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Georges T, Chèvre R, Cousin SF, Gervais C, Thureau P, Mollica G, Azaïs T. 43Ca MAS-DNP NMR of Frozen Solutions for the Investigation of Calcium Ion Complexation. ACS OMEGA 2024; 9:4881-4891. [PMID: 38313477 PMCID: PMC10831850 DOI: 10.1021/acsomega.3c08292] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Revised: 12/11/2023] [Accepted: 12/26/2023] [Indexed: 02/06/2024]
Abstract
Calcium ion complexation in aqueous solutions is of paramount importance in biology as it is related to cell signaling, muscle contraction, or biomineralization. However, Ca2+-complexes are dynamic soluble entities challenging to describe at the molecular level. Nuclear magnetic resonance appears as a method of choice to probe Ca2+-complexes. However, 43Ca NMR exhibits severe limitations arising from the low natural abundance coupled to the low gyromagnetic ratio and the quadrupolar nature of 43Ca, which overall make it a very unreceptive nucleus. Here, we show that 43Ca dynamic nuclear polarization (DNP) NMR of 43Ca-labeled frozen solutions is an efficient approach to enhance the NMR receptivity of 43Ca and to obtain structural insights about calcium ions complexed with representative ligands including water molecules, ethylenediaminetetraacetic acid (EDTA), and l-aspartic acid (l-Asp). In these conditions and in combination with numerical simulations and calculations, we show that 43Ca nuclei belonging to Ca2+ complexed to the investigated ligands exhibit rather low quadrupolar couplings (with CQ typically ranging from 0.6 to 1 MHz) due to high symmetrical environments and potential residual dynamics in vitrified solutions at a temperature of 100 K. As a consequence, when 1H→43Ca cross-polarization (CP) is used to observe 43Ca central transition, "high-power" νRF(43Ca) conditions, typically used to detect spin 1/2 nuclei, provide ∼120 times larger sensitivity than "low-power" conditions usually employed for detection of quadrupolar nuclei. These "high-power" CPMAS conditions allow two-dimensional (2D) 1H-43Ca HetCor spectra to be readily recorded, highlighting various Ca2+-ligand interactions in solution. This significant increase in 43Ca NMR sensitivity results from the combination of distinct advantages: (i) an efficient 1H-mediated polarization transfer from DNP, resembling the case of low-natural-abundance spin 1/2 nuclei, (ii) a reduced dynamics, allowing the use of CP as a sensitivity enhancement technique, and (iii) the presence of a relatively highly symmetrical Ca environment, which, combined to residual dynamics, leads to the averaging of the quadrupolar interaction and hence to efficient high-power CP conditions. Interestingly, these results indicate that the use of high-power CP conditions is an effective way of selecting symmetrical and/or dynamic 43Ca environments of calcium-containing frozen solution, capable of filtering out more rigid and/or anisotropic 43Ca sites characterized by larger quadrupolar constants. This approach could open the way to the atomic-level investigation of calcium environments in more complex, heterogeneous frozen solutions, such as those encountered at the early stages of calcium phosphate or calcium carbonate biomineralization events.
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Affiliation(s)
- Tristan Georges
- Sorbonne
Université, CNRS, Laboratoire de Chimie de la Matière
Condensée de Paris (LCMCP), 4 Place Jussieu, 75005 Paris, France
| | - Romain Chèvre
- Aix
Marseille Univ, CNRS, ICR, 13397 Marseille, France
| | | | - Christel Gervais
- Sorbonne
Université, CNRS, Laboratoire de Chimie de la Matière
Condensée de Paris (LCMCP), 4 Place Jussieu, 75005 Paris, France
| | | | | | - Thierry Azaïs
- Sorbonne
Université, CNRS, Laboratoire de Chimie de la Matière
Condensée de Paris (LCMCP), 4 Place Jussieu, 75005 Paris, France
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2
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Laurencin D, Li Y, Duer MJ, Iuga D, Gervais C, Bonhomme C. A 43 Ca nuclear magnetic resonance perspective on octacalcium phosphate and its hybrid derivatives. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2021; 59:1048-1061. [PMID: 33729624 DOI: 10.1002/mrc.5149] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2021] [Revised: 03/01/2021] [Accepted: 03/08/2021] [Indexed: 06/12/2023]
Abstract
43 Ca nuclear magnetic resonance (NMR) spectroscopy has been extensively applied to the detailed study of octacalcium phosphate (OCP), Ca8 (HPO4 )2 (PO4 )4 .5H2 O, and hybrid derivatives involving intercalated metabolic acids (viz., citrate, succinate, formate, and adipate). Such phases are of importance in the development of a better understanding of bone structure. High-resolution 43 Ca magic angle spinning (MAS) experiments, including double-rotation (DOR) 43 Ca NMR, as well as 43 Ca{1 H} rotational echo DOR (REDOR) and 31 P{43 Ca} REAPDOR NMR spectra, were recorded on a 43 Ca-labeled OCP phase at very high magnetic field (20 T), and complemented by ab initio calculations of NMR parameters using the Gauge-Including Projector Augmented Wave-density functional theory (GIPAW-DFT) method. This enabled a partial assignment of the eight inequivalent Ca2+ sites of OCP. Natural-abundance 43 Ca MAS NMR spectra were then recorded for the hybrid organic-inorganic derivatives, revealing changes in the 43 Ca lineshape. In the case of the citrate derivative, these could be interpreted on the basis of computational models of the structure. Overall, this study highlights the advantages of combining high-resolution 43 Ca NMR experiments and computational modeling for studying complex hybrid biomaterials.
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Affiliation(s)
| | - Yang Li
- Department of Chemistry, University of Cambridge, Cambridge, UK
| | - Melinda J Duer
- Department of Chemistry, University of Cambridge, Cambridge, UK
| | - Dinu Iuga
- Department of Physics, University of Warwick, Coventry, UK
| | - Christel Gervais
- LCMCP-Chemistry of Condensed Matter Laboratory of Paris, Sorbonne University, Paris, France
| | - Christian Bonhomme
- LCMCP-Chemistry of Condensed Matter Laboratory of Paris, Sorbonne University, Paris, France
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3
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Smith ME. Recent progress in solid-state nuclear magnetic resonance of half-integer spin low-γ quadrupolar nuclei applied to inorganic materials. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2021; 59:864-907. [PMID: 33207003 DOI: 10.1002/mrc.5116] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2020] [Revised: 11/12/2020] [Accepted: 11/13/2020] [Indexed: 06/11/2023]
Abstract
An overview is presented of recent progress in the solid-state nuclear magnetic resonance (NMR) observation of low-γ nuclei, with a focus on applications to inorganic materials. The technological and methodological advances in the last 20 years, which have underpinned the increased accessibility of low-γ nuclei for study by solid-state NMR techniques, are summarised, including improvements in hardware, pulse sequences and associated computational methods (e.g., first principles calculations and spectral simulation). Some of the key initial observations from inorganic materials of these nuclei are highlighted along with some recent (most within the last 10 years) illustrations of their application to such materials. A summary of other recent reviews of the study of low-γ nuclei by solid-state NMR is provided so that a comprehensive understanding of what has been achieved to date is available.
