1
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Demeter F, Peleskei Z, Kútvölgyi K, Rusznyák Á, Fenyvesi F, Kajtár R, Sipos É, Lekli I, Molnár P, Szöllősi AG, Lisztes E, Tóth BI, Borbás A, Herczeg M. Synthesis and Biological Profiling of Seven Heparin and Heparan Sulphate Analogue Trisaccharides. Biomolecules 2024; 14:1052. [PMID: 39334821 PMCID: PMC11429564 DOI: 10.3390/biom14091052] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2024] [Revised: 08/07/2024] [Accepted: 08/23/2024] [Indexed: 09/30/2024] Open
Abstract
Researchers are paying increasing attention to the strongly negatively charged heteropolysaccharides in cells, in the extracellular matrix or in the cell wall. Examples of such molecules are glycosaminoglycans (e.g., heparin, heparan sulphate). It is well known from the literature that heparin and its derivatives have anti-inflammatory, angiogenic, metastatic and growth factor inhibitory activity. Herein, we present the efficient synthesis of six non-glycosaminoglycan (Glc-GlcA-Glc-sequenced) and one heparin-related (GlcN-GlcA-Glc-sequenced) trisaccharides with various functional group patterns. The anti-inflammatory, antioxidant and cell growth-inhibitory/cytotoxic effects of the synthesized compounds were tested. Among the investigated molecules, we have found some derivatives with a promising anti-inflammatory and antioxidant effect.
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Affiliation(s)
- Fruzsina Demeter
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary
| | - Zsófia Peleskei
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary
| | - Katalin Kútvölgyi
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary
| | - Ágnes Rusznyák
- Department of Molecular and Nanopharmaceutics, Faculty of Pharmacy, University of Debrecen, Nagyerdei Körút 98, H-4032 Debrecen, Hungary
- Institute of Healthcare Industry, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary
| | - Ferenc Fenyvesi
- Department of Molecular and Nanopharmaceutics, Faculty of Pharmacy, University of Debrecen, Nagyerdei Körút 98, H-4032 Debrecen, Hungary
| | - Richárd Kajtár
- Department of Pharmacodynamics, Faculty of Pharmacy, University of Debrecen, Nagyerdei Körút 98, H-4032 Debrecen, Hungary
| | - Éva Sipos
- Department of Pharmacodynamics, Faculty of Pharmacy, University of Debrecen, Nagyerdei Körút 98, H-4032 Debrecen, Hungary
| | - István Lekli
- Department of Pharmacodynamics, Faculty of Pharmacy, University of Debrecen, Nagyerdei Körút 98, H-4032 Debrecen, Hungary
| | - Petra Molnár
- Department of Immunology, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary
| | - Attila Gábor Szöllősi
- Department of Immunology, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary
| | - Erika Lisztes
- Department of Physiology, University of Debrecen, P.O. Box 22, H-4012 Debrecen, Hungary
| | - Balázs István Tóth
- Department of Physiology, University of Debrecen, P.O. Box 22, H-4012 Debrecen, Hungary
- Department of Physiology, Medical School, University of Pécs, Szigeti út 12, H-7624 Pécs, Hungary
| | - Anikó Borbás
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary
- HUN-REN-DE Molecular Recognition and Interaction Research Group, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary
| | - Mihály Herczeg
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary
- HUN-REN-DE Molecular Recognition and Interaction Research Group, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary
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2
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Mondal S, Tseng CJ, Tan JJY, Lin DY, Lin HY, Weng JH, Lin CH, Mong KKT. Tunable Strategy for the Asymmetric Synthesis of Sulfoglycolipids from Mycobacterium tuberculosis To Elucidate the Structure and Immunomodulatory Property Relationships. Angew Chem Int Ed Engl 2023; 62:e202212514. [PMID: 36349422 DOI: 10.1002/anie.202212514] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2022] [Indexed: 11/11/2022]
Abstract
We developed a versatile asymmetric strategy to synthesize different classes of sulfoglycolipids (SGLs) from Mycobacterium tuberculosis. The strategy features the use of asymmetrically protected trehaloses, which were acquired from the glycosylation of TMS α-glucosyl acceptors with benzylidene-protected thioglucosyl donors. The positions of the protecting groups at the donors and acceptors can be fine-tuned to obtain different protecting-group patterns, which is crucial for regioselective acylation and sulfation. In addition, a chemoenzymatic strategy was established to prepare the polymethylated fatty acid building blocks. The strategy employs inexpensive lipase as a desymmetrization agent in the preparation of the starting substrate and readily available chiral oxazolidinone as a chirality-controlling agent in the construction of the polymethylated fatty acids. A subsequent investigation on the immunomodulatory properties of each class of SGLs showed how the structures of SGLs impact the host innate immunity response.
