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Pickering L, Castro-Gutierrez V, Holden B, Haley J, Jarvis P, Campo P, Hassard F. How bioaugmentation for pesticide removal influences the microbial community in biologically active sand filters. CHEMOSPHERE 2024; 363:142956. [PMID: 39074664 DOI: 10.1016/j.chemosphere.2024.142956] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2024] [Revised: 07/10/2024] [Accepted: 07/25/2024] [Indexed: 07/31/2024]
Abstract
Removing pesticides from biological drinking water filters is challenging due to the difficulty in activating pesticide-degrading bacteria within the filters. Bioaugmented bacteria can alter the filter's microbiome, affecting its performance either positively or negatively, depending on the bacteria used and their interaction with native microbes. We demonstrate that adding specific bacteria strains can effectively remove recalcitrant pesticides, like metaldehyde, yielding compliance to regulatory standards for an extended period. Our experiments revealed that the Sphingobium CMET-H strain was particularly effective, consistently reducing metaldehyde concentrations to levels within regulatory compliance, significantly outperforming Acinetobacter calcoaceticus E1. This success is attributed to the superior acclimation and distribution of the Sphingobium strain within the filter bed, facilitating more efficient interactions with and degradation of the pesticide, even when present at lower population densities compared to Acinetobacter calcoaceticus E1. Furthermore, our study demonstrates that the addition of pesticide-degrading strains significantly impacts the filter's microbiome at various depths, despite these strains making up less than 1% of the total microbial community. The sequence in which these bacteria are introduced influences the system's ability to degrade pesticides effectively. This research shows the potential of carefully selected and dosed bioaugmented bacteria to improve the pesticide removal capabilities of water filtration systems, while also highlighting the dynamics between bioaugmented and native microbial communities. Further investigation into optimizing bioaugmentation strategies is suggested to enhance the resilience and efficiency of drinking water treatment systems against pesticide contamination.
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Affiliation(s)
- Laura Pickering
- Cranfield University, College Road, Cranfield, Bedfordshire, MK43 0AL, UK
| | - Victor Castro-Gutierrez
- Environmental Pollution Research Center (CICA), University of Costa Rica, Montes de Oca, 11501, Costa Rica
| | | | - John Haley
- UK Water Industry Research Limited, London, UK
| | - Peter Jarvis
- Cranfield University, College Road, Cranfield, Bedfordshire, MK43 0AL, UK
| | - Pablo Campo
- Cranfield University, College Road, Cranfield, Bedfordshire, MK43 0AL, UK
| | - Francis Hassard
- Cranfield University, College Road, Cranfield, Bedfordshire, MK43 0AL, UK.
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2
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Gao M, Li X, Zhang Q, Li S, Wu S, Wang Y, Sun H. Spatial distribution of volatile organic compounds in contaminated soil and distinct microbial effect driven by aerobic and anaerobic conditions. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 927:172256. [PMID: 38583613 DOI: 10.1016/j.scitotenv.2024.172256] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Revised: 04/01/2024] [Accepted: 04/04/2024] [Indexed: 04/09/2024]
Abstract
The vertical distribution of 35 volatile organic compounds (VOCs) was investigated in soil columns from two obsolete industrial sites in Eastern China. The total concentrations of ΣVOCs in surface soils (0-20 cm) were 134-1664 ng g-1. Contamination of VOCs in surface soil exhibited remarkable variability, closely related to previous production activities at the sampling sites. Additionally, the concentrations of ΣVOCs varied with increasing soil depth from 0 to 10 m. Soils at depth of 2 m showed ΣVOCs concentrations of 127-47,389 ng g-1. Among the studied VOCs, xylene was the predominant contaminant in subsoils (2 m), with concentrations ranging from n.d. to 45,400 ng g-1. Chlorinated alkanes and olefins demonstrated a greater downward migration ability compared to monoaromatic hydrocarbons, likely due to their lower hydrophobicity. As a result, this vertical distribution of VOCs led to a high ecological risk in both the surface and deep soil. Notably, the risk quotient (RQ) of xylene in subsoil (2 m, RQ up to 319) was much higher than that in surface soil. Furthermore, distinct effects of VOCs on soil microbes were observed under aerobic and anaerobic conditions. Specifically, after the 30-d incubation of xylene-contaminated soil, Ilumatobacter was enriched under aerobic condition, whereas Anaerolineaceae was enriched under anaerobic condition. Moreover, xylene contamination significantly affected methylotrophy and methanol oxidation functions for aerobic soil (t-test, p < 0.05). However, aromatic compound degradation and ammonification were significantly enhanced by xylene in anaerobic soil (t-test, p < 0.05). These findings suggest that specific VOC compound has distinct microbial ecological effects under different oxygen content conditions in soil. Therefore, when conducting soil risk assessments of VOCs, it is crucial to consider their ecological effects at different soil depths.
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Affiliation(s)
- Meng Gao
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Xuelin Li
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Qiuyue Zhang
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Siyuan Li
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Shanxing Wu
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
| | - Yu Wang
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China.
| | - Hongwen Sun
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin 300350, China
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3
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Fang X, Zhang M, Zheng P, Wang H, Wang K, Lv J, Shi F. Biochar-bacteria-plant combined potential for remediation of oil-contaminated soil. Front Microbiol 2024; 15:1343366. [PMID: 38835489 PMCID: PMC11148334 DOI: 10.3389/fmicb.2024.1343366] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2023] [Accepted: 04/26/2024] [Indexed: 06/06/2024] Open
Abstract
Oil pollution is a common type of soil organic pollution that is harmful to the ecosystem. Bioremediation, particularly microbe-assisted phytoremediation of oil-contaminated soil, has become a research hotspot in recent years. In order to explore more appropriate bioremediation strategies for soil oil contamination and the mechanism of remediation, we compared the remediation effects of three plants when applied in combination with a microbial agent and biochar. The combined remediation approach of Tagetes erecta, microbial agent, and biochar exhibited the best plant growth and the highest total petroleum hydrocarbons degradation efficiency (76.60%). In addition, all of the remediation methods provided varying degrees of restoration of carbon and nitrogen contents of soils. High-throughput sequencing found that microbial community diversity and richness were enhanced in most restored soils. Some soil microorganisms associated with oil degradation and plant growth promotion such as Cavicella, C1_B045, Sphingomonas, MND1, Bacillus and Ramlibacter were identified in this study, among which Bacillus was the major component in the microbial agent. Bacillus was positively correlated with all soil remediation indicators tested and was substantially enriched in the rhizosphere of T. erecta. Functional gene prediction of the soil bacterial community based on the KEGG database revealed that pathways of carbohydrate metabolism and amino acid metabolism were up-regulated during remediation of oil-contaminated soils. This study provides a potential method for efficient remediation of oil-contaminated soils and thoroughly examines the biochar-bacteria-plant combined remediation mechanisms of oil-contaminated soil, as well as the combined effects from the perspective of soil bacterial communities.
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Affiliation(s)
- Xin Fang
- College of Life Sciences, Nankai University, Tianjin, China
| | - Mei Zhang
- College of Life Sciences, Nankai University, Tianjin, China
| | - Pufan Zheng
- Key Laboratory of Storage and Preservation of Agricultural Products, Ministry of Agriculture and Rural Affairs, Tianjin Key Laboratory of Postharvest Physiology and Storage and Preservation of Agricultural Products, Institute of Agricultural Products Preservation and Processing Technology, Tianjin Academy of Agricultural Sciences (National Research Center of Agricultural Products Preservation Engineering and Technology (Tianjin)), Tianjin, China
| | - Haomin Wang
- College of Life Sciences, Nankai University, Tianjin, China
| | - Kefan Wang
- College of Life Sciences, Nankai University, Tianjin, China
| | - Juan Lv
- School of Environmental Science and Engineering, Tiangong University, Tianjin, China
| | - Fuchen Shi
- College of Life Sciences, Nankai University, Tianjin, China
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4
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Ali M, Wang Q, Zhang Z, Chen X, Ma M, Tang Z, Li R, Tang B, Li Z, Huang X, Song X. Mechanisms of benzene and benzo[a]pyrene biodegradation in the individually and mixed contaminated soils. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 347:123710. [PMID: 38458518 DOI: 10.1016/j.envpol.2024.123710] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Revised: 02/25/2024] [Accepted: 03/02/2024] [Indexed: 03/10/2024]
Abstract
There is a lack of knowledge on the biodegradation mechanisms of benzene and benzo [a]pyrene (BaP), representative compounds of polycyclic aromatic hydrocarbons (PAHs), and benzene, toluene, ethylbenzene, and xylene (BTEX), under individually and mixed contaminated soils. Therefore, a set of microcosm experiments were conducted to explore the influence of benzene and BaP on biodegradation under individual and mixed contaminated condition, and their subsequent influence on native microbial consortium. The results revealed that the total mass loss of benzene was 56.0% under benzene and BaP mixed contamination, which was less than that of individual benzene contamination (78.3%). On the other hand, the mass loss of BaP was slightly boosted to 17.6% under the condition of benzene mixed contamination with BaP from that of individual BaP contamination (14.4%). The significant differences between the microbial and biocide treatments for both benzene and BaP removal demonstrated that microbial degradation played a crucial role in the mass loss for both contaminants. In addition, the microbial analyses revealed that the contamination of benzene played a major role in the fluctuations of microbial compositions under co-contaminated conditions. Rhodococcus, Nocardioides, Gailla, and norank_c_Gitt-GS-136 performed a major role in benzene biodegradation under individual and mixed contaminated conditions while Rhodococcus, Noviherbaspirillum, and Phenylobacterium were highly involved in BaP biodegradation. Moreover, binary benzene and BaP contamination highly reduced the Rhodococcus abundance, indicating the toxic influence of co-contamination on the functional key genus. Enzymatic activities revealed that catalase, lipase, and dehydrogenase activities proliferated while polyphenol oxidase was reduced with contamination compared to the control treatment. These results provided the fundamental information to facilitate the development of more efficient bioremediation strategies, which can be tailored to specific remediation of different contamination scenarios.
