for timely intervention. Digital biomarkers based on audio, acoustics, and sound from the upper and lower respiratory system, as well as the voice, have emerged as valuable indicators of respiratory functionality. Recent advancements in machine learning (ML) algorithms offer promising avenues for the identification and diagnosis of respiratory diseases through the analysis and processing of such audio-based biomarkers. An ever-increasing number of studies employ ML techniques to extract meaningful information from audio biomarkers. Beyond disease identification, these studies explore diverse aspects such as the recognition of cough sounds amidst environmental noise, the analysis of respiratory sounds to detect respiratory symptoms like wheezes and crackles, as well as the analysis of the voice/speech for the evaluation of human voice abnormalities. To provide a more in-depth analysis, this review examines 75 relevant audio analysis studies across three distinct areas of concern based on respiratory diseases' symptoms: (a) cough detection, (b) lower respiratory symptoms identification, and (c) diagnostics from the voice and speech. Furthermore, publicly available datasets commonly utilized in this domain are presented. It is observed that research trends are influenced by the pandemic, with a surge in studies on COVID-19 diagnosis, mobile data acquisition, and remote diagnosis systems.
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Affiliation(s)
- Panagiotis Kapetanidis
- Computer Engineering and Informatics Department, University of Patras, 26504 Patras, Greece (C.T.); (G.K.); (S.N.)
| | - Fotios Kalioras
- Computer Engineering and Informatics Department, University of Patras, 26504 Patras, Greece (C.T.); (G.K.); (S.N.)
| | - Constantinos Tsakonas
- Computer Engineering and Informatics Department, University of Patras, 26504 Patras, Greece (C.T.); (G.K.); (S.N.)
| | - Pantelis Tzamalis
- Computer Engineering and Informatics Department, University of Patras, 26504 Patras, Greece (C.T.); (G.K.); (S.N.)
| | - George Kontogiannis
- Computer Engineering and Informatics Department, University of Patras, 26504 Patras, Greece (C.T.); (G.K.); (S.N.)
| | - Theodora Karamanidou
- Pfizer Center for Digital Innovation, 55535 Thessaloniki, Greece; (T.K.); (T.G.S.)
| | | | - Sotiris Nikoletseas
- Computer Engineering and Informatics Department, University of Patras, 26504 Patras, Greece (C.T.); (G.K.); (S.N.)
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5
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Pentakota P, Rudraraju G, Sripada NR, Mamidgi B, Gottipulla C, Jalukuru C, Palreddy SD, Bhoge NKR, Firmal P, Yechuri V, Jain M, Peddireddi VS, Bhimarasetty DM, Sreenivas S, Prasad K KL, Joshi N, Vijayan S, Turaga S, Avasarala V. Screening COVID-19 by Swaasa AI platform using cough sounds: a cross-sectional study. Sci Rep 2023; 13:18284. [PMID: 37880351 PMCID: PMC10600180 DOI: 10.1038/s41598-023-45104-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2023] [Accepted: 10/16/2023] [Indexed: 10/27/2023] Open
Abstract
The Advent of Artificial Intelligence (AI) has led to the use of auditory data for detecting various diseases, including COVID-19. SARS-CoV-2 infection has claimed more than six million lives to date and therefore, needs a robust screening technique to control the disease spread. In the present study we created and validated the Swaasa AI platform, which uses the signature cough sound and symptoms presented by patients to screen and prioritize COVID-19 patients. We collected cough data from 234 COVID-19 suspects to validate our Convolutional Neural Network (CNN) architecture and Feedforward Artificial Neural Network (FFANN) (tabular features) based algorithm. The final output from both models was combined to predict the likelihood of having the disease. During the clinical validation phase, our model showed a 75.54% accuracy rate in detecting the likely presence of COVID-19, with 95.45% sensitivity and 73.46% specificity. We conducted pilot testing on 183 presumptive COVID subjects, of which 58 were truly COVID-19 positive, resulting in a Positive Predictive Value of 70.73%. Due to the high cost and technical expertise required for currently available rapid screening methods, there is a need for a cost-effective and remote monitoring tool that can serve as a preliminary screening method for potential COVID-19 subjects. Therefore, Swaasa would be highly beneficial in detecting the disease and could have a significant impact in reducing its spread.
