1
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Jin Z, Jiang L, He Q. Critical learning from industrial catalysis for nanocatalytic medicine. Nat Commun 2024; 15:3857. [PMID: 38719843 PMCID: PMC11079063 DOI: 10.1038/s41467-024-48319-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2023] [Accepted: 04/26/2024] [Indexed: 05/12/2024] Open
Abstract
Systematical and critical learning from industrial catalysis will bring inspiration for emerging nanocatalytic medicine, but the relevant knowledge is quite limited so far. In this review, we briefly summarize representative catalytic reactions and corresponding catalysts in industry, and then distinguish the similarities and differences in catalytic reactions between industrial and medical applications in support of critical learning, deep understanding, and rational designing of appropriate catalysts and catalytic reactions for various medical applications. Finally, we summarize/outlook the present and potential translation from industrial catalysis to nanocatalytic medicine. This review is expected to display a clear picture of nanocatalytic medicine evolution.
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Affiliation(s)
- Zhaokui Jin
- Medical Center on Aging, Ruijin Hospital; Shanghai Key Laboratory of Hydrogen Science & Center of Hydrogen Science, School of Materials Science and Engineering, Shanghai Jiao Tong University, Shanghai, 200240, China
- School of Biomedical Engineering, Guangzhou Medical University, Guangzhou, 510182, China
| | - Lingdong Jiang
- College of Pharmacy, Shenzhen Technology University, Shenzhen, 518118, China
| | - Qianjun He
- Medical Center on Aging, Ruijin Hospital; Shanghai Key Laboratory of Hydrogen Science & Center of Hydrogen Science, School of Materials Science and Engineering, Shanghai Jiao Tong University, Shanghai, 200240, China.
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2
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Duchemin N, Aubert S, de Souza JV, Bethge L, Vonhoff S, Bronowska AK, Smietana M, Arseniyadis S. New Benchmark in DNA-Based Asymmetric Catalysis: Prevalence of Modified DNA/RNA Hybrid Systems. JACS AU 2022; 2:1910-1917. [PMID: 36032523 PMCID: PMC9400053 DOI: 10.1021/jacsau.2c00271] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/04/2022] [Revised: 06/27/2022] [Accepted: 07/22/2022] [Indexed: 06/15/2023]
Abstract
By harnessing the chirality of the DNA double helix, chemists have been able to obtain new, reliable, selective, and environmentally friendly biohybrid catalytic systems with tailor-made functions. Nonetheless, despite all the advances made throughout the years in the field of DNA-based asymmetric catalysis, many challenges still remain to be faced, in particular when it comes to designing a "universal" catalyst with broad reactivity and unprecedented selectivity. Rational design and rounds of selection have allowed us to approach this goal. We report here the development of a DNA/RNA hybrid catalytic system featuring a covalently attached bipyridine ligand, which exhibits unmatched levels of selectivity throughout the current DNA toolbox and opens new avenues in asymmetric catalysis.
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Affiliation(s)
- Nicolas Duchemin
- Queen
Mary University of London, Department of Chemistry, Mile End Road, London E1 4NS, United
Kingdom
- NOXXON
Pharma AG, Max-Dohrn-Strasse 8-10, Berlin 10589, Germany
| | - Sidonie Aubert
- Queen
Mary University of London, Department of Chemistry, Mile End Road, London E1 4NS, United
Kingdom
| | - João V. de Souza
- Chemistry−School
of Natural and Environmental Sciences, Newcastle
University, Newcastle NE1 7RU, United Kingdom
| | - Lucas Bethge
- NOXXON
Pharma AG, Max-Dohrn-Strasse 8-10, Berlin 10589, Germany
| | - Stefan Vonhoff
- NOXXON
Pharma AG, Max-Dohrn-Strasse 8-10, Berlin 10589, Germany
| | - Agnieszka K. Bronowska
- Chemistry−School
of Natural and Environmental Sciences, Newcastle
University, Newcastle NE1 7RU, United Kingdom
| | - Michael Smietana
- Institut
des Biomolécules Max Mousseron, Université
de Montpellier, CNRS, ENSCM, 1919 Route de Mende, Montpellier 34095, France
| | - Stellios Arseniyadis
- Queen
Mary University of London, Department of Chemistry, Mile End Road, London E1 4NS, United
Kingdom
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3
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Shahraki S. Schiff base compounds as artificial metalloenzymes. Colloids Surf B Biointerfaces 2022; 218:112727. [PMID: 35921691 DOI: 10.1016/j.colsurfb.2022.112727] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Revised: 07/19/2022] [Accepted: 07/24/2022] [Indexed: 11/16/2022]
Abstract
Much research has been done on traditional homogeneous metal catalysts and enzymatic catalysts, but recently a new class of hybrid catalysts called synthetic (artificial) metalloenzymes has been considered by researchers. Metalloenzymes as hybrid catalysts (host-guest systems) have been shown that combine the properties of a homogeneous and also enzymatic catalyst. The hybrid catalyst will have added value such as enantioselectivity or chemo-selectivity. This review focuses on Schiff base complexes that either act as homogeneous artificial enzymes or contribute to the structure of a host in the preparation of hybrid metalloenzymes. Because this approach can virtually be applied to any bio- or synthetic host or guest coordination complex, the details of hybrid catalysts seem important for advance in catalysis.
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4
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The nitric oxide pathway is involved in the anti-inflammatory effect of the rutheniumcomplex [Ru(bpy)2(2-MIM)(NO)](PF6)3. Eur J Pharmacol 2022; 921:174869. [PMID: 35247379 DOI: 10.1016/j.ejphar.2022.174869] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2022] [Accepted: 02/28/2022] [Indexed: 12/15/2022]
Abstract
Metal coordination complexes are chemotherapeutic and anti-inflammatory agents. The ruthenium complex FOR811A ([Ru(bpy)2(2-MIM)Cl](PF6)3) FOR811A was evaluated in mice models of acute inflammation and behavioral tests. Animals received FOR811A (3, 10 or 30 mg/Kg; i.p.), indomethacin (20 mg/Kg; i.p.), L-NAME (20 mg/Kg; i.v.) aminoguanidine (50 mg/Kg; i.p.) or dexamethasone (0.5 mg/Kg; s.c.) 30 min before inflammatory stimulation. Paw edema was induced by carrageenan (400 μg/paw), TNF-α or L-arginine (15 nmol/paw) (5 ng/paw) and evaluated by hydroplestimometry 4 h later. Peritonitis was induced by carrageenan (500 μg; i.p.) and evaluated 4 h later for hypernociception and quantification of total/differential leukocytes, total protein reduced glutathione (GSH) and myeloperoxidase (MPO). FOR811A inhibited the paw edema induced by carrageenan at 3 (64%; p < 0.0001), 10 (73%; p < 0.0001) and 30 mg/kg (66%; p < 0.0001), and at 10 mg/kg that induced with L-arginine by 75% or TNF-α by 55% (p = 0.0012). Paw tissues histological analysis showed reduction in mast cells (46%; p = 0.0027), leukocyte infiltrate (66%; p < 0.0001), edema and hemorrhagic areas. Immunohistochemical evaluation revealed inhibition of iNOS (62%; p < 0.0001) and TNF-α (35%; p < 0.0001). In the peritonitis model FOR811A increased (2.8X; p < 0.0001) hypernociceptive threshold, reduced total leukocytes (29%; p < 0.0001), neutrophils (47%; p = 0.0003) and total proteins (36%; p = 0.0082). FOR811A also inhibited MPO (47%; p = 0.0296) and increased GSH (1.8X; p < 0.0001). In the behavioral tests, FOR811A reduced (30.6%) the number of crossings in the open field, and increased (16%) the number of falls in the Rota rod. Concluding, FOR811A presents anti-inflammatory and antioxidant effects, via nitric oxide pathway.
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5
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Veni, Vidi, Vici: Immobilized Peptide-Based Conjugates as Tools for Capture, Analysis, and Transformation. CHEMOSENSORS 2022. [DOI: 10.3390/chemosensors10010031] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Analysis of peptide biomarkers of pathological states of the organism is often a serious challenge, due to a very complex composition of the cell and insufficient sensitivity of the current analytical methods (including mass spectrometry). One of the possible ways to overcome this problem is sample enrichment by capturing the selected components using a specific solid support. Another option is increasing the detectability of the desired compound by its selective tagging. Appropriately modified and immobilized peptides can be used for these purposes. In addition, they find application in studying the specificity and activity of proteolytic enzymes. Immobilized heterocyclic peptide conjugates may serve as metal ligands, to form complexes used as catalysts or analytical markers. In this review, we describe various applications of immobilized peptides, including selective capturing of cysteine-containing peptides, tagging of the carbonyl compounds to increase the sensitivity of their detection, enrichment of biological samples in deoxyfructosylated peptides, and fishing out of tyrosine–containing peptides by the formation of azo bond. Moreover, the use of the one-bead-one-compound peptide library for the analysis of substrate specificity and activity of caspases is described. Furthermore, the evolution of immobilization from the solid support used in peptide synthesis to nanocarriers is presented. Taken together, the examples presented here demonstrate immobilized peptides as a multifunctional tool, which can be successfully used to solve multiple analytical problems.