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Affiliation(s)
- Mukhtiar Ali
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China; Advanced Water Technology Laboratory, National University of Singapore (Suzhou) Research Institute, Suzhou, Jiangsu 215123, China
| | - Qing Wang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Zhuanxia Zhang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xing Chen
- China Construction 8th Engineering Division Corp., LTD, Shanghai 200122, China
| | - Min Ma
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Zhiwen Tang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Rui Li
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Biao Tang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Zhongyuan Li
- China Construction 8th Engineering Division Corp., LTD, Shanghai 200122, China
| | - Xiangfeng Huang
- China Construction 8th Engineering Division Corp., LTD, Shanghai 200122, China
| | - Xin Song
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China.
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5
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Lü H, Tang GX, Huang YH, Mo CH, Zhao HM, Xiang L, Li YW, Li H, Cai QY, Li QX. Response and adaptation of rhizosphere microbiome to organic pollutants with enriching pollutant-degraders and genes for bioremediation: A critical review. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 912:169425. [PMID: 38128666 DOI: 10.1016/j.scitotenv.2023.169425] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Revised: 12/13/2023] [Accepted: 12/14/2023] [Indexed: 12/23/2023]
Abstract
Phytoremediation largely involves microbial degradation of organic pollutants in rhizosphere for removing organic pollutants like polycyclic aromatic hydrocarbons, phthalates and polychlorinated biphenyls. Microbial community in rhizosphere experiences complex processes of response-adaptation-feedback up on exposure to organic pollutants. This review summarizes recent research on the response and adaptation of rhizosphere microbial community to the stress of organic pollutants, and discusses the enrichment of the pollutant-degrading microbial community and genes in the rhizosphere for promoting bioremediation. Soil pollution by organic contaminants often reduces the diversity of rhizosphere microbial community, and changes its functions. Responses vary among rhizosphere microbiomes up on different classes of organic pollutants (including co-contamination with heavy metals), plant species, root-associated niches (e.g., rhizosphere, rhizoplane and endosphere), geographical location and soil properties. Soil pollution can deplete some sensitive microbial taxa and enrich some tolerant microbial taxa in rhizosphere. Furthermore, rhizosphere enriches pollutant-degrading microbial community and functional genes including different gene clusters responsible for biodegradation of organic pollutants and their intermediates, which improve the adaptation of microbiome and enhance the remediation efficiency of the polluted soil. The knowledge gaps and future research challenges are highlighted on rhizosphere microbiome in response-adaptation-feedback processes to organic pollution and rhizoremediation. This review will hopefully update understanding on response-adaptation-feedback processes of rhizosphere microbiomes and rhizoremediation for the soil with organic pollutants.
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Affiliation(s)
- Huixiong Lü
- Guangdong Provincial Key Laboratory of Agricultural & Rural Pollution Abatement and Environmental Safety, College of Natural Resources and Environment, South China Agricultural University, Guangzhou 510642, China
| | - Guang-Xuan Tang
- Guangdong Provincial Research Center for Environment Pollution Control and Remediation Materials, College of Life Science and Technology, Jinan University, Guangzhou 510632, China
| | - Yu-Hong Huang
- Guangdong Provincial Research Center for Environment Pollution Control and Remediation Materials, College of Life Science and Technology, Jinan University, Guangzhou 510632, China
| | - Ce-Hui Mo
- Guangdong Provincial Research Center for Environment Pollution Control and Remediation Materials, College of Life Science and Technology, Jinan University, Guangzhou 510632, China
| | - Hai-Ming Zhao
- Guangdong Provincial Research Center for Environment Pollution Control and Remediation Materials, College of Life Science and Technology, Jinan University, Guangzhou 510632, China
| | - Lei Xiang
- Guangdong Provincial Research Center for Environment Pollution Control and Remediation Materials, College of Life Science and Technology, Jinan University, Guangzhou 510632, China
| | - Yan-Wen Li
- Guangdong Provincial Research Center for Environment Pollution Control and Remediation Materials, College of Life Science and Technology, Jinan University, Guangzhou 510632, China
| | - Hui Li
- Guangdong Provincial Research Center for Environment Pollution Control and Remediation Materials, College of Life Science and Technology, Jinan University, Guangzhou 510632, China
| | - Quan-Ying Cai
- Guangdong Provincial Research Center for Environment Pollution Control and Remediation Materials, College of Life Science and Technology, Jinan University, Guangzhou 510632, China.
| | - Qing X Li
- Department of Molecular Bioscience and Bioengineering, University of Hawaii at Manoa, Honolulu, HI 96822, USA
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6
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Jiang O, Li L, Duan G, Gustave W, Zhai W, Zou L, An X, Tang X, Xu J. Root exudates increased arsenic mobility and altered microbial community in paddy soils. J Environ Sci (China) 2023; 127:410-420. [PMID: 36522072 DOI: 10.1016/j.jes.2022.05.036] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2022] [Revised: 05/23/2022] [Accepted: 05/24/2022] [Indexed: 06/17/2023]
Abstract
Root exudates are crucial for plants returning organic matter to soils, which is assumed to be a major source of carbon for the soil microbial community. This study investigated the influence of root exudates on the fate of arsenic (As) with a lab simulation experiment. Our findings suggested that root exudates had a dose effect on the soil physicochemical properties, As speciation transformation and the microbial community structure at different concentrations. The addition of root exudates increased the soil pH while decreased the soil redox potential (Eh). These changes in the soil pH and Eh increased As and ferrous (Fe(II)) concentrations in soil porewater. Results showed that 40 mg/L exudates addition significantly increased arsenite (As(III)) and arsenate (As(V)) by 541 and 10 times respectively within 30 days in soil porewater. The relative abundance of Fe(III)-reducing bacteria Geobacter and Anaeromyxobacter increased with the addition of root exudates, which enhanced microbial Fe reduction. Together these results suggest that investigating how root exudates affect the mobility and transformation of As in paddy soils is helpful to systematically understand the biogeochemical cycle of As in soil-rice system, which is of great significance for reducing the health risk of soil As contamination.
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Affiliation(s)
- Ouyuan Jiang
- Institute of Soil and Water Resources and Environmental Science, Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China
| | - Lvyao Li
- Institute of Soil and Water Resources and Environmental Science, Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China
| | - Guilan Duan
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Williamson Gustave
- School of Chemistry, Environmental & Life Sciences, University of The Bahamas, New Providence, Nassau, Bahamas
| | - Weiwei Zhai
- Institute of Soil and Water Resources and Environmental Science, Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China
| | - Lina Zou
- Institute of Soil and Water Resources and Environmental Science, Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China; Zhejiang Xiaoshan Institute of Cotton & Bast Fiber Crops Research, Flower Research and Development Centre, Zhejiang Academy of Agricultural Sciences, Hangzhou 311202, China.