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Affiliation(s)
| | | | | | | | | | - Charan Jalukuru
- Salcit Technologies, Jayabheri Silicon Towers, Hyderabad, India
| | | | | | - Priyanka Firmal
- Salcit Technologies, Jayabheri Silicon Towers, Hyderabad, India
| | - Venkat Yechuri
- Salcit Technologies, Jayabheri Silicon Towers, Hyderabad, India
| | - Manmohan Jain
- Salcit Technologies, Jayabheri Silicon Towers, Hyderabad, India
| | | | | | - S Sreenivas
- Andhra Medical College, Visakhapatnam, India
| | | | | | - Shibu Vijayan
- Qure.Ai Technologies, Oberoi Commerz II, Mumbai, India
| | | | - Vardhan Avasarala
- Otolaryngology - Head and Neck Surgery, Northeast Ohio Medical University, Rootstown, USA
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6
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Celik G. CovidCoughNet: A new method based on convolutional neural networks and deep feature extraction using pitch-shifting data augmentation for covid-19 detection from cough, breath, and voice signals. Comput Biol Med 2023; 163:107153. [PMID: 37321101 PMCID: PMC10249348 DOI: 10.1016/j.compbiomed.2023.107153] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2023] [Revised: 05/25/2023] [Accepted: 06/07/2023] [Indexed: 06/17/2023]
Abstract
This study proposes a new deep learning-based method that demonstrates high performance in detecting Covid-19 disease from cough, breath, and voice signals. This impressive method, named CovidCoughNet, consists of a deep feature extraction network (InceptionFireNet) and a prediction network (DeepConvNet). The InceptionFireNet architecture, based on Inception and Fire modules, was designed to extract important feature maps. The DeepConvNet architecture, which is made up of convolutional neural network blocks, was developed to predict the feature vectors obtained from the InceptionFireNet architecture. The COUGHVID dataset containing cough data and the Coswara dataset containing cough, breath, and voice signals were used as the data sets. The pitch-shifting technique was used to data augmentation the signal data, which significantly contributed to improving performance. Additionally, Chroma features (CF), Root mean square energy (RMSE), Spectral centroid (SC), Spectral bandwidth (SB), Spectral rolloff (SR), Zero crossing rate (ZCR), and Mel frequency cepstral coefficients (MFCC) feature extraction techniques were used to extract important features from voice signals. Experimental studies have shown that using the pitch-shifting technique improved performance by around 3% compared to raw signals. When the proposed model was used with the COUGHVID dataset (Healthy, Covid-19, and Symptomatic), a high performance of 99.19% accuracy, 0.99 precision, 0.98 recall, 0.98 F1-Score, 97.77% specificity, and 98.44% AUC was achieved. Similarly, when the voice data in the Coswara dataset was used, higher performance was achieved compared to the cough and breath studies, with 99.63% accuracy, 100% precision, 0.99 recall, 0.99 F1-Score, 99.24% specificity, and 99.24% AUC. Moreover, when compared with current studies in the literature, the proposed model was observed to exhibit highly successful performance. The codes and details of the experimental studies can be accessed from the relevant Github page: (https://github.com/GaffariCelik/CovidCoughNet).
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Affiliation(s)
- Gaffari Celik
- Agri Ibrahim Cecen University, Department of Computer Technology, Agri, Turkey.
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7
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Awais M, Bhuva A, Bhuva D, Fatima S, Sadiq T. Optimized DEC: An effective cough detection framework using optimal weighted Features-aided deep Ensemble classifier for COVID-19. Biomed Signal Process Control 2023:105026. [PMID: 37361196 PMCID: PMC10183638 DOI: 10.1016/j.bspc.2023.105026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Revised: 04/17/2023] [Accepted: 05/09/2023] [Indexed: 06/28/2023]
Abstract
Since the year 2019, the entire world has been facing the most hazardous and contagious disease as Corona Virus Disease 2019 (COVID-19). Based on the symptoms, the virus can be identified and diagnosed. Amongst, cough is the primary syndrome to detect COVID-19. Existing method requires a long processing time. Early screening and detection is a complex task. To surmount the research drawbacks, a novel ensemble-based deep learning model is designed on heuristic development. The prime intention of the designed work is to detect COVID-19 disease using cough audio signals. At the initial stage, the source signals are fetched and undergo for signal decomposition phase by Empirical Mean Curve Decomposition (EMCD). Consequently, the decomposed signal is called "Mel Frequency Cepstral Coefficients (MFCC), spectral features, and statistical features". Further, all three features are fused and provide the optimal weighted features with the optimal weight value with the help of "Modified Cat and Mouse Based Optimizer (MCMBO)". Lastly, the optimal weighted features are fed as input to the Optimized Deep Ensemble Classifier (ODEC) that is fused together with various classifiers such as "Radial Basis Function (RBF), Long-Short Term Memory (LSTM), and Deep Neural Network (DNN)". In order to attain the best detection results, the parameters in ODEC are optimized by the MCMBO algorithm. Throughout the validation, the designed method attains 96% and 92% concerning accuracy and precision. Thus, result analysis elucidates that the proposed work achieves the desired detective value that aids practitioners to early diagnose COVID-19 ailments.
