Prospects of genetic engineering utilizing potential genes for regulating arsenic accumulation in plants

An evaluation of arsenic contamination status and its potential health risk assessment in villages of Nadia and North 24 Parganas, West Bengal, India

The present study was conducted to evaluate the arsenic (As) contamination and possible associated health hazards to exposed population in four villages of two districts (Nadia and North 24 Parganas) of West Bengal, India. The study included two villages each from Nadia (Jaguli and Kugacchi) and North 24 Parganas (Chamta and Byaspur) districts. Groundwater, surface water, soil, rice grains and rice-based food samples were collected from these villages. The results revealed the presence of As in high concentrations in groundwater (35.00 to 186.00 µg L-1), surface water (30.00 to 61.00 µg L-1), soil (46.17 to 66.00 mg kg-1), rice grains (0.017 to 1.27 µg g-1) and rice-based food products (0.012 to 0.40 µg g-1). The maximum As levels were recorded in all types of samples collected from Kugacchi village. The rice grain samples included high-yielding and local varieties, and the level of As in high-yielding varieties was found to be higher (0.72 to 1.27 µg g-1) than in local varieties (0.25 to 1.06 µg g-1). The data of As concentrations was used for understanding the hazard quotient (HQ) and incremental lifetime cancer risk (ILCR) to the As-exposed population, and significant non-carcinogenic and carcinogenic risks were revealed considering consumption of rice grains at 400 g per day. The study demonstrates the severity of As contamination in the surveyed villages, which may pose a hindrance to attainment of sustainable development goals (SDGs) by 2030 and proposes the implementation of requisite safety measures.

The Molecular Mechanism of the Response of Rice to Arsenic Stress and Effective Strategies to Reduce the Accumulation of Arsenic in Grain

Rice (Oryza sativa L.) is the staple food for more than 50% of the world's population. Owing to its growth characteristics, rice has more than 10-fold the ability to enrich the carcinogen arsenic (As) than other crops, which seriously affects world food security. The consumption of rice is one of the primary ways for humans to intake As, and it endangers human health. Effective measures to control As pollution need to be studied and promoted. Currently, there have been many studies on reducing the accumulation of As in rice. They are generally divided into agronomic practices and biotechnological approaches, but simultaneously, the problem of using the same measures to obtain the opposite results may be due to the different species of As or soil environments. There is a lack of systematic discussion on measures to reduce As in rice based on its mechanism of action. Therefore, an in-depth understanding of the molecular mechanism of the accumulation of As in rice could result in accurate measures to reduce the content of As based on local conditions. Different species of As have different toxicity and metabolic pathways. This review comprehensively summarizes and reviews the molecular mechanisms of toxicity, absorption, transport and redistribution of different species of As in rice in recent years, and the agronomic measures to effectively reduce the accumulation of As in rice and the genetic resources that can be used to breed for rice that only accumulates low levels of As. The goal of this review is to provide theoretical support for the prevention and control of As pollution in rice, facilitate the creation of new types of germplasm aiming to develop without arsenic accumulation or within an acceptable limit to prevent the health consequences associated with heavy metal As as described here.

Silver nanoparticle ecotoxicity and phytoremediation: a critical review of current research and future prospects

Silver nanoparticles (AgNPs) are widely used in various industries, including textiles, electronics, and biomedical fields, due to their unique optical, electronic, and antimicrobial properties. However, the extensive use of AgNPs has raised concerns about their potential ecotoxicity and adverse effects on the environment. AgNPs can enter the environment through different pathways, such as wastewater, surface runoff, and soil application and can interact with living organisms through adsorption, ingestion, and accumulation, causing toxicity and harm. The small size, high surface area-to-volume ratio, and ability to generate reactive oxygen species (ROS) make AgNPs particularly toxic. Various bioremediation strategies, such as phytoremediation, have been proposed to mitigate the toxic effects of AgNPs and minimize their impact on the environment. Further research is needed to improve these strategies and ensure their safety and efficacy in different environmental settings.

Identification of arsenic oxidizing genes fragment in Microbacterium sp. strain 1S1 and its cloning in E. coli (DH5a)

Microbacterium sp. strain 1S1, an arsenic-resistant bacterial strain, was isolated with 75 mM MIC against arsenite. Brownish precipitation with silver nitrate appeared, which confirmed its oxidizing ability against arsenite. The bacterial genomic DNA underwent Illumina and Nanopore sequencing, revealing a distinctive cluster of genes spanning 9.6 kb associated with arsenite oxidation. These genes were identified within an isolated bacterial strain. Notably, the smaller subunit (aioB) of the arsenite oxidizing gene at the chromosomal DNA locus (Prokka_01508) was pinpointed. This gene, aioB, is pivotal in arsenite oxidation, a process crucial for energy metabolism. Upon thorough sequencing analysis, only a singular megaplasmid was detected within the isolated bacterial strain. Strikingly, this megaplasmid did not harbor any genes responsible for arsenic resistance or detoxification. This intriguingly indicates that the bacterial strain relies on the arsenic oxidizing genes present for its efficient arsenic oxidation capability. This is especially true for Microbacterium sp. strain 1S1. Subsequently, a segment of genes linked to arsenic resistance was successfully cloned into E. coli (DH5a). The fragment of arsenic-resistant genes was cloned in E. coli (DH5a), further confirmed by the AgNO3 method. This genetically engineered E. coli (DH5a) can decontaminate arsenic-contaminated sites.