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6
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Zinc organocomplexes containing non-steroid anti-inflammatories and plane aromatic diimines: New potential drugs. Polyhedron 2021. [DOI: 10.1016/j.poly.2021.115449] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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7
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Lee H, Kim H, Lee SY. Self-Assembling Peptidic Bolaamphiphiles for Biomimetic Applications. ACS Biomater Sci Eng 2021; 7:3545-3572. [PMID: 34309378 DOI: 10.1021/acsbiomaterials.1c00576] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
Bolaamphiphile, which is a class of amphiphilic molecules, has a unique structure of two hydrophilic head groups at the ends of the hydrophobic center. Peptidic bolaamphiphiles that employ peptides or amino acids as their hydrophilic groups exhibit unique biochemical activities when they self-organize into supramolecular structures, which are not observed in a single molecule. The self-assembled peptidic bolaamphiphiles hold considerable promise for imitating proteins with biochemical activities, such as specific affinity toward heterogeneous substances, a catalytic activity similar to a metalloenzyme, physicochemical activity from harmonized amino acid segments, and the capability to encapsulate genes like a viral vector. These diverse activities give rise to large research interest in biomaterials engineering, along with the synthesis and characterization of the assembled structures. This review aims to address the recent progress in the applications of peptidic bolaamphiphile assemblies whose densely packed peptide motifs on their surface and their stacked hydrophobic centers exhibit unique protein-like activity and designer functionality, respectively.
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Affiliation(s)
- Hyesung Lee
- Department of Chemical and Biomolecular Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul 03722, Republic of Korea
| | - Hanbee Kim
- Department of Chemical and Biomolecular Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul 03722, Republic of Korea
| | - Sang-Yup Lee
- Department of Chemical and Biomolecular Engineering, Yonsei University, 50 Yonsei-ro, Seodaemun-gu, Seoul 03722, Republic of Korea
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8
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Thiel A, Sauer DF, Markel U, Mertens MAS, Polen T, Schwaneberg U, Okuda J. An artificial ruthenium-containing β-barrel protein for alkene-alkyne coupling reaction. Org Biomol Chem 2021; 19:2912-2916. [PMID: 33735355 DOI: 10.1039/d1ob00279a] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
A modified Cp*Ru complex, equipped with a maleimide group, was covalently attached to a cysteine of an engineered variant of Ferric hydroxamate uptake protein component: A (FhuA). This synthetic metalloprotein catalyzed the intermolecular alkene-alkyne coupling of 3-butenol with 5-hexynenitrile. When compared with the protein-free Cp*Ru catalyst, the biohybrid catalyst produced the linear product with higher regioselectivity.
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Affiliation(s)
- Andreas Thiel
- Institute of Inorganic Chemistry, RWTH Aachen University, Landoltweg 1, 52074 Aachen, Germany.
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9
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Sauer DF, Wittwer M, Markel U, Minges A, Spiertz M, Schiffels J, Davari MD, Groth G, Okuda J, Schwaneberg U. Chemogenetic engineering of nitrobindin toward an artificial epoxygenase. Catal Sci Technol 2021. [DOI: 10.1039/d1cy00609f] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Chemogenetic engineering turned the heme protein nitrobindin into an artificial epoxygenase: MnPPIX was introduced and subsequent protein engineering increased the activity in the epoxidation of styrene derivatives by overall 7-fold.
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Affiliation(s)
- Daniel F. Sauer
- Institute of Biotechnology
- RWTH Aachen University
- 52074 Aachen
- Germany
| | - Malte Wittwer
- Institute of Biotechnology
- RWTH Aachen University
- 52074 Aachen
- Germany
| | - Ulrich Markel
- Institute of Biotechnology
- RWTH Aachen University
- 52074 Aachen
- Germany
| | - Alexander Minges
- Institute of Biochemical Plant Physiology
- Heinrich Heine University Düsseldorf
- 40225 Düsseldorf
- Germany
| | - Markus Spiertz
- Institute of Biotechnology
- RWTH Aachen University
- 52074 Aachen
- Germany
| | | | - Mehdi D. Davari
- Institute of Biotechnology
- RWTH Aachen University
- 52074 Aachen
- Germany
| | - Georg Groth
- Institute of Biochemical Plant Physiology
- Heinrich Heine University Düsseldorf
- 40225 Düsseldorf
- Germany
| | - Jun Okuda
- Institute of Inorganic Chemistry
- RWTH Aachen University
- 52074 Aachen
- Germany
| | - Ulrich Schwaneberg
- Institute of Biotechnology
- RWTH Aachen University
- 52074 Aachen
- Germany
- DWI – Leibniz Institute for Interactive Materials
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10
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Mirzaei Garakani T, Sauer DF, Mertens MAS, Lazar J, Gehrmann J, Arlt M, Schiffels J, Schnakenberg U, Okuda J, Schwaneberg U. FhuA–Grubbs–Hoveyda Biohybrid Catalyst Embedded in a Polymer Film Enables Catalysis in Neat Substrates. ACS Catal 2020. [DOI: 10.1021/acscatal.0c03055] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
| | - Daniel F. Sauer
- Institute of Biotechnology, RWTH Aachen University, Worringerweg 3, 52074 Aachen, Germany
- Institute of Inorganic Chemistry, RWTH Aachen University, Landoltweg 1, 52074 Aachen, Germany
| | | | - Jaroslav Lazar
- Institute of Materials in Electrical Engineering 1, RWTH Aachen University, Sommerfeldstr. 24, 52074 Aachen, Germany
| | - Julia Gehrmann
- Institute of Biotechnology, RWTH Aachen University, Worringerweg 3, 52074 Aachen, Germany
| | - Marcus Arlt
- Institute of Biotechnology, RWTH Aachen University, Worringerweg 3, 52074 Aachen, Germany
| | - Johannes Schiffels
- Institute of Biotechnology, RWTH Aachen University, Worringerweg 3, 52074 Aachen, Germany
| | - Uwe Schnakenberg
- Institute of Materials in Electrical Engineering 1, RWTH Aachen University, Sommerfeldstr. 24, 52074 Aachen, Germany
| | - Jun Okuda
- Institute of Inorganic Chemistry, RWTH Aachen University, Landoltweg 1, 52074 Aachen, Germany
| | - Ulrich Schwaneberg
- Institute of Biotechnology, RWTH Aachen University, Worringerweg 3, 52074 Aachen, Germany
- DWI—Leibniz Institute for Interactive Materials, Forckenbeckstr. 50, D-52056 Aachen, Germany
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11
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Fujieda N, Ichihashi H, Yuasa M, Nishikawa Y, Kurisu G, Itoh S. Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202000129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Nobutaka Fujieda
- Department of Applied Life Sciences Graduate School of Life and Environmental Sciences Osaka Prefecture University 1-1 Gakuen-cho, Naka-ku, Sakai-shi Osaka 599-8531 Japan
| | - Haruna Ichihashi
- Department of Material and Life Science Graduate School of Engineering Osaka University 2-1 Yamada-oka, Suita Osaka 565-0871 Japan
| | - Miho Yuasa
- Department of Applied Life Sciences Graduate School of Life and Environmental Sciences Osaka Prefecture University 1-1 Gakuen-cho, Naka-ku, Sakai-shi Osaka 599-8531 Japan
| | - Yosuke Nishikawa
- Institute for Protein Research Osaka University 3-2 Yamada-oka, Suita Osaka 565-0871 Japan
| | - Genji Kurisu
- Institute for Protein Research Osaka University 3-2 Yamada-oka, Suita Osaka 565-0871 Japan
| | - Shinobu Itoh
- Department of Material and Life Science Graduate School of Engineering Osaka University 2-1 Yamada-oka, Suita Osaka 565-0871 Japan
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12
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Fujieda N, Ichihashi H, Yuasa M, Nishikawa Y, Kurisu G, Itoh S. Cupin Variants as a Macromolecular Ligand Library for Stereoselective Michael Addition of Nitroalkanes. Angew Chem Int Ed Engl 2020; 59:7717-7720. [PMID: 32073197 DOI: 10.1002/anie.202000129] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2020] [Indexed: 12/12/2022]
Abstract
Cupin superfamily proteins (TM1459) work as a macromolecular ligand framework with a double-stranded β-barrel structure ligating to a Cu ion through histidine side chains. Variegating the first coordination sphere of TM1459 revealed that H52A and H54A/H58A mutants effectively catalyzed the diastereo- and enantioselective Michael addition reaction of nitroalkanes to an α,β-unsaturated ketone. Moreover, calculated substrate docking signified C106N and F104W single-point mutations, which inverted the diastereoselectivity of H52A and further improved the stereoselectivity of H54A/H58A, respectively.
