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Liu H, Ruan M, Mao P, Wang Z, Chen H, Weng Y. Unraveling the excited-state vibrational cooling dynamics of chlorophyll-a using femtosecond broadband fluorescence spectroscopy. J Chem Phys 2024; 160:205101. [PMID: 38804490 DOI: 10.1063/5.0203819] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2024] [Accepted: 05/13/2024] [Indexed: 05/29/2024] Open
Abstract
Understanding the dynamics of excited-state vibrational energy relaxation in photosynthetic pigments is crucial for elucidating the mechanisms underlying energy transfer processes in light-harvesting complexes. Utilizing advanced femtosecond broadband transient fluorescence (TF) spectroscopy, we explored the excited-state vibrational dynamics of Chlorophyll-a (Chl-a) both in solution and within the light-harvesting complex II (LHCII). We discovered a vibrational cooling (VC) process occurring over ∼6 ps in Chl-a in ethanol solution following Soret band excitation, marked by a notable ultrafast TF blueshift and spectral narrowing. This VC process, crucial for regulating the vibronic lifetimes, was further elucidated through the direct observation of the population dynamics of higher vibrational states within the Qy electronic state. Notably, Chl-a within LHCII demonstrated significantly faster VC dynamics, unfolding within a few hundred femtoseconds and aligning with the ultrafast energy transfer processes observed within the complex. Our findings shed light on the complex interaction between electronic and vibrational states in photosynthetic pigments, underscoring the pivotal role of vibrational dynamics in enabling efficient energy transfer within light-harvesting complexes.
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Affiliation(s)
- Heyuan Liu
- The Laboratory of Soft Matter Physics, Beijing National Laboratory for Condensed Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- School of Physical Science, University of the Chinese Academy of Sciences, Beijing 100049, China
| | - Meixia Ruan
- The Laboratory of Soft Matter Physics, Beijing National Laboratory for Condensed Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- School of Physical Science, University of the Chinese Academy of Sciences, Beijing 100049, China
| | - Pengcheng Mao
- Analysis and Testing Center, Beijing Institute of Technology, Beijing 100081, China
| | - Zhuan Wang
- The Laboratory of Soft Matter Physics, Beijing National Laboratory for Condensed Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
| | - Hailong Chen
- The Laboratory of Soft Matter Physics, Beijing National Laboratory for Condensed Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- School of Physical Science, University of the Chinese Academy of Sciences, Beijing 100049, China
- Songshan Lake Materials Laboratory, Dongguan, Guangdong 523808, China
| | - Yuxiang Weng
- The Laboratory of Soft Matter Physics, Beijing National Laboratory for Condensed Matter Physics, Institute of Physics, Chinese Academy of Sciences, Beijing 100190, China
- School of Physical Science, University of the Chinese Academy of Sciences, Beijing 100049, China
- Songshan Lake Materials Laboratory, Dongguan, Guangdong 523808, China
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2
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Timmer D, Lünemann DC, Riese S, Sio AD, Lienau C. Full visible range two-dimensional electronic spectroscopy with high time resolution. OPTICS EXPRESS 2024; 32:835-847. [PMID: 38175103 DOI: 10.1364/oe.511906] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2023] [Accepted: 12/14/2023] [Indexed: 01/05/2024]
Abstract
Two-dimensional electronic spectroscopy (2DES) is a powerful method to study coherent and incoherent interactions and dynamics in complex quantum systems by correlating excitation and detection energies in a nonlinear spectroscopy experiment. Such dynamics can be probed with a time resolution limited only by the duration of the employed laser pulses and in a spectral range defined by the pulse spectrum. In the blue spectral range (<500 nm), the generation of sufficiently broadband ultrashort pulses with pulse durations of 10 fs or less has been challenging so far. Here, we present a 2DES setup based on a hollow-core fiber supercontinuum covering the full visible range (400-700 nm). Pulse compression via custom-made chirped mirrors yields a time resolution of <10 fs. The broad spectral coverage, in particular the extension of the pulse spectra into the blue spectral range, unlocks new possibilities for coherent investigations of blue-light absorbing and multichromophoric compounds, as demonstrated by a 2DES measurement of chlorophyll a.
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3
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Götze JP, Lokstein H. Excitation Energy Transfer between Higher Excited States of Photosynthetic Pigments: 2. Chlorophyll b is a B Band Excitation Trap. ACS OMEGA 2023; 8:40015-40023. [PMID: 37929150 PMCID: PMC10620878 DOI: 10.1021/acsomega.3c05896] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Accepted: 09/21/2023] [Indexed: 11/07/2023]
Abstract
Chlorophylls (Chls) are known for fast, subpicosecond internal conversion (IC) from ultraviolet/blue absorbing ("B" or "Soret" states) to the energetically lower, red light-absorbing Q states. Consequently, excitation energy transfer (EET) in photosynthetic pigment-protein complexes involving the B states has so far not been considered. We present, for the first time, a theoretical framework for the existence of B-B EET in tightly coupled Chl aggregates such as photosynthetic pigment-protein complexes. We show that according to a Förster resonance energy transport (FRET) scheme, unmodulated B-B EET has an unexpectedly high range. Unsuppressed, it could pose an existential threat-the damage potential of blue light for photochemical reaction centers (RCs) is well-known. This insight reveals so-far undescribed roles for carotenoids (Crts, cf. previous article in this series) and Chl b (this article) of possibly vital importance. Our model system is the photosynthetic antenna pigment-protein complex (CP29). The focus of the study is on the role of Chl b for EET in the Q and B bands. Further, the initial excited pigment distribution in the B band is computed for relevant solar irradiation and wavelength-centered laser pulses. It is found that both accessory pigment classes compete efficiently with Chl a absorption in the B band, leaving only 40% of B band excitations for Chl a. B state population is preferentially relocated to Chl b after excitation of any Chls, due to a near-perfect match of Chl b B band absorption with Chl a B state emission spectra. This results in an efficient depletion of the Chl a population (0.66 per IC/EET step, as compared to 0.21 in a Chl a-only system). Since Chl b only occurs in the peripheral antenna complexes of plants and algae, and RCs contain only Chl a, this would automatically trap potentially dangerous B state population in the antennae, preventing forwarding to the RCs.