| | - Xia An
- Zhejiang Xiaoshan Institute of Cotton & Bast Fiber Crops Research, Flower Research and Development Centre, Zhejiang Academy of Agricultural Sciences, Hangzhou 311202, China
| | - Xianjin Tang
- Institute of Soil and Water Resources and Environmental Science, Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China
| | - Jianming Xu
- Institute of Soil and Water Resources and Environmental Science, Zhejiang Provincial Key Laboratory of Agricultural Resources and Environment, Zhejiang University, Hangzhou 310058, China
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Ali M, Song X, Wang Q, Zhang Z, Che J, Chen X, Tang Z, Liu X. Mechanisms of biostimulant-enhanced biodegradation of PAHs and BTEX mixed contaminants in soil by native microbial consortium. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 318:120831. [PMID: 36509345 DOI: 10.1016/j.envpol.2022.120831] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2022] [Revised: 11/29/2022] [Accepted: 12/04/2022] [Indexed: 06/17/2023]
Abstract
Despite the co-occurrence of polycyclic aromatic hydrocarbons (PAHs) and benzene, toluene, ethylbenzene, and xylene (BTEX) in the field, to date, knowledge on the bioremediation of benzene and benzo[a]pyrene (BaP) mixed contaminants is limited. In this study, the mechanisms underlying the biodegradation of benzene and BaP under individual and co-contaminated conditions followed by the enhanced biodegradation using methanol, ethanol, and vegetable oil as biostimulants were investigated. The results demonstrated that the benzene biodegradation was highly reduced under the co-contaminated condition compared to the individual benzene contamination, whereas the BaP biodegradation was slightly enhanced with the co-contamination of benzene. Moreover, biostimulation significantly improved the biodegradation of both contaminants under co-contaminated conditions. A trend of significant reduction in the bioavailable BaP contents was observed in all biostimulant-enhanced groups, implying that the bioavailable BaP was the preferred biodegradable BaP fraction. Furthermore, the enzymatic activity analysis revealed a significant increase in lipase and dehydrogenase (DHA) activities, as well as a reduction in the catalase and polyphenol oxidase, suggesting that the increased hydrolysis of fats and proton transfer, as well as the reduced oxidative stress, contributed to the enhanced benzene and BaP biodegradation in the vegetable oil treatment. In addition, the microbial composition analysis results demonstrated that the enriched functional genera contributed to the increased biodegradation efficiency, and the functional genera in the microbial consortium responded differently to different biostimulants, and competitive growth was observed in the biostimulant-enhanced treatments. In addition, the enrichment of Pseudomonas and Rhodococcus species was noticed during the biostimulation of benzene and BaP co-contamination soil, and was positively correlated with the DHA enzyme activities, indicating that these species encode DHA genes which contributed to the higher biodegradation. In conclusion, multiple lines of evidence were provided to shed light on the mechanisms of biostimulant-enhanced biodegradation of PAHs and BTEX co-contamination with native microbial consortiums.
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Affiliation(s)
- Mukhtiar Ali
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Xin Song
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of Chinese Academy of Sciences, Beijing, 100049, China.
| | - Qing Wang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
| | - Zhuanxia Zhang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Jilu Che
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
| | - Xing Chen
- China Construction 8th Engineering Division Corp., LTD, Shanghai, 200122, China
| | - Zhiwen Tang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Xin Liu
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
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Imam A, Suman SK, Singh P, Vempatapu BP, Tripathi D, Ray A, Kanaujia PK. Proteomic response of Pseudomonas aeruginosa IIPIS-8 during rapid and efficient degradation of naphthalene. ENVIRONMENTAL RESEARCH 2023; 216:114511. [PMID: 36265600 DOI: 10.1016/j.envres.2022.114511] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2022] [Revised: 09/05/2022] [Accepted: 10/02/2022] [Indexed: 06/16/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are widely distributed in the ecosystem and are of significant concern due to their toxicity and mutagenicity. Bioremediation of PAHs is a popular and benign approach that ameliorates the environment. This study investigated the biodegradation and proteome response of Pseudomonas aeruginosa IIPIS-8 for two-ringed PAH: naphthalene (NAP) to understand proteome alteration during its bioremediation. Rapid biodegradation was observed up to 98 ± 1.26% and 84 ± 1.03%, respectively, for initial concentrations of 100 mg L-1 and 500 mg L-1 of NAP. Degradation followed first-order kinetics with rate constants of 0.12 h-1 and 0.06 h-1 and half-life (t1/2) of 5.7 h and 11.3 h, respectively. Additionally, the occurrence of key ring cleavage and linear chain intermediates, 2,3,4,5,6, -pentamethyl acetophenone, 1-octanol 2-butyl, and hexadecanoic acid supported complete NAP degradation. Proteomics study of IIPIS-8 throws light on the impact of protein expression, in which 415 proteins were quantified in sequential windowed acquisition of all theoretical fragment ion mass spectra (SWATH-MS) analysis, of which 97 were found to be significantly up-regulated and 75 were significantly down-regulated by ≥ 2-fold change (p values ≤ 0.05), during the NAP degradation. The study also listed the up-regulation of several enzymes, including oxido-reductases, hydrolases, and catalases, potentially involved in NAP degradation. Overall, differential protein expression, through proteomics study, demonstrated IIPIS-8's capability to efficiently assimilate NAP in their metabolic pathways even in a high concentration of NAP.
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Affiliation(s)
- Arfin Imam
- Analytical Sciences Division, CSIR-Indian Institute of Petroleum, Haridwar Road, Dehradun, 248005, Uttarakhand, India; Material Resource Efficiency Division, CSIR-Indian Institute of Petroleum, Haridwar Road, Dehradun, 248005, Uttarakhand, India; Academy of Scientific and Innovative Research (AcSIR), CSIR-HRDC Campus, Ghaziabad, 201002, India
| | - Sunil Kumar Suman
- Material Resource Efficiency Division, CSIR-Indian Institute of Petroleum, Haridwar Road, Dehradun, 248005, Uttarakhand, India; Academy of Scientific and Innovative Research (AcSIR), CSIR-HRDC Campus, Ghaziabad, 201002, India.
| | - Praveen Singh
- CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi, 110025, India; Academy of Scientific and Innovative Research (AcSIR), CSIR-HRDC Campus, Ghaziabad, 201002, India
| | - Bhanu Prasad Vempatapu
- Analytical Sciences Division, CSIR-Indian Institute of Petroleum, Haridwar Road, Dehradun, 248005, Uttarakhand, India
| | - Deependra Tripathi
- Analytical Sciences Division, CSIR-Indian Institute of Petroleum, Haridwar Road, Dehradun, 248005, Uttarakhand, India
| | - Anjan Ray
- Analytical Sciences Division, CSIR-Indian Institute of Petroleum, Haridwar Road, Dehradun, 248005, Uttarakhand, India; Academy of Scientific and Innovative Research (AcSIR), CSIR-HRDC Campus, Ghaziabad, 201002, India
| | - Pankaj K Kanaujia
- Analytical Sciences Division, CSIR-Indian Institute of Petroleum, Haridwar Road, Dehradun, 248005, Uttarakhand, India; Academy of Scientific and Innovative Research (AcSIR), CSIR-HRDC Campus, Ghaziabad, 201002, India.
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9
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Li X, Kang X, Zou J, Yin J, Wang Y, Li A, Ma X. Allochthonous arbuscular mycorrhizal fungi promote Salix viminalis L.-mediated phytoremediation of polycyclic aromatic hydrocarbons characterized by increasing the release of organic acids and enzymes in soils. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2023; 249:114461. [PMID: 38321680 DOI: 10.1016/j.ecoenv.2022.114461] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2022] [Revised: 12/02/2022] [Accepted: 12/20/2022] [Indexed: 02/08/2024]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are well known persistent organic pollutants that have carcinogenic, teratogenic, and mutagenic effects on humans and animals. Arbuscular mycorrhizal fungi (AMF) that can infest plant hosts and form symbioses may help plants to enhance potential rhizosphere effects, thus contributing to the rhizodegradation of PAH-contaminated soils. The present study aimed to assess the effectiveness of AMF on enhancing Salix viminalis-mediated phytoremediation of PAH-polluted soil and clarify the plant enzymatic and organic acid mechanisms induced by AMF. Natural attenuation (NA), phytoremediation (P, Salix viminalis), S. viminalis-AMF combined remediation using willow inoculated with Funneliformis mosseae (PM), Laroideoglomus etunicatum (PE), and Rhizophagus intraradices (PI) were used as strategies for the remediation of PAH-polluted soils. The results showed that AMF inoculation contributed to the dissipation of the high-molecular-weight PAH benzo (α) pyrene that had concentrations in PM, PE, and PI treatments of 40.1 %, 24.49 %, and 36.28 % of the level in the NA treatment, and 62.32 %, 38.05 %, and 56.38 % of the level in the P treatment after 90 days. The mycorrhizal treatment also improved the removal efficiency of phenanthrene and pyrene, as their concentrations were sharply decreased after 30 days compared to the NA and P treatments. The research further clarified the changes in rhizosphere substances induced by AMF. Organic acids including arachidonic acid, octadecanedioic acid, α-linolenic acid, 10,12,14-octadecarachidonic acid and 5-methoxysalicylic acid that can act as co-metabolic substrates for certain microbial species to metabolize PAHs were significantly increased in AMF-inoculated treatments. AMF inoculation also elevated the levels of polyphenol oxidase, laccase, and dehydrogenase, that played crucial roles in PAHs biodegradation. These findings provide an effective strategy for using AMF-assisted S. viminalis to remediate PAH-polluted soils, and the results have confirmed the key roles of organic acids and soil enzymes in plant-AMF combined remediation of PAHs.
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Affiliation(s)
- Xia Li
- College of Agriculture and Bioengineering, Heze University, Heze 274000, Shandong, China
| | - Xiaofei Kang
- College of Agriculture and Bioengineering, Heze University, Heze 274000, Shandong, China
| | - Junzhu Zou
- Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China
| | - Jiahui Yin
- Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China; College of Horticulture, Jilin Agricultural University, Changchun 130000, Jilin, China
| | - Yuancheng Wang
- Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China
| | - Ao Li
- Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China
| | - Xiaodong Ma
- Institute of Grassland, Flowers and Landscape Ecology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100093, China.