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Affiliation(s)
- Mark E Smith
- Vice-Chancellor and President's Office and Department of Chemistry, University of Southampton, Southampton, UK
- Department of Chemistry, Lancaster University, Bailrigg, Lancaster, UK
- Department of Physics, University of Warwick, Coventry, UK
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4
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Leroy C, Bonhomme-Coury L, Gervais C, Tielens F, Babonneau F, Daudon M, Bazin D, Letavernier E, Laurencin D, Iuga D, Hanna J, Smith M, Bonhomme C. A novel multinuclear solid-state NMR approach for the characterization of kidney stones. MAGNETIC RESONANCE (GOTTINGEN, GERMANY) 2021; 2:653-671. [PMID: 37905220 PMCID: PMC10539836 DOI: 10.5194/mr-2-653-2021] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2021] [Accepted: 06/15/2021] [Indexed: 11/01/2023]
Abstract
The spectroscopic study of pathological calcifications (including kidney stones) is extremely rich and helps to improve the understanding of the physical and chemical processes associated with their formation. While Fourier transform infrared (FTIR) imaging and optical/electron microscopies are routine techniques in hospitals, there has been a dearth of solid-state NMR studies introduced into this area of medical research, probably due to the scarcity of this analytical technique in hospital facilities. This work introduces effective multinuclear and multidimensional solid-state NMR methodologies to study the complex chemical and structural properties characterizing kidney stone composition. As a basis for comparison, three hydrates (n = 1 , 2 and 3) of calcium oxalate are examined along with nine representative kidney stones. The multinuclear magic angle spinning (MAS) NMR approach adopted investigates the 1 H , 13 C , 31 P and 31 P nuclei, with the 1 H and 13 C MAS NMR data able to be readily deconvoluted into the constituent elements associated with the different oxalates and organics present. For the first time, the full interpretation of highly resolved 1 H NMR spectra is presented for the three hydrates, based on the structure and local dynamics. The corresponding 31 P MAS NMR data indicates the presence of low-level inorganic phosphate species; however, the complexity of these data make the precise identification of the phases difficult to assign. This work provides physicians, urologists and nephrologists with additional avenues of spectroscopic investigation to interrogate this complex medical dilemma that requires real, multitechnique approaches to generate effective outcomes.
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Affiliation(s)
- César Leroy
- Laboratoire Chimie de la Matière Condensée de Paris, LCMCP, Sorbonne Université, CNRS, 75005 Paris, France
- Institut Charles Gerhardt Montpellier, CNRS, ENSCM, Université de Montpellier, Montpellier, France
| | - Laure Bonhomme-Coury
- Laboratoire Chimie de la Matière Condensée de Paris, LCMCP, Sorbonne Université, CNRS, 75005 Paris, France
| | - Christel Gervais
- Laboratoire Chimie de la Matière Condensée de Paris, LCMCP, Sorbonne Université, CNRS, 75005 Paris, France
| | - Frederik Tielens
- Laboratoire Chimie de la Matière Condensée de Paris, LCMCP, Sorbonne Université, CNRS, 75005 Paris, France
- General Chemistry (ALGC) – Materials Modelling Group, Vrije
Universiteit Brussel (Free University Brussels – VUB), Pleinlaan 2, 1050
Brussels, Belgium
| | - Florence Babonneau
- Laboratoire Chimie de la Matière Condensée de Paris, LCMCP, Sorbonne Université, CNRS, 75005 Paris, France
| | - Michel Daudon
- AP-HP, Hôpital Tenon, Explorations Fonctionnelles
Multidisciplinaires et INSERM UMRS 1155, Sorbonne Université, Hôpital Tenon, Paris, France
| | - Dominique Bazin
- Institut de Chimie Physique, UMR CNRS 8000, Bâtiment 350,
Université Paris Saclay, 91405 Orsay CEDEX, France
- Laboratoire de Physique des Solides, UMR CNRS 8502, Bâtiment 510, Université Paris-Sud, 91405 Orsay CEDEX, France
| | - Emmanuel Letavernier
- AP-HP, Hôpital Tenon, Explorations Fonctionnelles
Multidisciplinaires et INSERM UMRS 1155, Sorbonne Université, Hôpital Tenon, Paris, France
| | - Danielle Laurencin
- Institut Charles Gerhardt Montpellier, CNRS, ENSCM, Université de Montpellier, Montpellier, France
| | - Dinu Iuga
- Department of Physics, University of Warwick, Gibbet Hill Road,
Coventry CV4 7AL, United Kingdom
| | - John V. Hanna
- Department of Physics, University of Warwick, Gibbet Hill Road,
Coventry CV4 7AL, United Kingdom
| | - Mark E. Smith
- Department of Chemistry, University of Southampton, Southampton SO17 1BJ, United Kingdom
| | - Christian Bonhomme
- Laboratoire Chimie de la Matière Condensée de Paris, LCMCP, Sorbonne Université, CNRS, 75005 Paris, France
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5
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Bai S, Quinn CM, Holmes ST, Dybowski C. High-resolution 13 C and 43 Ca solid-state NMR and computational studies of the ethylene glycol solvate of atorvastatin calcium. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2020; 58:1010-1017. [PMID: 31469449 DOI: 10.1002/mrc.4937] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2019] [Revised: 08/19/2019] [Accepted: 08/20/2019] [Indexed: 06/10/2023]
Abstract
We report 43 Ca and 13 C solid-state nuclear magnetic resonance (NMR) spectroscopic studies of the ethylene glycol solvate of atorvastatin calcium. The 13 C and 43 Ca chemical shift and 43 Ca quadrupolar coupling tensor parameters are reported. The results are interpreted in terms of the reported X-ray diffraction crystal structure of the solvate and are compared with the NMR parameters of atorvastatin calcium trihydrate, the active pharmaceutical ingredient in Lipitor®. Hartree-Fock and density functional theory calculations of the NMR parameters based on a cluster model derived from the optimized X-ray diffraction crystal structure of the ethylene glycol solvate of atorvastatin calcium are in reasonable agreement with the experimental 43 Ca and 13 C NMR measurables.
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Affiliation(s)
- Shi Bai
- Department of Chemistry and Biochemistry, University of Delaware, Newark, DE, USA
| | - Caitlin M Quinn
- Department of Chemistry and Biochemistry, University of Delaware, Newark, DE, USA
| | - Sean T Holmes
- Department of Chemistry and Biochemistry, University of Delaware, Newark, DE, USA
| | - Cecil Dybowski
- Department of Chemistry and Biochemistry, University of Delaware, Newark, DE, USA
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6
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Gervais C, Bonhomme C, Laurencin D. Recent directions in the solid-state NMR study of synthetic and natural calcium phosphates. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2020; 107:101663. [PMID: 32325374 DOI: 10.1016/j.ssnmr.2020.101663] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2020] [Revised: 03/29/2020] [Accepted: 04/02/2020] [Indexed: 06/11/2023]
Abstract
Materials containing a calcium phosphate component have been the subject of much interest to NMR spectroscopists, especially in view of understanding the structure and properties of mineralized tissues like bone and teeth, and of developing synthetic biomaterials for bone regeneration. Here, we present a selection of recent developments in their structural characterization using advanced solid state NMR experiments, highlighting the level of insight which can now be accessed.
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Affiliation(s)
- Christel Gervais
- Laboratoire de Chimie de la Matière Condensée de Paris (LCMCP), UMR 7574, Sorbonne Université, CNRS, 75005, Paris, France
| | - Christian Bonhomme
- Laboratoire de Chimie de la Matière Condensée de Paris (LCMCP), UMR 7574, Sorbonne Université, CNRS, 75005, Paris, France
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7
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Mayen L, Jensen ND, Desbord M, Laurencin D, Gervais C, Bonhomme C, Smith ME, Porcher F, Elkaim E, Charvillat C, Gras P, Rey C, Soulié J, Combes C. Advances in the synthesis and structure of α-canaphite: a multitool and multiscale study. CrystEngComm 2020. [DOI: 10.1039/d0ce00132e] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Pure α-canaphite is synthesized and thoroughly characterized; its hydrated layered structure is now fully solved by combining experimental and modeling data.
