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Bernau CR, Knödler M, Emonts J, Jäpel RC, Buyel JF. The use of predictive models to develop chromatography-based purification processes. Front Bioeng Biotechnol 2022; 10:1009102. [PMID: 36312533 PMCID: PMC9605695 DOI: 10.3389/fbioe.2022.1009102] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Accepted: 09/23/2022] [Indexed: 11/13/2022] Open
Abstract
Chromatography is the workhorse of biopharmaceutical downstream processing because it can selectively enrich a target product while removing impurities from complex feed streams. This is achieved by exploiting differences in molecular properties, such as size, charge and hydrophobicity (alone or in different combinations). Accordingly, many parameters must be tested during process development in order to maximize product purity and recovery, including resin and ligand types, conductivity, pH, gradient profiles, and the sequence of separation operations. The number of possible experimental conditions quickly becomes unmanageable. Although the range of suitable conditions can be narrowed based on experience, the time and cost of the work remain high even when using high-throughput laboratory automation. In contrast, chromatography modeling using inexpensive, parallelized computer hardware can provide expert knowledge, predicting conditions that achieve high purity and efficient recovery. The prediction of suitable conditions in silico reduces the number of empirical tests required and provides in-depth process understanding, which is recommended by regulatory authorities. In this article, we discuss the benefits and specific challenges of chromatography modeling. We describe the experimental characterization of chromatography devices and settings prior to modeling, such as the determination of column porosity. We also consider the challenges that must be overcome when models are set up and calibrated, including the cross-validation and verification of data-driven and hybrid (combined data-driven and mechanistic) models. This review will therefore support researchers intending to establish a chromatography modeling workflow in their laboratory.
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Affiliation(s)
- C. R. Bernau
- Fraunhofer Institute for Molecular Biology and Applied Ecology IME, Aachen, Germany
| | - M. Knödler
- Fraunhofer Institute for Molecular Biology and Applied Ecology IME, Aachen, Germany
- Institute for Molecular Biotechnology, RWTH Aachen University, Aachen, Germany
| | - J. Emonts
- Fraunhofer Institute for Molecular Biology and Applied Ecology IME, Aachen, Germany
| | - R. C. Jäpel
- Fraunhofer Institute for Molecular Biology and Applied Ecology IME, Aachen, Germany
- Institute for Molecular Biotechnology, RWTH Aachen University, Aachen, Germany
| | - J. F. Buyel
- Fraunhofer Institute for Molecular Biology and Applied Ecology IME, Aachen, Germany
- Institute for Molecular Biotechnology, RWTH Aachen University, Aachen, Germany
- University of Natural Resources and Life Sciences, Vienna (BOKU), Department of Biotechnology (DBT), Institute of Bioprocess Science and Engineering (IBSE), Vienna, Austria
- *Correspondence: J. F. Buyel,
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Zhang J, Wang Z, Wang J, Zhang R, Dong X, Bian L. Investigation of binding mechanism for human plasminogen Kringle 5 with its potential receptor vWA1 domain in Cochlin by bio-specific technologies and molecular dynamic simulation. Bioorg Chem 2022; 127:105989. [DOI: 10.1016/j.bioorg.2022.105989] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Revised: 05/25/2022] [Accepted: 06/23/2022] [Indexed: 11/02/2022]
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3
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An Experimental and Modeling Combined Approach in Preparative Hydrophobic Interaction Chromatography. Processes (Basel) 2022. [DOI: 10.3390/pr10051027] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
Abstract
Chromatography is a technique widely used in the purification of biopharmaceuticals, and generally consists of several chromatographic steps. In this work, Hydrophobic Interaction Chromatography (HIC) is investigated as a polishing step for the purification of therapeutic proteins. Adsorption mechanisms in hydrophobic interaction chromatography are still not completely clear and a limited amount of published data is available. In addition to new data on adsorption isotherms for some proteins (obtained both by high-throughput and frontal analysis method), and a comparison of different models proposed in the literature, two different approaches are compared in this work to investigate HIC. The predictive approach exploits an in-house code that simulates the behavior of the component in the column using the model parameters found from the fitting of experimental data. The estimation approach, on the other hand, exploits commercial software in which the model parameters are found by the fitting of a few experimental chromatograms. The two approaches are validated on some bind-elute runs: the predictive approach is very informative, but the experimental effort needed is high; the estimation approach is more effective, but the knowledge gained is lower. The second approach is also applied to an in-development industrial purification process and successfully resulted in predicting the behavior of the system, allowing for optimization with a reduction in the time and amount of sample needed.