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10
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Jiang Y, Shang Y, Zhang W, Zhang X, Li J, Shao S. Assessing the effect of SiO 2 and TiO 2 nanoparticles on granule stability and microbial community shift in aerobic granular sludge process. CHEMOSPHERE 2022; 307:135677. [PMID: 35843432 DOI: 10.1016/j.chemosphere.2022.135677] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2022] [Revised: 06/19/2022] [Accepted: 07/09/2022] [Indexed: 06/15/2023]
Abstract
The widely used SiO2 and TiO2 nanoparticles (NPs) can accumulate in industrial wastewaters, thereby posing challenge to biological wastewater treatment processes. In this work, the performance of aerobic granular sludge (AGS) reactors fed with wastewater containing 50 mg L-1 SiO2 and TiO2 NPs were investigated. The results showed that the granules could resist the NPs in wastewater (no disintegration of granules was observed). SiO2 NPs had a negative effect on the settleability of granules, with the SVI30 increased by 64.5% and protein secretion decreased by 29.9%. To the contrary, the settleability of granules was improved in the presence of TiO2 NPs due to the increase of the protein secretion. Possibly because of the compact and layered structure of granules, in the presence of both types of NPs, no obvious reduction of the overall removal efficiency of organics was found, and nanoparticle-resistant strains were enriched. The overall nitrification and denitrification efficiencies were hardly affected by SiO2 NPs while significantly inhibited by TiO2 NPs. Some functional genera, such as Hyphomicrobium and Acidovorax, showed growth inhibition with TiO2 NPs, which might be responsible for the reduction of nitrification and denitrification efficiencies.
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Affiliation(s)
- Yu Jiang
- School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan 430070, China
| | - Yu Shang
- School of Civil Engineering, Wuhan University, Wuhan 430072, China
| | - Wei Zhang
- School of Hydraulic and Environmental Engineering, Changsha University of Science & Technology, Changsha, 410114, China
| | - Xiangling Zhang
- School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan 430070, China
| | - Jiangyun Li
- School of Civil Engineering, Wuhan University, Wuhan 430072, China
| | - Senlin Shao
- School of Civil Engineering, Wuhan University, Wuhan 430072, China.
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11
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Zhou N, Guo H, Liu Q, Zhang Z, Sun J, Wang H. Bioaugmentation of polycyclic aromatic hydrocarbon (PAH)-contaminated soil with the nitrate-reducing bacterium PheN7 under anaerobic condition. JOURNAL OF HAZARDOUS MATERIALS 2022; 439:129643. [PMID: 35908400 DOI: 10.1016/j.jhazmat.2022.129643] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Revised: 07/10/2022] [Accepted: 07/18/2022] [Indexed: 06/15/2023]
Abstract
The remediation of polycyclic aromatic hydrocarbon (PAH)-contaminated soil under anaerobic condition is still a huge challenge. In this study, an anaerobic Bacillus firmus strain named PheN7 was firstly isolated from mixture of contaminated soil and sludge samples with phenanthrene as the sole carbon resource under nitrate reducing environment. The anaerobic strain was then inoculated combining with nitrate into the phenanthrene-spiked PAH-contaminated soil to investigate the remediation efficiency by anaerobic bioaugmentation (BA). Results showed that the synergy between PheN7 and indigenous degrading bacteria promoted the remediation efficiency of soil. The average removal efficiencies of phenanthrene in 56 days were 1.73 mg/kg soil·d in BA group, much higher than biostimulation group (sole nitrate addition) and natural degradation which achieved 1.48 mg/kg soil·d and 1.24 mg/kg soil·d of degradation rate, respectively. The outstanding adaptability of PheN7 made it become the dominant species in soil in the terminal period, but the invasion of PheN7 also resulted in the decline of diversity of the indigenous microbial community. Phylogenetic Investigation of Communities by Reconstruction of Unobserved States 2 (PICRUSt 2) results showed that a series of functional genes encoding anaerobic phenanthrene degradation and nitrate reductase enzymes in soil were remarkably strengthened with the addition of PheN7. This study confirmed the contribution of PheN7 as the anaerobic inoculum in PAH-contaminated soil remediation, further evaluating the practical applicability of anaerobic bioaugmentation technology in on-site remediation of real PAH-contaminated sites.
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Affiliation(s)
- Nan Zhou
- State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, PR China
| | - Haijiao Guo
- State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, PR China
| | - Qingxin Liu
- State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, PR China
| | - Zuotao Zhang
- State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, PR China
| | - Jiao Sun
- State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, PR China
| | - Hui Wang
- State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, PR China.
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12
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Hou J, Zhang Y, Wu X, Liu L, Wu Y, Liu W, Christie P. Zero-valent iron-induced successive chemical transformation and biodegradation of lindane in historically contaminated soil: An isotope-informed metagenomic study. JOURNAL OF HAZARDOUS MATERIALS 2022; 433:128802. [PMID: 35366451 DOI: 10.1016/j.jhazmat.2022.128802] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2022] [Revised: 03/23/2022] [Accepted: 03/24/2022] [Indexed: 06/14/2023]
Abstract
Zero-valent iron (ZVI) is widely used to mitigate environmental pollutants such as chlorinated pesticides through reductive reactions accompanied by extensive impacts on the soil microbial community. However, whether and how ZVI changes the biodegradation of target compounds remain poorly understood. Here, we monitor the fate of lindane using a 14C-labled tracer and evaluate the growth and functions of the bacterial community in ZVI-stressed conditions in a historically γ-hexachlorocyclohexane (lindane)-contaminated soil using a combination of isotopic (18O-H2O) and metagenomic methods. ZVI promoted the biomineralization of lindane in a dose-dependent manner. Soil bacteria were inhibited by amendment with ZVI during the initial stages of incubation (first three days) but recovered during the subsequent six weeks. Metagenomic study indicates that the todC1/bedC1 genes involved in the oxidation of dechlorinated lindane intermediates were upregulated in the 18O-labeled bacterial community but the presence of the lin genes responsible for lindane dechlorination was not confirmed. In addition, the benzoate biodegradation pathway that links to downstream catabolism of lindane was enhanced. These findings indicate successive chemical and biological degradation mechanisms underlying ZVI-enhanced lindane mineralization and provide a scientific basis for the inclusion of an extended bioremediation stage in the environmental application of ZVI materials.
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Affiliation(s)
- Jinyu Hou
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Yun Zhang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Xianghua Wu
- School of Food Science, Nanjing Xiaozhuang University, Nanjing 211171, China
| | - Linmeng Liu
- Shanghai Majorbio Bio-Pharm Technology Co., Ltd, Shanghai 201318, China
| | - Yucheng Wu
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China.
| | - Wuxing Liu
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Peter Christie
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
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13
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Benthic Microbial Communities in a Seasonally Ice-Covered Sub-Arctic River (Pasvik River, Norway) Are Shaped by Site-Specific Environmental Conditions. Microorganisms 2022; 10:microorganisms10051022. [PMID: 35630464 PMCID: PMC9147904 DOI: 10.3390/microorganisms10051022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Revised: 04/27/2022] [Accepted: 05/10/2022] [Indexed: 02/05/2023] Open
Abstract
The Pasvik River experiences chemical, physical, and biological stressors due to the direct discharges of domestic sewage from settlements located within the catchment and runoff from smelter and mine wastes. Sediments, as a natural repository of organic matter and associated contaminants, are of global concern for the possible release of pollutants in the water column, with detrimental effects on aquatic organisms. The present study was aimed at characterizing the riverine benthic microbial community and evaluating its ecological role in relation to the contamination level. Sediments were sampled along the river during two contrasting environmental periods (i.e., beginning and ongoing phases of ice melting). Microbial enzymatic activities, cell abundance, and morphological traits were evaluated, along with the phylogenetic community composition. Amplified 16S rRNA genes from bacteria were sequenced using a next-generation approach. Sediments were also analyzed for a variety of chemical features, namely particulate material characteristics and concentration of polychlorobiphenyls, polycyclic aromatic hydrocarbons, and pesticides. Riverine and brackish sites did not affect the microbial community in terms of main phylogenetic diversity (at phylum level), morphometry, enzymatic activities, and abundance. Instead, bacterial diversity in the river sediments appeared to be influenced by the micro-niche conditions, with differences in the relative abundance of selected taxa. In particular, our results highlighted the occurrence of bacterial taxa directly involved in the C, Fe, and N cycles, as well as in the degradation of organic pollutants and toxic compounds.
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14
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Wang A, Fu W, Feng Y, Liu Z, Song D. Synergetic effects of microbial-phytoremediation reshape microbial communities and improve degradation of petroleum contaminants. JOURNAL OF HAZARDOUS MATERIALS 2022; 429:128396. [PMID: 35236043 DOI: 10.1016/j.jhazmat.2022.128396] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2021] [Revised: 01/20/2022] [Accepted: 01/28/2022] [Indexed: 06/14/2023]
Abstract
Microbial-phytoremediation is an effective bioremediation technology that introduces petroleum-degrading bacteria and oil-tolerant plants into oil-contaminated soils in order to achieve effective degradation of total petroleum hydrocarbons (TPH). In this work, natural attenuation (NA), microbial remediation (MR, using Acinetobacter sp. Tust-DM21), phytoremediation (PR, using Suaeda glauca), and microbial-phytoremediation (MPR, using both species) were utilized to degrade petroleum hydrocarbons. We evaluated four different biological treatments, assessing TPH degradation rates, soil enzyme activities, and the structure of microbial community in the petroleum-contaminated soil. This finding revealed that the roots of Suaeda glauca adsorbed small amounts of polycyclic aromatic hydrocarbons, causing the structure of soil microbiota community to reshape. The abundance of petroleum-degrading bacteria and plant growth-promoting rhizobacteria (PGPR) has increased, as has microbial diversity. According to correlation research, these genera increased soil enzyme activity, boosted the number of degradation-functional genes in the petroleum hydrocarbon degradation pathway, and accelerated the dissipation and degradation of TPH in petroleum-contaminated soil. This evidence contributes to a better understanding of the mechanisms involved in the combined microbial-phytoremediation strategies for contaminated soil, specifically the interaction between microflora and plants in co-remediation and the effects on the structural reshaping of rhizosphere microbial communities.