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Affiliation(s)
- Muhammad Awais
- Department of Creative Technologies, Air University, Islamabad, Pakistan
| | - Abhishek Bhuva
- Department of Computer Science, University of Massachusetts Boston, United States
| | - Dipen Bhuva
- Department of EECS, Cleveland State University, United States
| | - Saman Fatima
- Department of Medical Education, The University of Lahore, Lahore, Pakistan
| | - Touseef Sadiq
- Department of Information and Communication Technology, University of Agder, Norway
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8
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Ribeiro P, Marques JAL, Rodrigues PM. COVID-19 Detection by Means of ECG, Voice, and X-ray Computerized Systems: A Review. Bioengineering (Basel) 2023; 10:bioengineering10020198. [PMID: 36829692 PMCID: PMC9952817 DOI: 10.3390/bioengineering10020198] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Revised: 01/31/2023] [Accepted: 02/01/2023] [Indexed: 02/05/2023] Open
Abstract
Since the beginning of 2020, Coronavirus Disease 19 (COVID-19) has attracted the attention of the World Health Organization (WHO). This paper looks into the infection mechanism, patient symptoms, and laboratory diagnosis, followed by an extensive assessment of different technologies and computerized models (based on Electrocardiographic signals (ECG), Voice, and X-ray techniques) proposed as a diagnostic tool for the accurate detection of COVID-19. The found papers showed high accuracy rate results, ranging between 85.70% and 100%, and F1-Scores from 89.52% to 100%. With this state-of-the-art, we concluded that the models proposed for the detection of COVID-19 already have significant results, but the area still has room for improvement, given the vast symptomatology and the better comprehension of individuals' evolution of the disease.
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Affiliation(s)
- Pedro Ribeiro
- CBQF—Centro de Biotecnologia e Química Fina—Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua de Diogo Botelho 1327, 4169-005 Porto, Portugal
| | | | - Pedro Miguel Rodrigues
- CBQF—Centro de Biotecnologia e Química Fina—Laboratório Associado, Escola Superior de Biotecnologia, Universidade Católica Portuguesa, Rua de Diogo Botelho 1327, 4169-005 Porto, Portugal
- Correspondence:
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9
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Najaran MHT. An evolutionary ensemble learning for diagnosing COVID-19 via cough signals. INTELLIGENT MEDICINE 2023; 3:S2667-1026(23)00002-5. [PMID: 36743333 PMCID: PMC9882956 DOI: 10.1016/j.imed.2023.01.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/22/2022] [Revised: 01/10/2023] [Accepted: 01/11/2023] [Indexed: 01/30/2023]
Abstract
Objective The spread of the COVID-19 disease has caused great concern around the world and detecting the positive cases is crucial in curbing the pandemic. One of the symptoms of the disease is the dry cough it causes. It has previously been shown that cough signals can be used to identify a variety of diseases including tuberculosis, asthma, etc. In this paper, we proposed an algorithm to diagnose via cough signals the COVID-19 disease. Methods The proposed algorithm is an ensemble scheme that consists of a number of base learners, where each base learner uses a different feature extractor method, including statistical approaches and convolutional neural networks (CNN) for automatic feature extraction. Features are extracted from the raw signal and some transforms performed it, including Fourier, wavelet, Hilbert-Huang, and short-term Fourier transforms. The outputs of these base-learners are aggregated via a weighted voting scheme, with the weights optimised via an evolutionary paradigm. This paper also proposes a memetic algorithm for training the CNNs in the base-learners, which combines the speed of gradient descent (GD) algorithms and global search space coverage of the evolutionary algorithms. Results Experiments were performed on the proposed algorithm and different rival algorithms which included a number of CNN architectures in the literature and generic machine learning algorithms. The results suggested that the proposed algorithm achieves better performance compared to the existing algorithms in diagnosing COVID-19 via cough signals. Conclusion This research showed that COVID-19 could be diagnosed via cough signals and CNNs could be employed to process these signals and it may be further improved by the optimization of CNN architecture.