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A subtraction fitting method for independent determination of enantioselective and nonselective adsorption isotherms based on the single-component isotherms in the framework of the two-site model. J Chromatogr A 2020; 1632:461608. [DOI: 10.1016/j.chroma.2020.461608] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2020] [Revised: 10/01/2020] [Accepted: 10/04/2020] [Indexed: 11/17/2022]
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Zhang Y, Zhang R, Bai J, Liu W, Yang J, Bian L. Human laminin α3 chain G1 domain is a receptor for plasminogen Kringle 5 on human endothelial cells by biological specificity technologies and molecular dynamic. J Chromatogr A 2020; 1620:460986. [DOI: 10.1016/j.chroma.2020.460986] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2019] [Revised: 02/16/2020] [Accepted: 02/19/2020] [Indexed: 12/30/2022]
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6
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Equilibrium and kinetic differences of XOS2-XOS7 in xylo-oligosaccharides and their effects on the design of simulated moving bed purification process. Sep Purif Technol 2019. [DOI: 10.1016/j.seppur.2019.01.019] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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7
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Column chromatography for separation and fractionation of flavor-active esters on hydrophobic resins and simulation of breakthrough behavior. Sep Purif Technol 2019. [DOI: 10.1016/j.seppur.2018.05.008] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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8
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Asnin LD, Stepanova MV. Van't Hoff analysis in chiral chromatography. J Sep Sci 2018; 41:1319-1337. [DOI: 10.1002/jssc.201701264] [Citation(s) in RCA: 47] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2017] [Revised: 12/27/2017] [Accepted: 12/28/2017] [Indexed: 11/11/2022]
Affiliation(s)
- Leonid D. Asnin
- Department of Chemistry and Biotechnology; Perm National Research Polytechnic University; Perm Russia
| | - Maria V. Stepanova
- Department of Chemistry and Biotechnology; Perm National Research Polytechnic University; Perm Russia
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9
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Adsorption behavior of optical brightening agent on microfibrillated cellulose studied through inverse liquid chromatography: The need to correct for axial dispersion effect. J Chromatogr A 2018; 1533:17-29. [DOI: 10.1016/j.chroma.2017.11.055] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2017] [Revised: 11/23/2017] [Accepted: 11/24/2017] [Indexed: 11/17/2022]
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10
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Kiedorf G, Wolff T, Seidel-Morgenstern A, Hamel C. Adsorption measurements on a CrOx/γ-Al2O3 catalyst for parameter reduction in kinetic analysis. Chem Eng Sci 2016. [DOI: 10.1016/j.ces.2016.04.040] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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11
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Lu Z, MacFarlane JK, Gschwend PM. Adsorption of Organic Compounds to Diesel Soot: Frontal Analysis and Polyparameter Linear Free-Energy Relationship. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2016; 50:285-293. [PMID: 26587648 DOI: 10.1021/acs.est.5b03605] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Black carbons (BCs) dominate the sorption of many hydrophobic organic compounds (HOCs) in soils and sediments, thereby reducing the HOCs' mobilities and bioavailabilities. However, we do not have data for diverse HOCs' sorption to BC because it is time-consuming and labor-intensive to obtain isotherms on soot and other BCs. In this study, we developed a frontal analysis chromatographic method to investigate the adsorption of 21 organic compounds with diverse functional groups to NIST diesel soot. This method was precise and time-efficient, typically taking only a few hours to obtain an isotherm. Based on 102 soot-carbon normalized sorption coefficients (KsootC) acquired at different sorbate concentrations, a sorbate-activity-dependent polyparameter linear free-energy relationship was established: logKsootC = (3.74 ± 0.11)V + ((-0.35 ± 0.02)log ai)E + (-0.62 ± 0.10)A + (-3.35 ± 0.11)B + (-1.45 ± 0.09); (N = 102, R(2) = 0.96, SE = 0.18), where V, E, A, and B are the sorbate's McGowan's characteristic volume, excess molar refraction, and hydrogen acidity and basicity, respectively; and ai is the sorbate's aqueous activity reflecting the system's approach to saturation. The difference in dispersive interactions with the soot versus with the water was the dominant factor encouraging adsorption, and H-bonding interactions discouraged this process. Using this relationship, soot-water and sediment-water or soil-water adsorption coefficients of HOCs of interest (PAHs and PCBs) were estimated and compared with the results reported in the literature.