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Affiliation(s)
- Ao Wang
- College of Marine and Environmental Sciences, Tianjin University of Science and Technology, Tianjin 300457, China
| | - Wenxian Fu
- College of Marine and Environmental Sciences, Tianjin University of Science and Technology, Tianjin 300457, China
| | - Yu Feng
- College of Marine and Environmental Sciences, Tianjin University of Science and Technology, Tianjin 300457, China
| | - Zhimin Liu
- College of Marine and Environmental Sciences, Tianjin University of Science and Technology, Tianjin 300457, China
| | - Donghui Song
- College of Marine and Environmental Sciences, Tianjin University of Science and Technology, Tianjin 300457, China; Key Laboratory of Marine Resource Chemistry and Food Technology (TUST), Ministry of Education, Tianjin 300457, China.
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15
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Yang ZN, Liu ZS, Wang KH, Liang ZL, Abdugheni R, Huang Y, Wang RH, Ma HL, Wang XK, Yang ML, Zhang BG, Li DF, Jiang CY, Corvini PFX, Liu SJ. Soil microbiomes divergently respond to heavy metals and polycyclic aromatic hydrocarbons in contaminated industrial sites. ENVIRONMENTAL SCIENCE AND ECOTECHNOLOGY 2022; 10:100169. [PMID: 36159729 PMCID: PMC9488039 DOI: 10.1016/j.ese.2022.100169] [Citation(s) in RCA: 27] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2021] [Revised: 03/14/2022] [Accepted: 03/14/2022] [Indexed: 05/19/2023]
Abstract
Contaminated sites from electronic waste (e-waste) dismantling and coking plants feature high concentrations of heavy metals (HMs) and/or polycyclic aromatic hydrocarbons (PAHs) in soil. Mixed contamination (HMs + PAHs) hinders land reclamation and affects the microbial diversity and function of soil microbiomes. In this study, we analyzed HM and PAH contamination from an e-waste dismantling plant and a coking plant and evaluated the influences of HM and PAH contamination on soil microbiomes. It was noticed that HMs and PAHs were found in all sites, although the major contaminants of the e-waste dismantling plant site were HMs (such as Cu at 5,947.58 ± 433.44 mg kg-1, Zn at 4,961.38 ± 436.51 mg kg-1, and Mn at 2,379.07 ± 227.46 mg kg-1), and the major contaminants of the coking plant site were PAHs (such as fluorene at 11,740.06 ± 620.1 mg kg-1, acenaphthylene at 211.69 ± 7.04 mg kg-1, and pyrene at 183.14 ± 18.89 mg kg-1). The microbiomes (diversity and abundance) of all sites were determined via high-throughput sequencing of 16S rRNA genes, and redundancy analysis was conducted to investigate the relations between soil microbiomes and contaminants. The results showed that the microbiomes of the contaminated sites divergently responded to HMs and PAHs. The abundances of the bacterial genera Sulfuritalea, Pseudomonas, and Sphingobium were positively related to PAHs, while the abundances of the bacterial genera Bryobacter, Nitrospira, and Steroidobacter were positively related to HMs. This study promotes an understanding of how soil microbiomes respond to single and mixed contamination with HMs and PAHs.
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Affiliation(s)
- Zhen-Ni Yang
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
| | - Ze-Shen Liu
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
| | - Ke-Huan Wang
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Zong-Lin Liang
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Rashidin Abdugheni
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Ye Huang
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Run-Hua Wang
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Hong-Lin Ma
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Xiao-Kang Wang
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Mei-Ling Yang
- School of Life Sciences, Hebei University, Baoding, 071002, Hebei Province, China
| | - Bing-Ge Zhang
- School of Public Health, Xuzhou Medical University, Xuzhou, 221004, Jiangsu Province, China
| | - De-Feng Li
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
| | - Cheng-Ying Jiang
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
- Corresponding author.
| | - Philippe F.-X. Corvini
- School of Life Sciences, University of Applied Sciences and Arts Northwestern Switzerland, Muttenz, 4132, Switzerland
| | - Shuang-Jiang Liu
- State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
- State Key Laboratory of Microbial Technology, Microbial Technology Institute, Shandong University, Qingdao, 226237, Shandong Province, China
- Corresponding author. State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China
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16
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Li Y, Ma J, Li Y, Xiao C, Shen X, Chen J, Xia X. Nitrogen addition facilitates phytoremediation of PAH-Cd cocontaminated dumpsite soil by altering alfalfa growth and rhizosphere communities. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 806:150610. [PMID: 34597578 DOI: 10.1016/j.scitotenv.2021.150610] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2021] [Revised: 09/22/2021] [Accepted: 09/22/2021] [Indexed: 06/13/2023]
Abstract
Thousands of unlined landfills and open dumpsites seriously threatened the safety of soil and groundwater due to leachate leakage with a mass of pollutants, particularly heavy metals, organic contaminants and ammonia. Phytoremediation is widely used in the treatment of cocontaminated soils because it is cost-effective and environmentally friendly. However, the extent to which phytoremediation efficiency and plant physiological responses are affected by the high nitrogen (N) content in such cocontaminated soil is still uncertain. Here, pot experiments were conducted to investigate the effects of N addition on the applicability of legume alfalfa remediation for polycyclic aromatic hydrocarbon‑cadmium (PAHCd) co-/contaminated soil and the corresponding microbial regulation mechanism. The results showed that the PAH dissipation rates and Cd removal rates in the high-contamination groups increased with the external N supply, among which the pyrene dissipation rates in the cocontaminated soil was elevated most significantly, from 78.10% to 87.25%. However, the phytoremediation efficiency weakened in low cocontaminated soil, possibly because the excessive N content had inhibitory effects on the rhizobium Ensifer and restrained alfalfa growth. Furthermore, the relative abundance of PAH-degrading bacteria in the rhizosphere dominated PAH dissipation. As reflected by principal coordinate analysis (PCoA) analysis and hierarchical dendrograms, the microbial community composition changed with N addition, and a more pronounced shift was found in the rhizosphere relative to the endosphere or shoots of alfalfa. This study will provide a theoretical basis for legume plant remediation of dumpsites as well as soil contaminated with multiple pollutants.
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Affiliation(s)
- Yijia Li
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, No. 19, Xinjiekouwai Street, HaiDian District, Beijing 100875, PR China.
| | - Junwei Ma
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, No. 19, Xinjiekouwai Street, HaiDian District, Beijing 100875, PR China.
| | - Yuqian Li
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, No. 19, Xinjiekouwai Street, HaiDian District, Beijing 100875, PR China.
| | - Chen Xiao
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, No. 19, Xinjiekouwai Street, HaiDian District, Beijing 100875, PR China.
| | - Xinyi Shen
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, No. 19, Xinjiekouwai Street, HaiDian District, Beijing 100875, PR China.
| | - Jiajun Chen
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, No. 19, Xinjiekouwai Street, HaiDian District, Beijing 100875, PR China.
| | - Xinghui Xia
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, No. 19, Xinjiekouwai Street, HaiDian District, Beijing 100875, PR China.
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Vieira CK, Dos Anjos Borges LG, Bortolini JG, Soares CRFS, Giongo A, Stürmer SL. Does a decrease in microbial biomass alter mycorrhizal attributes and soil quality indicators in coal mining areas under revegetation process? THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 802:149843. [PMID: 34455279 DOI: 10.1016/j.scitotenv.2021.149843] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2021] [Revised: 08/17/2021] [Accepted: 08/18/2021] [Indexed: 06/13/2023]
Abstract
Losses of microbial diversity in degraded ecosystems still have obscure consequences, especially when considering the interaction between arbuscular mycorrhizal fungi (AMF) and soil bacteria. This study investigates the effect of decreasing microbial biomass on mycorrhizal attributes and soil quality indicators. The dilution-to-extinction approach was applied in microcosms to search for associations among bacterial diversity, mycorrhizal attributes, and soil quality indicators. The experiment was conducted with four soil treatments (undiluted control 100 = D0, 10-3 = D3, 10-6 = D6, and 10-9 = D9) from a short-term (two years = 2Y) and a long-term (15 years = 15Y) coal mine revegetation area. Microcosms were inoculated with 300 spores of Acaulospora colombiana, Gigaspora albida, and Claroideoglomus etunicatum with millet as the host plant. Results included the total number of AMF spores, mycorrhizal colonization, soil aggregation, glomalin, fluorescein diacetate hydrolysis (FDA), basal soil respiration, microbial biomass, and soil bacterial microbiome. Larger differences were observed between areas than between dilution treatments within the sampling area. Attributes that presented differences in the dilutions compared to D0 2Y samples were mycorrhizal colonization (D0 = 85% and D9 = 43.3%), FDA (D0 = 77.2% and D9 = 55.5%), extractable glomalin-related soil protein (D0 = 0.09 and D9 = 0.11) and bacterial diversity (D0 = 7.3 and D6 = 5.3). D0 15Y samples presented differences in microbial biomass nitrogen (D0: 232.0) and bacterial diversity (D0: 7.9, D9: 5.6) compared to the dilutions. Bacterial microbiome present in the D0 samples formed distinct clusters as to other samples and correlated with soil aggregation and basal respiration attributes. Results suggest that AMF inoculation and dilution-to-extinction did not affect soil quality indicators preeminently, but the bacterial community is affected and can influence the process of environmental revegetation. A long-term revegetation period is substantial to improve quality indicators and establish the diversity of microorganisms and consequently revegetation in areas impacted by coal mining.