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Affiliation(s)
- Laëtitia Mayen
- CIRIMAT
- Université de Toulouse
- CNRS
- Toulouse INP – ENSIACET
- Toulouse
| | | | | | | | - Christel Gervais
- Sorbonne Université
- CNRS
- Laboratoire de Chimie de la Matière Condensée de Paris
- UMR 7574
- Paris
| | - Christian Bonhomme
- Sorbonne Université
- CNRS
- Laboratoire de Chimie de la Matière Condensée de Paris
- UMR 7574
- Paris
| | - Mark E. Smith
- Vice-Chancellor's Office
- Highfield Campus
- University of Southampton
- Southampton
- UK
| | | | - Erik Elkaim
- Synchrotron Soleil
- L'Orme les Merisiers
- Gif-sur-Yvette
- France
| | | | - Pierre Gras
- CIRIMAT
- Université de Toulouse
- CNRS
- Toulouse INP – ENSIACET
- Toulouse
| | - Christian Rey
- CIRIMAT
- Université de Toulouse
- CNRS
- Toulouse INP – ENSIACET
- Toulouse
| | - Jérémy Soulié
- CIRIMAT
- Université de Toulouse
- CNRS
- Toulouse INP – ENSIACET
- Toulouse
| | - Christèle Combes
- CIRIMAT
- Université de Toulouse
- CNRS
- Toulouse INP – ENSIACET
- Toulouse
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8
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Holmes ST, Wang WD, Hou G, Dybowski C, Wang W, Bai S. A new NMR crystallographic approach to reveal the calcium local structure of atorvastatin calcium. Phys Chem Chem Phys 2019; 21:6319-6326. [DOI: 10.1039/c8cp07673a] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
We combine experimental and computational determination of 43Ca solid-state NMR parameters (chemical shift tensors, quadrupolar coupling tensors, and Euler angles) to constrain the structure of the local calcium–ligand coordination environment.
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Affiliation(s)
- Sean T. Holmes
- Department of Chemistry and Biochemistry
- University of Delaware
- Newark
- Delaware
- USA
| | - Wei D. Wang
- State Key Laboratory of Applied Organic Chemistry
- Lanzhou
- China
| | - Guangjin Hou
- Department of Chemistry and Biochemistry
- University of Delaware
- Newark
- Delaware
- USA
| | - Cecil Dybowski
- Department of Chemistry and Biochemistry
- University of Delaware
- Newark
- Delaware
- USA
| | - Wei Wang
- State Key Laboratory of Applied Organic Chemistry
- Lanzhou
- China
| | - Shi Bai
- Department of Chemistry and Biochemistry
- University of Delaware
- Newark
- Delaware
- USA
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9
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Bonhomme C, Wang X, Hung I, Gan Z, Gervais C, Sassoye C, Rimsza J, Du J, Smith ME, Hanna JV, Sarda S, Gras P, Combes C, Laurencin D. Pushing the limits of sensitivity and resolution for natural abundance 43Ca NMR using ultra-high magnetic field (35.2 T). Chem Commun (Camb) 2018; 54:9591-9594. [PMID: 30094425 DOI: 10.1039/c8cc05193c] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
Natural abundance 43Ca solid state NMR experiments are reported for the first time at ultra-high magnetic field (35.2 T) on a series of Ca-(pyro)phosphate and Ca-oxalate materials, which are of biological relevance in relation to biomineralization processes and the formation of pathological calcifications. The significant gain in both sensitivity and resolution at 35.2 T leads to unprecedented insight into the structure of both crystalline and amorphous phases.
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Affiliation(s)
- Christian Bonhomme
- Sorbonne Université, CNRS, Collège de France, Laboratoire de Chimie de la Matière Condensée de Paris, LCMCP, F-75005 Paris, France.
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10
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Andreev AS, Bulina NV, Chaikina MV, Prosanov IY, Terskikh VV, Lapina OB. Solid-state NMR and computational insights into the crystal structure of silicocarnotite-based bioceramic materials synthesized mechanochemically. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2017; 84:151-157. [PMID: 28258809 DOI: 10.1016/j.ssnmr.2017.02.005] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2016] [Revised: 01/15/2017] [Accepted: 02/14/2017] [Indexed: 06/06/2023]
Abstract
In this work, we report the results of a detailed structural study of a promising bioceramic material silicocarnotite Ca5(PO4)2SiO4 (SC) synthesized from mechanochemically treated nanosized silicon-substituted hydroxyapatite by annealing at 1000°C. This novel synthetic approach represents an attractive and efficient route towards large-scale manufacturing of the silicocarnotite-based bioceramics. A combination of solid-state nuclear magnetic resonance (NMR), powder X-ray crystallography and density function theory (DFT) calculations has been implemented to characterize the phase composition of the prepared composite materials and to gain insight into the crystal structure of silicocarnotite. The phase composition analysis based on the multinuclear solid-state NMR has been found in agreement with X-ray powder diffraction indicating the minority phases of CaO (5-6wt%) and residual silicon-apatite (7-8wt%), while the rest of the material being a fairly crystalline silicocarnotite phase (86-88wt%). A combination of computational (CASTEP) and experimental methods was used to address the anionic site disorder in the silicocarnotite crystal structure. Distorted [OPO3] pyramids have appeared as an important structural motif in the SC crystal structure. The ratio between regular [PO4] and distorted [OPO3] tetrahedra is found between 2:1 and 3:1 based on XRD experiments and CASTEP calculations. The natural abundance 43Ca magic angle spinning NMR spectra of silicocarnotite are reported for the first time.
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Affiliation(s)
- A S Andreev
- Boreskov Institute of Catalysis SB RAS, pr. Lavrentieva 5, 630090 Novosibirsk, Russian Federation; Novosibirsk State University, Pirogova st. 2, 630090 Novosibirsk, Russian Federation.
| | - N V Bulina
- Institute of Solid State Chemistry and Mechanochemistry SB RAS, Kutateladze st. 18, 630128 Novosibirsk, Russian Federation
| | - M V Chaikina
- Institute of Solid State Chemistry and Mechanochemistry SB RAS, Kutateladze st. 18, 630128 Novosibirsk, Russian Federation
| | - I Yu Prosanov
- Institute of Solid State Chemistry and Mechanochemistry SB RAS, Kutateladze st. 18, 630128 Novosibirsk, Russian Federation
| | - V V Terskikh
- Department of Chemistry, University of Ottawa, Ottawa, ON, Canada K1N 6N5
| | - O B Lapina
- Boreskov Institute of Catalysis SB RAS, pr. Lavrentieva 5, 630090 Novosibirsk, Russian Federation; Novosibirsk State University, Pirogova st. 2, 630090 Novosibirsk, Russian Federation
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11
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Dabachi J, Body M, Galven C, Boucher F, Legein C. Preparation-Dependent Composition and O/F Ordering in NbO 2F and TaO 2F. Inorg Chem 2017; 56:5219-5232. [PMID: 28398062 DOI: 10.1021/acs.inorgchem.7b00355] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Through an analysis combining powder XRD, TGA, and 19F and 1H solid-state NMR, it is confirmed for NbO2F and shown for TaO2F that both contain hydroxyl defects and metal vacancies when prepared by aqueous solution synthesis. The formulations M1-x□xO2-5x(OH,F)1+5x of both the samples are determined. The effects of the usually applied thermal treatments are examined. Obtaining pure NbO2F and TaO2F from these samples, that is, fully removing metal vacancies and hydroxide, while avoiding the formation of M2O5, is not that easy. Since thermal treatments result in dehydroxylation and defluorination, it requires, at least, a larger amount of fluorine than metal initially, which may not be the case. We also confirm that the solid-state synthesis is an efficient method to avoid metal vacancies and hydroxyl defects in NbO2F and then apply it to the synthesis of TaO2F. The local structure of NbO2F and TaO2F is poorly described by an ideal cubic ReO3-type model with O and F randomly distributed over the available anion sites. Since O/F ordering was previously highlighted, NbO2F and TaO2F cubic 3 × 3 × 3 supercells featuring -M-O-M-O-M-F- chains along ⟨100⟩ have been built and geometry optimized. These optimized supercells lead to more realistic structures than the previously proposed models, that is, really disordered structures with angularly and radially distorted MX6 octahedra as expected in disordered compounds. Moreover, the structural modeling of NbO2F and TaO2F by these geometry-optimized supercells is supported by the computed 19F and 93Nb NMR parameters, which give very good agreement with the experimental ones.