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Affiliation(s)
- Soumik Mondal
- Applied Chemistry Department, National Yang Ming Chiao Tung University (Previously National Chiao Tung University), 1001, University Road, Hsinchu City, Taiwan, R. O. C
| | - Chieh-Jen Tseng
- Applied Chemistry Department, National Yang Ming Chiao Tung University (Previously National Chiao Tung University), 1001, University Road, Hsinchu City, Taiwan, R. O. C
| | - Janet Jia-Yin Tan
- Institute of Biological Chemistry, Academia Sinica, No.128, Academia Road Section2, Nan-Kang, Taipei, 11529, Taiwan
| | - Ding-Yuan Lin
- Applied Chemistry Department, National Yang Ming Chiao Tung University (Previously National Chiao Tung University), 1001, University Road, Hsinchu City, Taiwan, R. O. C
| | - Hsien-Ya Lin
- Institute of Biological Chemistry, Academia Sinica, No.128, Academia Road Section2, Nan-Kang, Taipei, 11529, Taiwan
| | - Jui-Hsia Weng
- Institute of Biological Chemistry, Academia Sinica, No.128, Academia Road Section2, Nan-Kang, Taipei, 11529, Taiwan
| | - Chun-Hung Lin
- Institute of Biological Chemistry, Academia Sinica, No.128, Academia Road Section2, Nan-Kang, Taipei, 11529, Taiwan.,Graduate Institute of Biotechnology and Biotechnology Center, National Chung-Hsing University, Taichung, 40227, Taiwan.,Department of Chemistry and Institute of Biochemical Sciences, National Taiwan University, Taipei, 10617, Taiwan
| | - Kwok-Kong Tony Mong
- Applied Chemistry Department, National Yang Ming Chiao Tung University (Previously National Chiao Tung University), 1001, University Road, Hsinchu City, Taiwan, R. O. C
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3
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Del Vigo EA, Stortz CA, Marino C. D-Allose, a rare sugar. Synthesis of D-allopyranosyl acceptors from glucose, and their regioselectivity in glycosidation reactions. Org Biomol Chem 2022; 20:4589-4598. [PMID: 35593891 DOI: 10.1039/d2ob00590e] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Although D-allose (D-All) is a sugar with low natural abundance, it has great pharmacological and alimentary potential due to its biological properties. However, its chemistry, regarding the regioselectivity in protective reactions and glycosidations, has been scarcely explored. Glycobiological studies require appreciable quantities of carbohydrates with defined structures and high purity. Thus, the development of efficient strategies for their synthesis is crucial. In this frame, the knowledge of the regioselectivity between different hydroxyl groups of glycosyl acceptors is valuable because it allows minimizing the use of protecting groups. We have long been interested in the relative reactivity of OH-3 and OH-4 of glycosyl acceptors in glycosidation reactions. In this paper we synthesized D-allose glycopyranosyl acceptors with free OH-3 and OH-4 from D-Glc precursors. We assessed glycosidations with galactose trichloroacetimidates as donors and the experimental results were compared with those obtained by molecular modeling. Axial O-3 was the preferred site of glycosylation for α-anomers, whereas equatorial O-4 was the preferred site for a β-anomer. A good correlation between the experimental and modeling results was observed using atomic charges and cationic intermediates, although Fukui indices did not predict adequately the experimental results. The achieved regioselectivities are useful for the efficient design of oligosaccharide synthesis containing D-All moieties.
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Affiliation(s)
- Enrique A Del Vigo
- CIHIDECAR, Departamento de Química Orgánica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Pabellón II, Ciudad Universitaria, 1428 Buenos Aires, Argentina.
| | - Carlos A Stortz
- CIHIDECAR, Departamento de Química Orgánica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Pabellón II, Ciudad Universitaria, 1428 Buenos Aires, Argentina.
| | - Carla Marino
- CIHIDECAR, Departamento de Química Orgánica, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Pabellón II, Ciudad Universitaria, 1428 Buenos Aires, Argentina.
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4
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Hénault J, Quellier P, Mock-Joubert M, Le Narvor C, Alix A, Bonnaffé D. Regioselective Reductive Opening of Benzylidene Acetals with Dichlorophenylborane/Triethylsilane: Previously Unreported Side Reactions and How to Prevent Them. J Org Chem 2022; 87:963-973. [PMID: 35015527 DOI: 10.1021/acs.joc.1c02141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Arylidene acetals are widely used protecting groups, because of not only the high regioselectivity of their introduction but also the possibility of performing further regioselective reductive opening in the presence of a hydride donor and an acid catalyst. In this context, the Et3SiH/PhBCl2 system presents several advantages: silanes are efficient, environmentally benign, and user-friendly hydride donors, while PhBCl2 opens the way to unique regioselectivity with regard to all other Brønsted or Lewis acids used with silanes. This system has been extensively used by several groups, and we have demonstrated its high regioselectivity in the reductive opening of 4,6- and 2,4-O-p-methoxybenzylidene moieties in protected disaccharides. Surprisingly, its use on 4,6-O-benzylidene-containing substrates 1 and 2 led to unreproducible yields due to the unexpected formation of several side products. Their characterizations allowed us to identify different pitfalls potentially affecting the outcome of reductive opening of arylidenes with the Et3SiH/PhBCl2 reagent system: alkene hydroboration, azide reduction, and/or Lewis acid-promoted cleavage of the arylidene. With this knowledge, we optimized reproducible and high-yielding reaction conditions that secure and extend the scope of the Et3SiH/PhBCl2 system as a reagent for the regioselective opening of arylidenes in complex and multifunctional molecules.
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Affiliation(s)
- Jérôme Hénault
- Université Paris-Saclay, CNRS, Institut de chimie moléculaire et des matériaux d'Orsay, 91405 Orsay, France
| | - Pauline Quellier
- Université Paris-Saclay, CNRS, Institut de chimie moléculaire et des matériaux d'Orsay, 91405 Orsay, France
| | - Maxime Mock-Joubert
- Université Paris-Saclay, CNRS, Institut de chimie moléculaire et des matériaux d'Orsay, 91405 Orsay, France
| | - Christine Le Narvor
- Université Paris-Saclay, CNRS, Institut de chimie moléculaire et des matériaux d'Orsay, 91405 Orsay, France
| | - Aurélien Alix
- Université Paris-Saclay, CNRS, Institut de chimie moléculaire et des matériaux d'Orsay, 91405 Orsay, France
| | - David Bonnaffé
- Université Paris-Saclay, CNRS, Institut de chimie moléculaire et des matériaux d'Orsay, 91405 Orsay, France
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5
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Mezö E, Herczeg M, Demeter F, Bereczki I, Csávás M, Borbás A. Systematic Study of Regioselective Reductive Ring-Opening Reactions of 4,6- O-Halobenzylidene Acetals of Glucopyranosides. J Org Chem 2021; 86:12973-12987. [PMID: 34478619 DOI: 10.1021/acs.joc.1c01667] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Reductive openings of cyclic acetals are widely used in modern synthetic organic chemistry for the regioselective introduction of protecting groups. A systematic study was performed on the applicability and efficacy of various hydride donor and protic or Lewis acid reagent combinations in the reductive ring opening of glucosidic 4,6-halobenzylidene acetals bearing an ortho-, meta-, and para-chloro- or -bromo substituent on the benzene ring. Most of the reagent combinations tested cleaved the 4,6-O-halobenzylidene acetal rings at O4 or O6 efficiently and with the expected regioselectivity. The LiAlH4-AlCl3 and the BH3·THF-TMSOTf combinations produced the 4-O-halobenzyl ether/6-OH products with complete regioselectivity and high yields. The use of Me3N·BH3-AlCl3 reagent system in toluene was also effective in cleaving the acetal ring at O6 but was accompanied by Al-chelation-assisted debenzylation side reactions. The NaCNBH3-HCl and the Et3SiH-BF3·Et2O combinations were highly effective in yielding the 6-halobenzyl ether/4-OH derivatives. Et3SiH, in combination with TfOH, produced the 6-O-ether/4-OH products in rapid reactions but also triggered silylation and reductive halobenzylation as secondary transformations. Reductive opening of the 1,3-dioxane ring of pyranosidic 4,6-O-halobenzylidene acetals by the proper reagent combination was found to be an efficient method for the regioselective introduction of versatile halobenzyl protecting groups onto the pyranose ring.