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Affiliation(s)
- Zhijiang Lu
- Ralph M. Parsons Laboratory, Department of Civil and Environmental Engineering, Massachusetts Institute of Technology 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - John K MacFarlane
- Ralph M. Parsons Laboratory, Department of Civil and Environmental Engineering, Massachusetts Institute of Technology 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Philip M Gschwend
- Ralph M. Parsons Laboratory, Department of Civil and Environmental Engineering, Massachusetts Institute of Technology 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
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Jiang L, Marcus RK. Biotin-functionalized poly(ethylene terephthalate) capillary-channeled polymer fibers as HPLC stationary phase for affinity chromatography. Anal Bioanal Chem 2014; 407:939-51. [PMID: 25410640 DOI: 10.1007/s00216-014-8235-4] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2014] [Revised: 09/08/2014] [Accepted: 10/02/2014] [Indexed: 11/25/2022]
Abstract
Native poly(ethylene terephthalate) (PET) capillary-channeled polymer (C-CP) fibers have been used as the stationary phase for high-performance liquid chromatography (HPLC) of proteins via reversed-phase and ion-exchange processes. Functionalization can be used to bring about greater selectivity through surface modification. PET fibers were treated with ethylenediamine to generate primary amine groups on the fiber surface, enabling subsequent covalent attachment of ligands. The ninhydrin test for primary amines revealed surface densities of 13.9-60.0 μmol m(-2) for PET fibers exposed for periods of 3-12 min. Here, 8-amino-3,6-dioxaoctanoic acid was linked to the EDA-treated PET fiber surface as a hydrophilic spacer, and then D-biotin was attached on the end of the spacer as an affinity ligand. The streptavidin binding capacity and binding homogeneity were studied on the biotin-functionalized PET C-CP fiber microbore column. The selectivity of the biotin surface functionalization was assessed by spiking lysate with Texas Red-labeled streptavidin and enhanced green fluorescent protein. Greater than 99% selectivity was realized. This ligand-coupling strategy from standard solid-phase peptide synthesis used in stationary phase functionalization creates great potential for PET C-CP fiber-packed HPLC columns to perform a variety of chromatographic separations.
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Affiliation(s)
- Liuwei Jiang
- Department of Chemistry, Biosystems Research Complex, Clemson University, Clemson, SC, 29634, USA
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Cecchi T, Marcotulli F. Chromatography and the hundred year mystery of inorganic ions at aqueous interfaces: adsorption of inorganic ions at the Porous Graphitic Carbon Aqueous Interface follows the Hofmeister series. J Chromatogr A 2013; 1314:106-14. [PMID: 24075459 DOI: 10.1016/j.chroma.2013.09.013] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2013] [Revised: 09/03/2013] [Accepted: 09/04/2013] [Indexed: 10/26/2022]
Abstract
Many physical phenomena are affected by the structure of water interfaces, yet it remains an active and controversial subject. A great deal of recent theoretical endeavour and computer simulations question the validity of the Onsager Samaras theory of the ion-free interface between an electrolyte solution and an hydrophobic surface. Experimental results play a crucial role in assessing the legitimacy of the theories. Experimental data are scarce, while simulation results suggest an increasing surface affinity of ions with increasing chaotropic character, in dramatic contradiction to the classical view. Chromatography is a powerful separative technique, but we originally used it as a tool to detect the adsorption of chloride electrolytes and sodium electrolytes, strongly expected to shun any dielectric boundary, onto an hydrophobic surface, and to rank ions according to their adsorbophilicities. Frontal analysis gave unequivocal experimental evidence to this unexpected phenomenon and it was used to quantify it. The infinite dilution equilibrium constants for adsorption of kosmotropes and chaotropes onto the interface were obtained and contrasted to the Jones-Dole B viscosity coefficients, that is a common quantifier of the Hofmeister effect. It is clear that (i) the more chaotropic the ion is, the more it contributes to the global adsorbophilicity of the electrolyte; (ii) the influence of the variable anion is more than twofold that of the variable cation, thereby confirming a robust observation in many other physical systems. Standard free energy of adsorption for each electrolyte was calculated and its reliability was commented upon. The central issue in this paper is the effective and ascertained adsorption of electrolytes onto an hydrophobic surface and the fact that the adsorbophilicity of an electrolyte may be inferred from its position in the Hofmeister series.
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Affiliation(s)
- Teresa Cecchi
- Accademia Delle Scienze dell'istituto di Bologna, Via Zamboni, 31, 40126 Bologna, Italy.