Hydrochar-nanoparticle integration for arsenic removal from wastewater: Challenges, possible solutions, and future horizon

Arsenic (As) contamination poses a significant threat to human health, ecosystems, and agriculture, with levels ranging from 12 to 75% attributed to mine waste and stream sediments. This naturally element is abundant in Earth's crust and gets released into the environment through mining and rock processing, causing ≈363 million people to depend on As-contaminated groundwater. To combat this issue, introducing a sustainable hydrochar system has achieved a remarkable removal efficiency of over 92% for arsenic through adsorption. This comprehensive review presents an overview of As contamination in the environment, with a specific focus on its impact on drinking water and wastewater. It delves into the far-reaching effects of As on human health, ecosystems, aquatic systems, and agriculture, while also exploring the effectiveness of existing As treatment systems. Additionally, the study examines the potential of hydrochar as an efficient adsorbent for As removal from water/wastewater, along with other relevant adsorbents and biomass-based preparations of hydrochar. Notably, the fusion of hydrochar with nanoparticle-centric approaches presents a highly promising and environmentally friendly solution for achieving the removal of As from wastewater, exceeding >99% efficiency. This innovative approach holds immense potential for advancing the realms of green chemistry and environmental restoration. Various challenges associated with As contamination and treatment are highlighted, and proposed solutions are discussed. The review emphasizes the urgent need to advance treatment technologies, improve monitoring methods, and enhance regulatory frameworks. Looking outlook, the article underscores the importance of fostering research efforts, raising public awareness, and fostering interdisciplinary collaboration to address this critical environmental issue. Such efforts are vital for UN Sustainable Development Goals, especially clean water and sanitation (Goal 6) and climate action (Goal 13), crucial for global sustainability.

Brevibacterium sp. strain CS2: A potential candidate for arsenic bioremediation from industrial wastewater

A multiple metal-resistant Brevibacterium sp. strain CS2, isolated from an industrial wastewater, resisted arsenate and arsenate upto 280 and 40 mM. The order of resistance against multiple metals was Arsenate > Arsenite > Selenium = Cobalt > Lead = Nickel > Cadmium = Chromium = Mercury. The bacterium was characterized as per morphological and biochemical characteristics at optimum conditions (37 ℃ and 7 pH). The appearance of brownish color precipitation was due to the interaction of silver nitrate confirming its oxidizing ability against arsenic. The strain showed arsenic processing ability at different temperatures, pH, and initial arsenic concentration which was 37% after 72 h and 48% after 96 h of incubation at optimum conditions with arsenite 250 mM/L (initial arsenic concentration). The maximum arsenic removal ability of strain CS2 was determined for 8 days, which was 32 and 46% in wastewater and distilled water, respectively. The heat-inactivated cells of the isolated strain showed a bioremediation efficiency (E) of 96% after 10 h. Genes cluster (9.6 kb) related to arsenite oxidation was found in Brevibacterium sp. strain CS2 after the genome analysis of isolated bacteria through illumine and nanopore sequencing technology. The arsenite oxidizing gene smaller subunit (aioB) on chromosomal DNA locus (Prokka_01508) was identified which plays a role in arsenite oxidation for energy metabolism. The presence of arsenic oxidizing genes and an efficient arsenic oxidizing potential of Brevibacterium sp. strain CS2 make it a potential candidate for green chemistry to eradicate arsenic from arsenic-contaminated wastewater.

Gene regulation and ionome homeostasis in rice plants in response to arsenite stress: potential connection between transcriptomics and ionomics

Ionomics and transcriptomics were applied to demonstrate response of rice to arsenite [As(III)] stress in the current study. Rice plants were cultured in nutrient solutions treated with 0, 100 and 500 μg/L As(III) coded as CK, As1 and As5, respectively. The rice ionomes exhibited discriminatory response to environmental disturbances. Solid evidence of the effects of As(III) stress on binding, transport or metabolism of P, K, Ca, Zn and Cu was obtained in this work. Differentially expressed genes (DEGs) in the shoots were identified in three datasets: As1 vs CK, As5 vs CK and As5 vs As1. DEGs identified simultaneously in two or three datasets were selected for subsequent interaction and enrichment analyses. Upregulation of genes involved in protein kinase activity, phosphorus metabolic process and phosphorylation were detected in the rice treated with As(III), resulting in the maintenance of P homeostasis in the shoots. Zn and Ca binding genes were up-regulated since excess As inhibited the translocation of Zn and Ca from roots to shoots. Increased expression of responsive genes including HMA, WRKY, NAC and PUB genes conferred As tolerance in the rice plants to cope with external As(III) stress. The results suggested that As(III) stress could disturb the uptake and translocation of macro and essential elements by rice. Plants could regulate the expression of corresponding genes to maintain mineral nutrient homeostasis for essential metabolic processes.

Anaerobic methane oxidation coupled to arsenate reduction in paddy soils: Insights from laboratory and field studies

Anaerobic methane oxidation (AOM) coupled to nitrate, sulfate and iron has been most extensively studied. Recently, AOM coupled with arsenate reduction (AOM-AsR) was demonstrated in laboratory microcosm incubation, however whether AOM-AsR is active in the field conditions remains elusive. Here, we used 13C-labeled methane (13CH4) to investigate the AOM-AsR process in both anaerobic microcosms and field conditions with identical soils. Our results revealed the occurrence of AOM-AsR in the field, but AOM-AsR in the field was not as active as that which occurred in the laboratory (AOM-AsR contributed approximately 33.87% and 80.76% of total As release in the field and laboratory studies, respectively). This occurred because the laboratory setting provided a more suitable condition for the AOM-AsR process. Moreover, the results suggested that the relative abundance of mcrA from the ANME-2d was the most abundant. Our results clearly demonstrate that the AOM-AsR is active in both the laboratory and field conditions. Moreover, the results highlight the potential risk the AOM-AsR for pose for As contamination in rice paddies.