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Affiliation(s)
- Jan P. Götze
- Institut
für Chemie und Biochemie, Fachbereich Biologie Chemie Pharmazie, Freie Universität Berlin, Arnimallee 22, 14195 Berlin, Germany
| | - Heiko Lokstein
- Department
of Chemical Physics and Optics, Charles
University, Ke Karlovu
3, 121 16 Prague
2, Czech Republic
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4
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Seibt J, Lindorfer D, Renger T. Signatures of intramolecular vibrational and vibronic Q[Formula: see text]-Q[Formula: see text] coupling effects in absorption and CD spectra of chlorophyll dimers. PHOTOSYNTHESIS RESEARCH 2023; 156:19-37. [PMID: 36040654 PMCID: PMC10070234 DOI: 10.1007/s11120-022-00946-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Accepted: 07/25/2022] [Indexed: 06/15/2023]
Abstract
An electron-vibrational coupling model that includes the vibronic (non-adiabatic) coupling between the Q[Formula: see text] and Q[Formula: see text] transitions of chlorophyll (Chl), created by Reimers and coworkers (Scientific Rep. 3, 2761, 2013) is extended here to chlorophyll dimers with interchlorophyll excitonic coupling. The model is applied to a Chl a dimer of the water-soluble chlorophyll binding protein (WSCP). As for isolated chlorophyll, the vibronic coupling is found to have a strong influence on the high-frequency vibrational sideband in the absorption spectrum, giving rise to a band splitting. In contrast, in the CD spectrum the interplay of vibronic coupling and static disorder leads to a strong suppression of the vibrational sideband in excellent agreement with the experimental data. The conservative nature of the CD spectrum in the low-energy region is found to be caused by a delicate balance of the intermonomer excitonic coupling between the purely electronic Q[Formula: see text] transition and the Q[Formula: see text] transition involving intramolecular vibrational excitations on one hand and the coupling to higher-energy electronic transitions on the other hand.
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Affiliation(s)
- Joachim Seibt
- Institut für Theoretische Physik, Johannes Kepler Universität Linz, Altenberger Str. 69, 4040, Linz, Austria.
| | - Dominik Lindorfer
- Institut für Theoretische Physik, Johannes Kepler Universität Linz, Altenberger Str. 69, 4040, Linz, Austria
| | - Thomas Renger
- Institut für Theoretische Physik, Johannes Kepler Universität Linz, Altenberger Str. 69, 4040, Linz, Austria
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5
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Šímová I, Kuznetsova V, Gardiner AT, Šebelík V, Koblížek M, Fuciman M, Polívka T. Carotenoid responds to excess energy dissipation in the LH2 complex from Rhodoblastus acidophilus. PHOTOSYNTHESIS RESEARCH 2022; 154:75-87. [PMID: 36066816 DOI: 10.1007/s11120-022-00952-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Accepted: 08/17/2022] [Indexed: 06/15/2023]
Abstract
The functions of both (bacterio) chlorophylls and carotenoids in light-harvesting complexes have been extensively studied during the past decade, yet, the involvement of BChl a high-energy Soret band in the cascade of light-harvesting processes still remains a relatively unexplored topic. Here, we present transient absorption data recorded after excitation of the Soret band in the LH2 complex from Rhodoblastus acidophilus. Comparison of obtained data to those recorded after excitation of rhodopin glucoside and B800 BChl a suggests that no Soret-to-Car energy transfer pathway is active in LH2 complex. Furthermore, a spectrally rich pattern observed in the spectral region of rhodopin glucoside ground state bleaching (420-550 nm) has been assigned to an electrochromic shift. The results of global fitting analysis demonstrate two more features. A 6 ps component obtained exclusively after excitation of the Soret band has been assigned to the response of rhodopin glucoside to excess energy dissipation in LH2. Another time component, ~ 450 ps, appearing independently of the excitation wavelength was assigned to BChl a-to-Car triplet-triplet transfer. Presented data demonstrate several new features of LH2 complex and its behavior following the excitation of the Soret band.
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Affiliation(s)
- Ivana Šímová
- Department of Physics, Faculty of Science, University of South Bohemia, Branišovská, 1760, 370 05, Ceske Budejovice, Czech Republic
| | - Valentyna Kuznetsova
- Department of Physics, Faculty of Science, University of South Bohemia, Branišovská, 1760, 370 05, Ceske Budejovice, Czech Republic
| | - Alastair T Gardiner
- Laboratory of Anoxygenic Phototrophs, Institute of Microbiology, Czech Academy of Sciences, 379 81, Třeboň, Czech Republic
| | - Václav Šebelík
- Department of Physics, Faculty of Science, University of South Bohemia, Branišovská, 1760, 370 05, Ceske Budejovice, Czech Republic
- Dynamical Spectroscopy, Department of Chemistry, Technical University of Munich, Lichtenbergstraße 4, 85748, Garching b. Munich, Germany
| | - Michal Koblížek
- Laboratory of Anoxygenic Phototrophs, Institute of Microbiology, Czech Academy of Sciences, 379 81, Třeboň, Czech Republic
| | - Marcel Fuciman
- Department of Physics, Faculty of Science, University of South Bohemia, Branišovská, 1760, 370 05, Ceske Budejovice, Czech Republic
| | - Tomáš Polívka
- Department of Physics, Faculty of Science, University of South Bohemia, Branišovská, 1760, 370 05, Ceske Budejovice, Czech Republic.
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6
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Cherepanov DA, Petrova AA, Mamedov MD, Vishnevskaya AI, Gostev FE, Shelaev IV, Aybush AV, Nadtochenko VA. Comparative Absorption Dynamics of the Singlet Excited States of Chlorophylls a and d. BIOCHEMISTRY. BIOKHIMIIA 2022; 87:1179-1186. [PMID: 36273886 DOI: 10.1134/s000629792210011x] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2022] [Revised: 04/19/2022] [Accepted: 05/06/2022] [Indexed: 06/16/2023]
Abstract
Transient absorption dynamics of chlorophylls a and d dissolved in tetrahydrofuran was measured by the broadband femtosecond laser pump-probe spectroscopy in a spectral range from 400 to 870 nm. The absorption spectra of the excited S1 singlet states of chlorophylls a and d were recorded, and the dynamics of the of the Qy band shift of the stimulated emission (Stokes shift of fluorescence) was determined in a time range from 60 fs to 4 ps. The kinetics of the intramolecular conversion Qx→Qy (electronic transition S2→S1) was measured; the characteristic relaxation time was 54 ± 3 and 45 ± 9 fs for chlorophylls a and d, respectively.
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Affiliation(s)
- Dmitry A Cherepanov
- N. N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, 119991, Russia.