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Affiliation(s)
- Erika Mezö
- Department of Pharmaceutical Chemistry, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary
| | - Mihály Herczeg
- Department of Pharmaceutical Chemistry, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary.,Research Group for Oligosaccharide Chemistry of Hungarian Academy of Sciences, Egyetem tér 1, H-4032 Debrecen, Hungary
| | - Fruzsina Demeter
- Department of Pharmaceutical Chemistry, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary
| | - Ilona Bereczki
- Department of Pharmaceutical Chemistry, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary
| | - Magdolna Csávás
- MTA-DE Molecular Recognition and Interaction Research Group, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary
| | - Anikó Borbás
- Department of Pharmaceutical Chemistry, University of Debrecen, Egyetem tér 1, H-4032 Debrecen, Hungary
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6
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Studzian M, Pérez ME, Arias-Pérez MS. Experimental observations on the reductive cleavage of endo and exo 3,4-O-benzylidene fucopyranoside derivatives. Carbohydr Res 2021; 505:108338. [PMID: 34023694 DOI: 10.1016/j.carres.2021.108338] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2021] [Revised: 04/19/2021] [Accepted: 05/04/2021] [Indexed: 10/21/2022]
Abstract
Reductive cleavage of methyl 3,4-O-benzylidene-α-L-fucopyranosides with BH3·THF-TfOH and NaCNBH3-TfOH systems resulted in enhanced reaction rates and selectivity compared to BH3·THF-Bu2BOTf. With this latter system, the nature of the O-2 substituent exerted a clear control on the reactivity but practically did not affect the regioselectivity. With TfOH the direction of cleavage was determined, as expected, by the configuration of the acetal carbon atom, but slightly influenced by its competitive epimerization. Protic conditions provided higher regioselectivity in the openings of the exo isomers, affording a useful approach to the practical synthesis of 3-O-benzyl ethers.
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Affiliation(s)
- Maciej Studzian
- Departamento de Química Orgánica y Química Inorgánica, Universidad de Alcalá, 28805, Alcalá de Henares, Madrid, Spain
| | - María-Elena Pérez
- Departamento de Química Orgánica y Química Inorgánica, Universidad de Alcalá, 28805, Alcalá de Henares, Madrid, Spain
| | - María-Selma Arias-Pérez
- Departamento de Química Orgánica y Química Inorgánica, Universidad de Alcalá, 28805, Alcalá de Henares, Madrid, Spain.
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7
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Cai J, Hu J, Qin C, Li L, Shen D, Tian G, Zou X, Seeberger PH, Yin J. Chemical Synthesis Elucidates the Key Antigenic Epitope of the Autism‐Related Bacterium
Clostridium bolteae
Capsular Octadecasaccharide. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202007209] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Juntao Cai
- Key Laboratory of Carbohydrate Chemistry and Biotechnology Ministry of Education School of Biotechnology Jiangnan University Lihu Avenue 1800 Wuxi Jiangsu Province 214122 P. R. China
- Department of Biomolecular Systems Max Planck Institute of Colloids and Interfaces Am Mühlenberg 1 14476 Potsdam Germany
| | - Jing Hu
- Key Laboratory of Carbohydrate Chemistry and Biotechnology Ministry of Education School of Biotechnology Jiangnan University Lihu Avenue 1800 Wuxi Jiangsu Province 214122 P. R. China
- Wuxi School of Medicine Jiangnan University Lihu Avenue 1800 Wuxi Jiangsu Province 214122 P. R. China
| | - Chunjun Qin
- Key Laboratory of Carbohydrate Chemistry and Biotechnology Ministry of Education School of Biotechnology Jiangnan University Lihu Avenue 1800 Wuxi Jiangsu Province 214122 P. R. China
| | - Lingxin Li
- Key Laboratory of Carbohydrate Chemistry and Biotechnology Ministry of Education School of Biotechnology Jiangnan University Lihu Avenue 1800 Wuxi Jiangsu Province 214122 P. R. China
| | - Dacheng Shen
- Department of Biomolecular Systems Max Planck Institute of Colloids and Interfaces Am Mühlenberg 1 14476 Potsdam Germany
| | - Guangzong Tian
- Key Laboratory of Carbohydrate Chemistry and Biotechnology Ministry of Education School of Biotechnology Jiangnan University Lihu Avenue 1800 Wuxi Jiangsu Province 214122 P. R. China
- Department of Biomolecular Systems Max Planck Institute of Colloids and Interfaces Am Mühlenberg 1 14476 Potsdam Germany
| | - Xiaopeng Zou
- Key Laboratory of Carbohydrate Chemistry and Biotechnology Ministry of Education School of Biotechnology Jiangnan University Lihu Avenue 1800 Wuxi Jiangsu Province 214122 P. R. China
- Department of Biomolecular Systems Max Planck Institute of Colloids and Interfaces Am Mühlenberg 1 14476 Potsdam Germany
| | - Peter H. Seeberger
- Department of Biomolecular Systems Max Planck Institute of Colloids and Interfaces Am Mühlenberg 1 14476 Potsdam Germany
| | - Jian Yin
- Key Laboratory of Carbohydrate Chemistry and Biotechnology Ministry of Education School of Biotechnology Jiangnan University Lihu Avenue 1800 Wuxi Jiangsu Province 214122 P. R. China
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8
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Zhu Y, Tyrikos-Ergas T, Schiefelbein K, Grafmüller A, Seeberger PH, Delbianco M. Automated access to well-defined ionic oligosaccharides. Org Biomol Chem 2020; 18:1349-1353. [PMID: 32037424 DOI: 10.1039/d0ob00137f] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Ionic polysaccharides are part of many biological events, but lack structural characterisation due to challenging purifications and complex synthesis. Four monosaccharides bearing modifications not found in nature are used for the automated synthesis of a collection of ionic oligosaccharides. Structural analysis reveals how the charge pattern affects glycan conformation.