Oligochitosan fortifies antioxidative and photosynthetic metabolism and enhances secondary metabolite accumulation in arsenic-stressed peppermint

The current study was designed to investigate whether application of irradiated chitosan (ICn), a recently established plant growth promoter, can prove effective in alleviating arsenic (As) stress in peppermint, a medicinally important plant. This study investigated how foliar application of ICn alleviated As toxicity in peppermint (Mentha piperita L.). Peppermint plants were treated with ICn (80 mg L^-1) alone or in combination with As (10, 20, or 40 mg kg^-1 of soil, as Na₂HAsO₄·7H₂O) 40 days after transplantation (DAT), and effects on the growth, photosynthesis, and antioxidants were assessed at 150 DAT as stress severely decreases plant growth, affects photosynthesis, and alters enzymatic (ascorbate peroxidase, superoxide dismutase) and non-enzymatic (glutathione) antioxidants. When applied at 40 mg kg^-1, ICn significantly decreased the content of essential oil (EO) and total phenols in peppermint by 13.8 and 16.0%, respectively, and decreased phenylalanine ammonia lyase (PAL) and deoxy-D-xylulose-5-phosphate reductoisomerase (DXR) activities by 12.8 and 14.6%, respectively. Application of ICn mitigated the disadvantageous effects caused by As toxicity in peppermint by enhancing activities of antioxidative enzymes and photosynthesis and increased accretion of secondary metabolism products (EOs and phenols). An enhancement of total phenols (increased by 17.3%) and EOs (36.4%) is endorsed to ICn-stimulated enhancement in the activities of PAL and DXR (65.9 and 28.9%, respectively) in comparison to the control. To conclude, this study demonstrated that foliar application of ICn (80 mgL^-1) effectively promoted the growth and physiology of peppermint and eliminated As-induced toxicity to achieve high production of EO-containing crops grown in metal-contaminated soils.

Remediation of heavy metal polluted waters using activated carbon from lignocellulosic biomass: An update of recent trends

The use of a cheap and effective adsorption approach based on biomass-activated carbon (AC) to remediate heavy metal contamination is clearly desirable for developing countries that are economically disadvantaged yet have abundant biomass. Therefore, this review provides an update of recent works utilizing biomass waste-AC to adsorb commonly-encountered adsorbates like Cr, Pb, Cu, Cd, Hg, and As. Various biomass wastes were employed in synthesizing AC via two-steps processing; oxygen-free carbonization followed by activation. In recent works related to the activation step, the microwave technique is growing in popularity compared to the more conventional physical/chemical activation method because the microwave technique can ensure a more uniform energy distribution in the solid adsorbent, resulting in enhanced surface area. Nonetheless, chemical activation is still generally preferred for its ease of operation, lower cost, and shorter preparation time. Several mechanisms related to heavy metal adsorption on biomass wastes-AC were also discussed in detail, such as (i) - physical adsorption/deposition of metals, (ii) - ion-exchange between protonated oxygen-containing functional groups (-OH, -COOH) and divalent metal cations (M²⁺), (iii) - electrostatic interaction between oppositely-charged ions, (iv) - surface complexation between functional groups (-OH, O^2-, -CO-NH-, and -COOH) and heavy metal ions/complexes, and (v) - precipitation/co-precipitation technique. Additionally, key parameters affecting the adsorption performance were scrutinized. In general, this review offers a comprehensive insight into the production of AC from lignocellulosic biomass and its application in treating heavy metals-polluted water, showing that biomass-originated AC could bring great benefits to the environment, economy, and sustainability.

Recent advances in arsenic mitigation in rice through biotechnological approaches

Arsenic (As) is a major threat to the environment and human health due to its toxicity and carcinogenicity. Occurrence of alarming concentrations of As in water and soil leads to its bioaccumulation in crops which is a major health concern globally. Rice (Oryza sativa) is a staple food for a large population staying in As contaminated areas so, it is of utmost importance to reduce As levels in rice, especially grains. Amongst several strategies in practice, biotechnology may provide an effective option to reduce As accumulation in rice grains. Genetic engineering can be a viable approach to exploit potential genes playing roles in As metabolism pathway in plants. Besides, developing low As accumulating rice varieties through breeding is also an important area. Identifying genotypic variation in rice is a crucial step toward the development of a safe rice cultivar for growing in As-affected areas. Significant genotypic variation has been found in rice varieties for As accumulation in grains and that is attributable to differential expression of transporters, radial oxygen loss, and other regulators of As stress. This review provides recent updates on the research advances leading to transgenic and breeding approaches adopted to reduce As levels in rice, especially grains.

Arsenic-Induced Oxidative Stress and Antioxidant Defense in Plants

The non-essential metalloid arsenic (As) is widely distributed in soil and underground water of many countries. Arsenic contamination is a concern because it creates threat to food security in terms of crop productivity and food safety. Plants exposed to As show morpho-physiological, growth and developmental disorder which altogether result in loss of productivity. At physiological level, As-induced altered biochemistry in chloroplast, mitochondria, peroxisome, endoplasmic reticulum, cell wall, plasma membrane causes reactive oxygen species (ROS) overgeneration which damage cell through disintegrating the structure of lipids, proteins, and DNA. Therefore, plants tolerance to ROS-induced oxidative stress is a vital strategy for enhancing As tolerance in plants. Plants having enhanced antioxidant defense system show greater tolerance to As toxicity. Depending upon plant diversity (As hyperaccumulator/non-hyperaccumulator or As tolerant/susceptible) the mechanisms of As accumulation, absorption or toxicity response may differ. There can be various crop management practices such as exogenous application of nutrients, hormones, antioxidants, osmolytes, signaling molecules, different chelating agents, microbial inoculants, organic amendments etc. can be effective against As toxicity in plants. There is information gap in understanding the mechanism of As-induced response (damage or tolerance response) in plants. This review presents the mechanism of As uptake and accumulation in plants, physiological responses under As stress, As-induced ROS generation and antioxidant defense system response, various approaches for enhancing As tolerance in plants from the available literatures which will make understanding the to date knowledge, knowledge gap and future guideline to be worked out for the development of As tolerant plant cultivars.

Heteroauxin-producing bacteria enhance the plant growth and lead uptake of Miscanthus floridulus (Lab.)