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Affiliation(s)
- Jamal Dabachi
- Université Bretagne Loire, Université du Maine , UMR CNRS 6283, Institut des Molécules et des Matériaux du Mans (IMMM), Avenue Olivier Messiaen, 72085 Le Mans Cedex 9, France
| | - Monique Body
- Université Bretagne Loire, Université du Maine , UMR CNRS 6283, Institut des Molécules et des Matériaux du Mans (IMMM), Avenue Olivier Messiaen, 72085 Le Mans Cedex 9, France
| | - Cyrille Galven
- Université Bretagne Loire, Université du Maine , UMR CNRS 6283, Institut des Molécules et des Matériaux du Mans (IMMM), Avenue Olivier Messiaen, 72085 Le Mans Cedex 9, France
| | - Florent Boucher
- Institut des Matériaux Jean Rouxel (IMN), Université de Nantes, CNRS , 2 Rue de la Houssinière, BP 32229, 44322 Nantes Cedex 3, France
| | - Christophe Legein
- Université Bretagne Loire, Université du Maine , UMR CNRS 6283, Institut des Molécules et des Matériaux du Mans (IMMM), Avenue Olivier Messiaen, 72085 Le Mans Cedex 9, France
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12
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Gervais C, Jones C, Bonhomme C, Laurencin D. Insight into the local environment of magnesium and calcium in low-coordination-number organo-complexes using 25Mg and 43Ca solid-state NMR: a DFT study. Acta Crystallogr C 2017; 73:208-218. [PMID: 28257015 DOI: 10.1107/s205322961601929x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2016] [Accepted: 12/02/2016] [Indexed: 12/13/2022] Open
Abstract
With the increasing number of organocalcium and organomagnesium complexes under development, there is a real need to be able to characterize in detail their local environment in order to fully rationalize their reactivity. For crystalline structures, in cases when diffraction techniques are insufficient, additional local spectroscopies like 25Mg and 43Ca solid-state NMR may provide valuable information to help fully establish the local environment of the metal ions. In this current work, a prospective DFT investigation on crystalline magnesium and calcium complexes involving low-coordination numbers and N-bearing organic ligands was carried out, in which the 25Mg and 43Ca NMR parameters [isotropic chemical shift, chemical shift anisotropy (CSA) and quadrupolar parameters] were calculated for each structure. The analysis of the calculated parameters in relation to the local environment of the metal ions revealed that they are highly sensitive to very small changes in geometry/distances, and hence that they could be used to assist in the refinement of crystal structures. Moreover, such calculations provide a guideline as to how the NMR measurements will need to be performed, revealing that these will be very challenging.
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Affiliation(s)
- Christel Gervais
- Sorbonne Universités, UPMC - Paris 06, Collège de France, UMR CNRS 7574, Laboratoire de Chimie de la Matière Condensée de Paris, 4 place Jussieu, 75252 Paris Cedex 05, France
| | - Cameron Jones
- School of Chemistry, Monash University, PO Box 23, Victoria 3800, Australia
| | - Christian Bonhomme
- Sorbonne Universités, UPMC - Paris 06, Collège de France, UMR CNRS 7574, Laboratoire de Chimie de la Matière Condensée de Paris, 4 place Jussieu, 75252 Paris Cedex 05, France
| | - Danielle Laurencin
- Institut Charles Gerhardt de Montpellier, UMR5253, CNRS UM ENSCM, CC1701, Pl. E. Bataillon, 34095 Montpellier Cedex 05, France
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13
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Holmes ST, Bai S, Iuliucci RJ, Mueller KT, Dybowski C. Calculations of solid‐state
43
Ca NMR parameters: A comparison of periodic and cluster approaches and an evaluation of DFT functionals. J Comput Chem 2017; 38:949-956. [DOI: 10.1002/jcc.24763] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2016] [Revised: 11/29/2016] [Accepted: 01/30/2017] [Indexed: 01/18/2023]
Affiliation(s)
- Sean T. Holmes
- Department of Chemistry and BiochemistryUniversity of DelawareNewark Delaware19716
| | - Shi Bai
- Department of Chemistry and BiochemistryUniversity of DelawareNewark Delaware19716
| | - Robbie J. Iuliucci
- Department of ChemistryWashington and Jefferson CollegeWashington Pennsylvania15301
| | - Karl T. Mueller
- Department of ChemistryPennsylvania State University, University Park Pennsylvania16802
- Physical and Computational Sciences Directorate, Pacific Northwest National LaboratoryRichland Washington99352
| | - Cecil Dybowski
- Department of Chemistry and BiochemistryUniversity of DelawareNewark Delaware19716
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Interfacial Ca 2+ environments in nanocrystalline apatites revealed by dynamic nuclear polarization enhanced 43Ca NMR spectroscopy. Nat Commun 2017; 8:14104. [PMID: 28128197 PMCID: PMC5290151 DOI: 10.1038/ncomms14104] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2016] [Accepted: 11/30/2016] [Indexed: 01/13/2023] Open
Abstract
The interfaces within bones, teeth and other hybrid biomaterials are of paramount importance but remain particularly difficult to characterize at the molecular level because both sensitive and selective techniques are mandatory. Here, it is demonstrated that unprecedented insights into calcium environments, for example the differentiation of surface and core species of hydroxyapatite nanoparticles, can be obtained using solid-state NMR, when combined with dynamic nuclear polarization. Although calcium represents an ideal NMR target here (and de facto for a large variety of calcium-derived materials), its stable NMR-active isotope, calcium-43, is a highly unreceptive probe. Using the sensitivity gains from dynamic nuclear polarization, not only could calcium-43 NMR spectra be obtained easily, but natural isotopic abundance 2D correlation experiments could be recorded for calcium-43 in short experimental time. This opens perspectives for the detailed study of interfaces in nanostructured materials of the highest biological interest as well as calcium-based nanosystems in general.
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Intraspecific Differences in Biogeochemical Responses to Thermal Change in the Coccolithophore Emiliania huxleyi. PLoS One 2016; 11:e0162313. [PMID: 27584038 PMCID: PMC5008731 DOI: 10.1371/journal.pone.0162313] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2016] [Accepted: 08/19/2016] [Indexed: 12/03/2022] Open
Abstract
The species concept in marine phytoplankton is defined based on genomic, morphological, and functional properties. Reports of intraspecific diversity are widespread across major phytoplankton groups but the impacts of this variation on ecological and biogeochemical processes are often overlooked. Intraspecific diversity is well known within coccolithophores, which play an important role in the marine carbon cycle via production of particulate inorganic carbon. In this study, we investigated strain-specific responses to temperature in terms of morphology, carbon production, and carbonate mineralogy using a combination of microscopy, elemental analysis, flow cytometry, and nuclear magnetic resonance. Two strains of the cosmopolitan coccolithophore E. huxleyi isolated from different regions (subtropical, CCMP371; temperate, CCMP3266) were cultured under a range of temperature conditions (10°C, 15°C, and 20°C) using batch cultures and sampled during both exponential and stationary growth. Results for both strains showed that growth rates decreased at lower temperatures while coccosphere size increased. Between 15°C and 20°C, both strains produced similar amounts of total carbon, but differed in allocation of that carbon between particulate inorganic carbon (PIC) and particulate organic carbon (POC), though temperature effects were not detected. Between 10°C and 20°C, temperature effects on daily production of PIC and POC, as well as the cellular quota of POC were detected in CCMP3266. Strain-specific differences in coccolith shedding rates were found during exponential growth. In addition, daily shedding rates were negatively related to temperature in CCMP371 but not in CCMP3266. Despite differences in rates of particulate inorganic carbon production, both strains were found to produce coccoliths composed entirely of pure calcite, as established by solid-state 13C and 43Ca NMR and X-ray diffraction measurements. These results highlight the limitations of the species concept and the need for a trait-based system to better quantify diversity within marine phytoplankton communities.