- A. N. Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119992, Russia
| | - Anastasia A Petrova
- A. N. Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119992, Russia
| | - Mahir D Mamedov
- A. N. Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119992, Russia
| | - Anna I Vishnevskaya
- A. N. Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119992, Russia
| | - Fedor E Gostev
- N. N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, 119991, Russia
| | - Ivan V Shelaev
- N. N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, 119991, Russia
- A. N. Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119992, Russia
| | - Arseniy V Aybush
- N. N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, 119991, Russia
| | - Victor A Nadtochenko
- N. N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, 119991, Russia
- Faculty of Chemistry, Lomonosov Moscow State University, Moscow, 119991, Russia
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7
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Do TN, Nguyen HL, Caffarri S, Tan HS. Two-dimensional electronic spectroscopy of the Q x to Q y relaxation of chlorophylls a in photosystem II core complex. J Chem Phys 2022; 156:145102. [DOI: 10.1063/5.0079500] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Using two-dimensional electronic spectroscopy, we measured the Qx to Qy transfer dynamics of the chlorophyll a (Chl a) manifold in the photosystem II (PSII) monomeric core complex from Arabidopsis thaliana. A PSII monomeric core consists of 35 Chls a and no Chl b, thus allowing for a clear window to study Chl a Qx dynamics in a large pigment-protein complex. Initial excitation in the Qx band results in a transfer to the Qy band in less than 60 fs. Upon the ultrafast transfer, regardless of the excitation frequency within the Qx band, the quasi-transient absorption spectra are very similar. This observation indicates that Chl a’s Qx to Qy transfer is not frequency selective. Using a simple model, we determined that this is not due to the lifetime broadening of the ultrafast transfer but predominantly due to a lack of correlation between the PSII core complex’s Chl a Qx and Qy bands. We suggest the origin to be the intrinsic loss of correlation during the Qx to Qy internal conversion as observed in previous studies of molecular Chl a dissolved in solvents.
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Affiliation(s)
- Thanh Nhut Do
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore, 637371
| | - Hoang Long Nguyen
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore, 637371
| | - Stefano Caffarri
- Aix Marseille Université, CEA, CNRS, BIAM, UMR7265, LGBP Team, 13009 Marseille, France
| | - Howe-Siang Tan
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore, 637371
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8
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Reiter S, Bäuml L, Hauer J, de Vivie-Riedle R. Q-Band relaxation in chlorophyll: new insights from multireference quantum dynamics. Phys Chem Chem Phys 2022; 24:27212-27223. [DOI: 10.1039/d2cp02914f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
The ultrafast relaxation within the Q-bands of chlorophyll plays a crucial role in photosynthetic light-harvesting. We investigate this process via nuclear and electronic quantum dynamics on multireference potential energy surfaces.
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Affiliation(s)
- Sebastian Reiter
- Department of Chemistry, Ludwig-Maximilians-Universität München, Butenandtstr. 11, 81377 Munich, Germany
| | - Lena Bäuml
- Department of Chemistry, Ludwig-Maximilians-Universität München, Butenandtstr. 11, 81377 Munich, Germany
| | - Jürgen Hauer
- Department of Chemistry, Technical University of Munich, Lichtenbergstr. 4, 85747 Garching, Germany
| | - Regina de Vivie-Riedle
- Department of Chemistry, Ludwig-Maximilians-Universität München, Butenandtstr. 11, 81377 Munich, Germany
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9
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Hancock AM, Son M, Nairat M, Wei T, Jeuken LJC, Duffy CDP, Schlau-Cohen GS, Adams PG. Ultrafast energy transfer between lipid-linked chromophores and plant light-harvesting complex II. Phys Chem Chem Phys 2021; 23:19511-19524. [PMID: 34524278 PMCID: PMC8442836 DOI: 10.1039/d1cp01628h] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Light-Harvesting Complex II (LHCII) is a membrane protein found in plant chloroplasts that has the crucial role of absorbing solar energy and subsequently performing excitation energy transfer to the reaction centre subunits of Photosystem II. LHCII provides strong absorption of blue and red light, however, it has minimal absorption in the green spectral region where solar irradiance is maximal. In a recent proof-of-principle study, we enhanced the absorption in this spectral range by developing a biohybrid system where LHCII proteins together with lipid-linked Texas Red (TR) chromophores were assembled into lipid membrane vesicles. The utility of these systems was limited by significant LHCII quenching due to protein-protein interactions and heterogeneous lipid structures. Here, we organise TR and LHCII into a lipid nanodisc, which provides a homogeneous, well-controlled platform to study the interactions between TR molecules and single LHCII complexes. Fluorescence spectroscopy determined that TR-to-LHCII energy transfer has an efficiency of at least 60%, resulting in a 262% enhancement of LHCII fluorescence in the 525-625 nm range, two-fold greater than in the previous system. Ultrafast transient absorption spectroscopy revealed two time constants of 3.7 and 128 ps for TR-to-LHCII energy transfer. Structural modelling and theoretical calculations indicate that these timescales correspond to TR-lipids that are loosely- or tightly-associated with the protein, respectively, with estimated TR-to-LHCII separations of ∼3.5 nm and ∼1 nm. Overall, we demonstrate that a nanodisc-based biohybrid system provides an idealised platform to explore the photophysical interactions between extrinsic chromophores and membrane proteins with potential applications in understanding more complex natural or artificial photosynthetic systems.
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Affiliation(s)
- Ashley M Hancock
- School of Physics and Astronomy, University of Leeds, Leeds LS2 9JT, UK. .,Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, UK
| | - Minjung Son
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Ave, Cambridge, MA 02139, USA.
| | - Muath Nairat
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Ave, Cambridge, MA 02139, USA.
| | - Tiejun Wei
- School of Biological and Chemical Sciences, Queen Mary University of London, Mile End Road, London E1 4NS, UK
| | - Lars J C Jeuken
- Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, UK.,Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, UK.,Leiden Institute of Chemistry, Leiden University, 2300 RA Leiden, The Netherlands
| | - Christopher D P Duffy
- School of Biological and Chemical Sciences, Queen Mary University of London, Mile End Road, London E1 4NS, UK
| | - Gabriela S Schlau-Cohen
- Department of Chemistry, Massachusetts Institute of Technology, 77 Massachusetts Ave, Cambridge, MA 02139, USA.
| | - Peter G Adams
- School of Physics and Astronomy, University of Leeds, Leeds LS2 9JT, UK. .,Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, UK
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10
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Fortino M, Collini E, Bloino J, Pedone A. Unraveling the internal conversion process within the Q-bands of a chlorophyll-like-system through surface-hopping molecular dynamics simulations. J Chem Phys 2021; 154:094110. [PMID: 33685164 DOI: 10.1063/5.0039949] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The non-radiative relaxation process within the Q-bands of chlorophylls represents a crucial preliminary step during the photosynthetic mechanism. Despite several experimental and theoretical efforts performed in order to clarify the complex dynamics characterizing this stage, a complete understanding of this mechanism is still far to be reached. In this study, non-adiabatic excited-state molecular dynamic simulations have been performed to model the non-radiative process within the Q-bands for a model system of chlorophylls. This system has been considered in the gas phase and then, to have a more representative picture of the environment, with implicit and mixed implicit-explicit solvation models. In the first part of this analysis, absorption spectra have been simulated for each model in order to guide the setup for the non-adiabatic excited-state molecular dynamic simulations. Then, non-adiabatic excited-state molecular dynamic simulations have been performed on a large set of independent trajectories and the population of the Qx and Qy states has been computed as the average of all the trajectories, estimating the rate constant for the process. Finally, with the aim of investigating the possible role played by the solvent in the Qx-Qy crossing mechanism, an essential dynamic analysis has been performed on the generated data, allowing one to find the most important motions during the simulated dynamics.