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Affiliation(s)
- Nobutaka Fujieda
- Department of Applied Life Sciences, Graduate School of Life and Environmental Sciences, Osaka Prefecture University, 1-1 Gakuen-cho, Naka-ku, Sakai-shi, Osaka, 599-8531, Japan
| | - Haruna Ichihashi
- Department of Material and Life Science, Graduate School of Engineering, Osaka University, 2-1 Yamada-oka, Suita, Osaka, 565-0871, Japan
| | - Miho Yuasa
- Department of Applied Life Sciences, Graduate School of Life and Environmental Sciences, Osaka Prefecture University, 1-1 Gakuen-cho, Naka-ku, Sakai-shi, Osaka, 599-8531, Japan
| | - Yosuke Nishikawa
- Institute for Protein Research, Osaka University, 3-2 Yamada-oka, Suita, Osaka, 565-0871, Japan
| | - Genji Kurisu
- Institute for Protein Research, Osaka University, 3-2 Yamada-oka, Suita, Osaka, 565-0871, Japan
| | - Shinobu Itoh
- Department of Material and Life Science, Graduate School of Engineering, Osaka University, 2-1 Yamada-oka, Suita, Osaka, 565-0871, Japan
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13
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Damiano C, Sonzini P, Gallo E. Iron catalysts with N-ligands for carbene transfer of diazo reagents. Chem Soc Rev 2020; 49:4867-4905. [DOI: 10.1039/d0cs00221f] [Citation(s) in RCA: 44] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
This review provides an overview of the catalytic activity of iron complexes of nitrogen ligands in driving carbene transfers towards CC, C–H and X–H bonds. The reactivity of diazo reagents is discussed as well as the proposed reaction mechanisms.
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Affiliation(s)
| | - Paolo Sonzini
- Department of Chemistry
- University of Milan
- 20133 Milan
- Italy
| | - Emma Gallo
- Department of Chemistry
- University of Milan
- 20133 Milan
- Italy
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14
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Dzhardimalieva GI, Rabinskiy LN, Kydralieva KA, Uflyand IE. Recent advances in metallopolymer-based drug delivery systems. RSC Adv 2019; 9:37009-37051. [PMID: 35539076 PMCID: PMC9075603 DOI: 10.1039/c9ra06678k] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2019] [Accepted: 11/06/2019] [Indexed: 12/12/2022] Open
Abstract
Metallopolymers (MPs) or metal-containing polymers have shown great potential as new drug delivery systems (DDSs) due to their unique properties, including universal architectures, composition, properties and surface chemistry. Over the past few decades, the exponential growth of many new classes of MPs that deal with these issues has been demonstrated. This review presents and assesses the recent advances and challenges associated with using MPs as DDSs. Among the most widely used MPs for these purposes, metal complexes based on synthetic and natural polymers, coordination polymers, metal-organic frameworks, and metallodendrimers are distinguished. Particular attention is paid to the stimulus- and multistimuli-responsive metallopolymer-based DDSs. Of considerable interest is the use of MPs for combination therapy and multimodal systems. Finally, the problems and future prospects of using metallopolymer-based DDSs are outlined. The bibliography includes articles published over the past five years.
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Affiliation(s)
- Gulzhian I Dzhardimalieva
- Laboratory of Metallopolymers, The Institute of Problems of Chemical Physics RAS Academician Semenov Avenue 1 Chernogolovka Moscow Region 142432 Russian Federation
- Moscow Aviation Institute (National Research University) Volokolamskoe Shosse, 4 Moscow 125993 Russia
| | - Lev N Rabinskiy
- Moscow Aviation Institute (National Research University) Volokolamskoe Shosse, 4 Moscow 125993 Russia
| | - Kamila A Kydralieva
- Moscow Aviation Institute (National Research University) Volokolamskoe Shosse, 4 Moscow 125993 Russia
| | - Igor E Uflyand
- Department of Chemistry, Southern Federal University B. Sadovaya Str. 105/42 Rostov-on-Don 344006 Russian Federation
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15
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Ghattas W, Dubosclard V, Tachon S, Beaumet M, Guillot R, Réglier M, Simaan AJ, Mahy J. Cu
II
‐Containing 1‐Aminocyclopropane Carboxylic Acid Oxidase Is an Efficient Stereospecific Diels–Alderase. Angew Chem Int Ed Engl 2019; 58:14605-14609. [DOI: 10.1002/anie.201909407] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2019] [Indexed: 12/15/2022]
Affiliation(s)
- Wadih Ghattas
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182 CNRS – Univ Paris Sud Université Paris-Saclay Orsay 91405 Cedex France
| | - Virginie Dubosclard
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182 CNRS – Univ Paris Sud Université Paris-Saclay Orsay 91405 Cedex France
| | - Sybille Tachon
- Institut des Sciences Moléculaires de Marseille (iSm2), UMR 7313 CNRS – Aix Marseille Univ Centrale Marseille Marseille 13013 Cedex France
| | - Morane Beaumet
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182 CNRS – Univ Paris Sud Université Paris-Saclay Orsay 91405 Cedex France
| | - Régis Guillot
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182 CNRS – Univ Paris Sud Université Paris-Saclay Orsay 91405 Cedex France
| | - Marius Réglier
- Institut des Sciences Moléculaires de Marseille (iSm2), UMR 7313 CNRS – Aix Marseille Univ Centrale Marseille Marseille 13013 Cedex France
| | - A. Jalila Simaan
- Institut des Sciences Moléculaires de Marseille (iSm2), UMR 7313 CNRS – Aix Marseille Univ Centrale Marseille Marseille 13013 Cedex France
| | - Jean‐Pierre Mahy
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182 CNRS – Univ Paris Sud Université Paris-Saclay Orsay 91405 Cedex France
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16
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Ghattas W, Dubosclard V, Tachon S, Beaumet M, Guillot R, Réglier M, Simaan AJ, Mahy J. Cu
II
‐Containing 1‐Aminocyclopropane Carboxylic Acid Oxidase Is an Efficient Stereospecific Diels–Alderase. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201909407] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Wadih Ghattas
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182 CNRS – Univ Paris Sud Université Paris-Saclay Orsay 91405 Cedex France
| | - Virginie Dubosclard
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182 CNRS – Univ Paris Sud Université Paris-Saclay Orsay 91405 Cedex France
| | - Sybille Tachon
- Institut des Sciences Moléculaires de Marseille (iSm2), UMR 7313 CNRS – Aix Marseille Univ Centrale Marseille Marseille 13013 Cedex France
| | - Morane Beaumet
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182 CNRS – Univ Paris Sud Université Paris-Saclay Orsay 91405 Cedex France
| | - Régis Guillot
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182 CNRS – Univ Paris Sud Université Paris-Saclay Orsay 91405 Cedex France
| | - Marius Réglier
- Institut des Sciences Moléculaires de Marseille (iSm2), UMR 7313 CNRS – Aix Marseille Univ Centrale Marseille Marseille 13013 Cedex France
| | - A. Jalila Simaan
- Institut des Sciences Moléculaires de Marseille (iSm2), UMR 7313 CNRS – Aix Marseille Univ Centrale Marseille Marseille 13013 Cedex France
| | - Jean‐Pierre Mahy
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), UMR 8182 CNRS – Univ Paris Sud Université Paris-Saclay Orsay 91405 Cedex France
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17
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Szyrwiel Ł, Shimura M, Setner B, Szewczuk Z, Malec K, Malinka W, Brasun J, Pap JS. SOD-Like Activity of Copper(II) Containing Metallopeptides Branched By 2,3-Diaminopropionic Acid: What the N-Termini Elevate, the C-Terminus Ruins. Int J Pept Res Ther 2019. [DOI: 10.1007/s10989-018-9717-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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18
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Yi ZQ, Fang XN, Cao ZY, Wei Y, Li YJ, Yi XG. Preparation, photoluminescence, semiconductor properties, and theoretical calculations for a novel zinc zero-dimensional structure complex. JOURNAL OF CHEMICAL RESEARCH 2019. [DOI: 10.1177/1747519819831886] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The complex [Zn(CH3OH)4(MCA)2] (3-hydroxy-2-methylquinoline-4-carboxylic acid) has been synthesized through hydrothermal reactions and characterized by single-crystal X-ray diffraction. Its solid-state photoluminescence spectrum shows an emission in the blue region, which is assigned to ligand-to-metal charge transfer on the basis of time-dependent density functional theory calculations. Solid-state diffuse reflectance measurements show the existence of a narrow optical band gap of 1.73 eV.
