1
|
Jakob K, Schwack W, Morlock GE. All-in-one 2LabsToGo system for analysis of ergot alkaloids in whole rye. Food Chem 2024; 453:139593. [PMID: 38761724 DOI: 10.1016/j.foodchem.2024.139593] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2023] [Revised: 04/23/2024] [Accepted: 05/07/2024] [Indexed: 05/20/2024]
Abstract
Ergot alkaloids, naturally occurring mycotoxins of Claviceps fungi, pose health risks. This necessitates accurate analysis methods to ensure food safety. This study explored the open-source miniaturized all-in-one 2LabsToGo system to analyze ergot alkaloids in whole rye samples. It is suited for sustainable atline analysis as it combines all planar chromatography tasks, allowing low-cost quality control in milling plants. The LOD and LOQ of ergocristine were determined to be 0.4 and 1.2 ng/zone, respectively. Detectability of ergot alkaloids was proven to be below the current maximum limit of 500 µg/kg for rye milling products. The repeatability (%RSD) was 4.1 % and the coefficient of determination of the analytical response (R2) was 0.9918 for ergocristine. The mean recovery rate of ergot alkaloids in spiked whole rye grain was close to 100 %. Results of screening whole rye for ergot alkaloids were successfully verified by comparison with those obtained by conventional status quo HPTLC instrumentation.
Collapse
Affiliation(s)
- Kevin Jakob
- Chair of Food Science, Institute of Nutritional Science, and TransMIT Center for Effect-Directed Analysis, Justus Liebig University Giessen, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany.
| | - Wolfgang Schwack
- Chair of Food Science, Institute of Nutritional Science, and TransMIT Center for Effect-Directed Analysis, Justus Liebig University Giessen, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany.
| | - Gertrud E Morlock
- Chair of Food Science, Institute of Nutritional Science, and TransMIT Center for Effect-Directed Analysis, Justus Liebig University Giessen, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany.
| |
Collapse
|
2
|
Nam M, Kim D, Kim MS. Simultaneous determination of total ergot alkaloids in wheat flour by Orbitrap mass spectrometry. Food Chem 2024; 441:138363. [PMID: 38199100 DOI: 10.1016/j.foodchem.2024.138363] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Revised: 01/02/2024] [Accepted: 01/03/2024] [Indexed: 01/12/2024]
Abstract
The optimization screening methods for total ergot alkaloids in wheat extracts involve transforming them into a single compound, which is then analyzed via high-resolution Orbitrap mass spectrometry (Orbitrap MS). Orbitrap MS provides highly sensitive and accurate mass measurements, enhancing the selectivity and sensitivity of the analysis. Various hydrolysis and reduction methods have been investigated, and the use of superhydrides has emerged as the most effective method for transforming ergopeptine alkaloids. This study also focused on the epimerization of ergot alkaloids, particularly the differences between R- and S-epimers and their impact on the mass spectra. We validated our method by assessing the linearity, sensitivity, recovery, matrix effects, repeatability, and stability. The limits of detection and quantitation were set at 0.43 and 1.30 μg LSA/kg wheat, respectively. The proposed method offers a robust analytical approach for screening and quantifying total ergot alkaloids in wheat samples, addressing important concerns about their presence in food and feed.
Collapse
Affiliation(s)
- Miso Nam
- Food Analysis Research Center, Korea Food Research Institute, Republic of Korea
| | - Danbi Kim
- Food Analysis Research Center, Korea Food Research Institute, Republic of Korea
| | - Min-Sun Kim
- Food Analysis Research Center, Korea Food Research Institute, Republic of Korea.
| |
Collapse
|
3
|
Poole CF. Sample preparation for planar chromatography. J Sep Sci 2023; 46:e2300071. [PMID: 36965178 DOI: 10.1002/jssc.202300071] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 03/18/2023] [Accepted: 03/19/2023] [Indexed: 03/27/2023]
Abstract
High-performance thin-layer chromatography has favorable properties for high-throughput separations with a high matrix tolerance. Sample preparation, however, is sometimes required to control specific matrix interferences and to enhance the detectability of target compounds. Trends in contemporary applications have shifted from absorbance and fluorescence detection to methods employing bioassays and mass spectrometry. Traditional methods (shake-flask, heat at reflux, Soxhlet, and hydrodistillation) are being challenged by automated instrumental approaches (ultrasound-assisted and microwave-assisted solvent extraction, pressurized liquid extraction, and supercritical fluid extraction) and the quick, easy cheap, efficient, rugged, and safe extraction method for faster and streamlined sample processing. Liquid-liquid extraction remains the most widely used approach for sample clean-up with increasing competition from solid-phase extraction. On-layer sample, clean-up by planar solid-phase extraction is increasingly used for complex samples and in combination with heart-cut multimodal systems. The automated spray-on sample applicator, the elution head interface, biological detection of target and non-target compounds, and straightforward mass spectrometric detection are highlighted as the main factors directing current interest toward faster and simpler sample workflows, analysis of more complex samples, and the determination of minor contaminants requiring high concentration factors.
