1
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Bharali MM, Santra A. Zinc tetrafluoroborate catalyzed α-stereoselective synthesis of pseudoglycals: efficient synthesis of digitoxin α-L-amicetose. Org Biomol Chem 2024; 22:8114-8118. [PMID: 39291776 DOI: 10.1039/d4ob01153h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/19/2024]
Abstract
We report here an efficient, fast, and cost-effective strategy for synthesizing pseudoglycals by the reaction of glycals with alcohols or nucleophiles using zinc tetrafluoroborate. This mild, transition metal-free approach allowed the α-selective synthesis of pseudoglycals using a wide range of acceptors containing various protecting groups/functionalities. This method is exemplified by the synthesis of digitoxin α-L-amicetose, a known potential cardiac glycoside anticancer agent. The improved 3-step synthesis from L-rhamnal afforded an overall yield of 54%, thus representing a significant improvement over the previous method.
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Affiliation(s)
- Mrinmoy Manash Bharali
- Department of Organic Synthesis and Process Chemistry, CSIR-Indian Institute of Chemical Technology, Uppal Road, Hyderabad-500007, India.
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad-201002, India
| | - Abhishek Santra
- Department of Organic Synthesis and Process Chemistry, CSIR-Indian Institute of Chemical Technology, Uppal Road, Hyderabad-500007, India.
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad-201002, India
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2
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Zhang Z, Wu R, Cao S, Li J, Huang G, Wang H, Yang T, Tang W, Xu P, Yu B. Merging total synthesis and NMR technology for deciphering the realistic structure of natural 2,6-dideoxyglycosides. SCIENCE ADVANCES 2024; 10:eadn1305. [PMID: 38608021 PMCID: PMC11014444 DOI: 10.1126/sciadv.adn1305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2023] [Accepted: 03/13/2024] [Indexed: 04/14/2024]
Abstract
The structural identification and efficient synthesis of bioactive 2,6-dideoxyglycosides are daunting challenges. Here, we report the total synthesis and structural revision of a series of 2,6-dideoxyglycosides from folk medicinal plants Ecdysanthera rosea and Chonemorpha megacalyx, which feature pregnane steroidal aglycones bearing an 18,20-lactone and glycans consisting of 2,6-dideoxy-3-O-methyl-β-pyranose residues, including ecdysosides A, B, and F and ecdysantheroside A. All the eight possible 2,6-dideoxy-3-O-methyl-β-pyranoside stereoisomers (of the proposed ecdysantheroside A) have been synthesized that testify the effective gold(I)-catalyzed glycosylation methods for the synthesis of various 2-deoxy-β-pyranosidic linkages and lays a foundation via nuclear magnetic resonance data mapping to identify these sugar units which occur promiscuously in the present and other natural glycosides. Moreover, some synthetic natural compounds and their isomers have shown promising anticancer, immunosuppressive, anti-inflammatory, and anti-Zika virus activities.
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Affiliation(s)
- Zhaolun Zhang
- State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Renjie Wu
- State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Shen Cao
- School of Chemistry and Materials Science, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, 1 Sub-lane Xiangshan, Hangzhou 310024, China
| | - Jiaji Li
- State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Guangen Huang
- School of Chinese Materia Medica, Nanjing University of Chinese Medicine, Nanjing 210023, China
- State Key Laboratory of Chemical Biology, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China
| | - Haoyu Wang
- University of Chinese Academy of Sciences, Beijing 100049, China
- State Key Laboratory of Chemical Biology, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China
| | - Tao Yang
- University of Chinese Academy of Sciences, Beijing 100049, China
- State Key Laboratory of Chemical Biology, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China
| | - Wei Tang
- University of Chinese Academy of Sciences, Beijing 100049, China
- State Key Laboratory of Chemical Biology, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China
| | - Peng Xu
- State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032, China
- University of Chinese Academy of Sciences, Beijing 100049, China
- School of Chemistry and Materials Science, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, 1 Sub-lane Xiangshan, Hangzhou 310024, China
| | - Biao Yu
- State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 200032, China
- University of Chinese Academy of Sciences, Beijing 100049, China
- School of Chemistry and Materials Science, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, 1 Sub-lane Xiangshan, Hangzhou 310024, China
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3
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Jiao Q, Guo Z, Zheng M, Lin W, Liao Y, Yan W, Liu T, Xu C. Anion-Bridged Dual Hydrogen Bond Enabled Concerted Addition of Phenol to Glycal. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024; 11:e2308513. [PMID: 38225720 PMCID: PMC10953558 DOI: 10.1002/advs.202308513] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2023] [Revised: 12/18/2023] [Indexed: 01/17/2024]
Abstract
A noncovalent organocatalytic concerted addition of phenol to glycal is developed for the stereoselective and regioselective construction of biologically important phenolic 2-deoxyglycosides, featuring wide substrate tolerance. The method relies on an anion-bridged dual hydrogen bond interaction which is experimentally proved by Nuclear Magnetic Resonance (NMR), Ultraviolet and visible (UV-vis), and fluorescence analysis. Experimental evidence including kinetic analysis, Kinetic Isotope Effect (KIE) studies, linear free energy relationship, Hammett plot, and density functional theory (DFT) calculations is provided for a concerted mechanism where a high-energy oxocarbenium ion is not formed. In addition, the potential utility of this method is further demonstrated by the synthesis of biologically active glycosylated flavones. The benchmarking studies demonstrate significant advances in this newly developed method compared to previous approaches.
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Affiliation(s)
- Qinbo Jiao
- Institute of Pharmaceutical Science and TechnologyCollege of ChemistryFuzhou UniversityFuzhou350108China
| | - Zhenbo Guo
- State Key Laboratory of Elemento‐organic ChemistryCollege of ChemistryNankai UniversityWeijin Road No. 94Tianjin300071China
- Haihe Laboratory of Sustainable Chemical TransformationsTianjin300192China
| | - Mingwen Zheng
- Institute of Pharmaceutical Science and TechnologyCollege of ChemistryFuzhou UniversityFuzhou350108China
| | - Wentao Lin
- Institute of Pharmaceutical Science and TechnologyCollege of ChemistryFuzhou UniversityFuzhou350108China
| | - Yujie Liao
- Institute of Pharmaceutical Science and TechnologyCollege of ChemistryFuzhou UniversityFuzhou350108China
| | - Weitao Yan
- Institute of Pharmaceutical Science and TechnologyCollege of ChemistryFuzhou UniversityFuzhou350108China
| | - Tianfei Liu
- State Key Laboratory of Elemento‐organic ChemistryCollege of ChemistryNankai UniversityWeijin Road No. 94Tianjin300071China
| | - Chunfa Xu
- Institute of Pharmaceutical Science and TechnologyCollege of ChemistryFuzhou UniversityFuzhou350108China
- Key Laboratory of Organofluorine ChemistryShanghai Institute of Organic ChemistryChinese Academy of SciencesShanghai200032China
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4
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Li G, Noguchi M, Ishihara M, Takagi Y, Nagaki M, Saito S, Saito M, Ye XS, Shoda SI. Stereoselective protecting-group-free synthesis of alkyl glycosides using dibenzyloxy triazine type glycosyl donors. Carbohydr Res 2023; 534:108940. [PMID: 37738819 DOI: 10.1016/j.carres.2023.108940] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2023] [Revised: 09/04/2023] [Accepted: 09/11/2023] [Indexed: 09/24/2023]
Abstract
Chemical O-glycosylation is a key step for the synthesis of sugar-containing molecules such as glycolipids. However, traditional carbohydrate chemistry is characterized by extensive use of protective groups, resulting in laborious manipulations and poor atom economy. Here, we present a protecting-group-free glycosylation strategy employing dibenzyloxy-1,3,5-triazin-2-yl glycosides (DBT-glycosides) as glycosyl donors. The DBT-glycosyl donors could be prepared directly through an alkaline nucleophilic substitution from unprotected sugars in aqueous media. The O-glycosylation of alcohols by using DBT-glycosyl donors has been carried out under mild hydrogenolytic conditions, affording the corresponding alkyl glycosides stereo-selectively in good yields.
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Affiliation(s)
- Gefei Li
- College of Science, Nanjing Forestry University, Long Pan Road No.159, Nanjing, 210037, PR China; Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-07, Aoba, Aoba-ku, Sendai, 980-8579, Japan; State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, PR China
| | - Masato Noguchi
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-07, Aoba, Aoba-ku, Sendai, 980-8579, Japan
| | - Masaki Ishihara
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-07, Aoba, Aoba-ku, Sendai, 980-8579, Japan
| | - Yuka Takagi
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-07, Aoba, Aoba-ku, Sendai, 980-8579, Japan
| | - Marina Nagaki
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-07, Aoba, Aoba-ku, Sendai, 980-8579, Japan
| | - Sachie Saito
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-07, Aoba, Aoba-ku, Sendai, 980-8579, Japan
| | - Masashi Saito
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-07, Aoba, Aoba-ku, Sendai, 980-8579, Japan
| | - Xin-Shan Ye
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, PR China.
| | - Shin-Ichiro Shoda
- Department of Biomolecular Engineering, Graduate School of Engineering, Tohoku University, 6-6-07, Aoba, Aoba-ku, Sendai, 980-8579, Japan.