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Affiliation(s)
| | | | | | - Alfonso Pedone
- Università di Modena e Reggio Emilia, Modena 45125, Italy
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11
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Utilization of blue-green light by chlorosomes from the photosynthetic bacterium Chloroflexus aurantiacus: Ultrafast excitation energy conversion and transfer. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2021; 1862:148396. [PMID: 33581107 DOI: 10.1016/j.bbabio.2021.148396] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 09/07/2020] [Revised: 02/01/2021] [Accepted: 02/05/2021] [Indexed: 01/14/2023]
Abstract
Chlorosomes of photosynthetic green bacteria are unique molecular assemblies providing efficient light harvesting followed by multi-step transfer of excitation energy to reaction centers. In each chlorosome, 104-105 bacteriochlorophyll (BChl) c/d/e molecules are organized by self-assembly into high-ordered aggregates. We studied the early-time dynamics of the excitation energy flow and energy conversion in chlorosomes isolated from Chloroflexus (Cfx.) aurantiacus bacteria by pump-probe spectroscopy with 30-fs temporal resolution at room temperature. Both the S2 state of carotenoids (Cars) and the Soret states of BChl c were excited at ~490 nm, and absorption changes were probed at 400-900 nm. A global analysis of spectroscopy data revealed that the excitation energy transfer (EET) from Cars to BChl c aggregates occurred within ~100 fs, and the Soret → Q energy conversion in BChl c occurred faster within ~40 fs. This conclusion was confirmed by a detailed comparison of the early exciton dynamics in chlorosomes with different content of Cars. These processes are accompanied by excitonic and vibrational relaxation within 100-270 fs. The well-known EET from BChl c to the baseplate BChl a proceeded on a ps time-scale. We showed that the S1 state of Cars does not participate in EET. We discussed the possible presence (or absence) of an intermediate state that might mediates the Soret → Qy internal conversion in chlorosomal BChl c. We discussed a possible relationship between the observed exciton dynamics and the structural heterogeneity of chlorosomes.
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12
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Bukartė E, Haufe A, Paleček D, Büchel C, Zigmantas D. Revealing vibronic coupling in chlorophyll c1 by polarization-controlled 2D electronic spectroscopy. Chem Phys 2020. [DOI: 10.1016/j.chemphys.2019.110643] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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13
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Do TN, Khyasudeen MF, Nowakowski PJ, Zhang Z, Tan HS. Measuring Ultrafast Spectral Diffusion and Correlation Dynamics by Two-Dimensional Electronic Spectroscopy. Chem Asian J 2019; 14:3992-4000. [PMID: 31595651 DOI: 10.1002/asia.201900994] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2019] [Indexed: 11/07/2022]
Abstract
The frequency fluctuation correlation function (FFCF) measures the spectral diffusion of a state's transition while the frequency fluctuation cross-correlation function (FXCF) measures the correlation dynamics between the transitions of two separate states. These quantities contain a wealth of information on how the chromophores or excitonic states interact and couple with its environment and with each other. We summarize the experimental implementations and theoretical considerations of using two-dimensional electronic spectroscopy to characterize FFCFs and FXCFs. Applications can be found in systems such as the chlorophyll pigment molecules in light-harvesting complexes and CdSe nanomaterials.
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Affiliation(s)
- Thanh Nhut Do
- Disivion of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21, Nanyang Link, 637371, Singapore
| | - M Faisal Khyasudeen
- Disivion of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21, Nanyang Link, 637371, Singapore.,Department of Chemistry, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia
| | - Paweł J Nowakowski
- Disivion of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21, Nanyang Link, 637371, Singapore
| | - Zhengyang Zhang
- Disivion of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21, Nanyang Link, 637371, Singapore
| | - Howe-Siang Tan
- Disivion of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21, Nanyang Link, 637371, Singapore
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14
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Song Y, Schubert A, Maret E, Burdick RK, Dunietz BD, Geva E, Ogilvie JP. Vibronic structure of photosynthetic pigments probed by polarized two-dimensional electronic spectroscopy and ab initio calculations. Chem Sci 2019; 10:8143-8153. [PMID: 31857881 PMCID: PMC6836992 DOI: 10.1039/c9sc02329a] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2019] [Accepted: 07/02/2019] [Indexed: 12/29/2022] Open
Abstract
Bacteriochlorophyll a (Bchl a) and chlorophyll a (Chl a) play important roles as light absorbers in photosynthetic antennae and participate in the initial charge-separation steps in photosynthetic reaction centers. Despite decades of study, questions remain about the interplay of electronic and vibrational states within the Q-band and its effect on the photoexcited dynamics. Here we report results of polarized two-dimensional electronic spectroscopic measurements, performed on penta-coordinated Bchl a and Chl a and their interpretation based on state-of-the-art time-dependent density functional theory calculations and vibrational mode analysis for spectral shapes. We find that the Q-band of Bchl a is comprised of two independent bands, that are assigned following the Gouterman model to Q x and Q y states with orthogonal transition dipole moments. However, we measure the angle to be ∼75°, a finding that is confirmed by ab initio calculations. The internal conversion rate constant from Q x to Q y is found to be 11 ps-1. Unlike Bchl a, the Q-band of Chl a contains three distinct peaks with different polarizations. Ab initio calculations trace these features back to a spectral overlap between two electronic transitions and their vibrational replicas. The smaller energy gap and the mixing of vibronic states result in faster internal conversion rate constants of 38-50 ps-1. We analyze the spectra of penta-coordinated Bchl a and Chl a to highlight the interplay between low-lying vibronic states and their relationship to photoinduced relaxation. Our findings shed new light on the photoexcited dynamics in photosynthetic systems where these chromophores are primary pigments.