Collapse
Affiliation(s)
- Colin F Poole
- Department of Chemistry, Wayne State University, Detroit, Michigan, USA
| |
Collapse
|
4
|
Wilson ID, Poole CF. Planar chromatography - Current practice and future prospects. J Chromatogr B Analyt Technol Biomed Life Sci 2023; 1214:123553. [PMID: 36495686 DOI: 10.1016/j.jchromb.2022.123553] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Revised: 11/01/2022] [Accepted: 11/24/2022] [Indexed: 11/29/2022]
Abstract
Planar chromatography, in the form of thin-layer or high-performance thin-layer chromatography (TLC, HPTLC), continues to provide a robust and widely used separation technique. It is unrivaled as a simple and rapid qualitative method for mixture analysis, or for finding bioactive components in mixtures. The format of TLC/HPTLC also provides a unique method for preserving the separation, enabling further investigation of components of interest (including quantification/structure determination) separated in both time and space from the original analysis. The current practice of planar chromatography and areas of development of the technology are reviewed and promising future directions in the use of TLC/HPTLC are outlined.
Collapse
Affiliation(s)
- Ian D Wilson
- Division of Systems Medicine, Department of Metabolism, Digestion and Reproduction, Imperial College, Burlington Danes Building, Du Cane Road, London W12 0NN, UK.
| | - Colin F Poole
- Department of Chemistry, Wayne State University, Detroit, MI 48202, USA.
| |
Collapse
|
5
|
Sing L, Schwack W, Göttsche R, Morlock GE. 2LabsToGo─Recipe for Building Your Own Chromatography Equipment Including Biological Assay and Effect Detection. Anal Chem 2022; 94:14554-14564. [PMID: 36225170 PMCID: PMC9610689 DOI: 10.1021/acs.analchem.2c02339] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2022] [Accepted: 09/19/2022] [Indexed: 11/29/2022]
Abstract
A complete recipe for building your own chromatography equipment from readily available materials is introduced. It combines sample separation (chemistry laboratory) with biological effect detection (biology laboratory). This hyphenation of two disciplines is necessary for prioritizing important compounds in complex samples. Among the thousands of compounds therein, it is often not clear which compounds are the important ones. On the same separation surface, additional detection of biological effects enables and guides substance prioritization. The newly developed open-source 2LabsToGo system for chemical and biological analysis is completely solvent-resistant and, due to miniaturization, environmentally friendly regarding the consumption of materials. It produces comparable results but is 10 times more compact (26 cm × 31 cm × 34 cm), 10 times lighter (6.8 kg), and 55 times less expensive (€ 1717) than current sophisticated commercial devices. As a proof of concept of the first 2LabsToGo system, the quality of different water samples was analyzed since clean water is becoming increasingly rare. In water, most of the thousands of substance signals or features can neither be identified nor classified toxicologically. However, methods that exploit this hyphenated strategy provide answers to such essential safety issues. Drinking or tap water did not show bioactive or toxic compounds, which was expected, whereas biogas or landfill water samples did. The hyphenated 2LabsToGo strategy is affordable and extremely useful for all laboratories with limited equipment but pressing challenges. It is ready to be used in various analytical tasks and applications.