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5
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Haisha S, Nguyen HM, Schlegel HB. Stereoselective glycosylation reactions with 2-deoxyglucose: a computational study of some catalysts. COMPUT THEOR CHEM 2023; 1224:114122. [PMID: 37214423 PMCID: PMC10195097 DOI: 10.1016/j.comptc.2023.114122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/09/2023]
Abstract
2-Deoxy glycosides are important components of many oligosaccharides with antibiotic and anti-cancer activity, but their synthesis can be very challenging. Phenanthrolines and substituted pyridines promote stereoselective glycosylation of 1-bromo sugars via a double SN2 mechanism. Pyridine reacting with α-bromo, 2-deoxyglucose was chosen to model this reaction. The first step involves displacement of bromide by pyridine which can be rate limiting because bromide ion is poorly solvated in the non-polar solvents used for these reactions. We examined a series of small molecules to bind bromide and stabilize this transition state. Geometry optimization and vibrational frequencies were calculated using M06-2X/6-31+G(d,p) and SMD implicit solvation for diethyl ether. More accurate energies were obtained with M06-2X/aug-cc-pVTZ and implicit solvation. Urea, thiourea, guanidine and cyanoguanidine bind bromide more strongly than alkylamines, (NH2CH2CH2)nNH3-n. Compared to the uncatalyzed reaction, urea, thiourea and cyanoguanidine lower the free energy of the transition state by 3 kcal/mol while guanidine lowers the barrier by 2 kcal/mol.
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Affiliation(s)
- Spencer Haisha
- Department of Biology, Wayne State University, Detroit, Michigan 48202, United States
| | - Hien M Nguyen
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
| | - H Bernhard Schlegel
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, United States
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6
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Bhardwaj M, Mukherjee D. Regio and Stereoselective One-Pot Synthesis of 2-Deoxy-3-thio Pyranoses and Their O-Glycosides from Glycals. J Org Chem 2023; 88:5676-5686. [PMID: 37083468 DOI: 10.1021/acs.joc.3c00146] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/22/2023]
Abstract
A reaction of glycals with two different types of nucleophiles in the presence of SnCl4 enabled one-pot rapid access to 2-deoxy-3-thio pyranoses and their O-glycosides. The process involves thioaryl substitution at C-3 with stereoretention and α-selective O-glycosylation at C-1 from d-glycals, thus combining two reactions with three interventions. The present methodology features an attractive three-component coupling (1:1.2:1.5 ratio) with operational simplicity at 0 °C in 10-20 min. This stereoselective one-pot 1,3-difunctionalization approach of glycals is compatible with wide range of primary and secondary alcohols affording products in good to excellent yields. This methodology was successfully extended toward disaccharide synthesis. Several control experiments suggested a plausible reaction mechanism and rationale behind regio and stereoselectivity. The reaction strategy possesses an intrinsic ability for the synthesis of various natural products and drug molecules.
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Affiliation(s)
- Monika Bhardwaj
- Natural Product and Medicinal Chemistry Division, Indian Institute of Integrative Medicine (CSIR-IIIM), Canal Road, Jammu 180001, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
| | - Debaraj Mukherjee
- Natural Product and Medicinal Chemistry Division, Indian Institute of Integrative Medicine (CSIR-IIIM), Canal Road, Jammu 180001, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
- Department of Chemistry, BOSE Institute, Kolkata 700054, India
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7
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Geulin A, Bourne-Branchu Y, Ben Ayed K, Lecourt T, Joosten A. Ferrier/Aza-Wacker/Epoxidation/Glycosylation (FAWEG) Sequence to Access 1,2-Trans 3-Amino-3-deoxyglycosides. Chemistry 2023; 29:e202203987. [PMID: 36793144 DOI: 10.1002/chem.202203987] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2022] [Indexed: 02/17/2023]
Abstract
3-Amino-3-deoxyglycosides constitute an essential class of nitrogen-containing sugars. Among them, many important 3-amino-3-deoxyglycosides possess a 1,2-trans relationship. In view of their numerous biological applications, the synthesis of 3-amino-3-deoxyglycosyl donors giving rise to a 1,2-trans glycosidic linkage is thus an important challenge. Even though glycals are highly polyvalent donors, the synthesis and reactivity of 3-amino-3-deoxyglycals have been little studied. In this work, we describe a new sequence, involving a Ferrier rearrangement and subsequent aza-Wacker cyclization that allows the rapid synthesis of orthogonally protected 3-amino-3-deoxyglycals. Finally a 3-amino-3-deoxygalactal derivative was submitted for the first time to an epoxidation/glycosylation with high yield and great diastereoselectivity, highlighting FAWEG (Ferrier/Aza-Wacker/Epoxidation/Glycosylation) as a new approach to access 1,2-trans 3-amino-3-deoxyglycosides.
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Affiliation(s)
- Anselme Geulin
- Normandie Univ, INSA Rouen, UNIROUEN, CNRS, COBRA UMR 6014, 76000, Rouen, France
- 24 Rue Lucien Tesnière, 76130, Mont-Saint-Aignan, France
| | - Yann Bourne-Branchu
- Normandie Univ, INSA Rouen, UNIROUEN, CNRS, COBRA UMR 6014, 76000, Rouen, France
- 24 Rue Lucien Tesnière, 76130, Mont-Saint-Aignan, France
| | - Kawther Ben Ayed
- Normandie Univ, INSA Rouen, UNIROUEN, CNRS, COBRA UMR 6014, 76000, Rouen, France
- 24 Rue Lucien Tesnière, 76130, Mont-Saint-Aignan, France
| | - Thomas Lecourt
- Normandie Univ, INSA Rouen, UNIROUEN, CNRS, COBRA UMR 6014, 76000, Rouen, France
- 24 Rue Lucien Tesnière, 76130, Mont-Saint-Aignan, France
| | - Antoine Joosten
- Normandie Univ, INSA Rouen, UNIROUEN, CNRS, COBRA UMR 6014, 76000, Rouen, France
- 24 Rue Lucien Tesnière, 76130, Mont-Saint-Aignan, France
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8
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Mukherji A, Rotta MKV, Sarmah BK, Kancharla PK. Influence of Various Silyl Protecting Groups on Stereoselective 2-Deoxyrhamnosylation. J Org Chem 2023; 88:245-260. [PMID: 36524596 DOI: 10.1021/acs.joc.2c02285] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
The influence of various silyl protecting groups on 2-deoxyrhamnosylation using 2-deoxyrhamnosyl acetates, thioglycosides, and (p-methoxyphenyl)vinylbenzoate (PMPVB) donors has been presented. C-Glycosylation reactions reveal that tert-butyldimethylsilyl (TBDMS), triisopropylsilyl (TIPS), and tert-butyldiphenylsilyl (TBDPS) silyl protected rhamnosyl oxocarbenium ions have no facial selectivity except for the conformationally (4H3) locked tetraisopropyldisiloxane (TIPDS) protected rhamnose donor, which provides complete α-selectivity. However, TBDPS protected rhamnosyl donors are found to be superior protecting groups for α-stereoselective O-glycosylation reactions with various acceptors. The observed results are found consistent across donors and donor activation conditions. Most importantly, the study was conducted at room temperature unlike the other energy-intensive low-temperature studies and was bound to have more practical utility. The outcomes have been explained using kinetic and thermodynamic analyses.
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Affiliation(s)
- Ananya Mukherji
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati, Assam 781039, India
| | - Mahendra K V Rotta
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati, Assam 781039, India
| | - Bikash K Sarmah
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati, Assam 781039, India
| | - Pavan K Kancharla
- Department of Chemistry, Indian Institute of Technology Guwahati, Guwahati, Assam 781039, India
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9
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Trocka A, Szwarc-Karabyka K, Makowiec S, Laskowski T. Application of the 2-deoxyglucose scaffold as a new chiral probe for elucidation of the absolute configuration of secondary alcohols. Sci Rep 2022; 12:16838. [PMID: 36207399 PMCID: PMC9547072 DOI: 10.1038/s41598-022-21174-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2022] [Accepted: 09/23/2022] [Indexed: 11/11/2022] Open
Abstract
Herein, we present the application of 2-deoxy-D-glucose derivatives as chiral probes for elucidation of the absolute configuration of chiral secondary alcohols. The probes are attached to the studied molecules via glycosylation reaction and the resulting products are examined by a set of standard 2D NMR experiments. The absolute configuration of an oxymethine carbon atom binding the probe is established on a basis of a set of diagnostic dipolar couplings (NOEs/ROEs). These correlations may be considered diagnostic due to a pronounced lack of conformational freedom of the formed glycosidic linkage. While the chance for an observation of the diagnostic signals is the highest when the resulting glycoside in an α-anomer. 2-deoxy-D-glucose was selected as a probe of choice since is it known to strongly prefer the formation of α-glycosides.