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Peng P, Jiang K, You M, Xie J, Zhou H, Xu W, Lu J, Li X, Xu Y. Design of an Efficient CNN-based Cough Detection System on Lightweight FPGA. IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS 2023; PP:116-128. [PMID: 37018680 DOI: 10.1109/tbcas.2023.3236976] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/19/2023]
Abstract
Precisely and automatically detecting the cough sound is of vital clinical importance. Nevertheless, due to privacy protection considerations, transmitting the raw audio data to the cloud is not permitted, and therefore there is a great demand for an efficient, accurate, and low-cost solution at the edge device. To address this challenge, we propose a semi-custom software-hardware co-design methodology to help build the cough detection system. Specifically, we first design a scalable and compact convolutional neural network (CNN) structure that generates many network instances. Second, we develop a dedicated hardware accelerator to perform the inference computation efficiently, and then we find the optimal network instance by applying network design space exploration. Finally, we compile the optimal network and let it run on the hardware accelerator. The experimental results demonstrate that our model achieves 88.8% classification accuracy, 91.2% sensitivity, 86.5% specificity, and 86.5% precision, while the computation complexity is only 1.09M multiply-accumulation (MAC). Additionally, when implemented on a lightweight field programmable gate array (FPGA), the complete cough detection system only occupies 7.9K lookup tables (LUTs), 12.9K flip-flops (FFs), and 41 digital signal processing (DSP) slices, providing 8.3 GOP/s actual inference throughput and total power dissipation of 0.93 W. This framework meets the needs of partial application and can be easily extended or integrated into other healthcare applications.
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11
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Hamidi M, Zealouk O, Satori H, Laaidi N, Salek A. COVID-19 assessment using HMM cough recognition system. INTERNATIONAL JOURNAL OF INFORMATION TECHNOLOGY : AN OFFICIAL JOURNAL OF BHARATI VIDYAPEETH'S INSTITUTE OF COMPUTER APPLICATIONS AND MANAGEMENT 2023; 15:193-201. [PMID: 36313860 PMCID: PMC9595586 DOI: 10.1007/s41870-022-01120-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/30/2022] [Accepted: 10/13/2022] [Indexed: 11/06/2022]
Abstract
This paper is a part of our contributions to research on the ongoing COVID-19 pandemic around the world. This research aims to use Hidden Markov Model (HMM) based automatic speech recognition system to analyze the cough signal and determine whether the signal belongs to a sick or healthy speaker. We built a configurable model by using HMMs, Gaussian Mixture Models (GMMs), Mel frequency spectral coefficients (MFCCs) and a cough corpus collected from healthy and sick voluntary speakers. Our proposed method is able to classify dry cough with sensitivity from 85.86% to 91.57%, differentiate the dry cough, and cough COVID-19 symptom with specificity from 5 to 10%. The obtained results are very encouraging to enrich our corpus with more data and increase the performance of our diagnostic system.
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Affiliation(s)
- Mohamed Hamidi
- Advanced Systems Engineering Laboratory, ENSA-UIT, Kenitra, Morocco ,grid.412150.30000 0004 0648 5985Multimedia and Arts Department, FLLA, UIT, Kenitra, Morocco
| | - Ouissam Zealouk
- LISAC, Department of Mathematics and Computer Science, FSDM, USMBA, Fez, Morocco
| | - Hassan Satori
- LISAC, Department of Mathematics and Computer Science, FSDM, USMBA, Fez, Morocco
| | - Naouar Laaidi
- LISAC, Department of Mathematics and Computer Science, FSDM, USMBA, Fez, Morocco
| | - Amine Salek
- Faculty of Medicine and Pharmacy, UMP, Oujda, Morocco
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12
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Niranjan K, Shankar Kumar S, Vedanth S, Chitrakala DS. An Explainable AI driven Decision Support System for COVID-19 Diagnosis using Fused Classification and Segmentation. PROCEDIA COMPUTER SCIENCE 2023; 218:1915-1925. [PMID: 36743792 PMCID: PMC9886321 DOI: 10.1016/j.procs.2023.01.168] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
The coronavirus has caused havoc on billions of people worldwide. The Reverse Transcription Polymerase Chain Reaction(RT-PCR) test is widely accepted as a standard diagnostic tool for detecting infection, however, the severity of infection can't be measured accurately with RT-PCR results. Chest CT Scans of infected patients can manifest the presence of lesions with high sensitivity. During the pandemic, there is a dearth of competent doctors to examine chest CT images. Therefore, a Guided Gradcam based Explainable Classification and Segmentation system (GGECS) which is a real-time explainable classification and lesion identification decision support system is proposed in this work. The classification model used in the proposed GGECS system is inspired by Res2Net. Explainable AI techniques like GradCam and Guided GradCam are used to demystify Convolutional Neural Networks (CNNs). These explainable systems can assist in localizing the regions in the CT scan that contribute significantly to the system's prediction. The segmentation model can further reliably localize infected regions. The segmentation model is a fusion between the VGG-16 and the classification network. The proposed classification model in GGECS obtains an overall accuracy of 98.51 % and the segmentation model achieves an IoU score of 0.595.