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Affiliation(s)
- Caroline Krug Vieira
- Universidade Regional de Blumenau (FURB), Programa de Pós-Graduação em Engenharia Ambiental, 89030-903 Blumenau, SC, Brazil
| | - Luiz Gustavo Dos Anjos Borges
- Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS), Instituto do Petróleo e dos Recursos Naturais (IPR), 90619-900 Porto Alegre, RS, Brazil
| | | | | | - Adriana Giongo
- Universidade Regional de Blumenau (FURB), Programa de Pós-Graduação em Engenharia Ambiental, 89030-903 Blumenau, SC, Brazil; Julius Kühn Institute (JKI) - Federal Research Centre for Cultivated Plants, Institute for Epidemiology and Pathogen Diagnostics, Messeweg 11-12, 38104 Braunschweig, Germany
| | - Sidney Luiz Stürmer
- Universidade Regional de Blumenau (FURB), Departamento de Ciências Naturais (DCN), 89030-903 Blumenau, SC, Brazil.
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18
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Wang L, Liu Z, Jiang X, Li A. Aerobic granulation of nitrifying activated sludge enhanced removal of 17α-ethinylestradiol. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 801:149546. [PMID: 34438142 DOI: 10.1016/j.scitotenv.2021.149546] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Revised: 07/25/2021] [Accepted: 08/05/2021] [Indexed: 06/13/2023]
Abstract
The positive correlation between the nitrification activity of activated sludge and 17α-ethinylestradiol (EE2) removal has been widely reported. However, up to now the effect of the granulation of nitrifying activated sludge (NAS) on EE2 removal has not been determined. In this study, nitrifying granular sludge (NGS) exhibited more effective EE2 removal efficiency with 3.705 μgEE2∙(gMLSS∙h)-1 in a sequential batch reactor (SBR). Through the artificial neural network (ANN) model and Spearman correlation analysis, nitrite accumulation was demonstrated to be the key factor affecting EE2 removal. Notably, under the same aeration condition (0.15 L/min), nitrite accumulation was more easily achieved in NGS because of its dense structure. Full-length 16S rRNA gene sequencing suggested that EE2 could strongly influence the microbial communities of NAS and NGS. NGS exhibited an increase in community diversity and richness, but NAS exhibited a decrease. In addition, the relative abundance of Nitrosomonas (ammonia-oxidizing bacteria, AOB) decreased considerably in both NAS and NGS, whereas the expression of amoA and nirK genes in Nitrosomonas was upregulated. It was suggested that Nitrosomonas was forced to regulate its gene expression to resist the negative effects of EE2. Denitrifying bacteria, such as Comamonas, were enriched in both NAS and NGS, and there were more species of heterotrophs that can degrade micropollutants in NGS with exposure to EE2. The transformation pathways of EE2 were uniform in NAS and NGS. Ammonia monooxygenase (AMO) in AOB directly biotransformed EE2 while reactive species produced by AOB chemically transformed EE2. Heterotrophs degraded EE2 and its transformation products (TPs) generated by AOB. According to TPs and microbial structure, NGS exhibited better performance than NAS regarding the collaborative removal of EE2 by AOB and heterotrophs. These results provide important information for the development and application of NGS to treat wastewater containing estrogen and high-strength ammonium.
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Affiliation(s)
- Lili Wang
- Key Laboratory of Water and sediment Sciences of Ministry of Education, State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, Beijing 100875, China
| | - Zhifang Liu
- Key Laboratory of Water and sediment Sciences of Ministry of Education, State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, Beijing 100875, China
| | - Xiaoman Jiang
- Key Laboratory of Water and sediment Sciences of Ministry of Education, State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, Beijing 100875, China
| | - Anjie Li
- Key Laboratory of Water and sediment Sciences of Ministry of Education, State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, Beijing 100875, China.
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Hou J, Wang Q, Liu W, Zhong D, Ge Y, Christie P, Luo Y. Soil microbial community and association network shift induced by several tall fescue cultivars during the phytoremediation of a petroleum hydrocarbon-contaminated soil. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 792:148411. [PMID: 34465037 DOI: 10.1016/j.scitotenv.2021.148411] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/18/2021] [Revised: 06/05/2021] [Accepted: 06/08/2021] [Indexed: 06/13/2023]
Abstract
Biodegradation of soil contaminants may be promoted near plant roots due to the "rhizosphere effect" which may enhance microbial growth and activity. However, the effects of different plant cultivars within a single species on degradation remains unclear. Here, we evaluated the removal of soil total petroleum hydrocarbons (TPHs) by ten different cultivars of tall fescue grass (Festuca arundinacea L.) and their associated rhizosphere microbiomes. TPH removal efficiency across the ten different cultivars was not significantly correlated with plant biomass. Rhizing Star and Greenbrooks cultivars showed the maximum (76.6%) and minimum (62.2%) TPH removal efficiencies, respectively, after 120 days. Significant differences were observed between these two cultivars in the composition of rhizosphere bacterial and fungal communities, especially during the early stages (day 30) of remediation but the differences decreased later (day 90). Putative petroleum-degrading bacterial and fungal guilds were enriched in the presence of tall fescue. Moreover, the complexity of microbial networks declined in treatments with higher TPH removal efficiency. The relative abundances of saprotrophic fungi and putative genes alkB and C12O in bacetria involved in petroleum degradation increased, especially in the presence of Rhizing Star cultivar, and this was consistent with the TPH removal efficiency results. These results indicate the potential of tall fescue grass cultivars and their associated rhizosphere microbiomes to phytoremediate petroleum hydrocarbon-contaminated soils.
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Affiliation(s)
- Jinyu Hou
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Qingling Wang
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Wuxing Liu
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China.
| | - Daoxu Zhong
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; Jiangsu Provincial Academy of Environmental Science, Nanjing, Jiangsu 210036, China
| | - Yanyan Ge
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Peter Christie
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
| | - Yongming Luo
- Key Laboratory of Soil Environment and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China
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20
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Wang J, Bao H, Pan G, Zhang H, Li J, Li J, Cai J, Wu F. Combined application of rhamnolipid and agricultural wastes enhances PAHs degradation via increasing their bioavailability and changing microbial community in contaminated soil. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2021; 294:112998. [PMID: 34126539 DOI: 10.1016/j.jenvman.2021.112998] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2021] [Revised: 05/17/2021] [Accepted: 06/02/2021] [Indexed: 06/12/2023]
Abstract
Either biosurfactants or agricultural wastes were frequently used to enhance degradation of PAHs in soil, but there is still not clear whether combined application of biosurfactants and agricultural wastes is more efficient. Rhamnolipid and/or agricultural wastes (mushroom substrate or maize straw) were mixed with PAHs-contaminated soil to explore their performances in the removal of PAHs. The present study showed that rhamnolipid combined with mushroom substrate (MR, 30.36%) or maize straw (YR, 30.76%) significantly enhanced the degradation of soil PAHs compared with single application of mushroom substrate (M, 25.53%) or maize straw (Y, 25.77%) or no addition (19.38%). The addition of agricultural wastes significantly (p < 0.001) enhanced concentration of dissolved organic carbon (DOC) in soil. The combined application obviously improved the bioavailability of PAHs in soils and exhibited synergistic effects on concentration of organic acid-soluble HMW PAHs and the degradation rate of total HMW PAHs. Meanwhile, the combined application significantly (p < 0.01) enhanced the abundance of dominant bacterial and fungal genera being connected with PAHs degradation. The removal rate of PAHs was positively correlated with the dominant genera of bacteria (r = 0.539-0.886, p < 0.05) and fungi (r = 0.526-0.867, p < 0.05) related to PAHs degradation. Overall, the combined application exhibited a better performance in the removal of PAHs in contaminated soil via increasing their bioavailability and changing microbial communities in soil.