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Affiliation(s)
- Alicja Trocka
- Department of Organic Chemistry, Faculty of Chemistry, Gdańsk University of Technology, Narutowicza Street 11/12, 80-233, Gdańsk, Poland.
| | - Katarzyna Szwarc-Karabyka
- Nuclear Magnetic Resonance Laboratory, Faculty of Chemistry, Gdańsk University of Technology, Narutowicza Street 11/12, 80-233, Gdańsk, Poland
| | - Sławomir Makowiec
- Department of Organic Chemistry, Faculty of Chemistry, Gdańsk University of Technology, Narutowicza Street 11/12, 80-233, Gdańsk, Poland
| | - Tomasz Laskowski
- Department of Pharmaceutical Technology and Biochemistry and BioTechMed Centre, Faculty of Chemistry, Gdańsk University of Technology, Narutowicza Street 11/12, 80-233, Gdańsk, Poland
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10
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Liu X, Lin Y, Peng W, Zhang Z, Gao L, Zhou Y, Song Z, Wang Y, Xu P, Yu B, Sun H, Xie W, Li W. Direct Synthesis of 2,6-Dideoxy-β-glycosides and β-Rhamnosides with a Stereodirecting 2-(Diphenylphosphinoyl)acetyl Group. Angew Chem Int Ed Engl 2022; 61:e202206128. [PMID: 35695834 DOI: 10.1002/anie.202206128] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Indexed: 12/11/2022]
Abstract
Anomeric stereocontrol is usually one of the major issues in the synthesis of complex carbohydrates, particularly those involving β-configured 2,6-dideoxyglycoside and d/l-rhamnoside moieties. Herein, we report that 2-(diphenylphosphinoyl)acetyl is highly effective as a remote stereodirecting group in the direct synthesis of these challenging β-glycosides under mild conditions. A deoxy-trisaccharide as a mimic of the sugar chain of landomycin E was prepared stereospecifically in high yield. The synthetic potential was also highlighted in the synthesis of Citrobacter freundii O-antigens composed of a [→4)-α-d-Manp-(1→3)-β-d-Rhap(1→4)-β-d-Rhap-(1→] repeating unit, wherein the convergent assembly up to a nonasaccharide was realized with a strongly β-directing trisaccharide donor. Variable-temperature NMR studies indicate the presence of intermolecular H-bonding between the donor and the bulky acceptor as direct spectral evidence in support of the concept of hydrogen-bond-mediated aglycone delivery.
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Affiliation(s)
- Xianglai Liu
- Department of Medicinal Chemistry, School of Pharmacy, China Pharmaceutical University, 639 Longmian Avenue, Nanjing, Jiangsu 211198, China
| | - Yetong Lin
- Department of Medicinal Chemistry, School of Pharmacy, China Pharmaceutical University, 639 Longmian Avenue, Nanjing, Jiangsu 211198, China
| | - Wenyi Peng
- Department of Medicinal Chemistry, School of Pharmacy, China Pharmaceutical University, 639 Longmian Avenue, Nanjing, Jiangsu 211198, China
| | - Zhaolun Zhang
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai, 200032, China
| | - Longwei Gao
- Department of Medicinal Chemistry, School of Pharmacy, China Pharmaceutical University, 639 Longmian Avenue, Nanjing, Jiangsu 211198, China
| | - Yueer Zhou
- Department of Medicinal Chemistry, School of Pharmacy, China Pharmaceutical University, 639 Longmian Avenue, Nanjing, Jiangsu 211198, China
| | - Zhe Song
- Instrumental Analysis Center, China Pharmaceutical University, 24 Tong Jia Xiang, Nanjing, Jiangsu 210009, China
| | - Yingjie Wang
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai, 200032, China
| | - Peng Xu
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai, 200032, China
| | - Biao Yu
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road, Shanghai, 200032, China
| | - Haopeng Sun
- Department of Medicinal Chemistry, School of Pharmacy, China Pharmaceutical University, 639 Longmian Avenue, Nanjing, Jiangsu 211198, China
| | - Weijia Xie
- Department of Medicinal Chemistry, School of Pharmacy, China Pharmaceutical University, 639 Longmian Avenue, Nanjing, Jiangsu 211198, China
| | - Wei Li
- Department of Medicinal Chemistry, School of Pharmacy, China Pharmaceutical University, 639 Longmian Avenue, Nanjing, Jiangsu 211198, China
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11
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Debenzylation of Benzyl-Protected Methylcellulose. POLYSACCHARIDES 2022. [DOI: 10.3390/polysaccharides3030028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Methyl cellulose and its derivatives are widely used in the food industry, cosmetics, and as construction materials. The properties of methyl celluloses (MC) strongly depend on their degrees and positions of substitution. In order to generate MCs with uncommon blocky substitution, we apply fully protected O-benzyl-O-methyl celluloses (BnMC). Such complex polysaccharide derivatives could not be deprotected completely and without shift of the composition by methods usually applied to mono- and oligosaccharides. Therefore, a facile debenzylation method was developed based on photo-initiated free-radical bromination in the presence of hydrobromic acid scavengers followed by alkaline treatment. The reaction proceeds under homogeneous conditions and without the aid of any catalyst. There is no need for expensive equipment, materials, anhydrous reagents, or running the reaction under anhydrous conditions. Reaction parameters were investigated and optimized for successful debenzylation of completely protected BnMC with degrees of methyl substitution (DSMe) around 1.9 (and DSBn around 1.1). Side-product-free and almost complete debenzylation was achieved when 1,2-epoxybutane (0.5 eq./eq. N-bromosuccinimide) and 2,6-di-tert-butylpyridine (0.5 eq./eq. N-bromosuccinimide) were used in the reaction. Furthermore, ATR-IR and 1H NMR spectroscopy confirmed the successful removal of benzyl ether groups. The method was developed to monitor the transglycosylation reaction of the BnMC with permethylated cellulose, for which the deprotection of many small samples in parallel is required. This comprises the determination of the methyl pattern in the glucosyl units by gas-liquid chromatography (GLC), as well as oligosaccharide analysis by liquid chromatography mass spectrometry (LC-MS) after perdeuteromethylation and partial hydrolysis to determine the methyl pattern in the chains. The unavoidable partial chain degradation during debenzylation does not interfere with this analytical application, but, most importantly, the DS and the methyl pattern were almost congruent for the debenzylated product and the original MC, indicating the full success of this approach The presented method provides an unprecedented opportunity for high throughput and parallel debenzylation of complicated glucans, such as BnMC (as a model compound), for analytical purposes. For comparison, debenzylation using Na/NH3 was applied to BnMC and resulted in a completely debenzylated product with a remarkably high recovery yield of 99 mol% and is, thus, the method of choice for synthetic applications, e.g., for the transglycosylation product prepared under the selected conditions in a preparative scale.
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12
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Mukherjee MM, Ghosh R, Hanover JA. Recent Advances in Stereoselective Chemical O-Glycosylation Reactions. Front Mol Biosci 2022; 9:896187. [PMID: 35775080 PMCID: PMC9237389 DOI: 10.3389/fmolb.2022.896187] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Accepted: 04/21/2022] [Indexed: 12/26/2022] Open
Abstract
Carbohydrates involving glycoconjugates play a pivotal role in many life processes. Better understanding toward glycobiological events including the structure–function relationship of these biomolecules and for diagnostic and therapeutic purposes including tailor-made vaccine development and synthesis of structurally well-defined oligosaccharides (OS) become important. Efficient chemical glycosylation in high yield and stereoselectivity is however challenging and depends on the fine tuning of a protection profile to get matching glycosyl donor–acceptor reactivity along with proper use of other important external factors like catalyst, solvent, temperature, activator, and additive. So far, many glycosylation methods have been reported including several reviews also. In the present review, we will concentrate our discussion on the recent trend on α- and β-selective glycosylation reactions reported during the past decade.
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Affiliation(s)
- Mana Mohan Mukherjee
- Laboratory of Cell and Molecular Biology, NIDDK, National Institutes of Health, Bethesda, MD, United States
| | - Rina Ghosh
- Department of Chemistry, Jadavpur University, Kolkata, India
- *Correspondence: John A. Hanover, ; Rina Ghosh,
| | - John A. Hanover
- Laboratory of Cell and Molecular Biology, NIDDK, National Institutes of Health, Bethesda, MD, United States
- *Correspondence: John A. Hanover, ; Rina Ghosh,
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13
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Liu X, Lin Y, Peng W, Zhang Z, Gao L, Zhou Y, Song Z, Wang Y, Xu P, Yu B, Sun H, Xie W, Li W. Direct Synthesis of 2,6‐Dideoxy‐β‐glycosides and β‐Rhamnosides with a Stereodirecting 2‐(Diphenylphosphinoyl)acetyl Group. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202206128] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Xianglai Liu
- China Pharmaceutical University School of Pharmacy Department of Medicinal Chemistry CHINA
| | - Yetong Lin
- China Pharmaceutical University School of Pharmacy Department of Medicinal Chemistry CHINA
| | - Wenyi Peng
- China Pharmaceutical University School of Pharmacy Department of Medicinal Chemistry CHINA
| | - Zhaolun Zhang
- Shanghai Institute of Organic Chemistry State Key Laboratory of Bioorganic and Natural Products Chemistry CHINA
| | - Longwei Gao
- China Pharmaceutical University School of Pharmacy Department of Medicinal Chemistry CHINA
| | - Yueer Zhou
- China Pharmaceutical University School of Pharmacy Department of Medicinal Chemistry CHINA
| | - Zhe Song
- China Pharmaceutical University Instrumental Analysis Center CHINA
| | - Yingjie Wang
- Shanghai Institute of Organic Chemistry State Key Laboratory of Bioorganic and Natural Products Chemistry CHINA
| | - Peng Xu
- Shanghai Institute of Organic Chemistry State Key Laboratory of Bioorganic and Natural Products Chemistry CHINA
| | - Biao Yu
- Shanghai Institute of Organic Chemistry State Key Laboratory of Bioorganic and Natural Products Chemistry CHINA
| | - Haopeng Sun
- China Pharmaceutical University School of Pharmacy Department of Medicinal Chemistry CHINA
| | - Weijia Xie
- China Pharmaceutical University School of Pharmacy Department of Medicinal Chemistry CHINA
| | - Wei Li
- China Pharmaceutical University School of Pharmacy Department of Medicinal Chemistry 639 Longmian Avenue 211198 Nanjing CHINA
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14
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Mizia JC, Syed MU, Bennett CS. Synthesis of the α-Linked Digitoxose Trisaccharide Fragment of Kijanimicin: An Unexpected Application of Glycosyl Sulfonates. Org Lett 2022; 24:731-735. [PMID: 35005969 DOI: 10.1021/acs.orglett.1c04190] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Previously, we demonstrated that glycosyl tosylates are effective for the synthesis of β-glycosides of gluco-configured 2-deoxy sugars. Here, we show the same sulfonate system can be used for the selective synthesis of α-glycosides containing the allo-configured 2-deoxy sugar digitoxose. As with previous work, optimal selectivity is obtained through matching the donor with the appropriate arylsulfonyl chloride promoter. The utility of this method is demonstrated through the synthesis of the α-linked digitoxose trisaccharide fragment of kijanimicin.