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Affiliation(s)
- K Niranjan
- Computer Science and Engineering, College of Engineering Guindy, Anna University, Chennai, India
| | - S Shankar Kumar
- Computer Science and Engineering, College of Engineering Guindy, Anna University, Chennai, India
| | - S Vedanth
- Computer Science and Engineering, College of Engineering Guindy, Anna University, Chennai, India
| | - Dr. S. Chitrakala
- Computer Science and Engineering, College of Engineering Guindy, Anna University, Chennai, India
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13
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Cough Audio Analysis for COVID-19 Diagnosis. SN COMPUTER SCIENCE 2023; 4:125. [PMID: 36589771 PMCID: PMC9791965 DOI: 10.1007/s42979-022-01522-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/10/2022] [Accepted: 11/23/2022] [Indexed: 12/27/2022]
Abstract
Humanity has suffered catastrophically due to the COVID-19 pandemic. One of the most reliable diagnoses of COVID-19 is RT-PCR (reverse-transcription polymer chain reaction) testing. This method, however, has its limitations. It is time consuming and requires scalability. This research work carries out a preliminary prognosis of COVID-19, which is scalable and less time consuming. The research carried out a competitive analysis of four machine-learning models namely, Multilayer Perceptron, Convolutional Neural Networks, Recurrent Neural Networks with Long Short-Term Memory, and VGG-19 with Support Vector Machines. Out of these models, Multilayer Perceptron outperformed with higher specificity of 94.5% and accuracy of 96.8%. The results show that Multilayer Perceptron was able to distinguish between positive and negative COVID-19 coughs by a robust feature embedding technique.
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14
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Aleixandre JG, Elgendi M, Menon C. The Use of Audio Signals for Detecting COVID-19: A Systematic Review. SENSORS (BASEL, SWITZERLAND) 2022; 22:8114. [PMID: 36365811 PMCID: PMC9653621 DOI: 10.3390/s22218114] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Revised: 10/17/2022] [Accepted: 10/20/2022] [Indexed: 06/16/2023]
Abstract
A systematic review on the topic of automatic detection of COVID-19 using audio signals was performed. A total of 48 papers were obtained after screening 659 records identified in the PubMed, IEEE Xplore, Embase, and Google Scholar databases. The reviewed studies employ a mixture of open-access and self-collected datasets. Because COVID-19 has only recently been investigated, there is a limited amount of available data. Most of the data are crowdsourced, which motivated a detailed study of the various pre-processing techniques used by the reviewed studies. Although 13 of the 48 identified papers show promising results, several have been performed with small-scale datasets (<200). Among those papers, convolutional neural networks and support vector machine algorithms were the best-performing methods. The analysis of the extracted features showed that Mel-frequency cepstral coefficients and zero-crossing rate continue to be the most popular choices. Less common alternatives, such as non-linear features, have also been proven to be effective. The reported values for sensitivity range from 65.0% to 99.8% and those for accuracy from 59.0% to 99.8%.
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Affiliation(s)
- José Gómez Aleixandre
- Biomedical and Mobile Health Technology Lab, ETH Zurich, 8008 Zurich, Switzerland
- Department of Physics, ETH Zurich, 8093 Zurich, Switzerland
| | - Mohamed Elgendi
- Biomedical and Mobile Health Technology Lab, ETH Zurich, 8008 Zurich, Switzerland
| | - Carlo Menon
- Biomedical and Mobile Health Technology Lab, ETH Zurich, 8008 Zurich, Switzerland
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15
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Sunitha G, Arunachalam R, Abd‐Elnaby M, Eid MMA, Rashed ANZ. A comparative analysis of deep neural network architectures for the dynamic diagnosis of COVID-19 based on acoustic cough features. INTERNATIONAL JOURNAL OF IMAGING SYSTEMS AND TECHNOLOGY 2022; 32:1433-1446. [PMID: 35941929 PMCID: PMC9348187 DOI: 10.1002/ima.22749] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/19/2021] [Revised: 03/31/2022] [Accepted: 05/03/2022] [Indexed: 06/15/2023]
Abstract
The study aims to assess the detection performance of a rapid primary screening technique for COVID-19 that is purely based on the cough sound extracted from 2200 clinically validated samples using laboratory molecular testing (1100 COVID-19 negative and 1100 COVID-19 positive). Results and severity of samples based on quantitative RT-PCR (qRT-PCR), cycle threshold, and patient lymphocyte numbers were clinically labeled. Our suggested general methods consist of a tensor based on audio characteristics and deep-artificial neural network classification with deep cough convolutional layers, based on the dilated temporal convolution neural network (DTCN). DTCN has approximately 76% accuracy, 73.12% in TCN, and 72.11% in CNN-LSTM which have been trained at a learning rate of 0.2%, respectively. In our scenario, CNN-LSTM can no longer be employed for COVID-19 predictions, as they would generally offer questionable forecasts. In the previous stage, we discussed the exactness of the total cases of TCN, dilated TCN, and CNN-LSTM models which were truly predicted. Our proposed technique to identify COVID-19 can be considered as a robust and in-demand technique to rapidly detect the infection. We believe it can considerably hinder the COVID-19 pandemic worldwide.