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Affiliation(s)
- Yin Song
- Department of Physics , University of Michigan , 450 Church St , Ann Arbor , MI 48109 , USA .
| | - Alexander Schubert
- Department of Chemistry , University of Michigan , 930 N University Ave , Ann Arbor , MI 48109 , USA
- Department of Chemistry and Biochemistry , Kent State University , 1175 Risman Drive , Kent , OH 44242 , USA
| | - Elizabeth Maret
- Applied Physics Program , University of Michigan , 450 Church St , Ann Arbor , MI 48109 , USA
| | - Ryan K Burdick
- Department of Chemistry , University of Michigan , 930 N University Ave , Ann Arbor , MI 48109 , USA
| | - Barry D Dunietz
- Department of Chemistry and Biochemistry , Kent State University , 1175 Risman Drive , Kent , OH 44242 , USA
| | - Eitan Geva
- Department of Chemistry , University of Michigan , 930 N University Ave , Ann Arbor , MI 48109 , USA
| | - Jennifer P Ogilvie
- Department of Physics , University of Michigan , 450 Church St , Ann Arbor , MI 48109 , USA .
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15
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Yakovlev AG, Taisova AS, Shuvalov VA, Fetisova ZG. Ultrafast excited-state dynamics in chlorosomes isolated from the photosynthetic filamentous green bacterium Chloroflexus aurantiacus. PHYSIOLOGIA PLANTARUM 2019; 166:12-21. [PMID: 30499123 DOI: 10.1111/ppl.12887] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2018] [Revised: 11/24/2018] [Accepted: 11/26/2018] [Indexed: 06/09/2023]
Abstract
Bacteriochlorophyll (BChl) c pigments in the aggregated state are responsible for efficient light harvesting in chlorosomes of the filamentous anoxygenic photosynthetic bacterium, Chloroflexus (Cfx.) aurantiacus. Absorption of light creates excited states in the BChl c aggregates. After subpicosecond intrachlorosomal energy transfer, redistribution and relaxation, the excitation is transferred to the BChl a complexes and further to reaction centers on the picosecond time scale. In this work, the femtosecond excited state dynamics within BChl c oligomers of isolated Cfx. aurantiacus chlorosomes was studied by double difference pump-probe spectroscopy at room temperature. Difference (Alight - Adark ) spectra corresponding to excitation at 725 nm (blue side of the BChl c absorption band) were compared with those corresponding to excitation at 750 nm (red side of the BChl c absorption band). A very fast (time constant 70 ± 10 fs) rise kinetic component was found in the stimulated emission (SE) upon excitation at 725 nm. This component was absent at 750-nm excitation. These data were explained by the dynamical red shift of the SE due to excited state relaxation. The nature and mechanisms of the ultrafast excited state dynamics in chlorosomal BChl c aggregates are discussed.
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Affiliation(s)
- Andrei G Yakovlev
- Lomonosov Moscow State University, Belozersky Institute of Physico-Chemical Biology, 119991, Moscow, Russian Federation
| | - Alexandra S Taisova
- Lomonosov Moscow State University, Belozersky Institute of Physico-Chemical Biology, 119991, Moscow, Russian Federation
| | - Vladimir A Shuvalov
- Lomonosov Moscow State University, Belozersky Institute of Physico-Chemical Biology, 119991, Moscow, Russian Federation
- Institute of Basic Biological Problems, Russian Academy of Sciences, 142290, Moscow, Russian Federation
| | - Zoya G Fetisova
- Lomonosov Moscow State University, Belozersky Institute of Physico-Chemical Biology, 119991, Moscow, Russian Federation
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16
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Khyasudeen MF, Nowakowski PJ, Tan HS. Measuring the Ultrafast Correlation Dynamics between the Qx and Qy Bands in Chlorophyll Molecules. J Phys Chem B 2019; 123:1359-1364. [DOI: 10.1021/acs.jpcb.9b00099] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Affiliation(s)
- M. Faisal Khyasudeen
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore 637371, Singapore
- Department of Chemistry, Faculty of Science, University of Malaya, 50603 Kuala Lumpur, Malaysia
| | - Paweł J. Nowakowski
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore 637371, Singapore
| | - Howe-Siang Tan
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore 637371, Singapore
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17
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Meneghin E, Leonardo C, Volpato A, Bolzonello L, Collini E. Mechanistic insight into internal conversion process within Q-bands of chlorophyll a. Sci Rep 2017; 7:11389. [PMID: 28900171 PMCID: PMC5595816 DOI: 10.1038/s41598-017-11621-2] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2017] [Accepted: 08/29/2017] [Indexed: 11/08/2022] Open
Abstract
The non-radiative relaxation of the excitation energy from higher energy states to the lowest energy state in chlorophylls is a crucial preliminary step for the process of photosynthesis. Despite the continuous theoretical and experimental efforts to clarify the ultrafast dynamics of this process, it still represents the object of an intense investigation because the ultrafast timescale and the congestion of the involved states makes its characterization particularly challenging. Here we exploit 2D electronic spectroscopy and recently developed data analysis tools to provide more detailed insights into the mechanism of internal conversion within the Q-bands of chlorophyll a. The measurements confirmed the timescale of the overall internal conversion rate (170 fs) and captured the presence of a previously unidentified ultrafast (40 fs) intermediate step, involving vibronic levels of the lowest excited state.