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Affiliation(s)
- Zhi-Qiang Yi
- Institute of Applied Chemistry, School of Chemistry and Chemical Engineering, Jinggangshan University, Ji’an, P.R. China
- Department of Cardiology, Ji’an Municipal Ceter People’s Hospital, Ji’an, Jiangxi, China
| | - Xiao-Niu Fang
- Institute of Applied Chemistry, School of Chemistry and Chemical Engineering, Jinggangshan University, Ji’an, P.R. China
| | - Zi-Yi Cao
- Institute of Applied Chemistry, School of Chemistry and Chemical Engineering, Jinggangshan University, Ji’an, P.R. China
| | - Yao Wei
- Institute of Applied Chemistry, School of Chemistry and Chemical Engineering, Jinggangshan University, Ji’an, P.R. China
| | - Ya-Jing Li
- Institute of Applied Chemistry, School of Chemistry and Chemical Engineering, Jinggangshan University, Ji’an, P.R. China
| | - Xiu-Guang Yi
- Institute of Applied Chemistry, School of Chemistry and Chemical Engineering, Jinggangshan University, Ji’an, P.R. China
- School of Materials Science and Engineering and School of Chemistry, Nanchang University, Nanchang, P.R. China
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19
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Chaibakhsh N, Moradi-Shoeili Z. Enzyme mimetic activities of spinel substituted nanoferrites (MFe 2O 4): A review of synthesis, mechanism and potential applications. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2019; 99:1424-1447. [PMID: 30889678 DOI: 10.1016/j.msec.2019.02.086] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2018] [Revised: 02/19/2019] [Accepted: 02/21/2019] [Indexed: 02/07/2023]
Abstract
Recently, the intrinsic enzyme-like activities of some nanoscale materials known as "nanozymes" have become a growing area of interest. Nanosized spinel substituted ferrites (SFs) with general formula of MFe2O4, where M represents a transition metal, are among a group of magnetic nanomaterials attracting researchers' enormous attention because of their excellent catalytic performance, biomedical applications and capability for environmental remediation. Due to their unique nanoscale physical-chemical properties, they have been used to mimic the catalytic activity of natural enzymes such as peroxidases, oxidases and catalases. In addition, various nanocomposite materials based on SFs have been introduced as novel artificial enzymes. This review mainly highlights the synthetic approaches for newly developed SF-nanozymes and also the structural/experimental factors that are effective on the kinetics and catalytic mechanisms of enzyme-like reactions. SF-nanozymes have been found potentially capable of being applied in various fields such as enzyme-free immunoassays and biosensors for colorimetric detection of biological molecules. Therefore, the application of SF nanoparticles, as efficient enzyme mimetics have been detailed discussed.
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Affiliation(s)
- Naz Chaibakhsh
- Department of Chemistry, Faculty of Sciences, University of Guilan, Rasht 41996-13776, Iran.
| | - Zeinab Moradi-Shoeili
- Department of Chemistry, Faculty of Sciences, University of Guilan, Rasht 41996-13776, Iran.
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20
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Wang Y, Astruc D, Abd-El-Aziz AS. Metallopolymers for advanced sustainable applications. Chem Soc Rev 2019; 48:558-636. [PMID: 30506080 DOI: 10.1039/c7cs00656j] [Citation(s) in RCA: 100] [Impact Index Per Article: 20.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Since the development of metallopolymers, there has been tremendous interest in the applications of this type of materials. The interest in these materials stems from their potential use in industry as catalysts, biomedical agents in healthcare, energy storage and production as well as climate change mitigation. The past two decades have clearly shown exponential growth in the development of many new classes of metallopolymers that address these issues. Today, metallopolymers are considered to be at the forefront for discovering new and sustainable heterogeneous catalysts, therapeutics for drug-resistant diseases, energy storage and photovoltaics, molecular barometers and thermometers, as well as carbon dioxide sequesters. The focus of this review is to highlight the advances in design of metallopolymers with specific sustainable applications.
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Affiliation(s)
- Yanlan Wang
- Liaocheng University, Department of Chemistry and Chemical Engineering, 252059, Liaocheng, China.
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21
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Sauer DF, Qu Y, Mertens MAS, Schiffels J, Polen T, Schwaneberg U, Okuda J. Biohybrid catalysts for sequential one-pot reactions based on an engineered transmembrane protein. Catal Sci Technol 2019. [DOI: 10.1039/c8cy02236d] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
A two-step one pot reaction sequence consisting of artificial metalloprotein olefin metathesis and hydrogenation was performed yielding 1,2-diphenylethane derivatives.
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Affiliation(s)
- D. F. Sauer
- Institute of Inorganic Chemistry
- RWTH Aachen University
- 52074 Aachen
- Germany
- Institute of Biotechnology
| | - Y. Qu
- Institute of Inorganic Chemistry
- RWTH Aachen University
- 52074 Aachen
- Germany
| | - M. A. S. Mertens
- Institute of Biotechnology
- RWTH Aachen University
- 52074 Aachen
- Germany
| | - J. Schiffels
- Institute of Biotechnology
- RWTH Aachen University
- 52074 Aachen
- Germany
| | - T. Polen
- IBG-1: Biotechnology
- Institute of Bio- and Geosciences
- Forschungszentrum Jülich GmbH
- 52425 Jülich
- Germany
| | - U. Schwaneberg
- Institute of Biotechnology
- RWTH Aachen University
- 52074 Aachen
- Germany
- DWI-Leibniz Institute for Interactive Materials
| | - J. Okuda
- Institute of Inorganic Chemistry
- RWTH Aachen University
- 52074 Aachen
- Germany
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22
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Mertens MAS, Sauer DF, Markel U, Schiffels J, Okuda J, Schwaneberg U. Chemoenzymatic cascade for stilbene production from cinnamic acid catalyzed by ferulic acid decarboxylase and an artificial metathease. Catal Sci Technol 2019. [DOI: 10.1039/c9cy01412h] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
We report a chemoenzymatic cascade reaction for stilbene production combining decarboxylation and olefin metathesis with efficient removal of metal contamination.
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Affiliation(s)
| | - Daniel F. Sauer
- Institute of Biotechnology
- RWTH Aachen University
- 52074 Aachen
- Germany
| | - Ulrich Markel
- Institute of Biotechnology
- RWTH Aachen University
- 52074 Aachen
- Germany
| | | | - Jun Okuda
- Institute of Inorganic Chemistry
- RWTH Aachen University
- 52074 Aachen
- Germany
| | - Ulrich Schwaneberg
- Institute of Biotechnology
- RWTH Aachen University
- 52074 Aachen
- Germany
- DWI-Leibniz Institute for Interactive Materials
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23
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Laureanti JA, Buchko GW, Katipamula S, Su Q, Linehan JC, Zadvornyy OA, Peters JW, O’Hagan M. Protein Scaffold Activates Catalytic CO2 Hydrogenation by a Rhodium Bis(diphosphine) Complex. ACS Catal 2018. [DOI: 10.1021/acscatal.8b02615] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Joseph A. Laureanti
- Fundamental and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
| | - Garry W. Buchko
- Fundamental and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
- School of Molecular Biosciences, Washington State University, Pullman, Washington 99164, United States
| | - Sriram Katipamula
- Fundamental and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
| | - Qiwen Su
- Fundamental and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
| | - John C. Linehan
- Fundamental and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
| | - Oleg A. Zadvornyy
- Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164, United States
| | - John W. Peters
- Fundamental and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
- Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164, United States
| | - Molly O’Hagan
- Fundamental and Computational Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
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24
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Tang J, Yao P, Wang L, Bian H, Luo M, Huang F. Schiff base complex conjugates of bovine serum albumin as artificial metalloenzymes for eco-friendly enantioselective sulfoxidation. RSC Adv 2018; 8:40720-40730. [PMID: 35557885 PMCID: PMC9091609 DOI: 10.1039/c8ra07113f] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2018] [Accepted: 11/23/2018] [Indexed: 11/21/2022] Open
Abstract
Artificial metalloenzymes (BSA-ML) have been prepared by non-covalent insertion of transition metal Schiff-base complexes, ML (L = 2-hydroxynaphthalen-1-naphthaldehyde and 3,4-diaminobenzenesulfonic acid; M = Co, Mn, V, Fe, Cr), into bovine serum albumin (BSA) as the host protein and were characterized by UV-visible spectroscopy, ESI-TOF mass spectrometry and molecular docking studies. The catalytic activities of the BSA-ML in the selective oxidation of various prochiral sulfides in aqueous media, using H2O2 as oxidant, have been evaluated. During the optimization process, pH and the concentrations of catalyst and oxidant were found to have a remarkable influence on both yield and enantioselectivity. In certain cases, BSA-ML gave satisfactory results in the oxidation of organic sulfides to sulfoxides (up to 100% conversion, 100% chemoselectivity, 96% ee and 500 h-1 turnover frequency).