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Affiliation(s)
- J Colin Mizia
- Department of Chemistry, Tufts University, Medford, Massachusetts 02155, United States
| | - Mohammed U Syed
- Department of Chemistry, Tufts University, Medford, Massachusetts 02155, United States
| | - Clay S Bennett
- Department of Chemistry, Tufts University, Medford, Massachusetts 02155, United States
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15
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Javed, Tiwari A, Azeem Z, Mandal PK. 4,5-Dioxo-imidazolinium Cation-Promoted α-Selective Dehydrative Glycosylation of 2-Deoxy- and 2,6-Dideoxy Sugars. J Org Chem 2022; 87:3718-3729. [DOI: 10.1021/acs.joc.1c02650] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Javed
- Medicinal and Process Chemistry Division, CSIR-Central Drug Research Institute, BS-10/1, Sector 10, Jankipuram Extension, Sitapur Road, P.O. Box 173, Lucknow, 226031, India
| | - Ashwani Tiwari
- Medicinal and Process Chemistry Division, CSIR-Central Drug Research Institute, BS-10/1, Sector 10, Jankipuram Extension, Sitapur Road, P.O. Box 173, Lucknow, 226031, India
| | - Zanjila Azeem
- Medicinal and Process Chemistry Division, CSIR-Central Drug Research Institute, BS-10/1, Sector 10, Jankipuram Extension, Sitapur Road, P.O. Box 173, Lucknow, 226031, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
| | - Pintu Kumar Mandal
- Medicinal and Process Chemistry Division, CSIR-Central Drug Research Institute, BS-10/1, Sector 10, Jankipuram Extension, Sitapur Road, P.O. Box 173, Lucknow, 226031, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
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16
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Marino C, Bordoni AV. Deoxy sugars. General methods for carbohydrate deoxygenation and glycosidation. Org Biomol Chem 2022; 20:934-962. [PMID: 35014646 DOI: 10.1039/d1ob02001c] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Deoxy sugars represent an important class of carbohydrates, present in a large number of biomolecules involved in multiple biological processes. In various antibiotics, antimicrobials, and therapeutic agents the presence of deoxygenated units has been recognized as responsible for biological roles, such as adhesion or great affinity to receptors, or improved efficacy. The characterization of glycosidases and glycosyltranferases requires substrates, inhibitors and analogous compounds. Deoxygenated sugars are useful for carrying out specific studies for these enzymes. Deoxy sugars, analogs of natural substrates, may behave as substrates or inhibitors, or may not interact with the enzyme. They are also important for glycodiversification studies of bioactive natural products and glycobiological processes, which could contribute to discovering new therapeutic agents with greater efficacy by modification or replacement of sugar units. Deoxygenation of carbohydrates is, thus, of great interest and numerous efforts have been dedicated to the development of methods for the reduction of sugar hydroxyl groups. Given that carbohydrates are the most important renewable chemicals and are more oxidized than fossil raw materials, it is also important to have methods to selectively remove oxygen from certain atoms of these renewable raw materials. The different methods for removal of OH groups of carbohydrates and representative or recent applications of them are presented in this chapter. Glycosidic bonds in general, and 2-deoxy glycosidic linkages, are included. It is not the scope of this survey to cover all reports for each specific technique.
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Affiliation(s)
- Carla Marino
- CIHIDECAR, Departamento de Química Orgánica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Pabellón II, Ciudad Universitaria, 1428 Buenos Aires, Argentina.
| | - Andrea V Bordoni
- Gerencia Química & Instituto de Nanociencia y Nanotecnología - Centro Atómico Constituyentes, Comisión Nacional de Energía Atómica, CONICET, Av. Gral. Paz 1499, B1650KNA San Martín, Buenos Aires, Argentina
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17
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Halder S, Addanki RB, Sarmah BK, Kancharla PK. Catalytic Stereoselective Synthesis of 2-Deoxy α-glycosides Using Glycosyl Ortho-[1-(p-MeOPhenyl)Vinyl]Benzoates (PMPVB) Donors. Org Biomol Chem 2022; 20:1874-1878. [DOI: 10.1039/d1ob02502c] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
2-Deoxy Glycosyl Ortho-[1-(p-MeOPhenyl)Vinyl]Benzoates (PMPVB) donors have been presented as stable, reactive glycosyl donors for the synthesis of 2-deoxy α-glycosides. The donors react under Brønsted acid conditions to provide the 2-deoxy-α-glycosides...
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18
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Liu X, Lin Y, Liu A, Sun Q, Sun H, Xu P, Li G, Song Y, Xie W, Sun H, Yu B, Li W. 2‐Diphenylphosphinonyl
‐acetyl as a Remote Directing Group for the Highly Stereoselective Synthesis of
β‐Glycosides. CHINESE J CHEM 2021. [DOI: 10.1002/cjoc.202100865] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Xianglai Liu
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Yetong Lin
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Ao Liu
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Qianhui Sun
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Huiyong Sun
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Peng Xu
- State Key Laboratory of Bioorganic and Natural Products Chemistry Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road Shanghai 200032 China
| | - Guolong Li
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Yingying Song
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Weijia Xie
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Haopeng Sun
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
| | - Biao Yu
- State Key Laboratory of Bioorganic and Natural Products Chemistry Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 345 Lingling Road Shanghai 200032 China
| | - Wei Li
- Department of Medicinal Chemistry School of Pharmacy China Pharmaceutical University, 639 Longmian Avenue Nanjing Jiangsu 211198 China
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19
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Yang S, Chen C, Chen J, Li C. Total Synthesis of the Potent and Broad-Spectrum Antibiotics Amycolamicin and Kibdelomycin. J Am Chem Soc 2021; 143:21258-21263. [PMID: 34879199 DOI: 10.1021/jacs.1c11477] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
The complex and intriguing structures of the antibiotics amycolamicin and kibdelomycin are herein confirmed through total synthesis. Careful titration of the synthetic products reveals that kibdelomycin is the salt form of amycolamicin. This synthesis employs a highly convergent strategy, which provides a modular approach for further SAR studies of this class of antibiotics.
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Affiliation(s)
- Shaoqiang Yang
- National Institute of Biological Sciences, Beijing, 102206, China
| | - Chenglong Chen
- National Institute of Biological Sciences, Beijing, 102206, China
| | - Jie Chen
- National Institute of Biological Sciences, Beijing, 102206, China.,Tsinghua Institute of Multidisciplinary Biomedical Research, Tsinghua University, Beijing, 100084, China
| | - Chao Li
- National Institute of Biological Sciences, Beijing, 102206, China.,Tsinghua Institute of Multidisciplinary Biomedical Research, Tsinghua University, Beijing, 100084, China
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20
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Żurawska K, Stokowy M, Kapica P, Olesiejuk M, Kudelko A, Papaj K, Skonieczna M, Szeja W, Walczak K, Kasprzycka A. Synthesis and Preliminary Anticancer Activity Assessment of N-Glycosides of 2-Amino-1,3,4-thiadiazoles. Molecules 2021; 26:7245. [PMID: 34885815 PMCID: PMC8659227 DOI: 10.3390/molecules26237245] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2021] [Revised: 11/24/2021] [Accepted: 11/25/2021] [Indexed: 02/06/2023] Open
Abstract
The addition of 2-amino-1,3,4-thiadiazole derivatives with parallel iodination of differently protected glycals has been achieved using a double molar excess of molecular iodine under mild conditions. The corresponding thiadiazole derivatives of N-glycosides were obtained in good yields and anomeric selectivity. The usage of iodine as a catalyst makes this method easy, inexpensive, and successfully useable in reactions with sugars. Thiadiazole derivatives were tested in a panel of three tumor cell lines, MCF-7, HCT116, and HeLa. These compounds initiated biological response in investigated tumor models in a different rate. The MCF-7 is resistant to the tested compounds, and the cytometry assay indicated low increase in cell numbers in the sub- G1 phase. The most sensitive are HCT-116 and HeLa cells. The thiadiazole derivatives have a pro-apoptotic effect on HCT-116 cells. In the case of the HeLa cells, an increase in the number of cells in the sub-G1- phase and the induction of apoptosis was observed.
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Affiliation(s)
- Katarzyna Żurawska
- Department of Organic Chemistry, Bioorganic Chemistry and Biotechnology, Faculty of Chemistry, Silesian University of Technology, Krzywoustego Street 4, 44-100 Gliwice, Poland; (K.Ż.); (M.S.); (P.K.); (W.S.); (K.W.)
- Centre of Biotechnology, Silesian University of Technology, Krzywoustego Street 8, 44-100 Gliwice, Poland; (K.P.); (M.S.)
| | - Marcin Stokowy
- Department of Organic Chemistry, Bioorganic Chemistry and Biotechnology, Faculty of Chemistry, Silesian University of Technology, Krzywoustego Street 4, 44-100 Gliwice, Poland; (K.Ż.); (M.S.); (P.K.); (W.S.); (K.W.)
| | - Patryk Kapica
- Department of Organic Chemistry, Bioorganic Chemistry and Biotechnology, Faculty of Chemistry, Silesian University of Technology, Krzywoustego Street 4, 44-100 Gliwice, Poland; (K.Ż.); (M.S.); (P.K.); (W.S.); (K.W.)