Soil lead (Pb) contamination has caused severe environmental threats and is in urgent need of remediation. This study was aimed to explore the feasibility of using the Miscanthus-microbe combination to reduce Pb pollution in the farmland surrounding a lead-zinc mining area. We have screened three heteroauxin (IAA)-producing microbes (Lelliottia jeotgali MR2, Klebsiella michiganensis TS8, and Klebsiella michiganensis ZR1) with high Pb tolerance. The IAA-producing ability of the mixed-species was stronger than that of the single bacterium. In pot experiments, the mixed-species of MR2-ZR1 and MR2-TS8 had better performance in enhancing the weight of Miscanthus grass (increased by 22.2-53.6% compared to the control group without inoculating microbes). The remediation efficiency of Pb was significantly higher in the MR2 (30.79%), MR2-TS8 (24.96%), and TS8-ZR1 (21.10%) groups than that in the control group (6.75%). We speculated that MR2 and mixed species of MR2-TS8 and TS8-ZR1 could promote the percentages of activated Pb fractions in soils and increase the Pb uptake of M. floridulus (Lab.). These results implied that the MR2-TS8 mixed-species might be selected as the effective microbial agent to simultaneously enhance the remediation efficiency of Pb-contaminated soils and the biomass of M. floridulus (Lab.).

Arsenic transport and interaction with plant metabolism: Clues for improving agricultural productivity and food safety

Arsenic (As) is a ubiquitous metalloid that is highly toxic to all living organisms. When grown in As-contaminated soils, plants may accumulate significant amounts of As in the grains or edible shoot parts which then enter a food chain. Plant growth and development per se are also both affected by arsenic. These effects are traditionally attributed to As-induced accumulation of reactive oxygen species (ROS) and a consequent lipid peroxidation and damage to cellular membranes. However, this view is oversimplified, as As exposure have a major impact on many metabolic processes in plants, including availability of essential nutrients, photosynthesis, carbohydrate metabolism, lipid metabolism, protein metabolism, and sulfur metabolism. This review is aimed to fill this gap in the knowledge. In addition, the molecular basis of arsenic uptake and transport in plants and prospects of creating low As-accumulating crop species, for both agricultural productivity and food safety, are discussed.

Safe, efficient, and economically beneficial remediation of arsenic-contaminated soil: possible strategies for increasing arsenic tolerance and accumulation in non-edible economically important native plants

Anthropogenic activities, geological processes, and biogenic sources have led to the enhanced concentration of arsenic (As), a toxic metalloid in water and soil. Non-edible, economically important plants can be employed for safe As phytoremediation in addition to generating extra income. However, these plants may get affected by stressful local environmental conditions. Native plant species are adapted to local environmental conditions and hence overcome this problem. Native non-edible economic plant species which show high As tolerance and accumulation are promising candidate for safe, efficient, and economically beneficial phytoremediation of As-contaminated sites. The current review discusses the potential of native economic plant species that can be used in As phytoremediation programme. However, since their phytoremediation potential is moderate, possible strategies for increasing As  olerance and accumulation, especially genetic modification, have been discussed in detail. Knowledge gained from the review can be used for the development of As tolerance and accumulation in non-edible economic native plants.

Proteomics and transcriptomic analysis of Micrococcus luteus strain AS2 under arsenite stress and its potential role in arsenic removal

•

M. luteus strain AS2 showed hyper-tolerance against arsenite upto 50 mM.

•

Thioredoxin reductase, involved in As-resistance, upregulated 2.8 folds under arsenite stress.

•

The maximum metal oxidizing processing ability of the strain AS2 was 90%.

The proteomics and transcriptomic analysis of Micrococcus luteus strain AS2 was carried out through 2D gel electrophoresis and RT-PCR. Seven protein spots were selected randomly from the gel and identified through mass spectrometry. Four proteins including putative metal-dependent hydrolase TatD, thioredoxin reductase, DNA-directed RNA polymerase subunit alpha and chaperone protein DnaK were upregulated while superoxide dismutase [Mn], 3-oxoacyl-[acyl-carrier-protein] reductase FabG, and putative alkyl/aryl-sulfatase YjcS were down-regulated under arsenite stress. No significant difference was observed in aioB gene expression analysis in the presence and absence of arsenite. The optimum arsenite processing ability was determined at 37°C (90%) and at pH 7 (92%). The maximum metal processing ability was determined at 250 mM arsenite/L (90%) while the minimum was estimated at 1250 mM arsenite/L (42%). The maximum arsenite removal ability of strain AS2 determined after 8 days was 68 and 82% from wastewater and distilled water, and the organism can be a good bioresource for green chemistry to eradicate environmental arsenite.

Abscisic acid priming regulates arsenite toxicity in two contrasting rice (Oryza sativa L.) genotypes through differential functioning of sub1A quantitative trait loci

Arsenite [As(III)] toxicity causes impeded growth, inadequate productivity of plants and toxicity through the food chain. Using various chemical residues for priming is one of the approaches in conferring arsenic tolerance in crops. We investigated the mechanism of abscisic acid (ABA)-induced As(III) tolerance in rice genotypes (cv. Swarna and Swarna Sub1) pretreated with 10 μM of ABA for 24 h and transferred into 0, 25 and 50 μM arsenic for 10 days. Plants showed a dose-dependent bioaccumulation of As(III), oxidative stress indicators like superoxide, hydrogen peroxide, thiobarbituric acid reactive substances and the activity of lipoxygenase. As(III) had disrupted cellular redox that reflecting growth indices like net assimilation rate, relative growth rate, specific leaf weight, leaf mass ratio, relative water content, proline, delta-1-pyrroline-5-carboxylate synthetase and electrolyte leakage. ABA priming was more protective in cv. Swarna Sub1 than Swarna for retrieval of total glutathione pool, non-protein thiols, cysteine, phytochelatin and glutathione reductase. Phosphate metabolisms were significantly curtailed irrespective of genotypes where ABA had moderated phosphate uptake and its metabolizing enzymes like acid phosphatase, alkaline phosphatase and H⁺/ATPase. Rice seedlings had regulated antioxidative potential with the varied polymorphic expression of those enzymes markedly with antioxidative enzymes. The results have given the possible cellular and physiological traits those may interact with ABA priming in the establishment of plant tolerance with As(III) over accumulation and, thereby, its amelioration for oxidative damages. Finally, cv. Swarna Sub1 was identified as a rice genotype as a candidate for breeding program for sustainability against As(III) stress with cellular and physiological traits serving better for selection pressure.