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Affiliation(s)
- Gurram Sunitha
- Department of Computer Science EngineeringSree Vidyanikethan Engineering CollegeTirupatiAndhra PradeshIndia
| | - Rajesh Arunachalam
- Department of Electronics and Communication EngineeringCVR College of Engineering (Autonomous)HyderabadTelangana501510India
| | - Mohammed Abd‐Elnaby
- Department of Computer Engineering, College of Computers and Information TechnologyTaif UniversityP.O. Box 11099Taif 21944Saudi Arabia
| | - Mahmoud M. A. Eid
- Department of Electrical Engineering, College of EngineeringTaif UniversityP.O. Box 11099Taif 21944Saudi Arabia
| | - Ahmed Nabih Zaki Rashed
- Electronics and Electrical Communications Engineering DepartmentFaculty of Electronic Engineering, Menoufia UniversityMenoufEgypt
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16
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Heidari A, Jafari Navimipour N, Unal M, Toumaj S. Machine learning applications for COVID-19 outbreak management. Neural Comput Appl 2022; 34:15313-15348. [PMID: 35702664 PMCID: PMC9186489 DOI: 10.1007/s00521-022-07424-w] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2021] [Accepted: 05/10/2022] [Indexed: 12/29/2022]
Abstract
Recently, the COVID-19 epidemic has resulted in millions of deaths and has impacted practically every area of human life. Several machine learning (ML) approaches are employed in the medical field in many applications, including detecting and monitoring patients, notably in COVID-19 management. Different medical imaging systems, such as computed tomography (CT) and X-ray, offer ML an excellent platform for combating the pandemic. Because of this need, a significant quantity of study has been carried out; thus, in this work, we employed a systematic literature review (SLR) to cover all aspects of outcomes from related papers. Imaging methods, survival analysis, forecasting, economic and geographical issues, monitoring methods, medication development, and hybrid apps are the seven key uses of applications employed in the COVID-19 pandemic. Conventional neural networks (CNNs), long short-term memory networks (LSTM), recurrent neural networks (RNNs), generative adversarial networks (GANs), autoencoders, random forest, and other ML techniques are frequently used in such scenarios. Next, cutting-edge applications related to ML techniques for pandemic medical issues are discussed. Various problems and challenges linked with ML applications for this pandemic were reviewed. It is expected that additional research will be conducted in the upcoming to limit the spread and catastrophe management. According to the data, most papers are evaluated mainly on characteristics such as flexibility and accuracy, while other factors such as safety are overlooked. Also, Keras was the most often used library in the research studied, accounting for 24.4 percent of the time. Furthermore, medical imaging systems are employed for diagnostic reasons in 20.4 percent of applications.
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Affiliation(s)
- Arash Heidari
- Department of Computer Engineering, Tabriz Branch, Islamic Azad University, Tabriz, Iran
- Department of Computer Engineering, Shabestar Branch, Islamic Azad University, Shabestar, Iran
| | | | - Mehmet Unal
- Department of Computer Engineering, Nisantasi University, Istanbul, Turkey
| | - Shiva Toumaj
- Urmia University of Medical Sciences, Urmia, Iran
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17
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Clinical and Laboratory Approach to Diagnose COVID-19 Using Machine Learning. Interdiscip Sci 2022; 14:452-470. [PMID: 35133633 PMCID: PMC8846962 DOI: 10.1007/s12539-021-00499-4] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2021] [Revised: 12/17/2021] [Accepted: 12/23/2021] [Indexed: 12/18/2022]
Abstract
Coronavirus 2 (SARS-CoV-2), often known by the name COVID-19, is a type of acute respiratory syndrome that has had a significant influence on both economy and health infrastructure worldwide. This novel virus is diagnosed utilising a conventional method known as the RT-PCR (Reverse Transcription Polymerase Chain Reaction) test. This approach, however, produces a lot of false-negative and erroneous outcomes. According to recent studies, COVID-19 can also be diagnosed using X-rays, CT scans, blood tests and cough sounds. In this article, we use blood tests and machine learning to predict the diagnosis of this deadly virus. We also present an extensive review of various existing machine-learning applications that diagnose COVID-19 from clinical and laboratory markers. Four different classifiers along with a technique called Synthetic Minority Oversampling Technique (SMOTE) were used for classification. Shapley Additive Explanations (SHAP) method was utilized to calculate the gravity of each feature and it was found that eosinophils, monocytes, leukocytes and platelets were the most critical blood parameters that distinguished COVID-19 infection for our dataset. These classifiers can be utilized in conjunction with RT-PCR tests to improve sensitivity and in emergency situations such as a pandemic outbreak that might happen due to new strains of the virus. The positive results indicate the prospective use of an automated framework that could help clinicians and medical personnel diagnose and screen patients.