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Affiliation(s)
- Yuntao Zhu
- Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany.
| | - Theodore Tyrikos-Ergas
- Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany. and Department of Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 22, 14195 Berlin, Germany
| | - Kevin Schiefelbein
- Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany.
| | - Andrea Grafmüller
- Department of Theory, Max-Planck-Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany
| | - Peter H Seeberger
- Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany. and Department of Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 22, 14195 Berlin, Germany
| | - Martina Delbianco
- Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476 Potsdam, Germany.
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9
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Cai J, Hu J, Qin C, Li L, Shen D, Tian G, Zou X, Seeberger PH, Yin J. Chemical Synthesis Elucidates the Key Antigenic Epitope of the Autism-Related Bacterium Clostridium bolteae Capsular Octadecasaccharide. Angew Chem Int Ed Engl 2020; 59:20529-20537. [PMID: 32734715 DOI: 10.1002/anie.202007209] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2020] [Revised: 07/13/2020] [Indexed: 12/20/2022]
Abstract
The gut pathogen Clostridium bolteae has been associated with the onset of autism spectrum disorder (ASD). To create vaccines against C. bolteae, it is important to identify exact protective epitopes of the immunologically active capsular polysaccharide (CPS). Here, a series of C. bolteae CPS glycans, up to an octadecasaccharide, was prepared. Key to achieving the total syntheses is a [2+2] coupling strategy based on a β-d-Rhap-(1→3)-α-d-Manp repeating unit that in turn was accessed by a stereoselective β-d-rhamnosylation. The 4,6-O-benzylidene-induced conformational locking is a powerful strategy for forming a β-d-mannose-type glycoside. An indirect strategy based on C2 epimerization of β-d-quinovoside was efficiently achieved by Swern oxidation and borohydride reduction. Sequential glycosylation, and regioselective and global deprotection produced the disaccharide and tetrasaccharide, up to the octadecasaccharide. Glycan microarray analysis of sera from rabbits immunized with inactivated C. bolteae bacteria revealed a humoral immune response to the di- and tetrasaccharide, but none of the longer sequences. The tetrasaccharide may be a key motif for designing glycoconjugate vaccines against C. bolteae.
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Affiliation(s)
- Juntao Cai
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Lihu Avenue 1800, Wuxi, Jiangsu Province, 214122, P. R. China.,Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476, Potsdam, Germany
| | - Jing Hu
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Lihu Avenue 1800, Wuxi, Jiangsu Province, 214122, P. R. China.,Wuxi School of Medicine, Jiangnan University, Lihu Avenue 1800, Wuxi, Jiangsu Province, 214122, P. R. China
| | - Chunjun Qin
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Lihu Avenue 1800, Wuxi, Jiangsu Province, 214122, P. R. China
| | - Lingxin Li
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Lihu Avenue 1800, Wuxi, Jiangsu Province, 214122, P. R. China
| | - Dacheng Shen
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476, Potsdam, Germany
| | - Guangzong Tian
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Lihu Avenue 1800, Wuxi, Jiangsu Province, 214122, P. R. China.,Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476, Potsdam, Germany
| | - Xiaopeng Zou
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Lihu Avenue 1800, Wuxi, Jiangsu Province, 214122, P. R. China.,Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476, Potsdam, Germany
| | - Peter H Seeberger
- Department of Biomolecular Systems, Max Planck Institute of Colloids and Interfaces, Am Mühlenberg 1, 14476, Potsdam, Germany
| | - Jian Yin
- Key Laboratory of Carbohydrate Chemistry and Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Lihu Avenue 1800, Wuxi, Jiangsu Province, 214122, P. R. China
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10
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Izumi S, Kobayashi Y, Takemoto Y. Stereoselective Synthesis of 1,1′‐Disaccharides by Organoboron Catalysis. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202004476] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Sanae Izumi
- Graduate School of Pharmaceutical Sciences Kyoto University 46-29 Shimoadachi-cho, Yoshida, Sakyo-ku Kyoto 606-8501 Japan
| | - Yusuke Kobayashi
- Graduate School of Pharmaceutical Sciences Kyoto University 46-29 Shimoadachi-cho, Yoshida, Sakyo-ku Kyoto 606-8501 Japan
| | - Yoshiji Takemoto
- Graduate School of Pharmaceutical Sciences Kyoto University 46-29 Shimoadachi-cho, Yoshida, Sakyo-ku Kyoto 606-8501 Japan
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11
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Stereoselective Synthesis of 1,1′‐Disaccharides by Organoboron Catalysis. Angew Chem Int Ed Engl 2020; 59:14054-14059. [DOI: 10.1002/anie.202004476] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2020] [Indexed: 12/12/2022]
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12
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Thota N, Björkling F, Kankala S. Triphenylcarbenium Tetrafluoroborate as an Efficient Catalyst in the Regioselective Reductive Ring Opening of Benzylidene Acetals of Carbohydrates. ChemistrySelect 2019. [DOI: 10.1002/slct.201901795] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Affiliation(s)
- Niranjan Thota
- Department of Drug Design and PharmacologyFaculty of Health and Medical SciencesUniversity of Copenhagen Universitetsparken 2 DK-2100 Denmark