- Centre of Biotechnology, Silesian University of Technology, Krzywoustego Street 8, 44-100 Gliwice, Poland; (K.P.); (M.S.)
| | - Monika Olesiejuk
- Department of Chemical Organic Technology and Petrochemistry, The Silesian University of Technology, Krzywoustego Street 4, 44-100 Gliwice, Poland; (M.O.); (A.K.)
| | - Agnieszka Kudelko
- Department of Chemical Organic Technology and Petrochemistry, The Silesian University of Technology, Krzywoustego Street 4, 44-100 Gliwice, Poland; (M.O.); (A.K.)
| | - Katarzyna Papaj
- Centre of Biotechnology, Silesian University of Technology, Krzywoustego Street 8, 44-100 Gliwice, Poland; (K.P.); (M.S.)
| | - Magdalena Skonieczna
- Centre of Biotechnology, Silesian University of Technology, Krzywoustego Street 8, 44-100 Gliwice, Poland; (K.P.); (M.S.)
- Department of Systems Biology and Engineering, The Silesian University of Technology, Akademicka Street 16, 44-100 Gliwice, Poland
| | - Wiesław Szeja
- Department of Organic Chemistry, Bioorganic Chemistry and Biotechnology, Faculty of Chemistry, Silesian University of Technology, Krzywoustego Street 4, 44-100 Gliwice, Poland; (K.Ż.); (M.S.); (P.K.); (W.S.); (K.W.)
| | - Krzysztof Walczak
- Department of Organic Chemistry, Bioorganic Chemistry and Biotechnology, Faculty of Chemistry, Silesian University of Technology, Krzywoustego Street 4, 44-100 Gliwice, Poland; (K.Ż.); (M.S.); (P.K.); (W.S.); (K.W.)
| | - Anna Kasprzycka
- Department of Organic Chemistry, Bioorganic Chemistry and Biotechnology, Faculty of Chemistry, Silesian University of Technology, Krzywoustego Street 4, 44-100 Gliwice, Poland; (K.Ż.); (M.S.); (P.K.); (W.S.); (K.W.)
- Centre of Biotechnology, Silesian University of Technology, Krzywoustego Street 8, 44-100 Gliwice, Poland; (K.P.); (M.S.)
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21
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Li X, Ma Z, Liu R, Hurevich M, Yang Y. Photolabile Protecting
Group‐Mediated
Synthesis of
2‐Deoxy‐Glycosides. CHINESE J CHEM 2021. [DOI: 10.1002/cjoc.202100477] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Affiliation(s)
- Xiaoqian Li
- Shanghai Key Laboratory of New Drug Design, Engineering Research Center of Pharmaceutical Process Chemistry, Ministry of Education School of Pharmacy East China University of Science and Technology, 130 Meilong Road Shanghai 200237 China
| | - Zhi Ma
- Shanghai Key Laboratory of New Drug Design, Engineering Research Center of Pharmaceutical Process Chemistry, Ministry of Education School of Pharmacy East China University of Science and Technology, 130 Meilong Road Shanghai 200237 China
| | - Rongkun Liu
- Shanghai Key Laboratory of New Drug Design, Engineering Research Center of Pharmaceutical Process Chemistry, Ministry of Education School of Pharmacy East China University of Science and Technology, 130 Meilong Road Shanghai 200237 China
| | - Mattan Hurevich
- Institute of Chemistry Safra Campus, Givat Ram, Hebrew University of Jerusalem 91904 Israel
| | - You Yang
- Shanghai Key Laboratory of New Drug Design, Engineering Research Center of Pharmaceutical Process Chemistry, Ministry of Education School of Pharmacy East China University of Science and Technology, 130 Meilong Road Shanghai 200237 China
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22
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Zhao X, Wu B, Shu P, Meng L, Zeng J, Wan Q. Rhenium(V)-catalyzed synthesis of 1,1'-2-deoxy thioglycosides. Carbohydr Res 2021; 508:108415. [PMID: 34358864 DOI: 10.1016/j.carres.2021.108415] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2021] [Revised: 07/17/2021] [Accepted: 07/27/2021] [Indexed: 11/29/2022]
Abstract
As stable glycomimetics, thioglycosides are important tools for the investigation of biological processes and discovery of new drugs. In this note, we report a ReOCl3(SMe2)(OPPh3) catalyzed coupling reaction between β-glycosyl thiols (1-thio sugars) and glycals for the preparation of 1,1'-α,β-2-deoxy thioglycosides, which are glycomimetics of natural trehalose and 2-deoxy glycosides. Furthermore, an S-linked trisaccharide was successfully obtained by successive employment of the Re(V) catalyzed thioglycosylation protocol.
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Affiliation(s)
- Xiang Zhao
- Hubei Key Laboratory of Natural Medicinal Chemistry and Resource Evaluation, School of Pharmacy, Huazhong University of Science and Technology, 13 Hangkong Road, Wuhan, Hubei, 430030, China
| | - Bin Wu
- Hubei Key Laboratory of Natural Medicinal Chemistry and Resource Evaluation, School of Pharmacy, Huazhong University of Science and Technology, 13 Hangkong Road, Wuhan, Hubei, 430030, China
| | - Penghua Shu
- Hubei Key Laboratory of Natural Medicinal Chemistry and Resource Evaluation, School of Pharmacy, Huazhong University of Science and Technology, 13 Hangkong Road, Wuhan, Hubei, 430030, China
| | - Lingkui Meng
- Hubei Key Laboratory of Natural Medicinal Chemistry and Resource Evaluation, School of Pharmacy, Huazhong University of Science and Technology, 13 Hangkong Road, Wuhan, Hubei, 430030, China
| | - Jing Zeng
- Hubei Key Laboratory of Natural Medicinal Chemistry and Resource Evaluation, School of Pharmacy, Huazhong University of Science and Technology, 13 Hangkong Road, Wuhan, Hubei, 430030, China
| | - Qian Wan
- Hubei Key Laboratory of Natural Medicinal Chemistry and Resource Evaluation, School of Pharmacy, Huazhong University of Science and Technology, 13 Hangkong Road, Wuhan, Hubei, 430030, China; Institute of Brain Research, Huazhong University of Science and Technology, 13 Hangkong Road, Wuhan, Hubei, 430030, China.
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23
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Abstract
A new synthetic approach toward oligosaccharides consisting only of 2,3,6-trideoxypyranoglycosides is reported. The key feature is highlighted by the convergent approach that allows the introduction of the aglycon moiety in the late stage of the synthesis. As an illustrative example, the tetrasaccharide portion of cervimycin K was prepared as cyclohexyl glycoside.
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Affiliation(s)
- Jihun Kang
- Department of Chemistry, POSTECH, 77 Cheongam-Ro, Nam-Gu, Pohang, Kyungbuk, Republic of Korea
| | - Young Ho Rhee
- Department of Chemistry, POSTECH, 77 Cheongam-Ro, Nam-Gu, Pohang, Kyungbuk, Republic of Korea
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24
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Wheatley DE, Fontenelle CQ, Kuppala R, Szpera R, Briggs EL, Vendeville JB, Wells NJ, Light ME, Linclau B. Synthesis and Structural Characteristics of all Mono- and Difluorinated 4,6-Dideoxy-d- xylo-hexopyranoses. J Org Chem 2021; 86:7725-7756. [PMID: 34029099 DOI: 10.1021/acs.joc.1c00796] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Protein-carbohydrate interactions are implicated in many biochemical/biological processes that are fundamental to life and to human health. Fluorinated carbohydrate analogues play an important role in the study of these interactions and find application as probes in chemical biology and as drugs/diagnostics in medicine. The availability and/or efficient synthesis of a wide variety of fluorinated carbohydrates is thus of great interest. Here, we report a detailed study on the synthesis of monosaccharides in which the hydroxy groups at their 4- and 6-positions are replaced by all possible mono- and difluorinated motifs. Minimization of protecting group use was a key aim. It was found that introducing electronegative substituents, either as protecting groups or as deoxygenation intermediates, was generally beneficial for increasing deoxyfluorination yields. A detailed structural study of this set of analogues demonstrated that dideoxygenation/fluorination at the 4,6-positions caused very little distortion both in the solid state and in aqueous solution. Unexpected trends in α/β anomeric ratios were identified. Increasing fluorine content always increased the α/β ratio, with very little difference between regio- or stereoisomers, except when 4,6-difluorinated.