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Affiliation(s)
- Jie Tang
- School of Chemistry and Chemical Engineering, Guangxi University for Nationalities, Key Laboratory of Chemistry and Engineering of Forest Products Nanning 530008 P. R. China
- State Key Laboratory for the Chemistry and Molecular Engineering of Medicinal Resources, School of Chemistry and Pharmacy, Guangxi Normal University Guilin 541004 P. R. China
- Guilin Normal College Guilin 541001 P. R. China
| | - Pengfei Yao
- State Key Laboratory for the Chemistry and Molecular Engineering of Medicinal Resources, School of Chemistry and Pharmacy, Guangxi Normal University Guilin 541004 P. R. China
| | - Lina Wang
- State Key Laboratory for the Chemistry and Molecular Engineering of Medicinal Resources, School of Chemistry and Pharmacy, Guangxi Normal University Guilin 541004 P. R. China
| | - Hedong Bian
- School of Chemistry and Chemical Engineering, Guangxi University for Nationalities, Key Laboratory of Chemistry and Engineering of Forest Products Nanning 530008 P. R. China
- State Key Laboratory for the Chemistry and Molecular Engineering of Medicinal Resources, School of Chemistry and Pharmacy, Guangxi Normal University Guilin 541004 P. R. China
| | - Meiyi Luo
- Guilin Normal College Guilin 541001 P. R. China
| | - Fuping Huang
- State Key Laboratory for the Chemistry and Molecular Engineering of Medicinal Resources, School of Chemistry and Pharmacy, Guangxi Normal University Guilin 541004 P. R. China
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25
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Vetr F, Moradi-Shoeili Z, Özkar S. Mesoporous MnCo2O4 with efficient peroxidase mimetic activity for detection of H2O2. INORG CHEM COMMUN 2018. [DOI: 10.1016/j.inoche.2018.10.024] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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26
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Sauer DF, Schiffels J, Hayashi T, Schwaneberg U, Okuda J. Olefin metathesis catalysts embedded in β-barrel proteins: creating artificial metalloproteins for olefin metathesis. Beilstein J Org Chem 2018; 14:2861-2871. [PMID: 30546470 PMCID: PMC6278764 DOI: 10.3762/bjoc.14.265] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2018] [Accepted: 10/26/2018] [Indexed: 12/21/2022] Open
Abstract
This review summarizes the recent progress of Grubbs-Hoveyda (GH) type olefin metathesis catalysts incorporated into the robust fold of β-barrel proteins. Anchoring strategies are discussed and challenges and opportunities in this emerging field are shown from simple small-molecule transformations over ring-opening metathesis polymerizations to in vivo olefin metathesis.
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Affiliation(s)
- Daniel F Sauer
- Institute of Inorganic Chemistry, RWTH Aachen University, Landoltweg 1, 52074 Aachen, Germany
| | - Johannes Schiffels
- Institute of Biotechnology, RWTH Aachen University, Worringerweg 3, 52074 Aachen, Germany
| | - Takashi Hayashi
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita 565-0871, Japan
| | - Ulrich Schwaneberg
- Institute of Biotechnology, RWTH Aachen University, Worringerweg 3, 52074 Aachen, Germany
| | - Jun Okuda
- Institute of Inorganic Chemistry, RWTH Aachen University, Landoltweg 1, 52074 Aachen, Germany
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27
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Raines DJ, Clarke JE, Blagova EV, Dodson EJ, Wilson KS, Duhme-Klair AK. Redox-switchable siderophore anchor enables reversible artificial metalloenzyme assembly. Nat Catal 2018. [DOI: 10.1038/s41929-018-0124-3] [Citation(s) in RCA: 43] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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28
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Kotynia A, Pap JS, Brasun J. The binding abilities of homodetic cyclic His-peptides toward copper ions. Inorganica Chim Acta 2018. [DOI: 10.1016/j.ica.2017.07.028] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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29
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Xu YP, Chen WT, Yi C, Huang JG, Zhang DW, Wang YF. A Novel Manganese Complex with Mixed Ligands: Preparation, Structure, Photoluminescent and Semiconductive Properties. JOURNAL OF CHEMICAL RESEARCH 2018. [DOI: 10.3184/174751918x15212927064594] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
A manganese complex with mixed ligands, [Mn(2,2′-biim)2(4,4′-bipy)] n[Mn(2,2′-biim)3]2 n6 n(ClO4)•8 nH2O (2,2′-biim = 2,2′-biimidazole; 4,4′-bipy = 4,4′-bipyridine), has been obtained by a hydrothermal procedure and its structure determined by single-crystal X-ray crystallography. A two-dimensional (2-D) supramolecular layer is established through hydrogen-bonding interactions. Solid-state photoluminescence measurement reveals that this complex shows a blue light emission. Solid-state diffuse reflectance determination uncovers the presence of a narrow optical band gap of 2.18 eV in this complex.
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Affiliation(s)
- Ya-Ping Xu
- Institute of Applied Chemistry, Jiangxi Province Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Jinggangshan University, 343009, Ji'an, Jiangxi, P. R. China
| | - Wen-Tong Chen
- Institute of Applied Chemistry, Jiangxi Province Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Jinggangshan University, 343009, Ji'an, Jiangxi, P. R. China
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou, Fujian 350002, P. R. China
| | - Cai Yi
- School of Chemical Engineering, Dalian University of Technology, Dalian, Liaoning 116000, China
| | - Jian-Gen Huang
- Institute of Applied Chemistry, Jiangxi Province Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Jinggangshan University, 343009, Ji'an, Jiangxi, P. R. China
| | - Ding-Wa Zhang
- Institute of Applied Chemistry, Jiangxi Province Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Jinggangshan University, 343009, Ji'an, Jiangxi, P. R. China
| | - Yin-Feng Wang
- Institute of Applied Chemistry, Jiangxi Province Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Jinggangshan University, 343009, Ji'an, Jiangxi, P. R. China
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30
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Ségaud N, Drienovská I, Chen J, Browne WR, Roelfes G. Artificial Metalloproteins for Binding and Stabilization of a Semiquinone Radical. Inorg Chem 2018; 56:13293-13299. [PMID: 29027794 PMCID: PMC5676253 DOI: 10.1021/acs.inorgchem.7b02073] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
![]()
The interaction of a number of first-row
transition-metal ions with a 2,2′-bipyridyl alanine (bpyA)
unit incorporated into the lactococcal multidrug resistance regulator
(LmrR) scaffold is reported. The composition of the active site is
shown to influence binding affinities. In the case of Fe(II), we demonstrate
the need of additional ligating residues, in particular those containing
carboxylate groups, in the vicinity of the binding site. Moreover,
stabilization of di-tert-butylsemiquinone radical
(DTB-SQ) in water was achieved by binding to the designed
metalloproteins, which resulted in the radical being shielded from
the aqueous environment. This allowed the first characterization of
the radical semiquinone in water by resonance Raman spectroscopy. A coordination study of first-row transition-metal ions to bipyridine
alanine (bpyA) incorporated into the lactococcal multidrug resistance
regulator (LmrR) scaffold is reported. The designed metalloproteins
were shown to bind and stabilize the di-tert-butylsemiquinone
radical (DTB-SQ) in water, allowing for the first resonance
Raman characterization of this radical species in water.
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Affiliation(s)
- Nathalie Ségaud
- Stratingh Institute for Chemistry, University of Groningen , Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Ivana Drienovská
- Stratingh Institute for Chemistry, University of Groningen , Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Juan Chen
- Stratingh Institute for Chemistry, University of Groningen , Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Wesley R Browne
- Stratingh Institute for Chemistry, University of Groningen , Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Gerard Roelfes
- Stratingh Institute for Chemistry, University of Groningen , Nijenborgh 4, 9747 AG Groningen, The Netherlands
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31
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Yu Y, Hu C, Xia L, Wang J. Artificial Metalloenzyme Design with Unnatural Amino Acids and Non-Native Cofactors. ACS Catal 2018. [DOI: 10.1021/acscatal.7b03754] [Citation(s) in RCA: 65] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Yang Yu
- Tianjin
Institute of Industrial Biotechnology, Chinese Academy of Sciences, 32 West Seventh Avenue, Tianjin Airport Economic Area, Tianjin 300308, China
| | - Cheng Hu
- Laboratory
of RNA Biology, Institute of Biophysics, Chinese Academy of Sciences, 15 Datun Road, Chaoyang District, Beijing 100101, China
| | - Lin Xia
- Center
for Synthetic Biology Engineering Research, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, Guangdong 518055, China
| | - Jiangyun Wang
- Laboratory
of RNA Biology, Institute of Biophysics, Chinese Academy of Sciences, 15 Datun Road, Chaoyang District, Beijing 100101, China
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32
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Altaf AA, Hamayun M, Lal B, Tahir MN, Holder AA, Badshah A, Crans DC. Ferrocene-based anilides: synthesis, structural characterization and inhibition of butyrylcholinesterase. Dalton Trans 2018; 47:11769-11781. [DOI: 10.1039/c8dt01726c] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Twenty-three compounds in two series of ferrocene-based anilides, with the general formula C5H5-Fe-C5H4-C6H4-NH-CO-C6H4-R (where R = H, F, Cl, CH3 and OCH3), have been synthesized and found to inhibit butyrylcholinesterase.