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Gras P, Baker A, Combes C, Rey C, Sarda S, Wright AJ, Smith ME, Hanna JV, Gervais C, Laurencin D, Bonhomme C. From crystalline to amorphous calcium pyrophosphates: A solid state Nuclear Magnetic Resonance perspective. Acta Biomater 2016; 31:348-357. [PMID: 26476341 DOI: 10.1016/j.actbio.2015.10.016] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2015] [Revised: 09/09/2015] [Accepted: 10/12/2015] [Indexed: 12/14/2022]
Abstract
Hydrated calcium pyrophosphates (CPP, Ca2P2O7·nH2O) are a fundamental family of materials among osteoarticular pathologic calcifications. In this contribution, a comprehensive multinuclear NMR (Nuclear Magnetic Resonance) study of four crystalline and two amorphous phases of this family is presented. (1)H, (31)P and (43)Ca MAS (Magic Angle Spinning) NMR spectra were recorded, leading to informative fingerprints characterizing each compound. In particular, different (1)H and (43)Ca solid state NMR signatures were observed for the amorphous phases, depending on the synthetic procedure used. The NMR parameters of the crystalline phases were determined using the GIPAW (Gauge Including Projected Augmented Wave) DFT approach, based on first-principles calculations. In some cases, relaxed structures were found to improve the agreement between experimental and calculated values, demonstrating the importance of proton positions and pyrophosphate local geometry in this particular NMR crystallography approach. Such calculations serve as a basis for the future ab initio modeling of the amorphous CPP phases. STATEMENT OF SIGNIFICANCE The general concept of NMR crystallography is applied to the detailed study of calcium pyrophosphates (CPP), whether hydrated or not, and whether crystalline or amorphous. CPP are a fundamental family of materials among osteoarticular pathologic calcifications. Their prevalence increases with age, impacting on 17.5% of the population after the age of 80. They are frequently involved or associated with acute articular arthritis such as pseudogout. Current treatments are mainly directed at relieving the symptoms of joint inflammation but not at inhibiting CPP formation nor at dissolving these crystals. The combination of advanced NMR techniques, modeling and DFT based calculation of NMR parameters allows new original insights in the detailed structural description of this important class of biomaterials.
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Affiliation(s)
- Pierre Gras
- CIRIMAT, INPT-CNRS-UPS, Université de Toulouse, ENSIACET, Toulouse, France
| | - Annabelle Baker
- School of Chemistry, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK
| | - Christèle Combes
- CIRIMAT, INPT-CNRS-UPS, Université de Toulouse, ENSIACET, Toulouse, France
| | - Christian Rey
- CIRIMAT, INPT-CNRS-UPS, Université de Toulouse, ENSIACET, Toulouse, France
| | - Stéphanie Sarda
- CIRIMAT, INPT-CNRS-UPS, Université de Toulouse, Université Paul Sabatier, Toulouse, France
| | - Adrian J Wright
- School of Chemistry, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK
| | - Mark E Smith
- Vice-Chancellor's Office, University House, Lancaster University, Lancaster LA14YW, UK; Department of Physics, University of Warwick, Coventry CV4 7AL, UK
| | - John V Hanna
- Department of Physics, University of Warwick, Coventry CV4 7AL, UK
| | - Christel Gervais
- Sorbonne Universités, UPMC Univ Paris 06, CNRS, Collège de France, UMR 7574, Chimie de la Matière Condensée de Paris, 75005 Paris, France
| | - Danielle Laurencin
- Institut Charles Gerhardt de Montpellier, UMR 5253, CNRS-UM-ENSCM, Université de Montpellier, Montpellier, France
| | - Christian Bonhomme
- Sorbonne Universités, UPMC Univ Paris 06, CNRS, Collège de France, UMR 7574, Chimie de la Matière Condensée de Paris, 75005 Paris, France.
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17
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Kanwal N, Toms H, Hannon AC, Perras FA, Bryce DL, Karpukhina N, Abrahams I. Structure and solubility behaviour of zinc containing phosphate glasses. J Mater Chem B 2015; 3:8842-8855. [PMID: 32263478 DOI: 10.1039/c4tb01504e] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The structure of phosphate glasses of general composition 10Na2O : (20 + x/2)ZnO : (20 + x/2)CaO : (50 -x)P2O5 (0 ≤x≤ 20) has been investigated using IR spectroscopy, 1D 31P and 43Ca MAS Bloch decay, 31P-31P double quantum MAS-NMR and 43Ca and 67Zn static NMR techniques, as well as neutron diffraction analysis. Zinc is shown to aid glass formation in this system. Glass transition temperature and density increase with increasing cation : phosphate ratio. However, free volume calculations show structures becoming significantly more compact from x = 5 to x = 10. The structural data confirm depolymerisation of the glasses with increasing cation : phosphate ratio. Zinc oxide is found to act in a network forming role in the system, with 67Zn NMR and neutron diffraction analysis confirming zinc exhibits predominantly four-coordinate geometry. Solubility in deionised water and tris/HCl buffer solution is seen to decrease significantly with increasing x-value. This is discussed in terms of water ingress and the degree of structural openness, associated with increased cross-linking and a decrease in concentration of P-O-P linkages. pH measurements confirm invert phosphate compositions maintain physiological pH levels on immersion in water and buffer solutions for up to four weeks.
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Affiliation(s)
- N Kanwal
- Materials, Research Institute, School of Biological and Chemical Sciences, Queen Mary University of London, Mile End Road, London E1 4NS, UK.
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18
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Gambuzzi E, Pedone A, Menziani MC, Angeli F, Florian P, Charpentier T. Calcium environment in silicate and aluminosilicate glasses probed by ⁴³Ca MQMAS NMR experiments and MD-GIPAW calculations. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2015; 68-69:31-36. [PMID: 25912209 DOI: 10.1016/j.ssnmr.2015.04.003] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2014] [Revised: 03/31/2015] [Accepted: 04/02/2015] [Indexed: 06/04/2023]
Abstract
⁴³Ca MQMAS NMR spectra of three silica-based glasses in which Ca²⁺ ions play different structural roles have been collected and processed in order to extract the underlying NMR parameter distributions. The NMR parameters have been interpreted with the help of molecular dynamics simulations and DFT-GIPAW calculations. This synergetic experimental-computational approach has allowed us to investigate the Ca environment, to estimate Ca coordination numbers from MD-derived models, and to push further the discussion about ⁴³Ca NMR sensitivity to the first and second coordination spheres: ⁴³Ca δiso and Ca-O distance can be successfully correlated as a function of Ca coordination number.