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Affiliation(s)
- David E Wheatley
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, U.K
| | - Clement Q Fontenelle
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, U.K
| | - Ramakrishna Kuppala
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, U.K
| | - Robert Szpera
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, U.K
| | - Edward L Briggs
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, U.K
| | | | - Neil J Wells
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, U.K
| | - Mark E Light
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, U.K
| | - Bruno Linclau
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, U.K
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25
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Meng S, Li X, Zhu J. Recent advances in direct synthesis of 2-deoxy glycosides and thioglycosides. Tetrahedron 2021. [DOI: 10.1016/j.tet.2021.132140] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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26
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Nicolaou KC, Chen Q, Li R, Anami Y, Tsuchikama K. Total Synthesis of the Monomeric Unit of Lomaiviticin A. J Am Chem Soc 2020; 142:20201-20207. [DOI: 10.1021/jacs.0c10660] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- K. C. Nicolaou
- Department of Chemistry, BioScience Research Collaborative, Rice University, 6100 Main Street, Houston, Texas 77005, United States
| | - Qifeng Chen
- Department of Chemistry, BioScience Research Collaborative, Rice University, 6100 Main Street, Houston, Texas 77005, United States
| | - Ruofan Li
- Department of Chemistry, BioScience Research Collaborative, Rice University, 6100 Main Street, Houston, Texas 77005, United States
| | - Yasuaki Anami
- Texas Therapeutics Institute, The Brown Foundation Institute of Molecular Medicine, The University of Texas Health Science Center at Houston, 1881 East Road, Houston, Texas 77054, United States
| | - Kyoji Tsuchikama
- Texas Therapeutics Institute, The Brown Foundation Institute of Molecular Medicine, The University of Texas Health Science Center at Houston, 1881 East Road, Houston, Texas 77054, United States
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27
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Jeanneret RA, Johnson SE, Galan MC. Conformationally Constrained Glycosyl Donors as Tools to Control Glycosylation Outcomes. J Org Chem 2020; 85:15801-15826. [DOI: 10.1021/acs.joc.0c02045] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Robin A. Jeanneret
- School of Chemistry, University of Bristol, Cantock’s
Close, Bristol BS8 1TS, United Kingdom
| | - Simon E. Johnson
- School of Chemistry, University of Bristol, Cantock’s
Close, Bristol BS8 1TS, United Kingdom
| | - M. Carmen Galan
- School of Chemistry, University of Bristol, Cantock’s
Close, Bristol BS8 1TS, United Kingdom
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28
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Liu M, Liu K, Xiong D, Zhang H, Li T, Li B, Qin X, Bai J, Ye X. Stereoselective Electro‐2‐deoxyglycosylation from Glycals. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202006115] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Affiliation(s)
- Miao Liu
- State Key Laboratory of Natural and Biomimetic Drugs School of Pharmaceutical Sciences Peking University Xue Yuan Road No. 38 Beijing 100191 China
| | - Kai‐Meng Liu
- State Key Laboratory of Natural and Biomimetic Drugs School of Pharmaceutical Sciences Peking University Xue Yuan Road No. 38 Beijing 100191 China
| | - De‐Cai Xiong
- State Key Laboratory of Natural and Biomimetic Drugs School of Pharmaceutical Sciences Peking University Xue Yuan Road No. 38 Beijing 100191 China
- Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology Shandong University 27 Shanda Nanlu Jinan Shandong 250100 China
| | - Hanyu Zhang
- State Key Laboratory of Natural and Biomimetic Drugs School of Pharmaceutical Sciences Peking University Xue Yuan Road No. 38 Beijing 100191 China
| | - Tian Li
- State Key Laboratory of Natural and Biomimetic Drugs School of Pharmaceutical Sciences Peking University Xue Yuan Road No. 38 Beijing 100191 China
| | - Bohan Li
- State Key Laboratory of Natural and Biomimetic Drugs School of Pharmaceutical Sciences Peking University Xue Yuan Road No. 38 Beijing 100191 China
| | - Xianjin Qin
- State Key Laboratory of Natural and Biomimetic Drugs School of Pharmaceutical Sciences Peking University Xue Yuan Road No. 38 Beijing 100191 China
| | - Jinhe Bai
- State Key Laboratory of Natural and Biomimetic Drugs School of Pharmaceutical Sciences Peking University Xue Yuan Road No. 38 Beijing 100191 China
| | - Xin‐Shan Ye
- State Key Laboratory of Natural and Biomimetic Drugs School of Pharmaceutical Sciences Peking University Xue Yuan Road No. 38 Beijing 100191 China
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29
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Kumar M, Reddy TR, Gurawa A, Kashyap S. Copper(ii)-catalyzed stereoselective 1,2-addition vs. Ferrier glycosylation of "armed" and "disarmed" glycal donors. Org Biomol Chem 2020; 18:4848-4862. [PMID: 32608448 DOI: 10.1039/d0ob01042a] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Selective activation of "armed' and ''disarmed" glycal donors enabling the stereo-controlled glycosylations by employing Cu(ii)-catalyst as the promoter has been realized. The distinctive stereochemical outcome in the process is mainly influenced by the presence of diverse protecting groups on the donor and the solvent system employed. The protocol is compatible with a variety of aglycones including carbohydrates, amino acids, and natural products to access deoxy-glycosides and glycoconjugates with high α-anomeric selectivity. Notably, the synthetic practicality of the method is amply verified for the stereoselective assembling of trisaccharides comprising 2-deoxy components. Mechanistic studies involving deuterated experiments validate the syn-diastereoselective 1,2-addition of acceptors on the double bond of armed donors.
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Affiliation(s)
- Manoj Kumar
- Carbohydrate Chemistry Research Laboratory (CCRL), Department of Chemistry, Malaviya National Institute of Technology (MNIT), Jaipur-302017, India.
| | - Thurpu Raghavender Reddy
- Carbohydrate Chemistry Research Laboratory (CCRL), Department of Chemistry, Malaviya National Institute of Technology (MNIT), Jaipur-302017, India.
| | - Aakanksha Gurawa
- Carbohydrate Chemistry Research Laboratory (CCRL), Department of Chemistry, Malaviya National Institute of Technology (MNIT), Jaipur-302017, India.
| | - Sudhir Kashyap
- Carbohydrate Chemistry Research Laboratory (CCRL), Department of Chemistry, Malaviya National Institute of Technology (MNIT), Jaipur-302017, India.
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30
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Liu M, Liu KM, Xiong DC, Zhang H, Li T, Li B, Qin X, Bai J, Ye XS. Stereoselective Electro-2-deoxyglycosylation from Glycals. Angew Chem Int Ed Engl 2020; 59:15204-15208. [PMID: 32394599 DOI: 10.1002/anie.202006115] [Citation(s) in RCA: 33] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Indexed: 11/09/2022]
Abstract
We report a novel and highly stereoselective electro-2-deoxyglycosylation from glycals. This method features excellent stereoselectivity, scope, and functional-group tolerance. This process can also be applied to the modification of a wide range of natural products and drugs. Furthermore, a scalable synthesis of glycosylated podophyllotoxin and a one-pot trisaccharide synthesis through iterative electroglycosylations were achieved.
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Affiliation(s)
- Miao Liu
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
| | - Kai-Meng Liu
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
| | - De-Cai Xiong
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China.,Shandong Key Laboratory of Carbohydrate Chemistry and Glycobiology, Shandong University, 27 Shanda Nanlu, Jinan, Shandong, 250100, China
| | - Hanyu Zhang
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
| | - Tian Li
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
| | - Bohan Li
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
| | - Xianjin Qin
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
| | - Jinhe Bai
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
| | - Xin-Shan Ye
- State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing, 100191, China
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31
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Romeo JR, McDermott L, Bennett CS. Reagent-Controlled α-Selective Dehydrative Glycosylation of 2,6-Dideoxy Sugars: Construction of the Arugomycin Tetrasaccharide. Org Lett 2020; 22:3649-3654. [PMID: 32281384 PMCID: PMC7239334 DOI: 10.1021/acs.orglett.0c01153] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
The first synthesis of the tetrasaccharide fragment of the anthracycline natural product Arugomycin is described. A reagent controlled dehydrative glycosylation method involving cyclopropenium activation was utilized to synthesize the α-linkages with complete anomeric selectivity. The synthesis was completed in 20 total steps, and in 2.5% overall yield with a longest linear sequence of 15 steps.
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Affiliation(s)
- Joseph R Romeo
- Department of Chemistry, Tufts University, Medford, Massachusetts 02155, United States
| | - Luca McDermott
- Department of Chemistry, Tufts University, Medford, Massachusetts 02155, United States
| | - Clay S Bennett
- Department of Chemistry, Tufts University, Medford, Massachusetts 02155, United States
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32
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C1 Oxidation/C2 Reduction Isomerization of Unprotected Aldoses Induced by Light/Ketone. Angew Chem Int Ed Engl 2020; 59:2755-2759. [DOI: 10.1002/anie.201914242] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2019] [Indexed: 01/17/2023]
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33
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Flexible Total Synthesis of 11‐Deoxylandomycins and Their Non‐Natural Analogues by Way of Asymmetric Metal Catalysis. Angew Chem Int Ed Engl 2020; 59:2349-2353. [DOI: 10.1002/anie.201913706] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2019] [Indexed: 11/07/2022]
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34
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Masuda Y, Tsuda H, Murakami M. C1 Oxidation/C2 Reduction Isomerization of Unprotected Aldoses Induced by Light/Ketone. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201914242] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Affiliation(s)
- Yusuke Masuda
- Department of Synthetic Chemistry and Biological ChemistryKyoto University, Katsura Kyoto 615-8510 Japan
| | - Hiromu Tsuda
- Department of Synthetic Chemistry and Biological ChemistryKyoto University, Katsura Kyoto 615-8510 Japan
| | - Masahiro Murakami
- Department of Synthetic Chemistry and Biological ChemistryKyoto University, Katsura Kyoto 615-8510 Japan
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35
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Yalamanchili S, Miller W, Chen X, Bennett CS. Rapid de Novo Preparation of 2,6-Dideoxy Sugar Libraries through Gold-Catalyzed Homopropargyl Orthoester Cyclization. Org Lett 2019; 21:9646-9651. [PMID: 31755271 PMCID: PMC6956608 DOI: 10.1021/acs.orglett.9b03812] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A flexible de novo route capable of producing libraries of 2,6-dideoxy sugars is described. We have found that Au(JackiePhos)SbF6MeCN promotes the conversion of homopropargyl orthoesters into functionalized 2,3-dihydro-4H-pyran-4-ones in good to excellent yields (71-90%). These latter compounds can be easily converted into a number of otherwise difficult to access 2,6-dideoxy sugars.