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18
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Hamdi S, Oussalah M, Moussaoui A, Saidi M. Attention-based hybrid CNN-LSTM and spectral data augmentation for COVID-19 diagnosis from cough sound. J Intell Inf Syst 2022; 59:367-389. [PMID: 35498369 PMCID: PMC9034264 DOI: 10.1007/s10844-022-00707-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2022] [Revised: 03/23/2022] [Accepted: 03/27/2022] [Indexed: 12/11/2022]
Abstract
COVID-19 pandemic has fueled the interest in artificial intelligence tools for quick diagnosis to limit virus spreading. Over 60% of people who are infected complain of a dry cough. Cough and other respiratory sounds were used to build diagnosis models in much recent research. We propose in this work, an augmentation pipeline which is applied on the pre-filtered data and uses i) pitch-shifting technique to augment the raw signal and, ii) spectral data augmentation technique SpecAugment to augment the computed mel-spectrograms. A deep learning based architecture that hybridizes convolution neural networks and long-short term memory with an attention mechanism is proposed for building the classification model. The feasibility of the proposed is demonstrated through a set of testing scenarios using the large-scale COUGHVID cough dataset and through a comparison with three baselines models. We have shown that our classification model achieved 91.13% of testing accuracy, 90.93% of sensitivity and an area under the curve of receiver operating characteristic of 91.13%.
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Affiliation(s)
- Skander Hamdi
- Department of Computer Science, University of Ferhat Abbes Setif, 19000 Setif, Algeria
| | - Mourad Oussalah
- Department of Computer Science and Engineering, University of Oulu, 90570 Oulu, Finland
| | - Abdelouahab Moussaoui
- Department of Computer Science, University of Ferhat Abbes Setif, 19000 Setif, Algeria
| | - Mohamed Saidi
- Department of Computer Science, University of Ferhat Abbes Setif, 19000 Setif, Algeria
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Anand S, Sharma V, Pourush R, Jaiswal S. A comprehensive survey on the biomedical signal processing methods for the detection of COVID-19. Ann Med Surg (Lond) 2022; 76:103519. [PMID: 35401978 PMCID: PMC8975609 DOI: 10.1016/j.amsu.2022.103519] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2022] [Revised: 03/09/2022] [Accepted: 03/26/2022] [Indexed: 12/16/2022] Open
Abstract
The novel coronavirus, renamed SARS-CoV-2 and most commonly referred to as COVID-19, has infected nearly 44.83 million people in 224 countries and has been designated SARS-CoV-2. In this study, we used 'web of Science', 'Scopus' and 'goggle scholar' with the keywords of "SARS-CoV-2 detection" or "coronavirus 2019 detection" or "COVID 2019 detection" or "COVID 19 detection" "corona virus techniques for detection of COVID-19", "audio techniques for detection of COVID-19", "speech techniques for detection of COVID-19", for period of 2019-2021. Some COVID-19 instances have an impact on speech production, which suggests that researchers should look for signs of disease detection in speech utilising audio and speech recognition signals from humans to better understand the condition. It is presented in this review that an overview of human audio signals is presented using an AI (Artificial Intelligence) model to diagnose, spread awareness, and monitor COVID-19, employing bio and non-obtrusive signals that communicated human speech and non-speech audio information is presented. Development of accurate and rapid screening techniques that permit testing at a reasonable cost is critical in the current COVID-19 pandemic crisis, according to the World Health Organization. In this context, certain existing investigations have shown potential in the detection of COVID 19 diagnostic signals from relevant auditory noises, which is a promising development. According to authors, it is not a single "perfect" COVID-19 test that is required, but rather a combination of rapid and affordable tests, non-clinic pre-screening tools, and tools from a variety of supply chains and technologies that will allow us to safely return to our normal lives while we await the completion of the hassle free COVID-19 vaccination process for all ages. This review was able to gather information on biomedical signal processing in the detection of speech, coughing sounds, and breathing signals for the purpose of diagnosing and screening the COVID-19 virus.