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Affiliation(s)
- Ataf Ali Altaf
- Department of Chemistry
- University of Gujrat
- Gujrat 50700
- Pakistan
| | | | - Bhajan Lal
- Department of Chemistry
- Shah Abdul Latif University
- Khairpur
- Pakistan
| | | | - Alvin A. Holder
- Department of Chemistry and Biochemistry
- Old Dominion University
- Norfolk
- USA
| | - Amin Badshah
- Department of Chemistry
- Quaid-i-Azam University
- Islamabad-45320
- Pakistan
| | - Debbie C. Crans
- Department of Chemistry
- Colorado State University
- Fort Collins
- USA
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33
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Design of artificial metalloproteins/metalloenzymes by tuning noncovalent interactions. J Biol Inorg Chem 2017; 23:7-25. [DOI: 10.1007/s00775-017-1506-8] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2017] [Accepted: 09/20/2017] [Indexed: 12/12/2022]
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34
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35
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Li J, Tang X, Awakawa T, Moore BS. Enzymatic C−H Oxidation-Amidation Cascade in the Production of Natural and Unnatural Thiotetronate Antibiotics with Potentiated Bioactivity. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201705239] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Jie Li
- Center of Marine Biotechnology and Biomedicine; Scripps Institution of Oceanography; University of California at San Diego; 9500 Gilman Drive La Jolla CA 92093-0204 USA
| | - Xiaoyu Tang
- Center of Marine Biotechnology and Biomedicine; Scripps Institution of Oceanography; University of California at San Diego; 9500 Gilman Drive La Jolla CA 92093-0204 USA
| | - Takayoshi Awakawa
- Center of Marine Biotechnology and Biomedicine; Scripps Institution of Oceanography; University of California at San Diego; 9500 Gilman Drive La Jolla CA 92093-0204 USA
- Graduate School of Pharmaceutical Sciences; The University of Tokyo; 7-3-1 Hongo, Bunkyo-ku Tokyo 113-0033 Japan
| | - Bradley S. Moore
- Center of Marine Biotechnology and Biomedicine; Scripps Institution of Oceanography; University of California at San Diego; 9500 Gilman Drive La Jolla CA 92093-0204 USA
- Skaggs School of Pharmacy and Pharmaceutical Sciences; University of California at San Diego; 9500 Gilman Drive La Jolla CA 92093 USA
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36
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Avraham ES, Fleker O, Benisvy L, Oakes L, Pint CL, Nessim GD. Inducing porosity and growing carbon nanofibers in ferroin perchlorate: An example of morphological transitions in coordination complexes. J SOLID STATE CHEM 2017. [DOI: 10.1016/j.jssc.2017.05.021] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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37
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Li J, Tang X, Awakawa T, Moore BS. Enzymatic C-H Oxidation-Amidation Cascade in the Production of Natural and Unnatural Thiotetronate Antibiotics with Potentiated Bioactivity. Angew Chem Int Ed Engl 2017; 56:12234-12239. [PMID: 28833969 DOI: 10.1002/anie.201705239] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2017] [Revised: 07/28/2017] [Indexed: 11/10/2022]
Abstract
The selective activation of unreactive hydrocarbons by biosynthetic enzymes has inspired new synthetic methods in C-H bond activation. Herein, we report the unprecedented two-step biosynthetic conversion of thiotetromycin to thiotetroamide C involving the tandem oxidation and amidation of an unreactive ethyl group. We detail the genetic and biochemical basis for the terminal amidation in thiotetroamide C biosynthesis, which involves a uniquely adapted cytochrome P450-amidotransferase enzyme pair and highlights the first oxidation-amidation enzymatic cascade reaction leading to the selective formation of a primary amide group from a chemically inert alkyl group. Motivated by the ten-fold increase in antibiotic potency of thiotetroamide C ascribed to the acetamide group and the unusual enzymology involved, we enzymatically interrogated diverse thiolactomycin analogues and prepared an unnatural thiotetroamide C analogue with potentiated bioactivity compared to the parent molecule.
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Affiliation(s)
- Jie Li
- Center of Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California at San Diego, 9500 Gilman Drive, La Jolla, CA, 92093-0204, USA
| | - Xiaoyu Tang
- Center of Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California at San Diego, 9500 Gilman Drive, La Jolla, CA, 92093-0204, USA
| | - Takayoshi Awakawa
- Center of Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California at San Diego, 9500 Gilman Drive, La Jolla, CA, 92093-0204, USA.,Graduate School of Pharmaceutical Sciences, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
| | - Bradley S Moore
- Center of Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California at San Diego, 9500 Gilman Drive, La Jolla, CA, 92093-0204, USA.,Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California at San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA
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38
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Jing X, Yang Y, He C, Chang Z, Reek JNH, Duan C. Control of Redox Events by Dye Encapsulation Applied to Light-Driven Splitting of Hydrogen Sulfide. Angew Chem Int Ed Engl 2017; 56:11759-11763. [DOI: 10.1002/anie.201704327] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2017] [Indexed: 01/13/2023]
Affiliation(s)
- Xu Jing
- State Key Laboratory of Fine Chemicals; Dalian University of Technology; Dalian 116024 China
- Collaborative Innovation Center of Chemical Science and Engineering (Tianjin); Tianjin 300071 China
| | - Yang Yang
- State Key Laboratory of Fine Chemicals; Dalian University of Technology; Dalian 116024 China
| | - Cheng He
- State Key Laboratory of Fine Chemicals; Dalian University of Technology; Dalian 116024 China
| | - Zhiduo Chang
- State Key Laboratory of Fine Chemicals; Dalian University of Technology; Dalian 116024 China
| | - Joost N. H. Reek
- Van't Hoff Institute for Molecular Science; University of Amsterdam; Science Park 904 1098 XH Amsterdam The Netherlands
| | - Chunying Duan
- State Key Laboratory of Fine Chemicals; Dalian University of Technology; Dalian 116024 China
- Collaborative Innovation Center of Chemical Science and Engineering (Tianjin); Tianjin 300071 China
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39
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Jing X, Yang Y, He C, Chang Z, Reek JNH, Duan C. Control of Redox Events by Dye Encapsulation Applied to Light-Driven Splitting of Hydrogen Sulfide. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201704327] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Affiliation(s)
- Xu Jing
- State Key Laboratory of Fine Chemicals; Dalian University of Technology; Dalian 116024 China
- Collaborative Innovation Center of Chemical Science and Engineering (Tianjin); Tianjin 300071 China
| | - Yang Yang
- State Key Laboratory of Fine Chemicals; Dalian University of Technology; Dalian 116024 China
| | - Cheng He
- State Key Laboratory of Fine Chemicals; Dalian University of Technology; Dalian 116024 China
| | - Zhiduo Chang
- State Key Laboratory of Fine Chemicals; Dalian University of Technology; Dalian 116024 China
| | - Joost N. H. Reek
- Van't Hoff Institute for Molecular Science; University of Amsterdam; Science Park 904 1098 XH Amsterdam The Netherlands
| | - Chunying Duan
- State Key Laboratory of Fine Chemicals; Dalian University of Technology; Dalian 116024 China
- Collaborative Innovation Center of Chemical Science and Engineering (Tianjin); Tianjin 300071 China
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40
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Kinzel J, Sauer DF, Bocola M, Arlt M, Mirzaei Garakani T, Thiel A, Beckerle K, Polen T, Okuda J, Schwaneberg U. 2-Methyl-2,4-pentanediol (MPD) boosts as detergent-substitute the performance of ß-barrel hybrid catalyst for phenylacetylene polymerization. Beilstein J Org Chem 2017; 13:1498-1506. [PMID: 28845193 PMCID: PMC5550818 DOI: 10.3762/bjoc.13.148] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2017] [Accepted: 07/13/2017] [Indexed: 02/02/2023] Open
Abstract
Covering hydrophobic regions with stabilization agents to solubilize purified transmembrane proteins is crucial for their application in aqueous media. The small molecule 2-methyl-2,4-pentanediol (MPD) was used to stabilize the transmembrane protein Ferric hydroxamate uptake protein component A (FhuA) utilized as host for the construction of a rhodium-based biohybrid catalyst. Unlike commonly used detergents such as sodium dodecyl sulfate or polyethylene polyethyleneglycol, MPD does not form micelles in solution. Molecular dynamics simulations revealed the effect and position of stabilizing MPD molecules. The advantage of the amphiphilic MPD over micelle-forming detergents is demonstrated in the polymerization of phenylacetylene, showing a ten-fold increase in yield and increased molecular weights.