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Affiliation(s)
- Subbarao Yalamanchili
- Department of Chemistry, Tufts University, 62 Talbot Avenue, Medford, Massachusetts 02155, United States
| | - William Miller
- Department of Chemistry, Tufts University, 62 Talbot Avenue, Medford, Massachusetts 02155, United States
| | - Xizhao Chen
- Department of Chemistry, Tufts University, 62 Talbot Avenue, Medford, Massachusetts 02155, United States
| | - Clay S. Bennett
- Department of Chemistry, Tufts University, 62 Talbot Avenue, Medford, Massachusetts 02155, United States
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36
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Lee J, Kang J, Lee S, Rhee YH. Flexible Total Synthesis of 11‐Deoxylandomycins and Their Non‐Natural Analogues by Way of Asymmetric Metal Catalysis. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201913706] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Juyeol Lee
- Department of ChemistryPohang University of Science and Technology (POSTECH) Pohang 37673 Republic of Korea
| | - Jihun Kang
- Department of ChemistryPohang University of Science and Technology (POSTECH) Pohang 37673 Republic of Korea
| | - Sukhyun Lee
- Department of ChemistryPohang University of Science and Technology (POSTECH) Pohang 37673 Republic of Korea
| | - Young Ho Rhee
- Department of ChemistryPohang University of Science and Technology (POSTECH) Pohang 37673 Republic of Korea
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37
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Shaw M, Kumar A. Additive‐Free Gold(III)‐Catalyzed Stereoselective Synthesis of 2‐Deoxyglycosides Using Phenylpropiolate Glycosides as Donors. Chem Asian J 2019; 14:4651-4658. [DOI: 10.1002/asia.201900888] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2019] [Revised: 08/05/2019] [Indexed: 11/07/2022]
Affiliation(s)
- Mukta Shaw
- Department of ChemistryIndian Institute of Technology Patna, Bihta 801106 Bihar India
| | - Amit Kumar
- Department of ChemistryIndian Institute of Technology Patna, Bihta 801106 Bihar India
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38
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Mizia JC, Bennett CS. Reagent Controlled Direct Dehydrative Glycosylation with 2-Deoxy Sugars: Construction of the Saquayamycin Z Pentasaccharide. Org Lett 2019; 21:5922-5927. [PMID: 31305082 DOI: 10.1021/acs.orglett.9b02056] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The first synthesis of the pentasaccharide fragment of the angucycline antibiotic saquayamycin Z is described. By using our sulfonyl chloride mediated reagent controlled dehydrative glycosylation, we are able to assemble the glycosidic linkages with high levels of anomeric selectivity. The total synthesis was completed in 25 total steps, and in 2.5% overall yield with a longest linear sequence of 15 steps.
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Affiliation(s)
- J Colin Mizia
- Department of Chemistry , Tufts University , Medford , Massachusetts 02155 , United States
| | - Clay S Bennett
- Department of Chemistry , Tufts University , Medford , Massachusetts 02155 , United States
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39
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Yalamanchili S, Lloyd D, Bennett CS. Synthesis of the Hexasaccharide Fragment of Landomycin A Using a Mild, Reagent-Controlled Approach. Org Lett 2019; 21:3674-3677. [PMID: 31021647 DOI: 10.1021/acs.orglett.9b01118] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The synthesis of the hexasaccharide fragment of landomycin A is reported. Using p-toluenesulfonyl chloride mediated dehydrative glycosylation, we constructed the deoxy-sugar linkages in a stereoselective fashion without the need for temporary prosthetic groups to control selectivity. Through this approach, the hexasaccharide was obtained in 28 steps and 8.9% overall yield, which is an order of magnitude higher than that of previously reported approaches.
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Affiliation(s)
- Subbarao Yalamanchili
- Department of Chemistry , Tufts University , 62 Talbot Avenue , Medford , Massachusetts 02155 , United States
| | - Dina Lloyd
- Department of Chemistry , Tufts University , 62 Talbot Avenue , Medford , Massachusetts 02155 , United States
| | - Clay S Bennett
- Department of Chemistry , Tufts University , 62 Talbot Avenue , Medford , Massachusetts 02155 , United States
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40
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Bihari Mishra K, Kandasamy J. Tris(Pentafluorophenyl)Borane‐Driven Stereoselective
O
‐Glycosylation with Glycal Donors under Mild Condition. ASIAN J ORG CHEM 2019. [DOI: 10.1002/ajoc.201900055] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Affiliation(s)
- Kunj Bihari Mishra
- Department of chemistryIndian Institute of Technology, IIT BHU Varanasi- 221005
| | - Jeyakumar Kandasamy
- Department of chemistryIndian Institute of Technology, IIT BHU Varanasi- 221005
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41
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Wang J, Deng C, Zhang Q, Chai Y. Tuning the Chemoselectivity of Silyl Protected Rhamnals by Temperature and Brønsted Acidity: Kinetically Controlled 1,2-Addition vs Thermodynamically Controlled Ferrier Rearrangement. Org Lett 2019; 21:1103-1107. [PMID: 30714737 DOI: 10.1021/acs.orglett.9b00009] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
An acidity- and temperature-dependent chemoselective glycosylation of silyl-protected rhamnals with alcohols has been revealed. The reaction undergoes a 1,2-addition pathway with (±)-CSA as the catalyst at rt, affording kinetically controlled 2-deoxyl rhamnosides. In contrast, only thermodynamically controlled 2,3-unsaturated rhamnosides are formed via Ferrier rearrangement when elevating reaction temperature to 85 °C or using CF3SO3H instead. This tunable glycosylation allows facile and practical access to both 2-deoxyl and 2,3-unsaturated rhamnosides with excellent yields and high α-stereoselectivity.
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Affiliation(s)
- Jincai Wang
- Key Laboratory of Applied Surface and Colloid Chemistry , Ministry of Education , Xi'an , Shaanxi 710119 , P. R. China.,School of Chemistry and Chemical Engineering , Shaanxi Normal University , Xi'an , Shaanxi 710119 , P. R. China
| | - Chuqiao Deng
- Key Laboratory of Applied Surface and Colloid Chemistry , Ministry of Education , Xi'an , Shaanxi 710119 , P. R. China.,School of Chemistry and Chemical Engineering , Shaanxi Normal University , Xi'an , Shaanxi 710119 , P. R. China
| | - Qi Zhang
- School of Chemistry and Chemical Engineering , Shaanxi Normal University , Xi'an , Shaanxi 710119 , P. R. China
| | - Yonghai Chai
- Key Laboratory of Applied Surface and Colloid Chemistry , Ministry of Education , Xi'an , Shaanxi 710119 , P. R. China.,School of Chemistry and Chemical Engineering , Shaanxi Normal University , Xi'an , Shaanxi 710119 , P. R. China
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42
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Bradshaw GA, Colgan AC, Allen NP, Pongener I, Boland MB, Ortin Y, McGarrigle EM. Stereoselective organocatalyzed glycosylations - thiouracil, thioureas and monothiophthalimide act as Brønsted acid catalysts at low loadings. Chem Sci 2019; 10:508-514. [PMID: 30713648 PMCID: PMC6334493 DOI: 10.1039/c8sc02788a] [Citation(s) in RCA: 40] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2018] [Accepted: 10/15/2018] [Indexed: 01/21/2023] Open
Abstract
Thiouracil catalyzes stereoselective glycosylations with galactals in loadings as low as 0.1 mol%. It is proposed that in these glycosylations thiouracil, monothiophthalimide, and the previously reported catalyst, Schreiner's thiourea, do not operate via a double H-bonding mechanism but rather by Brønsted acid/base catalysis. In addition to the synthesis of 2-deoxyglycosides and glycoconjugates, we report the first organocatalytic synthesis of 1,1'-linked trehalose-type sugars.
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Affiliation(s)
- G A Bradshaw
- Centre for Synthesis & Chemical Biology , UCD School of Chemistry , University College Dublin , Belfield , Dublin 4 , Ireland .
| | - A C Colgan
- Centre for Synthesis & Chemical Biology , UCD School of Chemistry , University College Dublin , Belfield , Dublin 4 , Ireland .
| | - N P Allen
- Centre for Synthesis & Chemical Biology , UCD School of Chemistry , University College Dublin , Belfield , Dublin 4 , Ireland .
| | - I Pongener
- Centre for Synthesis & Chemical Biology , UCD School of Chemistry , University College Dublin , Belfield , Dublin 4 , Ireland .
| | - M B Boland
- Centre for Synthesis & Chemical Biology , UCD School of Chemistry , University College Dublin , Belfield , Dublin 4 , Ireland .
| | - Y Ortin
- Centre for Synthesis & Chemical Biology , UCD School of Chemistry , University College Dublin , Belfield , Dublin 4 , Ireland .
| | - E M McGarrigle
- Centre for Synthesis & Chemical Biology , UCD School of Chemistry , University College Dublin , Belfield , Dublin 4 , Ireland .