| | - Fredrik Björkling
- Department of Drug Design and PharmacologyFaculty of Health and Medical SciencesUniversity of Copenhagen Universitetsparken 2 DK-2100 Denmark
| | - Shravankumar Kankala
- Department of ChemistryKakatiya University Warangal- 506009, Telangana State India
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13
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Vucko T, Pellegrini Moïse N, Lamandé-Langle S. Value-added carbohydrate building blocks by regioselective O-alkylation of C-glucosyl compounds. Carbohydr Res 2019; 477:1-10. [DOI: 10.1016/j.carres.2019.03.008] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2019] [Revised: 03/19/2019] [Accepted: 03/19/2019] [Indexed: 10/27/2022]
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14
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Mukherjee MM, Basu N, Nandi S, Ghosh R. A metal free mild and green approach for tandem opening of 4,6-O-benzylidene acetals to their corresponding 6-O-acetyl derivatives: Application in the synthesis of a trisaccharide using one-pot glycosylation reactions. Carbohydr Res 2019; 476:36-43. [PMID: 30889504 DOI: 10.1016/j.carres.2019.03.002] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2019] [Revised: 03/04/2019] [Accepted: 03/04/2019] [Indexed: 10/27/2022]
Abstract
An efficient and high yielding reaction for tandem opening of 4,6-O-benzylidene derivatives (gluco, galacto, manno, 2-phthalimido-2-deoxy glucosides) to their corresponding 6-O-acetyl derivatives has been established under metal free condition using 60% solution of aqueous acetic acid (v/v). The reaction is equally pertinent for large scale synthesis and also for disaccharide glycosides. Its application for the construction of a building block towards synthesis of a trisaccharide part related to Pseudomonas aeruginosa utilizing one-pot glycosylation reactions has also been described.
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Affiliation(s)
- Mana Mohan Mukherjee
- Department of Chemistry, Jadavpur University, Jadavpur, Kolkata, 700032, West Bengal, India
| | - Nabamita Basu
- Department of Chemistry, Nabagram Hiralal Paul College, Konnagar, Hoogly, West Bengal, 712246, India
| | - Shantanu Nandi
- Department of Chemistry, Jadavpur University, Jadavpur, Kolkata, 700032, West Bengal, India
| | - Rina Ghosh
- Department of Chemistry, Jadavpur University, Jadavpur, Kolkata, 700032, West Bengal, India.
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15
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Synthesis of 3′-fluoro-4′-amino-hexitol nucleosides with a pyrimidine nucleobase as building blocks for oligonucleotides. Tetrahedron 2019. [DOI: 10.1016/j.tet.2019.01.026] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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16
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Dimakos V, Taylor MS. Site-Selective Functionalization of Hydroxyl Groups in Carbohydrate Derivatives. Chem Rev 2018; 118:11457-11517. [DOI: 10.1021/acs.chemrev.8b00442] [Citation(s) in RCA: 148] [Impact Index Per Article: 24.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Victoria Dimakos
- Department of Chemistry, University of Toronto, 80 St. George Street, Toronto, ON M5S 3H6, Canada
| | - Mark S. Taylor
- Department of Chemistry, University of Toronto, 80 St. George Street, Toronto, ON M5S 3H6, Canada
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17
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Janssens J, Risseeuw MDP, Van der Eycken J, Van Calenbergh S. Regioselective Ring Opening of 1,3-Dioxane-Type Acetals in Carbohydrates. European J Org Chem 2018. [DOI: 10.1002/ejoc.201801245] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Jonas Janssens
- Laboratory for Medicinal Chemistry; Department of Pharmaceutics (FFW); Ghent University; Ottergemsesteenweg 460 9000 Ghent Belgium
- Laboratory for Organic and Bioorganic Synthesis; Department of Organic and Macromolecular Chemistry; Ghent University; Krijgslaan 281 (S4) 9000 Ghent Belgium
| | - Martijn D. P. Risseeuw
- Laboratory for Medicinal Chemistry; Department of Pharmaceutics (FFW); Ghent University; Ottergemsesteenweg 460 9000 Ghent Belgium
| | - Johan Van der Eycken
- Laboratory for Organic and Bioorganic Synthesis; Department of Organic and Macromolecular Chemistry; Ghent University; Krijgslaan 281 (S4) 9000 Ghent Belgium
| | - Serge Van Calenbergh
- Laboratory for Medicinal Chemistry; Department of Pharmaceutics (FFW); Ghent University; Ottergemsesteenweg 460 9000 Ghent Belgium
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18
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Lu YJ, Lai YH, Lin YY, Wang YC, Liang PH. 2- O- N-Benzylcarbamoyl as a Protecting Group To Promote β-Selective Glycosylation and Its Applications in the Stereoselective Synthesis of Oligosaccharides. J Org Chem 2018; 83:3688-3701. [PMID: 29512381 DOI: 10.1021/acs.joc.8b00047] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
This study examines the utility of the N-benzylcarbamoyl (BnCar) protecting group in glycosylation reactions of the parent O-2 protected carbohydrate donor. It was found that the BnCar group imparted exclusively β-selectivity with primary and secondary alcohols. A mechanistic study revealed the activated intermediate to be the glycosyl triflate in a skew conformation, which results in β-selective glycosylation via an SN2-like pathway. The BnCar group can be readily cleaved using tetrabutylammonium nitrite, without affecting ester and ether protecting groups. Taken together, these results show BnCar to be useful for the synthesis of complex oligosaccharides, an undertaking that requires delicate chemical differentiation of various protecting groups.