Magnetopriming effects on arsenic stress-induced morphological and physiological variations in soybean involving synchrotron imaging

This study investigates the effect of static magnetic field (SMF) pre-treatment in ameliorating arsenic (As) toxicity in soybean plants in relation to growth, photosynthesis and water transport through leaf venation. Soybean (Glycine max variety JS-9560) seeds pre-treated with SMF (200 mT for 1 h) were grown in four levels of arsenate-polluted soil (As(V); 0, 5, 10 and 50 mg kg-1 ) in order to find out the impact of magnetopriming on plant tolerance against As toxicity. Quantitative image analysis of soybean leaf venation showed a narrowing in the width of midrib with increasing As(V) contamination in non-primed seeds. The morphological variations are also supported by the physiological parameters such as reduction in efficiency of photosystem II, plant performance index, stomatal conductance and photosynthetic rate in the presence of As(V) for non-primed seeds. However, remarkable increase was observed in all the measured parameters by SMF pre-treatment at all the concentrations of As(V) used. Even for the highest concentration of As(V) (50 mg kg-1 soil), SMF pre-treatment caused significant enhancement in plant height (40%), area of third trifoliate leaves (40%), along with increase in width of the midrib (17%) and minor vein (13%), contributing to increase in the water uptake, that resulted in higher primary photochemistry of PSII (12%), performance index (50%), stomatal conductance (57%) and photosynthetic rate (33%) as compared to non-primed ones. Consequently, magnetopriming of dry seeds can be effectively used as pretreatment for reduction of As toxicity in soybean plants.

Arsenic Remediation through Sustainable Phytoremediation Approaches

Arsenic contamination of the environment is a serious problem threatening the health of millions of people exposed to arsenic (As) via drinking water and crops grown in contaminated areas. The remediation of As-contaminated soil and water bodies needs to be sustainable, low-cost and feasible to apply in the most affected low-to-middle income countries, like India and Bangladesh. Phytoremediation is an aesthetically appreciable and successful approach that can be used for As decontamination with use of the best approach(es) and the most promising plant(s). However, phytoremediation lacks the required speed and sometimes the stress caused by As could diminish plants’ potential for remediation. To tackle these demerits, we need augment plants’ potential with appropriate technological methods including microbial and nanoparticles applications and genetic modification of plants to alleviate the As stress and enhance As accumulation in phytoremediator plants. The present review discusses the As phytoremediation prospects of soil and water bodies and the usefulness of various plant systems in terms of high biomass, high As accumulation, bioenergy potential, and economic utility. The potential and prospects of assisted phytoremediation approaches are also presented.

Silver Nanoparticle's Toxicological Effects and Phytoremediation

The advancement in nanotechnology has brought numerous benefits for humans in diverse areas including industry, medicine, and agriculture. The demand in the application of nanomaterials can result in the release of these anthropogenic materials into soil and water that can potentially harm the environment by affecting water and soil properties (e.g., soil texture, pH, organic matter, and water content), plants, animals, and subsequently human health. The properties of nanoparticles including their size, surface area, and reactivity affect their fate in the environment and can potentially result in their toxicological effects in the ecosystem and on living organisms. There is extensive research on the application of nano-based materials and the consequences of their release into the environment. However, there is little information about environmentally friendly approaches for removing nanomaterials from the environment. This article provides insight into the application of silver nanoparticles (AgNPs), as one of the most commonly used nanomaterials, their toxicological effects, their impacts on plants and microorganisms, and briefly reviews the possibility of remediation of these metabolites using phytotechnology approaches. This article provides invaluable information to better understand the fate of nanomaterials in the environment and strategies in removing them from the environment.

Identification of novel heavy metal detoxification proteins in Solanum tuberosum: Insights to improve food security protection from metal ion stress

With increasingly serious environmental pollution problems, research has focused on identifying functional genes within plants that can help ensure food security and soil governance. In particular, plants seem to have been able to evolve specific functional genes to respond to environmental changes by losing partial gene functions, thereby representing a novel adaptation mechanism. Herein, a new category of functional genes was identified and investigated, providing new directions for understanding heavy metal detoxification mechanisms. Interestingly, this category of proteins appears to exhibit specific complexing functions for heavy metals. Further, a new approach was established to evaluate ATP-binding cassette (ABC) transporter family functions using microRNA targeted inhibition. Moreover, mutant and functional genes were identified for future research targets. Expression profiling under five heavy metal stress treatments provided an important framework to further study defense responses of plants to metal exposure. In conclusion, the new insights identified here provide a theoretical basis and reference to better understand the mechanisms of heavy metal tolerance in potato plants. Further, these new data provide additional directions and foundations for mining gene resources for heavy metal tolerance genes to improve safe, green crop production and plant treatment of heavy metal soil pollution.

Regulatory hubs and strategies for improving heavy metal tolerance in plants: Chemical messengers, omics and genetic engineering

Heavy metal (HM) accumulation in the agricultural soil and its toxicity is a major threat for plant growth and development. HMs disrupt functional integrity of the plants, induces altered phenological and physiological responses and slashes down qualitative crop yield. Chemical messengers such as phytohormones, plant growth regulators and gasotransmitters play a crucial role in regulating plant growth and development under metal toxicity in plants. Understanding the intricate network of these chemical messengers as well as interactions of genes/metabolites/proteins associated with HM toxicity in plants is necessary for deciphering insights into the regulatory circuit involved in HM tolerance. The present review describes (a) the role of chemical messengers in HM-induced toxicity mitigation, (b) possible crosstalk between phytohormones and other signaling cascades involved in plants HM tolerance and (c) the recent advancements in biotechnological interventions including genetic engineering, genome editing and omics approaches to provide a step ahead in making of improved plant against HM toxicities.