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Affiliation(s)
- Elisa Gambuzzi
- Dipartimento di Scienze Chimiche e Geologiche, Università degli Studi di Modena e Reggio Emilia, Via G. Campi 183, 41125 Modena, Italy
| | - Alfonso Pedone
- Dipartimento di Scienze Chimiche e Geologiche, Università degli Studi di Modena e Reggio Emilia, Via G. Campi 183, 41125 Modena, Italy
| | - Maria Cristina Menziani
- Dipartimento di Scienze Chimiche e Geologiche, Università degli Studi di Modena e Reggio Emilia, Via G. Campi 183, 41125 Modena, Italy
| | - Frédéric Angeli
- CEA Marcoule, DEN, Laboratoire d׳étude du Comportement à Long Terme, 30207 Bagnols-sur-Cèze, France
| | - Pierre Florian
- CEMHTI-CNRS UPR3079, Conditions Extrêmes et Matériaux: Haute Température et Irradiation, Av. de la Recherche Scientifique, 45071 Orléans cedex 2, France
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19
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Burgess KMN, Bryce DL. On the crystal structure of the vaterite polymorph of CaCO3: a calcium-43 solid-state NMR and computational assessment. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2015; 65:75-83. [PMID: 25306191 DOI: 10.1016/j.ssnmr.2014.08.003] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2014] [Accepted: 08/29/2014] [Indexed: 06/04/2023]
Abstract
The vaterite polymorph of CaCO3 has puzzled crystallographers for decades in part due to difficulties in obtaining single crystals. The multiple proposed structures for the vaterite polymorph of CaCO3 are assessed using a combined (43)Ca solid-state nuclear magnetic resonance (SSNMR) spectroscopic and computational approach. A combination of improved experimental and computational methods, along with a calibrated chemical shift scale and (43)Ca nuclear quadrupole moment, allow for improved insights relative to our earlier work (Bryce et al., J. Am. Chem. Soc. 2008, 130, 9282). Here, we synthesize a (43)Ca isotopically-enriched sample of vaterite and perform high-resolution quadrupolar SSNMR experiments including magic-angle spinning (MAS), double-rotation (DOR), and multiple-quantum (MQ) MAS experiments at magnetic field strengths of 9.4 and 21.1T. We identify one crystallographically unique Ca(2+) site in vaterite with a slight distribution in both chemical shifts and quadrupolar parameters. Both the experimental (43)Ca electric field gradient tensor and the isotropic chemical shift for vaterite are compared to those calculated with the gauge-including projector-augmented-wave (GIPAW) DFT method in an attempt to identify the model that best represents the crystal structure of vaterite. Simulations of (43)Ca DOR and MAS NMR spectra based on the NMR parameters computed for a total of 18 structural models for vaterite allow us to distinguish between these models. Among these 18, the P3221 and C2 structures provide simulated spectra and diffractograms in best agreement with all experimental data.
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Affiliation(s)
- Kevin M N Burgess
- Department of Chemistry and Centre for Catalysis Research and Innovation, University of Ottawa, 10 Marie Curie Private, Ottawa, Ontario, Canada K1N 6N5
| | - David L Bryce
- Department of Chemistry and Centre for Catalysis Research and Innovation, University of Ottawa, 10 Marie Curie Private, Ottawa, Ontario, Canada K1N 6N5.
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20
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Bevilaqua RCA, Rigo VA, Veríssimo-Alves M, Miranda CR. NMR characterization of hydrocarbon adsorption on calcite surfaces: a first principles study. J Chem Phys 2014; 141:204705. [PMID: 25429955 DOI: 10.1063/1.4902251] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023] Open
Abstract
The electronic and coordination environment of minerals surfaces, as calcite, are very difficult to characterize experimentally. This is mainly due to the fact that there are relatively few spectroscopic techniques able to detect Ca(2+). Since calcite is a major constituent of sedimentary rocks in oil reservoir, a more detailed characterization of the interaction between hydrocarbon molecules and mineral surfaces is highly desirable. Here we perform a first principles study on the adsorption of hydrocarbon molecules on calcite surface (CaCO3 (101¯4)). The simulations were based on Density Functional Theory with Solid State Nuclear Magnetic Resonance (SS-NMR) calculations. The Gauge-Including Projector Augmented Wave method was used to compute mainly SS-NMR parameters for (43)Ca, (13)C, and (17)O in calcite surface. It was possible to assign the peaks in the theoretical NMR spectra for all structures studied. Besides showing different chemical shifts for atoms located on different environments (bulk and surface) for calcite, the results also display changes on the chemical shift, mainly for Ca sites, when the hydrocarbon molecules are present. Even though the interaction of the benzene molecule with the calcite surface is weak, there is a clearly distinguishable displacement of the signal of the Ca sites over which the hydrocarbon molecule is located. A similar effect is also observed for hexane adsorption. Through NMR spectroscopy, we show that aromatic and alkane hydrocarbon molecules adsorbed on carbonate surfaces can be differentiated.
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Affiliation(s)
- Rochele C A Bevilaqua
- Centro de Ciências Naturais e Humanas, Universidade Federal do ABC, UFABC, Santo André, SP, Brazil
| | - Vagner A Rigo
- Centro de Ciências Naturais e Humanas, Universidade Federal do ABC, UFABC, Santo André, SP, Brazil
| | - Marcos Veríssimo-Alves
- Centro de Ciências Naturais e Humanas, Universidade Federal do ABC, UFABC, Santo André, SP, Brazil
| | - Caetano R Miranda
- Centro de Ciências Naturais e Humanas, Universidade Federal do ABC, UFABC, Santo André, SP, Brazil
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21
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Berthomieu D, Gervais C, Renaudin G, Reinholdt M, Sene S, Smith ME, Bonhomme C, Laurencin D. Coordination Polymers Based on Alkylboronate Ligands: Synthesis, Characterization, and Computational Modelling. Eur J Inorg Chem 2014. [DOI: 10.1002/ejic.201402561] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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22
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Widdifield CM, Moudrakovski I, Bryce DL. Calcium-43 chemical shift and electric field gradient tensor interplay: a sensitive probe of structure, polymorphism, and hydration. Phys Chem Chem Phys 2014; 16:13340-59. [DOI: 10.1039/c4cp01180e] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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23
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Cation substitution in β-tricalcium phosphate investigated using multi-nuclear, solid-state NMR. J SOLID STATE CHEM 2014. [DOI: 10.1016/j.jssc.2013.10.026] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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24
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Burgess KMN, Xu Y, Leclerc MC, Bryce DL. Alkaline-Earth Metal Carboxylates Characterized by 43Ca and 87Sr Solid-State NMR: Impact of Metal-Amine Bonding. Inorg Chem 2013; 53:552-61. [DOI: 10.1021/ic402658d] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Kevin M. N. Burgess
- Department
of Chemistry and Centre for Catalysis Research and Innovation, University of Ottawa, 10 Marie Curie Private, Ottawa, Ontario, Canada K1N
6N5
| | - Yang Xu
- Department
of Chemistry and Centre for Catalysis Research and Innovation, University of Ottawa, 10 Marie Curie Private, Ottawa, Ontario, Canada K1N
6N5
| | - Matthew C. Leclerc
- Department
of Chemistry and Centre for Catalysis Research and Innovation, University of Ottawa, 10 Marie Curie Private, Ottawa, Ontario, Canada K1N
6N5
| | - David L. Bryce
- Department
of Chemistry and Centre for Catalysis Research and Innovation, University of Ottawa, 10 Marie Curie Private, Ottawa, Ontario, Canada K1N
6N5
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25
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Alderman OLG, Iuga D, Howes AP, Pike KJ, Holland D, Dupree R. Spectral assignments and NMR parameter-structure relationships in borates using high-resolution 11B NMR and density functional theory. Phys Chem Chem Phys 2013; 15:8208-21. [PMID: 23608768 DOI: 10.1039/c3cp50772f] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
High-resolution, solid-state (11)B NMR spectra have been obtained at high magnetic fields for a range of polycrystalline borates using double-rotation (DOR), multiple-quantum magic angle spinning and isotopic dilution. DOR linewidths can be less than 0.2 ppm in isotopically diluted samples, allowing highly accurate values for the isotropic chemical shift, δiso, and electric field gradient to be obtained. The experimental values are used as a test of density functional calculations using both projector augmented wave based CASTEP and WIEN2k. The CASTEP calculations of δiso are generally in very good agreement with experiment, having r.m.s. deviation 0.40 ppm. WIEN2k calculations of electric field gradient magnitude, CQ, and asymmetry, η, are also in excellent agreement with experiment, with r.m.s. deviations 0.038 MHz and 0.042 respectively. However, whilst CASTEP gives a similar deviation for η (0.043) it overestimates CQ by ∼15%. After scaling of the calculated electric field gradient by 0.842 the deviation in CQ is practically identical to that of the WIEN2k calculations. The spectral assignments that follow from the experimental and computational results allow identification of correlations between δiso and (a) the average B-O-B bond angle, θ[combining overline], for both three and four coordinated boron, giving δiso(B(III)) = (185.1 -θ[combining overline])/3.42 ppm and δiso(B(IV)) = (130.2 -θ[combining overline])/5.31 ppm; and (b) the ring-site T(3) unit trigonal planar angular deviation, Stri, giving δiso(T(3)(ring)) = (1.642 × 10(-2)-Stri)/(8.339 × 10(-4)) ppm.