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Gong R, Li P, Yu J. Experiment and modeling for the separation of trans-stilbene oxide enantiomers on Chiralcel OD preparative column. J Chromatogr A 2013; 1286:119-26. [DOI: 10.1016/j.chroma.2013.02.061] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2012] [Revised: 02/02/2013] [Accepted: 02/19/2013] [Indexed: 11/30/2022]
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15
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OuYang LF, Liu Q, Liang H, Shi Y, Shi J, Yin X. Simultaneous determination of two-component isotherm parameters and lumped mass transfer coefficients in RPLC with the 0-1 model-inverse method. J Sep Sci 2013; 36:645-57. [DOI: 10.1002/jssc.201200289] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2012] [Revised: 10/29/2012] [Accepted: 11/01/2012] [Indexed: 11/12/2022]
Affiliation(s)
- Liang-fei OuYang
- Separation Science Institute; The Key Laboratory of Biomedical Information Engineering of Education Ministry; Xi'an Jiaotong University; Xi'an P. R. China
| | - Qian Liu
- Separation Science Institute; The Key Laboratory of Biomedical Information Engineering of Education Ministry; Xi'an Jiaotong University; Xi'an P. R. China
| | - Heng Liang
- Separation Science Institute; The Key Laboratory of Biomedical Information Engineering of Education Ministry; Xi'an Jiaotong University; Xi'an P. R. China
| | - Yuhua Shi
- Separation Science Institute; The Key Laboratory of Biomedical Information Engineering of Education Ministry; Xi'an Jiaotong University; Xi'an P. R. China
| | - Junwei Shi
- Separation Science Institute; The Key Laboratory of Biomedical Information Engineering of Education Ministry; Xi'an Jiaotong University; Xi'an P. R. China
| | - Xiaoguang Yin
- Separation Science Institute; The Key Laboratory of Biomedical Information Engineering of Education Ministry; Xi'an Jiaotong University; Xi'an P. R. China
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16
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Xu J, Zhu L, Xu G, Yu W, Ray AK. Determination of competitive adsorption isotherm of enantiomers on preparative chromatographic columns using inverse method. J Chromatogr A 2013; 1273:49-56. [DOI: 10.1016/j.chroma.2012.11.052] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2012] [Revised: 11/18/2012] [Accepted: 11/21/2012] [Indexed: 10/27/2022]
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17
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Recombinant protein purification using gradient-assisted simulated moving bed hydrophobic interaction chromatography. Part I: selection of chromatographic system and estimation of adsorption isotherms. J Chromatogr A 2011; 1218:6396-401. [PMID: 21816402 DOI: 10.1016/j.chroma.2011.06.111] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2010] [Revised: 05/29/2011] [Accepted: 06/29/2011] [Indexed: 11/22/2022]
Abstract
The design of gradient simulated moving bed (SMB) chromatographic processes requires an appropriate selection of the chromatographic system followed by the determination of adsorption isotherm parameters in the relevant range of mobile phase conditions. The determination of these parameters can be quite difficult for recombinant target proteins present in complex protein mixtures. The first part of this work includes the estimation of adsorption isotherm parameters for streptokinase and a lumped impurity fraction present in an Escherichia coli cell lysate for a hydrophobic interaction chromatography (HIC) matrix. Perturbation experiments were carried out using a Butyl Sepharose matrix with purified recombinant protein on buffer equilibrated columns as well as with crude cell lysate saturated columns. The Henry constants estimated for streptokinase were found to exhibit in a wide range a linear dependence on the salt concentration in the mobile phase. These parameters were applied in subsequent investigations to design a simulated moving bed (SMB) process capable to purify in a continuous manner recombinant streptokinase from the E. coli cell lysate.
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Bao Z, Su B, Xing H, Yang Y, Ren Q. Enantioseparation of racemic paroxol on an amylose-based chiral stationary phase by supercritical fluid chromatography. J Sep Sci 2010; 33:3256-62. [DOI: 10.1002/jssc.201000422] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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19
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The adsorption of Naproxen enantiomers on the chiral stationary phase ()-Whelk-O1 under reversed-phase conditions: The effect of mobile phase composition. J Chromatogr A 2010; 1217:2871-8. [DOI: 10.1016/j.chroma.2010.02.066] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2009] [Revised: 02/16/2010] [Accepted: 02/24/2010] [Indexed: 11/21/2022]
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20
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Solid phase extraction of copper(II) by fixed bed procedure on cation exchange complexing resins. J Chromatogr A 2010; 1217:1208-18. [DOI: 10.1016/j.chroma.2009.12.030] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2009] [Revised: 12/04/2009] [Accepted: 12/09/2009] [Indexed: 11/17/2022]
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Thede G, Below E, Thede R. DETERMINATION OF ADSORPTION ISOTHERMS BY THE INVERSE METHOD WITH A FIRST ORDER REVERSIBLE REACTION OCCURRING IN BOTH PHASES OF A LIQUID CHROMATOGRAPHIC COLUMN. J LIQ CHROMATOGR R T 2010. [DOI: 10.1080/10826070903574485] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
| | - Elke Below
- b Institute of Forensic Medicine, University of Greifswald ,
| | - Richard Thede
- a Institute of Biochemistry, University of Greifswald ,
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