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Affiliation(s)
- Jinfeng Wang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China
| | - Huanyu Bao
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology (SKLUWRE, HIT), Harbin, 150090, PR China
| | - Guodong Pan
- Jining Ecological Environment Monitoring Center of Shandong Province, Jining, 272100, PR China
| | - He Zhang
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China
| | - Jia Li
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China
| | - Jiao Li
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China
| | - Jun Cai
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China
| | - Fuyong Wu
- College of Natural Resources and Environment, Northwest A&F University, Yangling, 712100, Shaanxi, PR China; Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, Yangling, 712100, Shaanxi, PR China.
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21
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Chi Z, Hou L, Li H, Wu H, Yan B. Indigenous bacterial community and function in phenanthrene-polluted coastal wetlands: Potential for phenanthrene degradation and relation with soil properties. ENVIRONMENTAL RESEARCH 2021; 199:111357. [PMID: 34022228 DOI: 10.1016/j.envres.2021.111357] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Revised: 05/16/2021] [Accepted: 05/17/2021] [Indexed: 06/12/2023]
Abstract
The Yellow River Delta, adjacent to Shengli Oilfield, has a potential risk of petroleum pollution. In this study, soil samples were collected from phenanthrene (PHE)-polluted (adjacent to abandoned oil well, Zone D) and non-polluted (far away from abandoned oil well, Zone E) coastal wetlands. The influence of PHE pollution on indigenous bacterial community and function, and their relationship with soil characteristics were investigated. The levels of PHE, salinity and NH4+-N were higher in Zone D than in Zone E. PHE-degrading bacteria Achromobacter and Acinetobacter were mainly distributed in Zone E, whereas Halomonas, Marinobacter, and Roseovarius were highly abundant in Zone D. Halomonas and Marinobacter had the potential for denitrification and could achieve PHE degradation through mutual cooperation. PHE pollution could increase the abundance of functional bacteria but reduce the diversity of microbial community. PHE and salinity played key roles in shaping microbial community structure and function. High PHE level inhibited microbial metabolism but stimulated self-protection potential. PHE aerobic degradation associated with the catechol and phthalic acid pathways was found in Zone D, whereas the catechol pathway dominated in Zone E. Interestingly, PHE anaerobic degradation with nitrate reduction also dominated in Zone D, whereas the process coupled with multiple electron acceptors co-existed in Zone E, which was associated with tidal seawater carrying nutrients. This study illustrated the importance of comprehensive consideration of microbial community structure and function under PHE pollution, suggesting indigenous microorganisms as potential microbial consortium for bioremediation in coastal wetlands.
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Affiliation(s)
- Zifang Chi
- Key Lab of Groundwater Resources and Environment, Ministry of Education, Jilin University, Changchun, 130021, PR China
| | - Lining Hou
- Key Lab of Groundwater Resources and Environment, Ministry of Education, Jilin University, Changchun, 130021, PR China
| | - Huai Li
- Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, PR China.
| | - Haitao Wu
- Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, PR China
| | - Baixing Yan
- Key Laboratory of Wetland Ecology and Environment, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, PR China
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22
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Premnath N, Mohanrasu K, Guru Raj Rao R, Dinesh GH, Siva Prakash G, Pugazhendhi A, Jeyakanthan J, Govarthanan M, Kumar P, Arun A. Effect of C/N substrates for enhanced extracellular polymeric substances (EPS) production and Poly Cyclic Aromatic Hydrocarbons (PAHs) degradation. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 275:116035. [PMID: 33581631 DOI: 10.1016/j.envpol.2020.116035] [Citation(s) in RCA: 44] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Revised: 09/18/2020] [Accepted: 09/20/2020] [Indexed: 05/22/2023]
Abstract
Extracellular Polymeric Substances (EPS) influenced Poly Cyclic Aromatic Hydrocarbons (PAHs) degrading Klebsiella pneumoniae was isolated from the marine environment. To increase the EPS production by Klebsiella pneumoniae, several physicochemical parameters were tweaked such as different carbon sources (arabinose, glucose, glycerol, lactose, lactic acid, mannitol, sodium acetate, starch, and sucrose at 20 g/L), nitrogen sources (ammonium chloride, ammonium sulphate, glycine, potassium nitrate, protease peptone and urea at 2 g/L), different pH, carbon/nitrogen ratio, temperature, and salt concentration were examined. Maximum EPS growth and biodegradation of Anthracene (74.31%), Acenaphthene (67.28%), Fluorene (62.48%), Naphthalene (57.84%), and mixed PAHs (55.85%) were obtained using optimized conditions such as glucose (10 g/L) as carbon source, potassium nitrate (2 g/L) as the nitrogen source at pH 8, growth temperature of 37 °C, 3% NaCl concentration and 72 h incubation period. The Klebsiella pneumoniae biofilm architecture was studied by confocal laser scanning microscopy (CLSM) and scanning electron microscope (SEM). The present study demonstrates the EPS influenced PAHs degradation of Klebsiella pneumoniae.
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Affiliation(s)
- N Premnath
- Department of Energy Science, Alagappa University, Karaikudi, Tamil Nadu, India; Department of Microbiology, Alagappa University, Karaikudi, Tamil Nadu, India
| | - K Mohanrasu
- Department of Energy Science, Alagappa University, Karaikudi, Tamil Nadu, India; Department of Microbiology, Alagappa University, Karaikudi, Tamil Nadu, India
| | - R Guru Raj Rao
- Department of Bioinformatics, Alagappa University, Karaikudi, Tamil Nadu, India
| | - G H Dinesh
- Department of Energy Science, Alagappa University, Karaikudi, Tamil Nadu, India; Department of Microbiology, Alagappa University, Karaikudi, Tamil Nadu, India
| | - G Siva Prakash
- Department of Energy Science, Alagappa University, Karaikudi, Tamil Nadu, India
| | - Arivalagan Pugazhendhi
- Innovative Green Product Synthesis and Renewable Environment Development Research Group, Faculty of Environment and Labour Safety, Ton Duc Thang University, Ho, Chi Minh City, Viet Nam.
| | - J Jeyakanthan
- Department of Bioinformatics, Alagappa University, Karaikudi, Tamil Nadu, India
| | - Muthusamy Govarthanan
- Department of Environmental Engineering, Kyungpook National University, Daegu, 41566, Republic of Korea
| | - Ponnuchamy Kumar
- Department of Animal Health and Management, Alagappa University, Karaikudi, Tamil Nadu, India
| | - A Arun
- Department of Microbiology, Alagappa University, Karaikudi, Tamil Nadu, India.
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23
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Garousin H, Pourbabaee AA, Alikhani HA, Yazdanfar N. A Combinational Strategy Mitigated Old-Aged Petroleum Contaminants: Ineffectiveness of Biostimulation as a Bioremediation Technique. Front Microbiol 2021; 12:642215. [PMID: 33717040 PMCID: PMC7947215 DOI: 10.3389/fmicb.2021.642215] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Accepted: 02/08/2021] [Indexed: 11/13/2022] Open
Abstract
Hydrocarbon contamination emerging from the crude oil industrial-related activities has led to severe environmental issues. Prolonged contamination with the constant infiltration of crude oil into the soil is a severe problem in remediating contaminated soils. Hence, the current study focuses on comparing various bioremediation strategies, thereby isolating native bacteria competent to reduce TPH in both liquid and microcosm environments in an old-aged petroleum hydrocarbon contaminated soil. Assays in the modified 6SW-Vit medium after 7 days of incubation revealed that Bacillus altitudinis strain HRG-1 was highly hydrophobic and had a suitable ability to decrease surface tension (40.98%) and TPH (73.3%). The results of biodegradation in the microcosm proved that among the designated treatments, including bio-stimulated microcosm (SM), bacterialized microcosm (BM), a combined bio-stimulated microcosm and bacterialized microcosm (SB), and natural attenuation (NA), the SB treatment was the most effective in mitigating TPH (38.2%). However, the SM treatment indicated the lowest TPH biodegradation (18%). Pearson correlation coefficient among microcosm biological indicators under investigation revealed that soil basal respiration had the highest correlation with the amount of residual TPH (r = −0.73915, P < 0.0001), followed by the microbial population (r = −0.65218, P < 0.0001), catalase activity (r = 0.48323, P = 0.0028), polyphenol oxidase activity (r = −0.43842, P = 0.0075), and dehydrogenase activity (r = −0.34990, P = 0.0364), respectively. Nevertheless, considering the capability of strain HRG-1 and the higher efficiency of the combined technique, their use is recommended to diminish the concentration of petroleum hydrocarbons in hot and dry contaminated areas.