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Affiliation(s)
- Yin-Jen Lu
- School of Pharmacy, College of Medicine , National Taiwan University , Taipei 100 , Taiwan
| | - Yen-Hsun Lai
- School of Pharmacy, College of Medicine , National Taiwan University , Taipei 100 , Taiwan
| | - You-Yu Lin
- School of Pharmacy, College of Medicine , National Taiwan University , Taipei 100 , Taiwan
| | - Yi-Chi Wang
- School of Pharmacy, College of Medicine , National Taiwan University , Taipei 100 , Taiwan
| | - Pi-Hui Liang
- School of Pharmacy, College of Medicine , National Taiwan University , Taipei 100 , Taiwan
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19
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Brumsted CJ, Carpenter EL, Indra AK, Mahmud T. Asymmetric Synthesis and Biological Activities of Pactamycin-Inspired Aminocyclopentitols. Org Lett 2018; 20:397-400. [DOI: 10.1021/acs.orglett.7b03681] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Corey J. Brumsted
- Department
of Chemistry and ‡Department of Pharmaceutical Sciences, Oregon State University, Corvallis, Oregon 97333, United States
| | | | | | - Taifo Mahmud
- Department
of Chemistry and ‡Department of Pharmaceutical Sciences, Oregon State University, Corvallis, Oregon 97333, United States
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20
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21
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Banerjee A, Senthilkumar S, Baskaran S. Benzylidene Acetal Protecting Group as Carboxylic Acid Surrogate: Synthesis of Functionalized Uronic Acids and Sugar Amino Acids. Chemistry 2015; 22:902-6. [PMID: 26572799 DOI: 10.1002/chem.201503998] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2015] [Indexed: 02/05/2023]
Abstract
Direct oxidation of the 4,6-O-benzylidene acetal protecting group to C-6 carboxylic acid has been developed that provides an easy access to a wide range of biologically important and synthetically challenging uronic acid and sugar amino acid derivatives in good yields. The RuCl3 -NaIO4 -mediated oxidative cleavage method eliminates protection and deprotection steps and the reaction takes place under mild conditions. The dual role of the benzylidene acetal, as a protecting group and source of carboxylic acid, was exploited in the efficient synthesis of six-carbon sialic acid analogues and disaccharides bearing uronic acids, including glycosaminoglycan analogues.
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Affiliation(s)
- Amit Banerjee
- Department of Chemistry, Indian Institute of Technology Madras, Chennai-, 600036, India
| | | | - Sundarababu Baskaran
- Department of Chemistry, Indian Institute of Technology Madras, Chennai-, 600036, India.
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22
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Poh ZW, Gan CH, Lee EJ, Guo S, Yip GW, Lam Y. Divergent Synthesis of Chondroitin Sulfate Disaccharides and Identification of Sulfate Motifs that Inhibit Triple Negative Breast Cancer. Sci Rep 2015; 5:14355. [PMID: 26400608 PMCID: PMC5155627 DOI: 10.1038/srep14355] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2015] [Accepted: 08/24/2015] [Indexed: 01/21/2023] Open
Abstract
Glycosaminoglycans (GAGs) regulate many important physiological processes. A pertinent issue to address is whether GAGs encode important functional information via introduction of position specific sulfate groups in the GAG structure. However, procurement of pure, homogenous GAG motifs to probe the “sulfation code” is a challenging task due to isolation difficulty and structural complexity. To this end, we devised a versatile synthetic strategy to obtain all the 16 theoretically possible sulfation patterns in the chondroitin sulfate (CS) repeating unit; these include rare but potentially important sulfated motifs which have not been isolated earlier. Biological evaluation indicated that CS sulfation patterns had differing effects for different breast cancer cell types, and the greatest inhibitory effect was observed for the most aggressive, triple negative breast cancer cell line MDA-MB-231.
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Affiliation(s)
- Zhong Wei Poh
- Department of Chemistry, National University of Singapore (NUS), Singapore.,NUS Graduate School for Integrative Sciences and Engineering (NGS), Singapore
| | - Chin Heng Gan
- Department of Chemistry, National University of Singapore (NUS), Singapore
| | - Eric J Lee
- Department of Chemistry, National University of Singapore (NUS), Singapore
| | - Suxian Guo
- Department of Anatomy, National University of Singapore (NUS), Singapore
| | - George W Yip
- Department of Anatomy, National University of Singapore (NUS), Singapore
| | - Yulin Lam
- Department of Chemistry, National University of Singapore (NUS), Singapore.,NUS Graduate School for Integrative Sciences and Engineering (NGS), Singapore
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23
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Herczeg M, Demeter F, Mező E, Pap M, Borbás A. Simultaneous Application of Arylmethylene Acetal and Butane Diacetal Groups for Protection of Hexopyranosides: Synthesis and Chemoselective Ring-Opening Reactions. European J Org Chem 2015. [DOI: 10.1002/ejoc.201500732] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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24
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Wakao M, Obata R, Miyachi K, Kaitsubata Y, Kondo T, Sakami C, Suda Y. Synthesis of a chondroitin sulfate disaccharide library and a GAG-binding protein interaction analysis. Bioorg Med Chem Lett 2015; 25:1407-11. [PMID: 25765912 DOI: 10.1016/j.bmcl.2015.02.054] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2014] [Revised: 02/16/2015] [Accepted: 02/20/2015] [Indexed: 11/30/2022]
Abstract
Chondroitin sulfate (CS), which belongs to the glycosaminoglycan (GAG) superfamily, is a linear sulfated polysaccharide involved in various biological processes. CS structure is very heterogeneous and contains various sulfation patterns owing to the multiple and random enzymatic modifications that occur during its biosynthesis. The resultant microdomain structure in the CS chain interacts with specific biomolecules to regulate biological functions. Therefore, an analysis of the structure-activity relationship of CS at the molecular level is necessary to clarify their biofunctions. In this study, we designed the common intermediate possessing an orthogonally removable protective group and systematically synthesized all 16 types of CS disaccharide structure generated by sulfation. In addition, we demonstrated the on-time analysis of the binding properties of GAG-binding proteins using 'Sugar Chip' immobilized CS disaccharide structures by surface plasmon resonance (SPR) imaging, indicating that our chip technology is effective for the evaluation of binding properties.