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Affiliation(s)
- Satyajit Anand
- Electronics and Communication Engineering, Mody University of Science and Technology, India
| | - Vikrant Sharma
- Mechanical Engineering, Mody University of Science and Technology, India
| | - Rajeev Pourush
- Electronics and Communication Engineering, Mody University of Science and Technology, India
| | - Sandeep Jaiswal
- Biomedical Engineering, Mody University of Science and Technology, India
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Detecting Bulbar Involvement in Patients with Amyotrophic Lateral Sclerosis Based on Phonatory and Time-Frequency Features. SENSORS 2022; 22:s22031137. [PMID: 35161881 PMCID: PMC8837974 DOI: 10.3390/s22031137] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/27/2021] [Revised: 01/20/2022] [Accepted: 01/28/2022] [Indexed: 12/10/2022]
Abstract
The term "bulbar involvement" is employed in ALS to refer to deterioration of motor neurons within the corticobulbar area of the brainstem, which results in speech and swallowing dysfunctions. One of the primary symptoms is a deterioration of the voice. Early detection is crucial for improving the quality of life and lifespan of ALS patients suffering from bulbar involvement. The main objective, and the principal contribution, of this research, was to design a new methodology, based on the phonatory-subsystem and time-frequency characteristics for detecting bulbar involvement automatically. This study focused on providing a set of 50 phonatory-subsystem and time-frequency features to detect this deficiency in males and females through the utterance of the five Spanish vowels. Multivariant Analysis of Variance was then used to select the statistically significant features, and the most common supervised classifications models were analyzed. A set of statistically significant features was obtained for males and females to capture this dysfunction. To date, the accuracy obtained (98.01% for females and 96.10% for males employing a random forest) outperformed the models in the literature. Adding time-frequency features to more classical phonatory-subsystem features increases the prediction capabilities of the machine-learning models for detecting bulbar involvement. Studying men and women separately gives greater success. The proposed method can be deployed in any kind of recording device (i.e., smartphone).
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21
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A Machine-Learning Model for Lung Age Forecasting by Analyzing Exhalations. SENSORS 2022; 22:s22031106. [PMID: 35161850 PMCID: PMC8838778 DOI: 10.3390/s22031106] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/29/2021] [Revised: 01/27/2022] [Accepted: 01/28/2022] [Indexed: 11/17/2022]
Abstract
Spirometers are important devices for following up patients with respiratory diseases. These are mainly located only at hospitals, with all the disadvantages that this can entail. This limits their use and consequently, the supervision of patients. Research efforts focus on providing digital alternatives to spirometers. Although less accurate, the authors claim they are cheaper and usable by many more people worldwide at any given time and place. In order to further popularize the use of spirometers even more, we are interested in also providing user-friendly lung-capacity metrics instead of the traditional-spirometry ones. The main objective, which is also the main contribution of this research, is to obtain a person’s lung age by analyzing the properties of their exhalation by means of a machine-learning method. To perform this study, 188 samples of blowing sounds were used. These were taken from 91 males (48.4%) and 97 females (51.6%) aged between 17 and 67. A total of 42 spirometer and frequency-like features, including gender, were used. Traditional machine-learning algorithms used in voice recognition applied to the most significant features were used. We found that the best classification algorithm was the Quadratic Linear Discriminant algorithm when no distinction was made between gender. By splitting the corpus into age groups of 5 consecutive years, accuracy, sensitivity and specificity of, respectively, 94.69%, 94.45% and 99.45% were found. Features in the audio of users’ expiration that allowed them to be classified by their corresponding lung age group of 5 years were successfully detected. Our methodology can become a reliable tool for use with mobile devices to detect lung abnormalities or diseases.
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On Comparing Cross-Validated Forecasting Models with a Novel Fuzzy-TOPSIS Metric: A COVID-19 Case Study. SUSTAINABILITY 2021. [DOI: 10.3390/su132413599] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Time series cross-validation is a technique to select forecasting models. Despite the sophistication of cross-validation over single test/training splits, traditional and independent metrics, such as Mean Absolute Error (MAE) and Root Mean Square Error (RMSE), are commonly used to assess the model’s accuracy. However, what if decision-makers have different models fitting expectations to each moment of a time series? What if the precision of the forecasted values is also important? This is the case of predicting COVID-19 in Amapá, a Brazilian state in the Amazon rainforest. Due to the lack of hospital capacities, a model that promptly and precisely responds to notable ups and downs in the number of cases may be more desired than average models that only have good performances in more frequent and calm circumstances. In line with this, this paper proposes a hybridization of the Technique for Order of Preference by Similarity to Ideal Solution (TOPSIS) and fuzzy sets to create a similarity metric, the closeness coefficient (CC), that enables relative comparisons of forecasting models under heterogeneous fitting expectations and also considers volatility in the predictions. We present a case study using three parametric and three machine learning models commonly used to forecast COVID-19 numbers. The results indicate that the introduced fuzzy similarity metric is a more informative performance assessment metric, especially when using time series cross-validation.
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