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Affiliation(s)
- Hamidreza Garousin
- Biology and Biotechnology Lab, Department of Soil Science, University College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran
| | - Ahmad Ali Pourbabaee
- Biology and Biotechnology Lab, Department of Soil Science, University College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran
| | - Hossein Ali Alikhani
- Biology and Biotechnology Lab, Department of Soil Science, University College of Agriculture and Natural Resources, University of Tehran, Karaj, Iran
| | - Najmeh Yazdanfar
- Iranian Institute of R&D in Chemical Industries (IRDCI) (ACECR), Tehran, Iran
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24
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Mei F, Meng K, Gu Z, Yun Y, Zhang W, Zhang C, Zhong Q, Pan F, Shen X, Xia G, Chen H. Arecanut ( Areca catechu L.) Seed Polyphenol-Ameliorated Osteoporosis by Altering Gut Microbiome via LYZ and the Immune System in Estrogen-Deficient Rats. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2021; 69:246-258. [PMID: 33382620 DOI: 10.1021/acs.jafc.0c06671] [Citation(s) in RCA: 31] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Polyphenol can improve osteoporosis and is closely associated with gut microbiota, while the mechanism and the relationship among polyphenol, osteoporosis, and gut microbiota colonization remain unclear. Here, an osteoporosis rat model established by ovariectomy was employed to investigate the improving mechanism of arecanut (Areca catechu L.) seed polyphenol (ACP) on osteoporosis by regulating gut microbiota. We analyzed the bone microstructure, Paneth cells, regulating microbial protein (lysozyme (LYZ)), proinflammatory cytokines, macrophage infiltration levels, and gut microbial communities in a rat. ACP improved the trabecular microstructure compared to OVX, including the increased trabecular number (Tb.N) (P < 0.01) and trabecular thickness (Tb.Th) (P < 0.001) and decreased trabecular separation (Tb.Sp) (P < 0.01). At the phylum level, Bacteroidetes was increased after ovariectomy (P < 0.001) and Firmicutes and Proteobacteria were increased in ACP (P < 0.001). Antiosteoporosis groups with lower LYZ and Paneth cells (P < 0.001) showed that the microbiota Alistipes, which have a negative effect on bone metabolism were decreased in ACP (P < 0.001). Altogether, these studies showed that the estrogen deficiency could induce the shedding of Paneth cells, which leads to the decrease of LYZ, while ACP could increase the LYZ expression by maintaining the population of Paneth cells in an estrogen-deficient host, which were implicated in gut microbiota regulation and improved osteoporosis by controlling the inflammatory reaction.
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Affiliation(s)
- Fengfeng Mei
- Hainan Engineering Research Center of Aquatic Resources Efficient Utilization in South China Sea, Hainan University, Haikou, Hainan 570228, China
- College of Food Science and Technology, Hainan University, Haikou, Hainan 570228, China
| | - Keke Meng
- Hainan Engineering Research Center of Aquatic Resources Efficient Utilization in South China Sea, Hainan University, Haikou, Hainan 570228, China
- College of Food Science and Technology, Hainan University, Haikou, Hainan 570228, China
| | - Zhipeng Gu
- Hainan Engineering Research Center of Aquatic Resources Efficient Utilization in South China Sea, Hainan University, Haikou, Hainan 570228, China
- College of Food Science and Technology, Hainan University, Haikou, Hainan 570228, China
| | - Yonghuan Yun
- Key Laboratory of Food Nutrition and Functional Food of Hainan Province, Haikou 570228, China
- Engineering Research Center of Utilization of Tropical Polysaccharide Resources, Ministry of Education, Haikou 570228, China
| | - Weimin Zhang
- Key Laboratory of Food Nutrition and Functional Food of Hainan Province, Haikou 570228, China
- Engineering Research Center of Utilization of Tropical Polysaccharide Resources, Ministry of Education, Haikou 570228, China
| | - Chenghui Zhang
- Key Laboratory of Food Nutrition and Functional Food of Hainan Province, Haikou 570228, China
- Engineering Research Center of Utilization of Tropical Polysaccharide Resources, Ministry of Education, Haikou 570228, China
| | - Qiuping Zhong
- Key Laboratory of Food Nutrition and Functional Food of Hainan Province, Haikou 570228, China
- Engineering Research Center of Utilization of Tropical Polysaccharide Resources, Ministry of Education, Haikou 570228, China
| | - Feibing Pan
- Huachuang Institute of Areca Research-Hainan, Haikou, Hainan 570228, China
| | - Xuanri Shen
- Hainan Engineering Research Center of Aquatic Resources Efficient Utilization in South China Sea, Hainan University, Haikou, Hainan 570228, China
- Key Laboratory of Food Nutrition and Functional Food of Hainan Province, Haikou 570228, China
- Engineering Research Center of Utilization of Tropical Polysaccharide Resources, Ministry of Education, Haikou 570228, China
- College of Food Science and Technology, Hainan University, Haikou, Hainan 570228, China
| | - Guanghua Xia
- Hainan Engineering Research Center of Aquatic Resources Efficient Utilization in South China Sea, Hainan University, Haikou, Hainan 570228, China
- Key Laboratory of Food Nutrition and Functional Food of Hainan Province, Haikou 570228, China
- Engineering Research Center of Utilization of Tropical Polysaccharide Resources, Ministry of Education, Haikou 570228, China
- College of Food Science and Technology, Hainan University, Haikou, Hainan 570228, China
- Huachuang Institute of Areca Research-Hainan, Haikou, Hainan 570228, China
| | - Haiming Chen
- Hainan Engineering Research Center of Aquatic Resources Efficient Utilization in South China Sea, Hainan University, Haikou, Hainan 570228, China
- Key Laboratory of Food Nutrition and Functional Food of Hainan Province, Haikou 570228, China
- Engineering Research Center of Utilization of Tropical Polysaccharide Resources, Ministry of Education, Haikou 570228, China
- College of Food Science and Technology, Hainan University, Haikou, Hainan 570228, China
- Huachuang Institute of Areca Research-Hainan, Haikou, Hainan 570228, China
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25
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Cavalcanti JVFL, Fraga TJM, Loureiro Leite MDA, Dos Santos E Silva DF, de Lima VF, Schuler ARP, do Nascimento CWA, da Motta Sobrinho MA. In-depth investigation of Sodium percarbonate as oxidant of PAHs from soil contaminated with diesel oil. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 268:115832. [PMID: 33120152 DOI: 10.1016/j.envpol.2020.115832] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2020] [Revised: 09/04/2020] [Accepted: 10/11/2020] [Indexed: 06/11/2023]
Abstract
Sodium percarbonate (SPC, 2Na2CO3∙3H2O2), is a compound that can be used under multiple environmental applications. In this work, SPC was employed as oxidant in the treatment of soil contaminated with diesel oil. The soil samples were collected during the earthmoving stage of RNEST Oil Refinery (Petrobras), Brazil. Then, the samples were air-dried, mixed and characterized. Subsequently, raw soil was contaminated with diesel and treated by photo-Fenton reaction (H2O2/Fe2+/UV). SPC played a significant role in the generation of hydroxyl radicals under the catalytic effect of ferrous ions (Fe2+), hydrogen peroxide (H2O2) and radiation. These radicals provoked the photodegradation of polycyclic aromatic hydrocarbons (PAHs), in the soil remediation. A factorial design 33 was carried out to assess the variables which most influenced the decrease in total organic carbon (TOC). The study was performed with the following variables: initial concentration of [H2O2] and [Fe2+], between 190.0 and 950.0 mmol L-1 and 0.0-14.4 mmol L-1, respectively. UV radiation was supplied from sunlight, blacklight lamps, and system without radiation. All experiments were performed with 5.0 g of contaminated soil in 50.0 mL of solution. The initial concentration of Fe2+ showed the statistically most significant effect. The oxidation efficiency evaluated in the best condition showed a decrease from 34,765 mg kg-1 to 15,801 mg kg-1 in TOC and from 85.750 mg kg-1 to 20.770 mg kg-1 in PAHs content. Moreover, the sums of low and high molecular weight polycyclic aromatic hydrocarbons (LMW-PAHs and HMW-PAHs) were 19.537 mg kg-1 and 1.233 mg kg-1, respectively. Both values are within the limits recommended by the United Sates Environmental Protection Agency (USEPA) and evidenced the satisfactory removal of PAHs from contaminated soil, being an alternative to classic oxidation protocols.
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Affiliation(s)
| | - Tiago José Marques Fraga
- Department of Chemical Engineering, Federal University of Pernambuco, 1235 Prof. Moraes Rego Avenue, Cidade Universitária, ZIP code, 50670-901, Recife, Brazil.
| | - Mirella de Andrade Loureiro Leite
- Department of Chemical Engineering, Federal University of Pernambuco, 1235 Prof. Moraes Rego Avenue, Cidade Universitária, ZIP code, 50670-901, Recife, Brazil
| | - Daniella Fartes Dos Santos E Silva
- Department of Chemical Engineering, Federal University of Pernambuco, 1235 Prof. Moraes Rego Avenue, Cidade Universitária, ZIP code, 50670-901, Recife, Brazil
| | - Valmir Félix de Lima
- Department of Chemical Engineering, Federal University of Pernambuco, 1235 Prof. Moraes Rego Avenue, Cidade Universitária, ZIP code, 50670-901, Recife, Brazil
| | - Alexandre Ricardo Pereira Schuler
- Department of Chemical Engineering, Federal University of Pernambuco, 1235 Prof. Moraes Rego Avenue, Cidade Universitária, ZIP code, 50670-901, Recife, Brazil
| | | | - Maurício Alves da Motta Sobrinho
- Department of Chemical Engineering, Federal University of Pernambuco, 1235 Prof. Moraes Rego Avenue, Cidade Universitária, ZIP code, 50670-901, Recife, Brazil.
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