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Affiliation(s)
- Masahiro Wakao
- Department of Chemistry, Biotechnology, and Chemical Engineering, Graduate School of Science and Engineering, Kagoshima University, 1-21-40 Korimoto, Kagoshima 890-0065, Japan.
| | - Rumi Obata
- Department of Chemistry, Biotechnology, and Chemical Engineering, Graduate School of Science and Engineering, Kagoshima University, 1-21-40 Korimoto, Kagoshima 890-0065, Japan
| | - Kento Miyachi
- Department of Chemistry, Biotechnology, and Chemical Engineering, Graduate School of Science and Engineering, Kagoshima University, 1-21-40 Korimoto, Kagoshima 890-0065, Japan
| | - Yuhei Kaitsubata
- Department of Chemistry, Biotechnology, and Chemical Engineering, Graduate School of Science and Engineering, Kagoshima University, 1-21-40 Korimoto, Kagoshima 890-0065, Japan
| | - Takao Kondo
- Department of Chemistry, Biotechnology, and Chemical Engineering, Graduate School of Science and Engineering, Kagoshima University, 1-21-40 Korimoto, Kagoshima 890-0065, Japan
| | - Chiho Sakami
- Department of Chemistry, Biotechnology, and Chemical Engineering, Graduate School of Science and Engineering, Kagoshima University, 1-21-40 Korimoto, Kagoshima 890-0065, Japan
| | - Yasuo Suda
- Department of Chemistry, Biotechnology, and Chemical Engineering, Graduate School of Science and Engineering, Kagoshima University, 1-21-40 Korimoto, Kagoshima 890-0065, Japan; SUDx-Biotec Corporation, 1-41-1 Shiroyama, Kagoshima 890-0013, Japan.
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25
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Mezaache R, Harkat H, Obszynski J, Benkouider A, Blanc A, Weibel JM, Pale P. Copper(II) bromide as an efficient catalyst for acetal to bisarylmethyl ether interconversion. Tetrahedron Lett 2014. [DOI: 10.1016/j.tetlet.2014.10.115] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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26
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Tamigney Kenfack M, Blériot Y, Gauthier C. Intramolecular Aglycon Delivery Enables the Synthesis of 6-Deoxy-β-d-manno-heptosides as Fragments of Burkholderia pseudomallei and Burkholderia mallei Capsular Polysaccharide. J Org Chem 2014; 79:4615-34. [DOI: 10.1021/jo500640n] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Marielle Tamigney Kenfack
- Université de Poitiers, Institut de Chimie IC2MP, UMR-CNRS 7285, Équipe Synthèse Organique, 4 rue Michel
Brunet, 86073 Poitiers, France
| | - Yves Blériot
- Université de Poitiers, Institut de Chimie IC2MP, UMR-CNRS 7285, Équipe Synthèse Organique, 4 rue Michel
Brunet, 86073 Poitiers, France
| | - Charles Gauthier
- Université de Poitiers, Institut de Chimie IC2MP, UMR-CNRS 7285, Équipe Synthèse Organique, 4 rue Michel
Brunet, 86073 Poitiers, France
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27
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Schumann B, Pragani R, Anish C, Pereira CL, Seeberger PH. Synthesis of conjugation-ready zwitterionic oligosaccharides by chemoselective thioglycoside activation. Chem Sci 2014. [DOI: 10.1039/c3sc53362j] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
A method to chemoselectively activate thioglycosides in the presence of thioethers is developed and applied in the total synthesis of repeating units of S. pneumoniae Sp1 and B. fragilis PS A1. Biochemical evaluation of these glycans is performed after conjugation to reporter moieties.
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Affiliation(s)
- B. Schumann
- Max Planck Institute of Colloids and Interfaces
- 14424 Potsdam, Germany
- Freie Universität Berlin
- 14195 Berlin, Germany
| | - R. Pragani
- Max Planck Institute of Colloids and Interfaces
- 14424 Potsdam, Germany
| | - C. Anish
- Max Planck Institute of Colloids and Interfaces
- 14424 Potsdam, Germany
| | - C. L. Pereira
- Max Planck Institute of Colloids and Interfaces
- 14424 Potsdam, Germany
| | - P. H. Seeberger
- Max Planck Institute of Colloids and Interfaces
- 14424 Potsdam, Germany
- Freie Universität Berlin
- 14195 Berlin, Germany
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28
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Majumdar S, Chakraborty M, Maiti DK, Chowdhury S, Hossain J. Activation of 1,3-dioxolane by a protic ionic liquid in aqueous media: a green strategy for the selective hydrolytic cleavage of acetals and ketals. RSC Adv 2014. [DOI: 10.1039/c4ra00870g] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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29
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Manabe S, Ito Y. Hafnium(IV) tetratriflate in selective reductive carbohydrate benzylidene acetal opening reaction and direct silylation reaction. Tetrahedron Lett 2013. [DOI: 10.1016/j.tetlet.2013.10.011] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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30
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Tatina M, Yousuf SK, Aravinda S, Singh B, Mukherjee D. Cyanuric chloride/sodium borohydride: a new reagent combination for reductive opening of 4,6-benzylidene acetals of carbohydrates to primary alcohols. Carbohydr Res 2013; 381:142-5. [DOI: 10.1016/j.carres.2013.09.003] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2013] [Revised: 09/05/2013] [Accepted: 09/06/2013] [Indexed: 11/27/2022]
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31
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Santra A, Ghosh T, Misra AK. Removal of benzylidene acetal and benzyl ether in carbohydrate derivatives using triethylsilane and Pd/C. Beilstein J Org Chem 2013; 9:74-8. [PMID: 23400301 PMCID: PMC3566760 DOI: 10.3762/bjoc.9.9] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2012] [Accepted: 12/17/2012] [Indexed: 11/23/2022] Open
Abstract
Clean deprotection of carbohydrate derivatives containing benzylidene acetals and benzyl ethers was achieved under catalytic transfer hydrogenation conditions by using a combination of triethylsilane and 10% Pd/C in CH3OH at room temperature. A variety of carbohydrate diol derivatives were prepared from their benzylidene derivatives in excellent yield.