Collapse
Affiliation(s)
- Lucas Sing
- Institute of Nutritional
Science, Chair of Food Science, and Interdisciplinary Research Center
(iFZ), Justus Liebig University Giessen, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany
| | - Wolfgang Schwack
- Institute of Nutritional
Science, Chair of Food Science, and Interdisciplinary Research Center
(iFZ), Justus Liebig University Giessen, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany
| | - Rieke Göttsche
- Institute of Nutritional
Science, Chair of Food Science, and Interdisciplinary Research Center
(iFZ), Justus Liebig University Giessen, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany
| | - Gertrud Elisabeth Morlock
- Institute of Nutritional
Science, Chair of Food Science, and Interdisciplinary Research Center
(iFZ), Justus Liebig University Giessen, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany
| |
Collapse
|
6
|
Regulated and Non-Regulated Mycotoxin Detection in Cereal Matrices Using an Ultra-High-Performance Liquid Chromatography High-Resolution Mass Spectrometry (UHPLC-HRMS) Method. Toxins (Basel) 2021; 13:toxins13110783. [PMID: 34822567 PMCID: PMC8625905 DOI: 10.3390/toxins13110783] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2021] [Revised: 11/01/2021] [Accepted: 11/04/2021] [Indexed: 11/17/2022] Open
Abstract
Cereals represent a widely consumed food commodity that might be contaminated by mycotoxins, resulting not only in potential consumer health risks upon dietary exposure but also significant financial losses due to contaminated batch disposal. Thus, continuous improvement of the performance characteristics of methods to enable an effective monitoring of such contaminants in food supply is highly needed. In this study, an ultra-high-performance liquid chromatography coupled to a hybrid quadrupole orbitrap mass analyzer (UHPLC-q-Orbitrap MS) method was optimized and validated in wheat, maize and rye flour matrices. Nineteen analytes were monitored, including both regulated mycotoxins, e.g., ochratoxin A (OTA) or deoxynivalenol (DON), and non-regulated mycotoxins, such as ergot alkaloids (EAs), which are analytes that are expected to be regulated soon in the EU. Low limits of quantification (LOQ) at the part per trillion level were achieved as well as wide linear ranges (four orders of magnitude) and recovery rates within the 68–104% range. Overall, the developed method attained fit-for-purpose results and it highlights the applicability of high-resolution mass spectrometry (HRMS) detection in mycotoxin food analysis.
Collapse
|
7
|
Chung SWC. A critical review of analytical methods for ergot alkaloids in cereals and feed and in particular suitability of method performance for regulatory monitoring and epimer-specific quantification. Food Addit Contam Part A Chem Anal Control Expo Risk Assess 2021; 38:997-1012. [PMID: 33784227 DOI: 10.1080/19440049.2021.1898679] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Abstract
Cereals and feed contaminated with ergot alkaloids (EAs) have been of concern for several decades. Nowadays, analysis of EAs is focused on ergometrine, ergotamine, ergosine, ergocristine, ergocryptine (a mixture of α- and β-isomers) and ergocornine and their related -inine epimers as listed in the European Commission Recommendation 2012/154/EU. Liquid chromatography with fluorescence detection has been used for quantification of EAs for decades whilst LC-MS has become the work-horse for quantification of EAs in the last decade. However, in LC-MS analysis matrix effects of different magnitudes exist for each EA epimer, especially ergometrine/ergometrinine, even after different clean-up procedures. This leads to an underestimation or overestimation of EAs levels. Moreover, isotopic labelled standards for EAs are still not available in the market. This review aims to provide background information on different analytical methods, discuss their advantages and disadvantages and possible advancement. Moreover, the method performance requirements to support forthcoming regulations are also discussed.
Collapse
Affiliation(s)
- Stephen W C Chung
- Independent Researcher, Formerly with the Food Research Laboratory, Centre for Food Safety, Hong Kong
| |
Collapse
|
8
|
Mehl A, Schmidt LJ, Schmidt L, Morlock GE. High-throughput planar solid-phase extraction coupled to orbitrap high-resolution mass spectrometry via the autoTLC-MS interface for screening of 66 multi-class antibiotic residues in food of animal origin. Food Chem 2021; 351:129211. [PMID: 33636534 DOI: 10.1016/j.foodchem.2021.129211] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2020] [Revised: 12/14/2020] [Accepted: 01/23/2021] [Indexed: 02/07/2023]
Abstract
Antibiotic residues in food pose a major threat to the health of humans and animals worldwide. Their trace-level analysis is still too time- and cost-intensive to be adequately covered in routine analysis. Thus, a new high-throughput planar solid-phase extraction method has been developed for rapid screening of 66 antibiotics. Via simple clicks on the image, the autoTLC-MS interface automatically eluted the target analyte zones directly into an orbitrap high-resolution mass spectrometer operated in the variable data-independent acquisition mode. Muscle tissue, cow milk and chicken eggs were analyzed regarding nine different antibiotic classes, including sulfonamides, diaminopyrimidines, lincosamides, pleuromutilins, macrolides, cephalosporins, penicillins, amphenicols and nitroimidazoles. The planar clean-up took 7 min per sample, which is 5-fold faster than the routine state-of-the-art. The screening method has been validated for one representative of each class according to the European Commission Decision 2002/657/EC. Most analytes were successfully detected at half of their required maximum residue limit.