An amiRNA screen uncovers redundant CBF and ERF34/35 transcription factors that differentially regulate arsenite and cadmium responses

Arsenic stress causes rapid transcriptional responses in plants. However, transcriptional regulators of arsenic-induced gene expression in plants remain less well known. To date, forward genetic screens have proven limited for dissecting arsenic response mechanisms. We hypothesized that this may be due to the extensive genetic redundancy present in plant genomes. To overcome this limitation, we pursued a forward genetic screen for arsenite tolerance using a randomized library of plants expressing >2,000 artificial microRNAs (amiRNAs). This library was designed to knock-down diverse combinations of homologous gene family members within sub-clades of transcription factor and transporter gene families. We identified six transformant lines showing an altered response to arsenite in root growth assays. Further characterization of an amiRNA line targeting closely homologous CBF and ERF transcription factors show that the CBF1,2 and 3 transcription factors negatively regulate arsenite sensitivity. Furthermore, the ERF34 and ERF35 transcription factors are required for cadmium resistance. Generation of CRISPR lines, higher-order T-DNA mutants and gene expression analyses, further support our findings. These ERF transcription factors differentially regulate arsenite sensitivity and cadmium tolerance.

Chemical intervention for enhancing growth and reducing grain arsenic accumulation in rice

Arsenic (As) is a ubiquitous environmental carcinogen that enters the human food chain mainly through rice grains. In the present study, we evaluated the potential of thiourea (TU; non-physiological reactive oxygen species scavenger) in mitigating the negative effects of arsenic (As) stress in indica rice variety IR64, with the overall aim to reduce grain As accumulation. At seedling stage, As + TU treatment induced the formation of more numerous and longer crown roots compared with As alone. The As accumulation in main root, crown root, lower leaf and upper leaf was significantly reduced to 0.1-, 0.14-, 0.16-, 0.14-fold, respectively in As + TU treated seedlings compared with those of As alone. This reduced As accumulation was also coincided with light-dependent suppression in the expression levels of aquaporins and photosynthesis-related genes in As + TU treated roots. In addition, the foliar-supplemented TU under As-stress maintained reducing redox conditions which decreased the rate of As accumulation in flag leaves and, eventually grain As by 0.53-fold compared with those of As treatment. The agronomic feasibility of TU was validated under naturally As contaminated sites of Nadia (West Bengal, India). The tiller numbers and crop productivity (kg seed/ha) of TU-sprayed plants were increased by 1.5- and 1.18-fold, respectively; while, grain As accumulation was reduced by 0.36-fold compared with those of water-sprayed control. Thus, this study established TU application as a sustainable solution for cultivating rice in As-contaminated field conditions.

Tracking the time-dependent and tissue-specific processes of arsenic accumulation and stress responses in rice (Oryza sativa L.)

The present study analysed time (0.5 h to 24 h) and tissue [roots, old leaves (OL) and young leaves (YL)] dependent nature of arsenic (As) accumulation and ensuing responses in two contrasting varieties of rice (Oryza sativa L.); Pooja (tolerant) and CO-50 (moderately sensitive). Arsenic accumulation was 5.4-, 4.7- and 7.3-fold higher at 24 h in roots, OL and YL, respectively of var. CO-50 than that in var. Pooja. Arsenic accumulation in YL depicted a delayed accumulation; at 2 h onwards in var. Pooja (0.23 µg g^-1 dw) while at 1 h onwards in var. CO50 (0.26 µg g^-1 dw). The responses of oxidative stress parameters, antioxidant enzymes, metabolites and ions were also found to be tissue- and time-dependent and depicted differential pattern in the two varieties. Among hormone, salicylic acid and abscisic acid showed variable response in var. Pooja and var. CO-50. Metabolite analysis depicted an involvement of various metabolites in As stress responses of two varieties. In conclusion, an early sensing of the As stress, proper coordination of hormones, biochemical responses, ionic and metabolic profiles allowed var. Pooja to resist As stress and reduce As accumulation more effectively as compared to that of var. CO-50.

Mitigation of arsenate toxicity by indole-3-acetic acid in brinjal roots: Plausible association with endogenous hydrogen peroxide

The role of indole-3-acetic acid (IAA) and hydrogen peroxide (H₂O₂) crosstalk in regulating metal stress is still less known. Herein, role of IAA in alleviating arsenate (As^V) toxicity in brinjal seedlings along with its probable relation with endogenous H₂O₂ was investigated. Arsenate hampered root growth due to greater accumulation of As and decrease in phosphorus uptake that resulted into inhibited photosynthesis and cell death. Further, As^V induced oxidative stress markers and damage to macromolecules (lipids and proteins) due to alterations in redox status of glutathione as a result of inhibition in activity of glutathione synthetase and glutathione reductase. However, application of IAA with As^V improved root growth by significantly declining As accumulation and oxidative stress markers, sequestrating As into vacuoles, and improving redox status of glutathione which collectively protected roots from cell death. Interestingly, addition of diphenylene iodonium (DPI, an inhibitor of NADPH oxidase) further increased As^V toxicity even in the presence of IAA. However, application of H₂O₂ rescued negative effect of DPI. Overall, the results suggested that in IAA-mediated mitigation of As^V toxicity in brinjal roots, endogenous H₂O₂ might have acted as a downstream signal.