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Colas H, Bonhomme-Coury L, Diogo CC, Tielens F, Babonneau F, Gervais C, Bazin D, Laurencin D, Smith ME, Hanna JV, Daudon M, Bonhomme C. Whewellite, CaC2O4⋅H2O: structural study by a combined NMR, crystallography and modelling approach. CrystEngComm 2013. [DOI: 10.1039/c3ce41201f] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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27
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Sene S, Bouchevreau B, Martineau C, Gervais C, Bonhomme C, Gaveau P, Mauri F, Bégu S, Mutin PH, Smith ME, Laurencin D. Structural study of calcium phosphonates: a combined synchrotron powder diffraction, solid-state NMR and first-principle calculations approach. CrystEngComm 2013. [DOI: 10.1039/c3ce40981c] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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28
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Laurencin D, Smith ME. Development of (43)Ca solid state NMR spectroscopy as a probe of local structure in inorganic and molecular materials. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2013; 68:1-40. [PMID: 23398971 DOI: 10.1016/j.pnmrs.2012.05.001] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2012] [Accepted: 05/10/2012] [Indexed: 06/01/2023]
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29
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Alvarez E, Marquez AG, Devic T, Steunou N, Serre C, Bonhomme C, Gervais C, Izquierdo-Barba I, Vallet-Regi M, Laurencin D, Mauri F, Horcajada P. A biocompatible calcium bisphosphonate coordination polymer: towards a metal-linker synergistic therapeutic effect? CrystEngComm 2013. [DOI: 10.1039/c3ce41346b] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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30
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Charpentier T, Menziani MC, Pedone A. Computational simulations of solid state NMR spectra: a new era in structure determination of oxide glasses. RSC Adv 2013. [DOI: 10.1039/c3ra40627j] [Citation(s) in RCA: 69] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023] Open
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31
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Boronate Ligands in Materials: Determining Their Local Environment by Using a Combination of IR/Solid-State NMR Spectroscopies and DFT Calculations. Chemistry 2012; 19:880-91. [DOI: 10.1002/chem.201203560] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2012] [Indexed: 11/07/2022]
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32
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Huang YC, Mou Y, Tsai TWT, Wu YJ, Lee HK, Huang SJ, Chan JCC. Calcium-43 NMR studies of polymorphic transition of calcite to aragonite. J Phys Chem B 2012; 116:14295-301. [PMID: 23163540 DOI: 10.1021/jp309923p] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Phase transformation between calcite and aragonite is an important issue in biomineralization. To shed more light on the mechanism of this process at the molecular level, we employ solid-state (43)Ca NMR to study the phase transformation from calcite to aragonite as regulated by magnesium ions, with (43)Ca enrichment at a level of 6%. Using the gas diffusion approach, the phase of Mg-calcite is formed initially and the system subsequently transforms to aragonite as the reaction time proceeds. Our (43)Ca solid-state NMR data support the dissolution-recrystallization mechanism for the calcite to aragonite transition. We find that the (43)Ca NMR parameters of Mg-calcite are very similar to those of pure calcite. Under the high-resolution condition provided by magic-angle spinning at 4 kHz, we can monitor the variation of the (43)Ca NMR parameters of the aragonite signals for the samples obtained at different reaction times. Our data suggest that in the presence of a significant amount of Mg(2+) ions, aragonite is the most stable polymorph of calcium carbonate. The initial precipitated crystallites of aragonite have spine-like morphology, for which the (43)Ca spin-lattice relaxation data indicate that the ions in the lattice have considerable motional dynamics. As the crystallinity of aragonite improves further, the (43)Ca T(1) parameter of the aragonite phase changes considerably and becomes very similar to that obtained for pure aragonite. For the first time, the difference in crystal morphologies and crystallinity of the aragonite phase has been traced down to the subtle difference in the motional dynamics at the molecular level.
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Affiliation(s)
- Yu-Chieh Huang
- Department of Chemistry, National Taiwan University, No. 1, Section 4, Roosevelt Road, Taipei 106, Taiwan
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Bonhomme C, Gervais C, Babonneau F, Coelho C, Pourpoint F, Azaïs T, Ashbrook SE, Griffin JM, Yates JR, Mauri F, Pickard CJ. First-principles calculation of NMR parameters using the gauge including projector augmented wave method: a chemist's point of view. Chem Rev 2012; 112:5733-79. [PMID: 23113537 DOI: 10.1021/cr300108a] [Citation(s) in RCA: 312] [Impact Index Per Article: 26.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Christian Bonhomme
- Laboratoire de Chimie de la Matière Condensée de Paris, Université Pierre et Marie Curie, CNRS UMR, Collège de France, France.
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Pavan B, Ceresoli D, Tecklenburg MMJ, Fornari M. First principles NMR study of fluorapatite under pressure. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2012; 45-46:59-65. [PMID: 22770669 PMCID: PMC3435879 DOI: 10.1016/j.ssnmr.2012.06.002] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2012] [Revised: 06/12/2012] [Accepted: 06/14/2012] [Indexed: 06/01/2023]
Abstract
NMR is the technique of election to probe the local properties of materials. Herein we present the results of density functional theory (DFT) ab initio calculations of the NMR parameters for fluorapatite (FAp), a calcium orthophosphate mineral belonging to the apatite family, by using the GIPAW method (Pickard and Mauri, 2001). Understanding the local effects of pressure on apatites is particularly relevant because of their important role in many solid state and biomedical applications. Apatites are open structures, which can undergo complex anisotropic deformations, and the response of NMR can elucidate the microscopic changes induced by an applied pressure. The computed NMR parameters proved to be in good agreement with the available experimental data. The structural evaluation of the material behavior under hydrostatic pressure (from -5 to +100 kbar) indicated a shrinkage of the diameter of the apatitic channel, and a strong correlation between NMR shielding and pressure, proving the sensitivity of this technique to even small changes in the chemical environment around the nuclei. This theoretical approach allows the exploration of all the different nuclei composing the material, thus providing a very useful guidance in the interpretation of experimental results, particularly valuable for the more challenging nuclei such as (43)Ca and (17)O.
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Affiliation(s)
- Barbara Pavan
- Science of Advanced Materials, Central Michigan University, Mt. Pleasant, MI 48859, USA.