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Affiliation(s)
- Elena Meneghin
- Department of Chemical Sciences, University of Padova, Padova, Italy
| | - Cristina Leonardo
- Department of Chemical Sciences, University of Padova, Padova, Italy
| | - Andrea Volpato
- Department of Chemical Sciences, University of Padova, Padova, Italy
| | - Luca Bolzonello
- Department of Chemical Sciences, University of Padova, Padova, Italy
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18
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Zhou Q, Wei Y, Liu X, Chen L, Zhou X, Liu S. Photochemical Reaction Between 1,2-Naphthoquinone and Adenine in Binary Water-Acetonitrile Solutions. Photochem Photobiol 2017; 94:61-68. [DOI: 10.1111/php.12808] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2017] [Accepted: 06/19/2017] [Indexed: 11/30/2022]
Affiliation(s)
- Qiaohui Zhou
- Hefei National Laboratory for Physical Sciences at the Microscale; Department of Chemical Physics; University of Science and Technology of China; Hefei Anhui China
| | - Yaxiong Wei
- Hefei National Laboratory for Physical Sciences at the Microscale; Department of Chemical Physics; University of Science and Technology of China; Hefei Anhui China
| | - Xiang Liu
- Hefei National Laboratory for Physical Sciences at the Microscale; Department of Chemical Physics; University of Science and Technology of China; Hefei Anhui China
| | - Lin Chen
- Hefei National Laboratory for Physical Sciences at the Microscale; Department of Chemical Physics; University of Science and Technology of China; Hefei Anhui China
| | - Xiaoguo Zhou
- Hefei National Laboratory for Physical Sciences at the Microscale; Department of Chemical Physics; University of Science and Technology of China; Hefei Anhui China
- Synergetic Innovation Center of Quantum Information & Quantum Physics; University of Science and Technology of China; Hefei Anhui China
| | - Shilin Liu
- Hefei National Laboratory for Physical Sciences at the Microscale; Department of Chemical Physics; University of Science and Technology of China; Hefei Anhui China
- Synergetic Innovation Center of Quantum Information & Quantum Physics; University of Science and Technology of China; Hefei Anhui China
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19
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Zheng F, Fernandez-Alberti S, Tretiak S, Zhao Y. Photoinduced Intra- and Intermolecular Energy Transfer in Chlorophyll a Dimer. J Phys Chem B 2017; 121:5331-5339. [DOI: 10.1021/acs.jpcb.7b02021] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Fulu Zheng
- Division
of Materials Science, Nanyang Technological University, Singapore 639798, Singapore
| | | | | | - Yang Zhao
- Division
of Materials Science, Nanyang Technological University, Singapore 639798, Singapore
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20
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Chu TS, Liu BT. Establishing new mechanisms with triplet and singlet excited-state hydrogen bonding roles in photoinduced liquid dynamics. INT REV PHYS CHEM 2016. [DOI: 10.1080/0144235x.2016.1148450] [Citation(s) in RCA: 49] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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21
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Shenai PM, Fernandez-Alberti S, Bricker WP, Tretiak S, Zhao Y. Internal Conversion and Vibrational Energy Redistribution in Chlorophyll A. J Phys Chem B 2015; 120:49-58. [DOI: 10.1021/acs.jpcb.5b09548] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Prathamesh M. Shenai
- Division
of Materials Science, Nanyang Technological University, Singapore, Singapore 639798
| | | | - William P. Bricker
- Department
of Energy, Environmental and Chemical Engineering, Washington University, Saint Louis, Missouri 63130, United States
| | - Sergei Tretiak
- Theoretical
Division, Center for Nonlinear Studies (CNLS), and Center for Integrated
Nanotechnologies (CINT), Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - Yang Zhao
- Division
of Materials Science, Nanyang Technological University, Singapore, Singapore 639798
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22
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Baeten Y, Fron E, Ruzié C, Geerts YH, Van Der Auweraer M. Investigation of the Qx-QyEquilibrium in a Metal-Free Phthalocyanine. Chemphyschem 2015; 16:3992-6. [DOI: 10.1002/cphc.201500386] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2015] [Revised: 08/17/2015] [Indexed: 11/11/2022]
Affiliation(s)
- Yannick Baeten
- Department of Chemistry; Division of Molecular Imaging and Photonics; KULeuven, Celestijnenlaan; 200F Heverlee Belgium
| | - Eduard Fron
- Department of Chemistry; Division of Molecular Imaging and Photonics; KULeuven, Celestijnenlaan; 200F Heverlee Belgium
| | - Christian Ruzié
- Department of Chemistry; Laboratory of Polymer Chemistry; Université Libre de Bruxelles, Chimie des Polymères; CP 206/01 Campus de la Plaine Brussels Belgium
| | - Yves Henri Geerts
- Department of Chemistry; Laboratory of Polymer Chemistry; Université Libre de Bruxelles, Chimie des Polymères; CP 206/01 Campus de la Plaine Brussels Belgium
| | - Mark Van Der Auweraer
- Department of Chemistry; Division of Molecular Imaging and Photonics; KULeuven, Celestijnenlaan; 200F Heverlee Belgium
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23
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Bricker WP, Shenai PM, Ghosh A, Liu Z, Enriquez MGM, Lambrev PH, Tan HS, Lo CS, Tretiak S, Fernandez-Alberti S, Zhao Y. Non-radiative relaxation of photoexcited chlorophylls: theoretical and experimental study. Sci Rep 2015; 5:13625. [PMID: 26346438 PMCID: PMC4561917 DOI: 10.1038/srep13625] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2015] [Accepted: 07/31/2015] [Indexed: 11/10/2022] Open
Abstract
Nonradiative relaxation of high-energy excited states to the lowest excited state in chlorophylls marks the first step in the process of photosynthesis. We perform ultrafast transient absorption spectroscopy measurements, that reveal this internal conversion dynamics to be slightly slower in chlorophyll B than in chlorophyll A. Modeling this process with non-adiabatic excited state molecular dynamics simulations uncovers a critical role played by the different side groups in the two molecules in governing the intramolecular redistribution of excited state wavefunction, leading, in turn, to different time-scales. Even given smaller electron-vibrational couplings compared to common organic conjugated chromophores, these molecules are able to efficiently dissipate about 1 eV of electronic energy into heat on the timescale of around 200 fs. This is achieved via selective participation of specific atomic groups and complex global migration of the wavefunction from the outer to inner ring, which may have important implications for biological light-harvesting function.
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Affiliation(s)
- William P Bricker
- Department of Energy, Environmental and Chemical Engineering, Washington University, Saint Louis, Missouri 63130, USA
| | - Prathamesh M Shenai
- Division of Materials Science, Nanyang Technological University, Singapore 639798
| | - Avishek Ghosh
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, Singapore 637371
| | - Zhengtang Liu
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, Singapore 637371
| | - Miriam Grace M Enriquez
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, Singapore 637371
| | - Petar H Lambrev
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, Singapore 637371.,Biological Research Center, Hungarian Academy of Sciences, 6726 Szeged, Temesvari krt. 62, Hungary
| | - Howe-Siang Tan
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, Singapore 637371
| | - Cynthia S Lo
- Department of Energy, Environmental and Chemical Engineering, Washington University, Saint Louis, Missouri 63130, USA
| | - Sergei Tretiak
- Theoretical Division, Center for Nonlinear Studies (CNLS), and Center for Integrated Nanotechnologies (CINT), Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | | | - Yang Zhao
- Division of Materials Science, Nanyang Technological University, Singapore 639798
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24
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Reimers JR, Cai ZL, Kobayashi R, Rätsep M, Freiberg A, Krausz E. Assignment of the Q-bands of the chlorophylls: coherence loss via Qx - Qy mixing. Sci Rep 2013; 3:2761. [PMID: 24067303 PMCID: PMC3783888 DOI: 10.1038/srep02761] [Citation(s) in RCA: 94] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2013] [Accepted: 09/03/2013] [Indexed: 01/12/2023] Open
Abstract
We provide a new and definitive spectral assignment for the absorption, emission, high-resolution fluorescence excitation, linear dichroism, and/or magnetic circular dichroism spectra of 32 chlorophyllides in various environments. This encompases all data used to justify previous assignments and provides a simple interpretation of unexplained complex decoherence phenomena associated with Qx → Qy relaxation. Whilst most chlorophylls conform to the Gouterman model and display two independent transitions Qx (S2) and Qy (S1), strong vibronic coupling inseparably mixes these states in chlorophyll-a. This spreads x-polarized absorption intensity over the entireQ-band system to influence all exciton-transport, relaxation and coherence properties of chlorophyll-based photosystems. The fraction of the total absorption intensity attributed to Qx ranges between 7% and 33%, depending on chlorophyllide and coordination, and is between 10% and 25% for chlorophyll-a. CAM-B3LYP density-functional-theory calculations of the band origins, relative intensities, vibrational Huang-Rhys factors, and vibronic coupling strengths fully support this new assignment.