Collapse
Affiliation(s)
- Annabel Mehl
- Chair of Food Science, Institute of Nutritional Science, and Interdisciplinary Research Center, Justus Liebig University Giessen, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany
| | - Lena J Schmidt
- Chair of Food Science, Institute of Nutritional Science, and Interdisciplinary Research Center, Justus Liebig University Giessen, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany
| | - Laszlo Schmidt
- Chair of Food Science, Institute of Nutritional Science, and Interdisciplinary Research Center, Justus Liebig University Giessen, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany
| | - Gertrud E Morlock
- Chair of Food Science, Institute of Nutritional Science, and Interdisciplinary Research Center, Justus Liebig University Giessen, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany.
| |
Collapse
|
9
|
Sherma J, Rabel F. Review of advances in planar chromatography-mass spectrometry published in the period 2015–2019. J LIQ CHROMATOGR R T 2020. [DOI: 10.1080/10826076.2020.1725561] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Joseph Sherma
- Department of Chemistry, Lafayette College, Easton, PA, USA
| | | |
Collapse
|
10
|
Gu L, Tian T, Xia L, Chou G, Wang Z. Rapid Isolation of a Dipeptidyl Peptidase IV Inhibitor from Fritillaria cirrhosa by Thin-Layer Chromatography–Bioautography and Mass Spectrometry-Directed Autopurification System. JPC-J PLANAR CHROMAT 2019. [DOI: 10.1556/1006.2019.32.6.1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Affiliation(s)
- Lihua Gu
- Key Laboratory of Standardization of Chinese Medicines, Ministry of Education, Institute of Chinese Materia Medica, Shanghai University of Traditional Chinese Medicine, Shanghai, China
- Shanghai R&D Centre for Standardization of Chinese Medicines, Shanghai, China
| | - Tong Tian
- Key Laboratory of Standardization of Chinese Medicines, Ministry of Education, Institute of Chinese Materia Medica, Shanghai University of Traditional Chinese Medicine, Shanghai, China
| | - Li Xia
- Key Laboratory of Standardization of Chinese Medicines, Ministry of Education, Institute of Chinese Materia Medica, Shanghai University of Traditional Chinese Medicine, Shanghai, China
- Shanghai R&D Centre for Standardization of Chinese Medicines, Shanghai, China
| | - Guixin Chou
- Key Laboratory of Standardization of Chinese Medicines, Ministry of Education, Institute of Chinese Materia Medica, Shanghai University of Traditional Chinese Medicine, Shanghai, China
- Shanghai R&D Centre for Standardization of Chinese Medicines, Shanghai, China
| | - Zhengtao Wang
- Key Laboratory of Standardization of Chinese Medicines, Ministry of Education, Institute of Chinese Materia Medica, Shanghai University of Traditional Chinese Medicine, Shanghai, China
- Shanghai R&D Centre for Standardization of Chinese Medicines, Shanghai, China
| |
Collapse
|
11
|
Oellig C, Hammel YA. Screening for chlorinated paraffins in vegetable oils and oil-based dietary supplements by planar solid phase extraction. J Chromatogr A 2019; 1606:460380. [DOI: 10.1016/j.chroma.2019.460380] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2019] [Revised: 07/14/2019] [Accepted: 07/17/2019] [Indexed: 11/30/2022]
|
12
|
Screening for estrogen active nonylphenols in surface waters by planar solid phase extraction–planar yeast estrogen screen. Anal Bioanal Chem 2019; 411:6767-6775. [DOI: 10.1007/s00216-019-02053-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2019] [Revised: 07/15/2019] [Accepted: 07/26/2019] [Indexed: 12/19/2022]
|
13
|
Wagner M, Oellig C. Screening for mineral oil saturated and aromatic hydrocarbons in paper and cardboard directly by planar solid phase extraction and by its coupling to gas chromatography. J Chromatogr A 2019; 1588:48-57. [DOI: 10.1016/j.chroma.2018.12.043] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2018] [Revised: 12/14/2018] [Accepted: 12/19/2018] [Indexed: 10/27/2022]
|
14
|
La Nasa J, Lucejko JJ, Humpf HU, Ribechini E. Advancements in the chemical structures of Ergot acyl glycerides by high performances liquid chromatography coupled with high resolution mass spectrometry. Microchem J 2018. [DOI: 10.1016/j.microc.2018.05.021] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
|
15
|