Advanced application of nano-technological and biological processes as well as mitigation options for arsenic removal

Arsenic (As) removal is a huge challenge, since several million people are potentially exposed (>10 μg/L World Health Organization guideline limit) through As contaminated drinking water worldwide. Review attempts to address the present situation of As removal, considering key topics on nano-technological and biological process and current progress and future perspectives of possible mitigation options have been evaluated. Different physical, chemical and biological methods are available to remove As from contaminated water/soil/wastes, where removal efficiency mainly depends on absorbent type, initial adsorbate concentration, speciation and interfering species. Oxidation is an important pretreatment step in As removal, which is generally achieved by several media such as O₂/O₃, HClO, KMnO₄ and H₂O₂. The Fe-based-nanomaterials (α/β/γ-FeOOH, Fe₂O₃/Fe₃O₄-γ-Fe₂O₃), Fe-based-composite-compounds, activated-Al₂O₃, HFO, Fe-Al₂O₃, Fe₂O₃-impregnated-graphene-aerogel, iron-doped-TiO₂, aerogel-based- CeTiO₂, and iron-oxide-coated-manganese are effective to remove As from contaminated water. Biological processes (phytoremediation/microbiological) are effective and ecofriendly for As removal from water and/or soil environment. Microorganisms remove As from water, sediments and soil by metabolism, detoxification, oxidation-reduction, bio-adsorption, bio-precipitation, and volatilization processes. Ecofriendly As mitigation options can be achieved by utilizing an alternative As-safe-aquifer, surface-water or rainwater-harvesting. Application of hybrid (biological with chemical and physical process) and Best-Available-Technologies (BAT) can be the most effective As removal strategy to remediate As contaminated environments.

In situ phytoremediation of heavy metal-contaminated soil and groundwater: a green inventive approach

The heavy metal contamination of soil and groundwater is a serious threat to environment worldwide. The survival of human being primarily relies upon soil and groundwater sources. Therefore, the remediation of heavy metal-contaminated soil and groundwater is a matter of utmost concern. Heavy metals are non-degradable and persist in the environment and subsequently contaminate the food chain. Heavy metal pollution puts a serious impact on human health and it adversely affects our physical body. Although, numerous in situ conventional technologies have been utilized for the treatment purpose, but most of the techniques have some limitations such as high cost, deterioration of soil properties, disturbances to soil native flora and fauna and intensive labour. Despite that, in situ phytoremediation is a cost-effective, eco-friendly, solar-driven and novel approach with significant public acceptance. The past research reflects rare discussion addressing both (heavy metal in situ phytoremediation of soil and groundwater) in one platform. The present review article covers both the concepts of in situ phytoremediation of soil and groundwater with major emphasis on health risks of heavy metals, enhanced integrated approaches of in situ phytoremediation, mechanisms of in situ phytoremediation along with effective hyperaccumulator plants for heavy metals remediation, challenges and future prospects.

Responses of glutathione and phytochelatins biosysthesis in a cadmium accumulator of Perilla frutescens (L.) Britt. under cadmium contaminated conditions

Screening new accumulators of heavy metal and identifying their tolerance, enrichment capacity of heavy metals are currently hot issues in phytoremediation research. A series of hydroponic experiments were conducted to analyze the effects of glutathione and phytochelatins in roots, stems, and leaves of Perilla frutescens under cadmium stress. The results showed that the non-protein thiols in roots and stems mainly existed in the form of GSH, PC₂, PC₃, and PC₄ under Cd stress condition, while in leaves they existed in the form of GSH, PC₂, and PC₃. Furthermore, the contents of GSH and PCs positively correlated with Cd, but negatively correlated with root vigor and chlorophyll content under Cd stress conditions. After 21 days of treatments, the contents of Cd in different parts of the plant were 1465.2-3092.9 mg· kg^-1 in the roots, 199.6-478.4 mg·kg^-1 in the stems and 61.3-96.9 mg· kg^-1 in the leaves at 2, 5, 10 mg·L^-1 Cd levels respectively, and the amount of Cd uptakes were up to 3547.7-5701.7 μg·plant^-1. Therefore, P. frutescens performed high capacity in Cd accumulation, and PCs played a key role in Cd tolerance. The application prospect of the plant in phytoremediation Cd polluted soil was also discussed.

Prospect of phytoremediation combined with other approaches for remediation of heavy metal-polluted soils

Accumulation of heavy metals in agricultural soils due to human production activities-mining, fossil fuel combustion, and application of chemical fertilizers/pesticides-results in severe environmental pollution. As the transmission of heavy metals through the food chain and their accumulation pose a serious risk to human health and safety, there has been increasing attention in the investigation of heavy metal pollution and search for effective soil remediation technologies. Here, we summarized and discussed the basic principles, strengths and weaknesses, and limitations of common standalone approaches such as those based on physics, chemistry, and biology, emphasizing their incompatibility with large-scale applications. Moreover, we explained the effects, advantages, and disadvantages of the combinations of common single repair approaches. We highlighted the latest research advances and prospects in phytoremediation-chemical, phytoremediation-microbe, and phytoremediation-genetic engineering combined with remediation approaches by changing metal availability, improving plant tolerance, promoting plant growth, improving phytoextraction and phytostabilization, etc. We then explained the improved safety and applicability of phytoremediation combined with other repair approaches compared to common standalone approaches. Finally, we established a prospective research direction of phytoremediation combined with multi-technology repair strategy.

Expression of New Pteris vittata Phosphate Transporter PvPht1;4 Reduces Arsenic Translocation from the Roots to Shoots in Tobacco Plants

Arsenic-hyperaccumulator Pteris vittata is efficient in As uptake, probably through phosphate transporters (Pht). Here, for the first time, we cloned a new PvPht1;4 gene from P. vittata and investigated its role in arsenate (AsV) uptake and transport in yeast and transgenic tobacco plants. On the basis of quantitative real-time polymerase chain reaction (qRT-PCR), PvPht1;4 was abundantly expressed in P. vittata fronds and roots, with its transcripts in the roots being induced by both P deficiency and As exposure. PvPht1;4 was localized to the plasma membrane, which complemented a yeast-mutant defective in P uptake and showed higher P transport affinity than PvPht1;3. Under AsV exposure, PvPht1;4 yeast transformants showed comparable tolerance as PvPht1;3, but higher As accumulation than PvPht1;2 transformants, indicating that PvPht1;4 had considerable AsV and P transport activity. However, in soil and hydroponic experiments, PvPht1;4 expressing tobacco lines accumulated 26-44 and 37-55% lower As in the shoots than wild type plants, with lower root-to-shoot As translocation. In the roots of PvPht1;4 lines, higher glutathione (GSH) contents and expression levels of GSH synthetase gene NtGSH2 were observed. In addition, the transcripts of AsIII-GSH transporter NtABCC1 in PvPht1;4 lines were upregulated. The data suggested that PvPht1;4 lines probably detoxified As by reducing AsV to AsIII, which was then complexed with GSH and stored in the root vacuoles, thereby reducing As translocation in transgenic tobacco. Given its strong AsV transport capacity, expression of PvPht1;4 provides a new molecular approach to reduce As accumulation in plant shoots.