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25
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Iqbal Z, Ogunsipe A, Nyokong T, Lyubimtsev A, Hanack M, Ziegler T. Photophysics and photochemistry of octaglucosylated zinc phthalocyanine derivatives. J PORPHYR PHTHALOCYA 2012. [DOI: 10.1142/s1088424612500630] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The ground state electronic absorption spectra, photophysics and photochemistry of amphiphilic octaglucosylated zinc phthalocyanines containing oxygen or sulfur bridges are presented. Triplet quantum yield values for the two dyes (in DMF and DMSO) vary between 0.71 and 0.84, while singlet quantum yield values lie between 0.63 and 0.75. Fluorescence lifetimes were determined experimentally by time correlated single photon counting and semi-empirically by fluorescence quenching techniques; and values from both methods were within the same range. Kinetic data were obtained for the quenching of the triplet state of the phthalocyanines by ground state molecular oxygen; the bimolecular collisional quenching rate constant range between 2.35 × 108 and 1.13 × 109 M-1.s-1. These values suggest that triplet states of the dyes are effectively quenched by ground molecular oxygen.
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Affiliation(s)
- Zafar Iqbal
- Department of Chemistry, Rhodes University, Grahamstown 6140, South Africa
| | - Abimbola Ogunsipe
- Department of Chemistry, Rhodes University, Grahamstown 6140, South Africa
- School of Science & Technology, National Open University of Nigeria,14/16 Ahmadu Bello Way, P.M.B. 80067, Victoria Island, Lagos, Nigeria
| | - Tebello Nyokong
- Department of Chemistry, Rhodes University, Grahamstown 6140, South Africa
| | - Alexey Lyubimtsev
- Institut fuer Organische Chemie, Auf der Morgenstelle 18, 72076 Tuebingen, Germany
| | - Michael Hanack
- Institut fuer Organische Chemie, Auf der Morgenstelle 18, 72076 Tuebingen, Germany
| | - Thomas Ziegler
- Institut fuer Organische Chemie, Auf der Morgenstelle 18, 72076 Tuebingen, Germany
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26
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Liu JF. Theoretical reconsideration on the hydrogen bonding and coordination interactions of chlorophyll a in aqueous solution. J PORPHYR PHTHALOCYA 2012. [DOI: 10.1142/s1088424611003148] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
In the present work, explicit water molecule and solvent-field effects on the absorption spectrum of chlorophyll a have been studied using time-dependent density functional theory (TDDFT) method. Calculated results show that the one complex and two water coordinated complexes formed by concerted coordination and hydrogen-bonding interactions would be the most preferable conformations of chlorophyll a in aqueous surroundings. Moreover, four obvious absorption bands are assigned by comparing the theoretically simulated absorption spectra with the experimental ones. The theoretical study shows that the explicit water molecule interactions slightly influence the first absorption band. However, the water coordination and hydrogen-bonding interactions can significantly affect the second absorption band which has a strong red-shift. The solvent-field effect due to the polarity of water on absorptions in Q-bands is relatively smaller than that on absorptions in B-bands. As a consequence, our theoretical study on the absorption spectra in the 350–400 nm region presents that the absorption strength in this region was influenced by the explicit coordination and hydrogen bonding interactions from water molecules, significantly.
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Affiliation(s)
- Ji-Feng Liu
- Supercomputing Center, Computer Network Information Center, Chinese Academy of Sciences, Beijing 100080, P.R. China
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27
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DONG LIQING, NIU KAI, CONG SHULIN. THEORETICAL INVESTIGATION OF ULTRAFAST DYNAMICS OF THE RHODAMINE-700 MOLECULE IN SOLVENTS. JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY 2011. [DOI: 10.1142/s0219633607003490] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The density matrix theory is used to calculate the fluorescence depletion spectra and the internal conversion (IC) times of rhodamine-700 (R-700) in methanol, ethanol, and DMSO solvents. The calculated IC times from Sx to S1 states of R-700 in methanol, ethanol, and DMSO solvents are about 20, 33, and 70 fs, respectively. The times of the excited solvation processes for R-700 in methanol, ethanol, and DMSO solvents are about 8.0, 7.0, and 3.0 ps, respectively.