Belwal T, Ezzat SM, Rastrelli L, Bhatt ID, Daglia M, Baldi A, Devkota HP, Orhan IE, Patra JK, Das G, Anandharamakrishnan C, Gomez-Gomez L, Nabavi SF, Nabavi SM, Atanasov AG. A critical analysis of extraction techniques used for botanicals: Trends, priorities, industrial uses and optimization strategies. Trends Analyt Chem 2018. [DOI: 10.1016/j.trac.2017.12.018] [Citation(s) in RCA: 200] [Impact Index Per Article: 33.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
|
16
|
Li M, Chen X, Hu S, Wang R, Peng X, Bai X. Determination of blood concentrations of main active compounds in Zi-Cao-Cheng-Qi decoction and their total plasma protein binding rates based on hollow fiber liquid phase microextraction coupled with high performance liquid chromatography. J Chromatogr B Analyt Technol Biomed Life Sci 2018; 1072:355-361. [DOI: 10.1016/j.jchromb.2017.11.046] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2017] [Revised: 11/21/2017] [Accepted: 11/30/2017] [Indexed: 11/24/2022]
|
17
|
Oellig C, Radovanovic J. Screening for 16- O -methylcafestol in roasted coffee by high-performance thin-layer chromatography–fluorescence detection – Determination of Coffea canephora admixtures to Coffea arabica. J Chromatogr A 2017; 1525:173-180. [DOI: 10.1016/j.chroma.2017.10.031] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2017] [Accepted: 10/10/2017] [Indexed: 12/01/2022]
|
18
|
Lysergic acid amide as chemical marker for the total ergot alkaloids in rye flour – Determination by high-performance thin-layer chromatography–fluorescence detection. J Chromatogr A 2017; 1507:124-131. [DOI: 10.1016/j.chroma.2017.05.043] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2017] [Revised: 05/16/2017] [Accepted: 05/18/2017] [Indexed: 10/19/2022]
|
19
|
Petruczynik A, Misiurek J, Serafin S, Waksmundzka-Hajnos M. The effect of chromatographic conditions on the separation of selected alkaloids on CN-silica layers. J LIQ CHROMATOGR R T 2017. [DOI: 10.1080/10826076.2017.1298027] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- A. Petruczynik
- Department of Inorganic Chemistry, Medical University of Lublin, Lublin, Poland
| | - J. Misiurek
- Department of Inorganic Chemistry, Medical University of Lublin, Lublin, Poland
| | - S. Serafin
- Department of Inorganic Chemistry, Medical University of Lublin, Lublin, Poland
| | | |
Collapse
|
20
|
Comte A, Gräfenhan T, Links MG, Hemmingsen SM, Dumonceaux TJ. Quantitative molecular diagnostic assays of grain washes for Claviceps purpurea are correlated with visual determinations of ergot contamination. PLoS One 2017; 12:e0173495. [PMID: 28257512 PMCID: PMC5336299 DOI: 10.1371/journal.pone.0173495] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2016] [Accepted: 02/21/2017] [Indexed: 11/23/2022] Open
Abstract
We examined the epiphytic microbiome of cereal grain using the universal barcode chaperonin-60 (cpn60). Microbial community profiling of seed washes containing DNA extracts prepared from field-grown cereal grain detected sequences from a fungus identified only to Class Sordariomycetes. To identify the fungal sequence and to improve the reference database, we determined cpn60 sequences from field-collected and reference strains of the ergot fungus, Claviceps purpurea. These data allowed us to identify this fungal sequence as deriving from C. purpurea, and suggested that C. purpurea DNA is readily detectable on agricultural commodities, including those for which ergot was not identified as a grading factor. To get a sense of the prevalence and level of C. purpurea DNA in cereal grains, we developed a quantitative PCR assay based on the fungal internal transcribed spacer (ITS) and applied it to 137 samples from the 2014 crop year. The amount of Claviceps DNA quantified correlated strongly with the proportion of ergot sclerotia identified in each grain lot, although there was evidence that non-target organisms were responsible for some false positives with the ITS-based assay. We therefore developed a cpn60-targeted loop-mediated isothermal amplification assay and applied it to the same grain wash samples. The time to positive displayed a significant, inverse correlation to ergot levels determined by visual ratings. These results indicate that both laboratory-based and field-adaptable molecular diagnostic assays can be used to detect and quantify pathogen load in bulk commodities using cereal grain washes.