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Affiliation(s)
- Abhishek Santra
- Bose Institute, Division of Molecular Medicine, P-1/12, C.I.T. Scheme VII-M, Kolkata-700054, India; FAX: 91-33-2355 3886
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32
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Mobarak H, Engström O, Widmalm G. Synthesis of methyl 3-amino-3,6-dideoxy-α-d-galactopyranoside carrying different amide substituents. RSC Adv 2013. [DOI: 10.1039/c3ra45092a] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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33
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Ekholm FS, Ardá A, Eklund P, André S, Gabius HJ, Jiménez-Barbero J, Leino R. Studies related to Norway spruce galactoglucomannans: chemical synthesis, conformation analysis, NMR spectroscopic characterization, and molecular recognition of model compounds. Chemistry 2012; 18:14392-405. [PMID: 23008171 DOI: 10.1002/chem.201200510] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2012] [Revised: 05/16/2012] [Indexed: 12/20/2022]
Abstract
Galactoglucomannan (GGM) is a polysaccharide mainly consisting of mannose, glucose, and galactose. GGM is the most abundant hemicellulose in the Norway spruce (Picea abies), but is also found in the cell wall of flax seeds, tobacco plants, and kiwifruit. Although several applications for GGM polysaccharides have been developed in pulp and paper manufacturing and the food and medical industries, attempts to synthesize and study distinct fragments of this polysaccharide have not been reported previously. Herein, the synthesis of one of the core trisaccharide units of GGM together with a less-abundant tetrasaccharide fragment is described. In addition, detailed NMR spectroscopic characterization of the model compounds, comparison of the spectral data with natural GGM, investigation of the acetyl-group migration phenomena that takes place in the polysaccharide by using small model compounds, and a binding study between the tetrasaccharide model fragment and a galactose-binding protein (the toxin viscumin) are reported.
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Affiliation(s)
- Filip S Ekholm
- Laboratory of Organic Chemistry, Åbo Akademi University, Piispankatu 8, 20500 Åbo, Finland
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34
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Zhang YJ, Dayoub W, Chen GR, Lemaire M. TMDS as a Dual-Purpose Reductant in the Regioselective Ring Cleavage of Hexopyranosyl Acetals to Ethers. European J Org Chem 2012. [DOI: 10.1002/ejoc.201101682] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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35
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Hsu CY, Lee IC, Lico LS, Uang BJ, Hung SC. Synthesis of a Furanosyl-pyranone Derivative Related to the Tri-O-heterocyclic Core of Herbicidins. J CHIN CHEM SOC-TAIP 2012. [DOI: 10.1002/jccs.201100744] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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36
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Gampe CM, Tsukamoto H, Wang TSA, Walker S, Kahne D. Modular synthesis of diphospholipid oligosaccharide fragments of the bacterial cell wall and their use to study the mechanism of moenomycin and other antibiotics. Tetrahedron 2011; 67:9771-9778. [PMID: 22505780 PMCID: PMC3322638 DOI: 10.1016/j.tet.2011.09.114] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We present a flexible, modular route to GlcNAc-MurNAc-oligosaccharides that can be readily converted into peptidoglycan (PG) fragments to serve as reagents for the study of bacterial enzymes that are targets for antibiotics. Demonstrating the utility of these synthetic PG substrates, we show that the tetrasaccharide substrate lipid IV (3), but not the disaccharide substrate lipid II (2), significantly increases the concentration of moenomycin A required to inhibit a prototypical PG-glycosyltransferase (PGT). These results imply that lipid IV and moenomycin A bind to the same site on the enzyme. We also show the moenomycin A inhibits the formation of elongated polysaccharide product but does not affect length distribution. We conclude that moenomycin A blocks PG-strand initiation rather than elongation or chain termination. Synthetic access to diphospholipid oligosaccharides will enable further studies of bacterial cell wall synthesis with the long-term goal of identifying novel antibiotics.
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Affiliation(s)
- Christian M. Gampe
- Harvard University, Department of Chemistry and Chemical Biology, 12 Oxford Street, Cambridge, Massachusetts 02138, USA
| | - Hirokazu Tsukamoto
- Harvard University, Department of Chemistry and Chemical Biology, 12 Oxford Street, Cambridge, Massachusetts 02138, USA
| | - Tsung-Shing Andrew Wang
- Harvard University, Department of Chemistry and Chemical Biology, 12 Oxford Street, Cambridge, Massachusetts 02138, USA
| | - Suzanne Walker
- Harvard Medical School, Department of Microbiology and Molecular Genetics, Boston, Massachusetts 02115, USA
| | - Daniel Kahne
- Harvard University, Department of Chemistry and Chemical Biology, 12 Oxford Street, Cambridge, Massachusetts 02138, USA
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37
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Ring cleavage reactions of methyl α-D-allopyranoside derivatives with phenylboron dichloride and triethylsilane. MOLECULES (BASEL, SWITZERLAND) 2011; 16:10303-13. [PMID: 22158683 PMCID: PMC6264258 DOI: 10.3390/molecules161210303] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/31/2011] [Revised: 11/25/2011] [Accepted: 12/05/2011] [Indexed: 11/17/2022]
Abstract
In the course of our studies on the regioselective carbon-oxygen bond cleavage of the benzylidene acetal group of hexopyranosides with a reducing agent, we found that a combination of a Lewis acid and a reducing agent triggered a ring-opening reaction of the pyranose ring of methyl α-D-allopyranosides. The formation of an acyclic boronate ester by the attachment of a hydride ion at C-1 indicated that the unexpected endocyclic cleavage of the bond between the anomeric carbon atom and the pyranose ring oxygen atom proceeded via an oxacarbenium ion intermediate produced by the chelation between O5/O6 of the pyranoside and the Lewis acid, followed by nucleophile substitution with a hydride ion at C1.
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38
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Jalsa NK. Regioselective removal of the anomeric O-benzyl from differentially protected carbohydrates. Tetrahedron Lett 2011. [DOI: 10.1016/j.tetlet.2011.09.130] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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