Mechanisms of arsenic assimilation by plants and countermeasures to attenuate its accumulation in crops other than rice

Arsenic is a ubiquitous metalloid in the biosphere, and its origin can be either geogenic or anthropic. Four oxidation states (-3, 0, +3 and + 5) characterize organic and inorganic As- compounds. Although arsenic is reportedly a toxicant, its harmful effects are closely related to its chemical form: inorganic compounds are most toxic, followed by organic ones and finally by arsine gas. Although drinking water is the primary source of arsenic exposure to humans, the metalloid enters the food chain through its uptake by crops, the extent of which is tightly dependent on its phytoavailability. Arsenate is taken up by roots via phosphate carriers, while arsenite is taken up by a subclass of aquaporins (NIP), some of which involved in silicon (Si) transport. NIP and Si transporters are also involved in the uptake of methylated forms of As. Once taken up, its distribution is regulated by the same type of transporters albeit with mobility efficiencies depending on As forms and its accumulation generally occurs in the following decreasing order: roots > stems > leaves > fruits (seeds). Besides providing a survey on the uptake and transport mechanisms in higher plants, this review reports on measures able to reducing plant uptake and the ensuing transfer into edible parts. On the one hand, these measures include a variety of plant-based approaches including breeding, genetic engineering of transport systems, graft/rootstock combinations, and mycorrhization. On the other hand, they include agronomic practices with a particular focus on the use of inorganic and organic amendments, treatment of irrigation water, and fertilization.

Targeting Acr3 from Ensifer medicae to the plasma membrane or to the tonoplast of tobacco hairy roots allows arsenic extrusion or improved accumulation. Effect of acr3 expression on the root transcriptome

Transgenic tobacco hairy roots expressing the bacterial arsenite efflux pump Acr3 from Ensifer medicae were generated. The gene product was targeted either to the plasma membrane (ACR3 lines) or to the tonoplast by fusing the ACR3 protein to the tonoplast integral protein TIP1.1 (TIP-ACR3 lines). Roots expressing Acr3 at the tonoplast showed greater biomass than those expressing Acr3 at the plasma membrane. Furthermore, higher contents of malondialdehyde (MDA) and RNA degradation in ACR3 lines were indicative of higher oxidative stress. The determination of ROS-scavenging enzymes depicted the transient role of peroxidases in ROS detoxification, followed by the action of superoxide dismutase during both short- and medium-term exposure periods. Regarding As accumulation, ACR3 lines accumulated up to 20-30% less As, whereas TIP-ACR3 achieved a 2-fold increase in As accumulation in comparison to control hairy roots. Strategies that presumably induce As uptake, such as phosphate deprivation or dehydration followed by rehydration in the presence of As, fostered As accumulation up to 10 800 μg g-1. Finally, the effects of the heterologous expression of acr3 on the root transcriptome were assessed. Expression at the plasma membrane induced drastic changes in gene expression, with outstanding overexpression of genes related to electron transport, ATP synthesis and ATPases, suggesting that As efflux is the main detoxification mechanism in these lines. In addition, genes encoding heat shock proteins and those related to proline synthesis and drought tolerance were activated. On the other hand, TIP-ACR3 lines showed a similar gene expression profile to that of control roots, with overexpression of the glutathione and phytochelatin synthesis pathways, together with secondary metabolism pathways as the most important resistance mechanisms in TIP-ACR3, for which As allocation into the vacuole allowed better growth and stress management. Our results suggest that modulation of As accumulation can be achieved by subcellular targeting of Acr3: expression at the tonoplast enhances As accumulation in roots, whereas expression at the plasma membrane could promote As efflux. Thus, both approaches open the possibilities for developing safer crops when grown on As-polluted paddy soils, but expression at the tonoplast leads to better growth and less stressed roots, since the high energy cost of As efflux likely compromises growth in ACR3 lines.

Involvement of glutathione and glutathione metabolizing enzymes in Pistia stratiotes tolerance to arsenite

Glutathione is essential for plant tolerance to arsenic but few studies have focused on the coordination between the enzymes involved in its metabolism. We exposed Pistia stratiotes to four treatments (control, 5, 10 and 20 µM As^III) for 24 h to evaluate the role of glutathione metabolism in arsenic response and determined the arsenic uptake, growth, membrane integrity, glutathione concentration and enzyme activities (γ-glutamyl-cysteine synthetase, glutathione reductase, glutathione peroxidase, and glutathione-S-transferase). Despite absorbing high concentrations of As^III, plants maintained growth and cell membrane integrity when exposed to concentrations of up to 10 µM As^III. The maintenance of these parameters involved glutathione concentration increase due to an increase in its biosynthetic pathway (higher γ-glutamyl-cysteine synthetase). In addition, an increase in the activity of glutathione reductase, glutathione peroxidase and glutathione-S-transferase also contributed to the conserve the cellular homeostasis. However, at the concentration of 20 µM As^III, the high toxicity of As^III affected glutathione concentration and glutathione metabolizing enzymes activities, which resulted in drastic decrease in growth and damage to cell membranes. These results showed that not only the glutathione concentration but also the coordination of the enzymes involved in the synthesis, oxidation and reduction pathways of glutathione is essential for As^III tolerance.