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Affiliation(s)
- Julia Kinzel
- Institute of Biotechnology, RWTH Aachen University, Worringer Weg 3, 52074 Aachen, Germany
| | - Daniel F Sauer
- Institut für Anorganische Chemie, RWTH Aachen University, Landoltweg 1, 52074 Aachen, Germany
| | - Marco Bocola
- Institute of Biotechnology, RWTH Aachen University, Worringer Weg 3, 52074 Aachen, Germany
| | - Marcus Arlt
- Institute of Biotechnology, RWTH Aachen University, Worringer Weg 3, 52074 Aachen, Germany
| | - Tayebeh Mirzaei Garakani
- Institute of Biotechnology, RWTH Aachen University, Worringer Weg 3, 52074 Aachen, Germany.,DWI - Leibniz Institute for Interactive Materials e.V., Forckenbeckstr. 50, 52056, Aachen, Germany
| | - Andreas Thiel
- Institut für Anorganische Chemie, RWTH Aachen University, Landoltweg 1, 52074 Aachen, Germany
| | - Klaus Beckerle
- Institut für Anorganische Chemie, RWTH Aachen University, Landoltweg 1, 52074 Aachen, Germany
| | - Tino Polen
- Institute of Bio- und Geosciences, IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, 52425 Jülich, Germany
| | - Jun Okuda
- Institut für Anorganische Chemie, RWTH Aachen University, Landoltweg 1, 52074 Aachen, Germany
| | - Ulrich Schwaneberg
- Institute of Biotechnology, RWTH Aachen University, Worringer Weg 3, 52074 Aachen, Germany.,DWI - Leibniz Institute for Interactive Materials e.V., Forckenbeckstr. 50, 52056, Aachen, Germany
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41
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Schwizer F, Okamoto Y, Heinisch T, Gu Y, Pellizzoni MM, Lebrun V, Reuter R, Köhler V, Lewis JC, Ward TR. Artificial Metalloenzymes: Reaction Scope and Optimization Strategies. Chem Rev 2017; 118:142-231. [PMID: 28714313 DOI: 10.1021/acs.chemrev.7b00014] [Citation(s) in RCA: 490] [Impact Index Per Article: 70.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The incorporation of a synthetic, catalytically competent metallocofactor into a protein scaffold to generate an artificial metalloenzyme (ArM) has been explored since the late 1970's. Progress in the ensuing years was limited by the tools available for both organometallic synthesis and protein engineering. Advances in both of these areas, combined with increased appreciation of the potential benefits of combining attractive features of both homogeneous catalysis and enzymatic catalysis, led to a resurgence of interest in ArMs starting in the early 2000's. Perhaps the most intriguing of potential ArM properties is their ability to endow homogeneous catalysts with a genetic memory. Indeed, incorporating a homogeneous catalyst into a genetically encoded scaffold offers the opportunity to improve ArM performance by directed evolution. This capability could, in turn, lead to improvements in ArM efficiency similar to those obtained for natural enzymes, providing systems suitable for practical applications and greater insight into the role of second coordination sphere interactions in organometallic catalysis. Since its renaissance in the early 2000's, different aspects of artificial metalloenzymes have been extensively reviewed and highlighted. Our intent is to provide a comprehensive overview of all work in the field up to December 2016, organized according to reaction class. Because of the wide range of non-natural reactions catalyzed by ArMs, this was done using a functional-group transformation classification. The review begins with a summary of the proteins and the anchoring strategies used to date for the creation of ArMs, followed by a historical perspective. Then follows a summary of the reactions catalyzed by ArMs and a concluding critical outlook. This analysis allows for comparison of similar reactions catalyzed by ArMs constructed using different metallocofactor anchoring strategies, cofactors, protein scaffolds, and mutagenesis strategies. These data will be used to construct a searchable Web site on ArMs that will be updated regularly by the authors.
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Affiliation(s)
- Fabian Schwizer
- Department of Chemistry, Spitalstrasse 51, University of Basel , CH-4056 Basel, Switzerland
| | - Yasunori Okamoto
- Department of Chemistry, Spitalstrasse 51, University of Basel , CH-4056 Basel, Switzerland
| | - Tillmann Heinisch
- Department of Chemistry, Spitalstrasse 51, University of Basel , CH-4056 Basel, Switzerland
| | - Yifan Gu
- Searle Chemistry Laboratory, University of Chicago , 5735 S. Ellis Ave., Chicago, Illinois 60637, United States
| | - Michela M Pellizzoni
- Department of Chemistry, Spitalstrasse 51, University of Basel , CH-4056 Basel, Switzerland
| | - Vincent Lebrun
- Department of Chemistry, Spitalstrasse 51, University of Basel , CH-4056 Basel, Switzerland
| | - Raphael Reuter
- Department of Chemistry, Spitalstrasse 51, University of Basel , CH-4056 Basel, Switzerland
| | - Valentin Köhler
- Department of Chemistry, Spitalstrasse 51, University of Basel , CH-4056 Basel, Switzerland
| | - Jared C Lewis
- Searle Chemistry Laboratory, University of Chicago , 5735 S. Ellis Ave., Chicago, Illinois 60637, United States
| | - Thomas R Ward
- Department of Chemistry, Spitalstrasse 51, University of Basel , CH-4056 Basel, Switzerland
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42
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Hu S, He B, Du KJ, Wang XJ, Gao SQ, Lin YW. Peroxidase Activity of a c-Type Cytochrome b5 in the Non-Native State is Comparable to that of Native Peroxidases. ChemistryOpen 2017. [PMID: 28638761 PMCID: PMC5474653 DOI: 10.1002/open.201700055] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
Abstract
The design of artificial metalloenzymes has achieved tremendous progress, although few designs can achieve catalytic performances comparable to that of native enzymes. Moreover, the structure and function of artificial metalloenzymes in non‐native states has rarely been explored. Herein, we found that a c‐type cytochrome b5 (Cyt b5), N57C/S71C Cyt b5, with heme covalently attached to the protein matrix through two Cys–heme linkages, adopts a non‐native state with an open heme site after guanidine hydrochloride (Gdn⋅HCl)‐induced unfolding, which facilitates H2O2 activation and substrate binding. Stopped‐flow kinetic studies further revealed that c‐type Cyt b5 in the non‐native state exhibited impressive peroxidase activity comparable to that of native peroxidases, such as the most efficient horseradish peroxidase. This study presents an alternative approach to the design of functional artificial metalloenzymes by exploring enzymatic functions in non‐native states.