Collapse
Affiliation(s)
- Alexia Comte
- Agriculture and Agri-Food Canada Saskatoon Research and Development Centre, Saskatoon, Saskatchewan, Canada
| | - Tom Gräfenhan
- Grain Research Laboratory, Canadian Grain Commission, Winnipeg, Manitoba, Canada
| | - Matthew G. Links
- Agriculture and Agri-Food Canada Saskatoon Research and Development Centre, Saskatoon, Saskatchewan, Canada
- Department of Computer Science, University of Saskatchewan, Saskatoon, Saskatchewan, Canada
| | - Sean M. Hemmingsen
- National Research Council Canada, Saskatoon, Saskatchewan, Canada
- Department of Microbiology and Immunology, University of Saskatchewan, Saskatoon, Saskatchewan, Canada
| | - Tim J. Dumonceaux
- Agriculture and Agri-Food Canada Saskatoon Research and Development Centre, Saskatoon, Saskatchewan, Canada
- Department of Veterinary Microbiology, University of Saskatchewan, Saskatoon, Saskatchewan, Canada
| |
Collapse
|
21
|
Berthiller F, Brera C, Iha M, Krska R, Lattanzio V, MacDonald S, Malone R, Maragos C, Solfrizzo M, Stranska-Zachariasova M, Stroka J, Tittlemier S. Developments in mycotoxin analysis: an update for 2015-2016. WORLD MYCOTOXIN J 2017. [DOI: 10.3920/wmj2016.2138] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
This review summarises developments in the determination of mycotoxins over a period between mid-2015 and mid-2016. Analytical methods to determine aflatoxins, Alternaria toxins, ergot alkaloids, fumonisins, ochratoxins, patulin, trichothecenes and zearalenone are covered in individual sections. Advances in proper sampling strategies are discussed in a dedicated section, as are methods used to analyse botanicals and spices and newly developed liquid chromatography mass spectrometry based multi-mycotoxin methods. This critical review aims to briefly discuss the most important recent developments and trends in mycotoxin determination as well as to address limitations of presented methodologies.
Collapse
Affiliation(s)
- F. Berthiller
- Christian Doppler Laboratory for Mycotoxin Metabolism and Center for Analytical Chemistry, Department of Agrobiotechnology (IFA-Tulln), University of Natural Resources and Life Sciences, Vienna, Konrad Lorenz Str. 20, 3430 Tulln, Austria
| | - C. Brera
- Istituto Superiore di Sanità, Department of Veterinary Public Health and Food Safety – GMO and Mycotoxins Unit, Viale Regina Elena 299, 00161 Rome, Italy
| | - M.H. Iha
- Adolfo Lutz Institute of Ribeirão Preto, Nucleous of Chemistry and Bromatology Science, Rua Minas 866, Ribeirão Preto, SP 14085-410, Brazil
| | - R. Krska
- Christian Doppler Laboratory for Mycotoxin Metabolism and Center for Analytical Chemistry, Department of Agrobiotechnology (IFA-Tulln), University of Natural Resources and Life Sciences, Vienna, Konrad Lorenz Str. 20, 3430 Tulln, Austria
| | - V.M.T. Lattanzio
- National Research Council, Institute of Sciences of Food Production, Via Amendola 122/o, 700126 Bari, Italy
| | - S. MacDonald
- Fera Science Ltd., Sand Hutton, York YO41 1LZ, United Kingdom
| | - R.J. Malone
- Trilogy Analytical Laboratory, 870 Vossbrink Dr, Washington, MO 63090, USA
| | - C. Maragos
- USDA-ARS-NCAUR, Mycotoxin Prevention and Applied Microbiology Research Unit, 1815 N. University St, Peoria, IL 61604, USA
| | - M. Solfrizzo
- National Research Council, Institute of Sciences of Food Production, Via Amendola 122/o, 700126 Bari, Italy
| | - M. Stranska-Zachariasova
- Department of Food Analysis and Nutrition, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague 6, Czech Republic
| | - J. Stroka
- European Commission, Joint Research Centre, Retieseweg, 2440 Geel, Belgium
| | - S.A. Tittlemier
- Canadian Grain Commission, Grain Research Laboratory, 1404-303 Main St, Winnipeg, MB R3C 3G8, Canada
| |
Collapse
|