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Affiliation(s)
- LI-QING DONG
- Department of Physics, Dalian University of Technology, Dalian 116024, People's Republic of China
| | - KAI NIU
- Department of Physics, Dalian University of Technology, Dalian 116024, People's Republic of China
| | - SHU-LIN CONG
- Department of Physics, Dalian University of Technology, Dalian 116024, People's Republic of China
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28
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Zhou P, Song P, Liu J, Han K, He G. Experimental and theoretical study of the rotational reorientation dynamics of 7-animocoumarin derivatives in polar solvents: hydrogen-bonding effects. Phys Chem Chem Phys 2009; 11:9440-9. [DOI: 10.1039/b910043a] [Citation(s) in RCA: 60] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
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29
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Liu Y, Ding J, Shi D, Sun J. Time-Dependent Density Functional Theory Study on Electronically Excited States of Coumarin 102 Chromophore in Aniline Solvent: Reconsideration of the Electronic Excited-State Hydrogen-Bonding Dynamics. J Phys Chem A 2008; 112:6244-8. [DOI: 10.1021/jp8022919] [Citation(s) in RCA: 100] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Yufang Liu
- Henan Normal University, Xinxiang 453007, China
| | - Junxia Ding
- Henan Normal University, Xinxiang 453007, China
| | - Deheng Shi
- Henan Normal University, Xinxiang 453007, China
| | - Jinfeng Sun
- Henan Normal University, Xinxiang 453007, China
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30
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Niu K, Dong LQ, Cong SL. Internal Conversion Process of Chlorophyll a in Solvents in Femtosecond Pump-Probe Laser Fields. CHINESE J CHEM PHYS 2008. [DOI: 10.1088/1674-0068/21/03/211-216] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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31
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Zhou P, Song P, Liu J, Shi Y, Han K, He G. Rotational Reorientation Dynamics of Oxazine 750 in Polar Solvents. J Phys Chem A 2008; 112:3646-55. [DOI: 10.1021/jp7120998] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Panwang Zhou
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, Liaoning, China, and Graduate School of Chinese Academy of Sciences, Beijing 100049, China
| | - Peng Song
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, Liaoning, China, and Graduate School of Chinese Academy of Sciences, Beijing 100049, China
| | - Jianyong Liu
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, Liaoning, China, and Graduate School of Chinese Academy of Sciences, Beijing 100049, China
| | - Ying Shi
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, Liaoning, China, and Graduate School of Chinese Academy of Sciences, Beijing 100049, China
| | - Keli Han
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, Liaoning, China, and Graduate School of Chinese Academy of Sciences, Beijing 100049, China
| | - Guozhong He
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, Liaoning, China, and Graduate School of Chinese Academy of Sciences, Beijing 100049, China
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32
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Niu K, Dong LQ, Cong SL. Theoretical description of femtosecond fluorescence depletion spectrum of molecules in solution. J Chem Phys 2007; 127:124502. [PMID: 17902916 DOI: 10.1063/1.2767620] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023] Open
Abstract
A theoretical model used for calculating the fluorescence depletion spectrum (FDS) of molecules in liquids induced by femtosecond pump-probe laser pulses is proposed based on the reduced density matrix theory. The FDS intensity is obtained by calculating the stimulated emission of the excited electronic state. As an application of the theoretical model, the FDS of oxazine 750 (OX-750) molecule in acetone solution is calculated. The simulated FDS agrees with the experimental result of Liu et al. [J. Y. Liu et al., J. Phys. Chem. A 107, 10857 (2003)]. The calculated vibrational relaxation rate is 2.5 ps(-1) for the OX-750 molecule. Vibrational population dynamics and wave packet evolution in the excited state are described in detail. The effect of the probe pulse parameter on the FDS is also discussed.
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Affiliation(s)
- Kai Niu
- Department of Physics, Dalian University of Technology, Dalian 116024, People's Republic of China
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33
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Zhao GJ, Liu JY, Zhou LC, Han KL. Site-selective photoinduced electron transfer from alcoholic solvents to the chromophore facilitated by hydrogen bonding: a new fluorescence quenching mechanism. J Phys Chem B 2007; 111:8940-5. [PMID: 17616225 DOI: 10.1021/jp0734530] [Citation(s) in RCA: 573] [Impact Index Per Article: 33.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
Solute-solvent intermolecular photoinduced electron transfer (ET) reaction was proposed to account for the drastic fluorescence quenching behaviors of oxazine 750 (OX750) chromophore in protic alcoholic solvents. According to our theoretical calculations for the hydrogen-bonded OX750-(alcohol)(n) complexes using the time-dependent density functional theory (TDDFT) method, we demonstrated that the ET reaction takes place from the alcoholic solvents to the chromophore and the intermolecular ET passing through the site-specific intermolecular hydrogen bonds exhibits an unambiguous site selectivity. In our motivated experiments of femtosecond time-resolved stimulated emission pumping fluorescence depletion spectroscopy (FS TR SEP FD), it could be noted that the ultrafast ET reaction takes place as fast as 200 fs. This ultrafast intermolecular photoinduced ET is much faster than the diffusive solvation process, and even significantly faster than the intramolecular vibrational redistribution (IVR) process of the OX750 chromophore. Therefore, the ultrafast intermolecular ET should be coupled with the hydrogen-bonding dynamics occurring in the sub-picosecond time domain. We theoretically demonstrated for the first time that the selected hydrogen bonds are transiently strengthened in the excited states for facilitating the ultrafast solute-solvent intermolecular ET reaction.
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Affiliation(s)
- Guang-Jiu Zhao
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, Liaoning, China
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Zhao GJ, Han KL. Ultrafast Hydrogen Bond Strengthening of the Photoexcited Fluorenone in Alcohols for Facilitating the Fluorescence Quenching. J Phys Chem A 2007; 111:9218-23. [PMID: 17608458 DOI: 10.1021/jp0719659] [Citation(s) in RCA: 332] [Impact Index Per Article: 19.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The time-dependent density functional theory (TDDFT) method was performed to investigate the excited-state hydrogen-bonding dynamics of fluorenone (FN) in hydrogen donating methanol (MeOH) solvent. The infrared spectra of the hydrogen-bonded FN-MeOH complex in both the ground state and the electronically excited states are calculated using the TDDFT method, since the ultrafast hydrogen-bonding dynamics can be investigated by monitoring the vibrational absorption spectra of some hydrogen-bonded groups in different electronic states. We demonstrated that the intermolecular hydrogen bond C=O...H-O between fluorenone and methanol molecules is significantly strengthened in the electronically excited-state upon photoexcitation of the hydrogen-bonded FM-MeOH complex. The hydrogen bond strengthening in electronically excited states can be used to explain well all the spectral features of fluorenone chromophore in alcoholic solvents. Furthermore, the radiationless deactivation via internal conversion (IC) can be facilitated by the hydrogen bond strengthening in the excited state. At the same time, quantum yields of the excited-state deactivation via fluorescence are correspondingly decreased. Therefore, the total fluorescence of fluorenone in polar protic solvents can be drastically quenched by hydrogen bonding.
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Affiliation(s)
- Guang-Jiu Zhao
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, Liaoning, China
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Dong LQ, Niu K, Cong SL. Theoretical analysis of internal conversion pathways and vibrational relaxation process of chlorophyll-a in ethyl ether solvent. Chem Phys Lett 2007. [DOI: 10.1016/j.cplett.2007.04.021] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Zhou LC, Liu JY, Zhao GJ, Shi Y, Peng XJ, Han KL. The ultrafast dynamics of near-infrared heptamethine cyanine dye in alcoholic and aprotic solvents. Chem Phys 2007. [DOI: 10.1016/j.chemphys.2007.01.019] [Citation(s) in RCA: 57] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Dong LQ, Niu K, Cong SL. Theoretical study of vibrational relaxation and internal conversion dynamics of chlorophyll-a in ethyl acetate solvent in femtosecond laser fields. Chem Phys Lett 2006. [DOI: 10.1016/j.cplett.2006.10.040] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Dobkowski J, Lobko Y, Gawinkowski S, Waluk J. Energy relaxation paths in matrix-isolated excited molecules: Comparison of porphycene with dibenzoporphycenes. Chem Phys Lett 2005. [DOI: 10.1016/j.cplett.2005.09.043] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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