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43
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Lee J, Kang S, Kim J, Moon D, Rhee YH. A Convergent Synthetic Strategy towards Oligosaccharides containing 2,3,6-Trideoxypyranoglycosides. Angew Chem Int Ed Engl 2018; 58:628-631. [DOI: 10.1002/anie.201812222] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2018] [Revised: 11/15/2018] [Indexed: 11/09/2022]
Affiliation(s)
- Juyeol Lee
- Department of Chemistry; Pohang University of Science and Technology (POSTECH); Pohang 37673 Republic of Korea
| | - Soyeong Kang
- Department of Chemistry; Pohang University of Science and Technology (POSTECH); Pohang 37673 Republic of Korea
| | - Jungjoon Kim
- Department of Chemistry; Pohang University of Science and Technology (POSTECH); Pohang 37673 Republic of Korea
| | - Dohyun Moon
- Department of Beamline; Pohang Accelerator Laboratory; Pohang 37673 Republic of Korea
| | - Young Ho Rhee
- Department of Chemistry; Pohang University of Science and Technology (POSTECH); Pohang 37673 Republic of Korea
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44
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Lee J, Kang S, Kim J, Moon D, Rhee YH. A Convergent Synthetic Strategy towards Oligosaccharides containing 2,3,6-Trideoxypyranoglycosides. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201812222] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Juyeol Lee
- Department of Chemistry; Pohang University of Science and Technology (POSTECH); Pohang 37673 Republic of Korea
| | - Soyeong Kang
- Department of Chemistry; Pohang University of Science and Technology (POSTECH); Pohang 37673 Republic of Korea
| | - Jungjoon Kim
- Department of Chemistry; Pohang University of Science and Technology (POSTECH); Pohang 37673 Republic of Korea
| | - Dohyun Moon
- Department of Beamline; Pohang Accelerator Laboratory; Pohang 37673 Republic of Korea
| | - Young Ho Rhee
- Department of Chemistry; Pohang University of Science and Technology (POSTECH); Pohang 37673 Republic of Korea
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45
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Abstract
Deoxy-sugars often play a critical role in modulating the potency of many bioactive natural products. Accordingly, there has been sustained interest in methods for their synthesis over the past several decades. The focus of much of this work has been on developing new glycosylation reactions that permit the mild and selective construction of deoxyglycosides. This Review covers classical approaches to deoxyglycoside synthesis, as well as more recently developed chemistry that aims to control the selectivity of the reaction through rational design of the promoter. Where relevant, the application of this chemistry to natural product synthesis will also be described.
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Affiliation(s)
- Clay S. Bennett
- Department
of Chemistry, Tufts University, 62 Talbot Avenue, Medford, Massachusetts 02155, United States
| | - M. Carmen Galan
- School
of Chemistry, University of Bristol, Cantock’s Close, Bristol BS8 1TS, United Kingdom
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46
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Liu C, Ma Y, Pei C, Li W, Yu B. A Glycal Approach to the Synthesis of Pregnane Glycoside P57. CHINESE J CHEM 2018. [DOI: 10.1002/cjoc.201800331] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Affiliation(s)
- Chao Liu
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry; University of Chinese Academy of Sciences, Chinese Academy of Sciences; 345 Lingling Road, Shanghai 200032 China
| | - Yuyong Ma
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry; University of Chinese Academy of Sciences, Chinese Academy of Sciences; 345 Lingling Road, Shanghai 200032 China
| | - Chengfeng Pei
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry; University of Chinese Academy of Sciences, Chinese Academy of Sciences; 345 Lingling Road, Shanghai 200032 China
| | - Wei Li
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry; University of Chinese Academy of Sciences, Chinese Academy of Sciences; 345 Lingling Road, Shanghai 200032 China
- Department of Medicinal Chemistry; China Pharmaceutical University; 24 Tong Jia Xiang, Nanjing Jiangsu 210009 China
| | - Biao Yu
- State Key Laboratory of Bioorganic and Natural Products Chemistry, Center for Excellence in Molecular Synthesis, Shanghai Institute of Organic Chemistry; University of Chinese Academy of Sciences, Chinese Academy of Sciences; 345 Lingling Road, Shanghai 200032 China
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47
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Mestre J, Collado D, Benito-Alifonso D, Rodríguez MA, Matheu MI, Díaz Y, Castillón S, Boutureira O. Highly reactive 2-deoxy-2-iodo-d- allo and d- gulo pyranosyl sulfoxide donors ensure β-stereoselective glycosylations with steroidal aglycones. RSC Adv 2018; 8:30076-30079. [PMID: 35546863 PMCID: PMC9085402 DOI: 10.1039/c8ra06619a] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2018] [Accepted: 08/11/2018] [Indexed: 12/31/2022] Open
Abstract
The preparation of well-defined d-xylo and d-ribo glycosides represents a synthetic challenge due to the limited configurational availability of starting materials and the laborious synthesis of homogeneous 2-deoxy-β-glycosidic linkages, in particular that of the sugar-steroid motif, which represents the "stereoselective determining step" of the overall synthesis. Herein we describe the use of 2-deoxy-2-iodo-glycopyranosyl sulfoxides accessible from widely available d-xylose and d-ribose monosaccharides as privileged glycosyl donors that permit activation at very low temperature. This ensures a precise kinetic control for a complete 1,2-trans stereoselective glycosylation of particularly challenging steroidal aglycones.
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Affiliation(s)
- Jordi Mestre
- Departament de Química Analítica i Química Orgànica, Universitat Rovira i Virgili C/Marcel·lí Domingo 1 43007 Tarragona Spain
| | - David Collado
- Departament de Química Analítica i Química Orgànica, Universitat Rovira i Virgili C/Marcel·lí Domingo 1 43007 Tarragona Spain
| | - David Benito-Alifonso
- Departament de Química Analítica i Química Orgànica, Universitat Rovira i Virgili C/Marcel·lí Domingo 1 43007 Tarragona Spain
| | - Miguel A Rodríguez
- Departament de Química Analítica i Química Orgànica, Universitat Rovira i Virgili C/Marcel·lí Domingo 1 43007 Tarragona Spain
| | - M Isabel Matheu
- Departament de Química Analítica i Química Orgànica, Universitat Rovira i Virgili C/Marcel·lí Domingo 1 43007 Tarragona Spain
| | - Yolanda Díaz
- Departament de Química Analítica i Química Orgànica, Universitat Rovira i Virgili C/Marcel·lí Domingo 1 43007 Tarragona Spain
| | - Sergio Castillón
- Departament de Química Analítica i Química Orgànica, Universitat Rovira i Virgili C/Marcel·lí Domingo 1 43007 Tarragona Spain
| | - Omar Boutureira
- Departament de Química Analítica i Química Orgànica, Universitat Rovira i Virgili C/Marcel·lí Domingo 1 43007 Tarragona Spain
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48
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Affiliation(s)
- Michael Martin Nielsen
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100 Copenhagen, Denmark
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49
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Lloyd D, Bennett CS. An Improved Approach to the Direct Construction of 2-Deoxy-β-Linked Sugars: Applications to Oligosaccharide Synthesis. Chemistry 2018; 24:7610-7614. [PMID: 29572995 DOI: 10.1002/chem.201800736] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2018] [Revised: 03/19/2018] [Indexed: 02/05/2023]
Abstract
A next-generation reagent-controlled approach for the synthesis of 2,6-dideoxy and 2,3,6-trideoxy sugar donors in good yield and high β-selectivity is reported. The use of p-toluenesulfonyl chloride and potassium hexamethyldisilazide (KHMDS) greatly simplifies deoxy-sugar glycoside construction, and can be used for gram-scale glycosylation reactions. The development of this approach and its application to the construction of β-linked deoxy-sugar oligosaccharides are described.
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Affiliation(s)
- Dina Lloyd
- Department Department of Chemistry, Tufts University, 62 Talbot Ave., Medford, MA, 02155, USA
| | - Clay S Bennett
- Department Department of Chemistry, Tufts University, 62 Talbot Ave., Medford, MA, 02155, USA
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Sidoryk K, Cmoch P, Świtalska M, Trzaskowski B, Wietrzyk J, Cybulski M. Efficient glycosylation of natural Danshensu and its enantiomer by sugar and 2-deoxy sugar donors. Carbohydr Res 2018; 460:19-28. [PMID: 29501860 DOI: 10.1016/j.carres.2018.02.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2018] [Revised: 02/07/2018] [Accepted: 02/07/2018] [Indexed: 11/15/2022]
Abstract
An efficient methodology of the glycosylation process of a secondary plant metabolite (R-Danshensu) and its enantiomer by sugar and 2-deoxy sugar donors was developed. The overall synthesis of the new sugar derivatives involved two steps, starting from the previously synthesized protected R and S Danshensu (1 and 2). The deoxy sugar derivatives of R and S Danshensu were obtained from available tri-O-acetyl-2-deoxy-D-glucal and di-O-acetyl-2-deoxy-D-ramnal. The direct glycosylation of 1 and 2 using glycal activation by an acid catalyst in all cases led to the α-anomers of deoxy sugar derivatives with good yields. As a result, a novel group of sugar and deoxy sugar conjugates with optically pure polyphenolic acids was successfully synthesized and their cytotoxic profile against two cancer cell lines was tested. An advantageous ADME profile and antiproliferative data classified this new group of compounds as a promising scaffold for further modification of more potent and selective anticancer agents.
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Affiliation(s)
- Katarzyna Sidoryk
- Pharmaceutical Research Institute, 8 Rydygiera Street, 01-793 Warsaw, Poland.
| | - Piotr Cmoch
- Pharmaceutical Research Institute, 8 Rydygiera Street, 01-793 Warsaw, Poland
| | - Marta Świtalska
- Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 12 Weigla Street, 53-114 Wroclaw, Poland
| | - Bartosz Trzaskowski
- University of Warsaw, Centre of New Technologies, 2c S. Banacha Street, 02-097 Warsaw, Poland
| | - Joanna Wietrzyk
- Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 12 Weigla Street, 53-114 Wroclaw, Poland
| | - Marcin Cybulski
- Pharmaceutical Research Institute, 8 Rydygiera Street, 01-793 Warsaw, Poland
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