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Affiliation(s)
- Shan Hu
- School of Chemistry and Chemical Engineering University of South China Hengyang 421001 P.R. China
| | - Bo He
- School of Chemistry and Chemical Engineering University of South China Hengyang 421001 P.R. China
| | - Ke-Jie Du
- School of Chemistry and Chemical Engineering University of South China Hengyang 421001 P.R. China
| | - Xiao-Juan Wang
- School of Chemistry and Chemical Engineering University of South China Hengyang 421001 P.R. China
| | - Shu-Qin Gao
- Laboratory of Protein Structure and Function University of South China Hengyang 421001 P.R. China
| | - Ying-Wu Lin
- School of Chemistry and Chemical Engineering University of South China Hengyang 421001 P.R. China.,Laboratory of Protein Structure and Function University of South China Hengyang 421001 P.R. China
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43
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Bolzon LB, dos Santos JS, Silva DB, Crevelin EJ, Moraes LA, Lopes NP, Assis MD. Apigenin-7-O-glucoside oxidation catalyzed by P450-bioinspired systems. J Inorg Biochem 2017; 170:117-124. [PMID: 28236787 DOI: 10.1016/j.jinorgbio.2017.02.016] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2016] [Revised: 02/14/2017] [Accepted: 02/17/2017] [Indexed: 12/30/2022]
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44
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Fujieda N, Nakano T, Taniguchi Y, Ichihashi H, Sugimoto H, Morimoto Y, Nishikawa Y, Kurisu G, Itoh S. A Well-Defined Osmium–Cupin Complex: Hyperstable Artificial Osmium Peroxygenase. J Am Chem Soc 2017; 139:5149-5155. [DOI: 10.1021/jacs.7b00675] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Nobutaka Fujieda
- Department
of Material and Life Science, Graduate School of Engineering, Osaka University, 2-1 Yamada-oka, Suita, Osaka 565-0871, Japan
| | - Takumi Nakano
- Department
of Material and Life Science, Graduate School of Engineering, Osaka University, 2-1 Yamada-oka, Suita, Osaka 565-0871, Japan
| | - Yuki Taniguchi
- Department
of Material and Life Science, Graduate School of Engineering, Osaka University, 2-1 Yamada-oka, Suita, Osaka 565-0871, Japan
| | - Haruna Ichihashi
- Department
of Material and Life Science, Graduate School of Engineering, Osaka University, 2-1 Yamada-oka, Suita, Osaka 565-0871, Japan
| | - Hideki Sugimoto
- Department
of Material and Life Science, Graduate School of Engineering, Osaka University, 2-1 Yamada-oka, Suita, Osaka 565-0871, Japan
| | - Yuma Morimoto
- Department
of Material and Life Science, Graduate School of Engineering, Osaka University, 2-1 Yamada-oka, Suita, Osaka 565-0871, Japan
| | - Yosuke Nishikawa
- Institute
for Protein Research, Osaka University, 3-2 Yamada-oka, Suita, Osaka 565-0871, Japan
| | - Genji Kurisu
- Institute
for Protein Research, Osaka University, 3-2 Yamada-oka, Suita, Osaka 565-0871, Japan
| | - Shinobu Itoh
- Department
of Material and Life Science, Graduate School of Engineering, Osaka University, 2-1 Yamada-oka, Suita, Osaka 565-0871, Japan
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45
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46
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Shabbir M, Akhter Z, Ahmad I, Ahmed S, McKee V, Ismail H, Mirza B. Copper (II) complexes bearing ether based ON donor bidentate Schiff bases: Synthesis, characterization, biological and electrochemical investigations. Polyhedron 2017. [DOI: 10.1016/j.poly.2016.12.039] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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47
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Li LL, Yuan H, Liao F, He B, Gao SQ, Wen GB, Tan X, Lin YW. Rational design of artificial dye-decolorizing peroxidases using myoglobin by engineering Tyr/Trp in the heme center. Dalton Trans 2017; 46:11230-11238. [DOI: 10.1039/c7dt02302b] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Artificial dye-decolorizing peroxidases (DyPs) have been rationally designed using myoglobin (Mb) as a protein scaffold by engineering Tyr/Trp in the heme center, such as F43Y/F138 W Mb, which exhibited catalytic performance comparable to some native DyPs.
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Affiliation(s)
- Le-Le Li
- School of Chemistry and Chemical Engineering
- University of South China
- Hengyang 421001
- China
| | - Hong Yuan
- Department of Chemistry & Institute of Biomedical Science
- Fudan University
- Shanghai 200433
- China
| | - Fei Liao
- School of Chemistry and Chemical Engineering
- University of South China
- Hengyang 421001
- China
| | - Bo He
- School of Chemistry and Chemical Engineering
- University of South China
- Hengyang 421001
- China
| | - Shu-Qin Gao
- Laboratory of Protein Structure and Function
- University of South China
- Hengyang 421001
- China
| | - Ge-Bo Wen
- Laboratory of Protein Structure and Function
- University of South China
- Hengyang 421001
- China
| | - Xiangshi Tan
- Department of Chemistry & Institute of Biomedical Science
- Fudan University
- Shanghai 200433
- China
| | - Ying-Wu Lin
- School of Chemistry and Chemical Engineering
- University of South China
- Hengyang 421001
- China
- Laboratory of Protein Structure and Function
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48
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Nastri F, Chino M, Maglio O, Bhagi-Damodaran A, Lu Y, Lombardi A. Design and engineering of artificial oxygen-activating metalloenzymes. Chem Soc Rev 2016; 45:5020-54. [PMID: 27341693 PMCID: PMC5021598 DOI: 10.1039/c5cs00923e] [Citation(s) in RCA: 133] [Impact Index Per Article: 16.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Many efforts are being made in the design and engineering of metalloenzymes with catalytic properties fulfilling the needs of practical applications. Progress in this field has recently been accelerated by advances in computational, molecular and structural biology. This review article focuses on the recent examples of oxygen-activating metalloenzymes, developed through the strategies of de novo design, miniaturization processes and protein redesign. Considerable progress in these diverse design approaches has produced many metal-containing biocatalysts able to adopt the functions of native enzymes or even novel functions beyond those found in Nature.
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Affiliation(s)
- Flavia Nastri
- Department of Chemical Sciences, University of Naples “Federico II”, Via Cintia, 80126 Naples, Italy
| | - Marco Chino
- Department of Chemical Sciences, University of Naples “Federico II”, Via Cintia, 80126 Naples, Italy
| | - Ornella Maglio
- Department of Chemical Sciences, University of Naples “Federico II”, Via Cintia, 80126 Naples, Italy
- IBB, CNR, Via Mezzocannone 16, 80134 Naples, Italy
| | - Ambika Bhagi-Damodaran
- Department of Chemistry, University of Illinois at Urbana-Champaign, A322 CLSL, 600 South Mathews Avenue, Urbana, IL 61801
| | - Yi Lu
- Department of Chemistry, University of Illinois at Urbana-Champaign, A322 CLSL, 600 South Mathews Avenue, Urbana, IL 61801
| | - Angela Lombardi
- Department of Chemical Sciences, University of Naples “Federico II”, Via Cintia, 80126 Naples, Italy
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49
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Machan CW, Yin J, Chabolla SA, Gilson MK, Kubiak CP. Improving the Efficiency and Activity of Electrocatalysts for the Reduction of CO2 through Supramolecular Assembly with Amino Acid-Modified Ligands. J Am Chem Soc 2016; 138:8184-93. [DOI: 10.1021/jacs.6b03774] [Citation(s) in RCA: 50] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Charles W. Machan
- Department
of Chemistry and Biochemistry, University of California − San Diego, 9500 Gilman Drive 0358, La Jolla, California 92023, United States
| | - Jian Yin
- Skaggs
School of Pharmacy and Pharmaceutical Sciences, University of California − San Diego, 9500 Gilman Drive, La Jolla, California 92093-0736, United States
| | - Steven A. Chabolla
- Department
of Chemistry and Biochemistry, University of California − San Diego, 9500 Gilman Drive 0358, La Jolla, California 92023, United States
| | - Michael K. Gilson
- Skaggs
School of Pharmacy and Pharmaceutical Sciences, University of California − San Diego, 9500 Gilman Drive, La Jolla, California 92093-0736, United States
| | - Clifford P. Kubiak
- Department
of Chemistry and Biochemistry, University of California − San Diego, 9500 Gilman Drive 0358, La Jolla, California 92023, United States
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50
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Hartwig JF, Larsen MA. Undirected, Homogeneous C-H Bond Functionalization: Challenges and Opportunities. ACS CENTRAL SCIENCE 2016; 2:281-92. [PMID: 27294201 PMCID: PMC4898263 DOI: 10.1021/acscentsci.6b00032] [Citation(s) in RCA: 542] [Impact Index Per Article: 67.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2016] [Indexed: 05/19/2023]
Abstract
The functionalization of C-H bonds has created new approaches to preparing organic molecules by enabling new strategic "disconnections" during the planning of a synthetic route. Such functionalizations also have created the ability to derivatize complex molecules by modifying one or more of the many C-H bonds. For these reasons, researchers are developing new types of functionalization reactions of C-H bonds and new applications of these processes. These C-H bond functionalization reactions can be divided into two general classes: those directed by coordination to an existing functional group prior to the cleavage of the C-H bond (directed) and those occurring without coordination prior to cleavage of the C-H bond (undirected). The undirected functionalizations of C-H bonds are much less common and more challenging to develop than the directed reactions. This outlook will focus on undirected C-H bond functionalization, as well as related reactions that occur by a noncovalent association of the catalyst prior to C-H bond cleavage. The inherent challenges of conducting undirected functionalizations of C-H bonds and the methods for undirected functionalization that are being developed will be presented, along with the factors that govern selectivity in these reactions. Finally, this outlook discusses future directions for research on undirected C-H functionalization, with an emphasis on the limitations that must be overcome if this type of methodology is to become widely used in academia and in industry.
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Affiliation(s)
- John F. Hartwig
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Division
of Chemical Sciences, Lawrence Berkeley
Laboratory, Berkeley, California 94720, United States
| | - Matthew A. Larsen
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Division
of Chemical Sciences, Lawrence Berkeley
Laboratory, Berkeley, California 94720, United States
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