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35
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Rollet AL, Allix M, Veron E, Deschamps M, Montouillout V, Suchomel MR, Suard E, Barre M, Ocaña M, Sadoc A, Boucher F, Bessada C, Massiot D, Fayon F. Synthesis and Structure Resolution of RbLaF4. Inorg Chem 2012; 51:2272-82. [DOI: 10.1021/ic202301e] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
| | - Mathieu Allix
- CEMHTI, CNRS UPR
3079, Orléans, France
- Université d’Orléans, Faculté des Sciences,
Orléans, France
| | - Emmanuel Veron
- CEMHTI, CNRS UPR
3079, Orléans, France
- Université d’Orléans, Faculté des Sciences,
Orléans, France
| | - Michael Deschamps
- CEMHTI, CNRS UPR
3079, Orléans, France
- Université d’Orléans, Faculté des Sciences,
Orléans, France
| | - Valérie Montouillout
- CEMHTI, CNRS UPR
3079, Orléans, France
- Université d’Orléans, Faculté des Sciences,
Orléans, France
| | - Matthew R. Suchomel
- Argonne National Laboratory, Advanced Photon Source, Argonne, Illinois
60439, United States
| | | | - Maud Barre
- Laboratoire des Oxydes et Fluorures, Université du Maine, CNRS UMR 6010, Le Mans,
France
| | - Manuel Ocaña
- Instituto de Ciencia de Materiales de Sevilla, CSIC-US, Sevilla, Spain
| | - Aymeric Sadoc
- Institut des Matériaux
Jean Rouxel (IMN), Université de Nantes, CNRS UMR 6502, Nantes, France
| | - Florent Boucher
- Institut des Matériaux
Jean Rouxel (IMN), Université de Nantes, CNRS UMR 6502, Nantes, France
| | - Catherine Bessada
- CEMHTI, CNRS UPR
3079, Orléans, France
- Université d’Orléans, Faculté des Sciences,
Orléans, France
| | - Dominique Massiot
- CEMHTI, CNRS UPR
3079, Orléans, France
- Université d’Orléans, Faculté des Sciences,
Orléans, France
| | - Franck Fayon
- CEMHTI, CNRS UPR
3079, Orléans, France
- Université d’Orléans, Faculté des Sciences,
Orléans, France
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36
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Martin RA, Twyman HL, Rees GJ, Barney ER, Moss RM, Smith JM, Hill RG, Cibin G, Charpentier T, Smith ME, Hanna JV, Newport RJ. An examination of the calcium and strontium site distribution in bioactive glasses through isomorphic neutron diffraction, X-ray diffraction, EXAFS and multinuclear solid state NMR. ACTA ACUST UNITED AC 2012. [DOI: 10.1039/c2jm33058j] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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37
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Esrafili MD. Intra- and inter-molecular interactions in salicylic acid — Theoretical calculations of 17O and 1H chemical shielding tensors and QTAIM analysis. CAN J CHEM 2011. [DOI: 10.1139/v11-105] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
A density functional theory (DFT) study was performed to examine intra- and inter-molecular hydrogen bond (HB) properties in crystalline salicylic acid (SA). BLYP, B3LYP, and M06 functionals with 6–311++G** basis set were employed to calculate NMR chemical shielding isotropy (σiso) and anisotropy (Δσ) at the sites of the 17O and 1H nuclei of SA. From this study, it appears that the intra- and inter-molecular O–H···O as well as C–H···O HBs around the SA molecule in the crystal lattice have a major influence on the chemical shielding tensors and more specifically on the carbonyl 17O isotropy value. The quantum theory of atoms in molecules (QTAIM) analysis was also employed to elucidate the interaction characteristics in SA H-bonded network. Based on QTAIM results, a partial covalent character is attributed to the intra- and inter-molecular O–H···O HBs in SA.
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Affiliation(s)
- Mehdi D. Esrafili
- Laboratory of Theoretical Chemistry, Department of Chemistry, University of Maragheh, Maragheh, Iran
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38
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MacDonald JL, Werner-Zwanziger U, Chen B, Zwanziger JW, Forgeron D. A 43Ca and 13C NMR study of the chemical interaction between poly(ethylene-vinyl acetate) and white cement during hydration. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2011; 40:78-83. [PMID: 21813268 DOI: 10.1016/j.ssnmr.2011.07.001] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2011] [Revised: 07/09/2011] [Accepted: 07/11/2011] [Indexed: 05/31/2023]
Abstract
(43)Ca and (13)C NMR methods were used to study the chemical interaction of poly(ethylene-vinyl acetate) (PEVAc) admixture in commercial-grade white cement. From (43)Ca NMR it is shown both that PEVAc induces modest changes in the hydrated cement structure, and that hydrated commercial cement is significantly more complex than models that have been used for its structure in past work. The (13)C NMR results show that the PEVAc hydrolysis occurs early in the cement hydration acceleration period, with a rate well-fit by an exponential decay using a time constant of 6±1 days.
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39
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Reinholdt M, Croissant J, Di Carlo L, Granier D, Gaveau P, Bégu S, Devoisselle JM, Mutin PH, Smith ME, Bonhomme C, Gervais C, van der Lee A, Laurencin D. Synthesis and Characterization of Crystalline Structures Based on Phenylboronate Ligands Bound to Alkaline Earth Cations. Inorg Chem 2011; 50:7802-10. [DOI: 10.1021/ic200961a] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Marc Reinholdt
- Institut Charles Gerhardt Montpellier ICGM, UMR 5253 CNRS-UM2-UM1-ENSCM, Pl. E. Bataillon, CC1701, 34095 Montpellier Cedex 5, France
| | - Jonas Croissant
- Institut Charles Gerhardt Montpellier ICGM, UMR 5253 CNRS-UM2-UM1-ENSCM, Pl. E. Bataillon, CC1701, 34095 Montpellier Cedex 5, France
| | - Lidia Di Carlo
- Institut Charles Gerhardt Montpellier ICGM, UMR 5253 CNRS-UM2-UM1-ENSCM, Pl. E. Bataillon, CC1701, 34095 Montpellier Cedex 5, France
| | - Dominique Granier
- Institut Charles Gerhardt Montpellier ICGM, UMR 5253 CNRS-UM2-UM1-ENSCM, Pl. E. Bataillon, CC1701, 34095 Montpellier Cedex 5, France
| | - Philippe Gaveau
- Institut Charles Gerhardt Montpellier ICGM, UMR 5253 CNRS-UM2-UM1-ENSCM, Pl. E. Bataillon, CC1701, 34095 Montpellier Cedex 5, France
| | - Sylvie Bégu
- Institut Charles Gerhardt Montpellier ICGM, UMR 5253 CNRS-UM2-UM1-ENSCM, Pl. E. Bataillon, CC1701, 34095 Montpellier Cedex 5, France
| | - Jean-Marie Devoisselle
- Institut Charles Gerhardt Montpellier ICGM, UMR 5253 CNRS-UM2-UM1-ENSCM, Pl. E. Bataillon, CC1701, 34095 Montpellier Cedex 5, France
| | - P. Hubert Mutin
- Institut Charles Gerhardt Montpellier ICGM, UMR 5253 CNRS-UM2-UM1-ENSCM, Pl. E. Bataillon, CC1701, 34095 Montpellier Cedex 5, France
| | - Mark E. Smith
- Department of Physics, University of Warwick, CV4 7AL Coventry, United Kingdom
| | - Christian Bonhomme
- LCMCP, UMR CNRS 7574, UPMC Université Paris 06, Collège de France, 11 place Marcelin Berthelot, 75231 Paris Cedex 05, France
| | - Christel Gervais
- LCMCP, UMR CNRS 7574, UPMC Université Paris 06, Collège de France, 11 place Marcelin Berthelot, 75231 Paris Cedex 05, France
| | - Arie van der Lee
- Institut Européen des Membranes, CNRS - UMR 5635, Université de Montpellier 2, CC 047, Pl. E. Bataillon, 34095 Montpellier Cedex 5, France
| | - Danielle Laurencin
- Institut Charles Gerhardt Montpellier ICGM, UMR 5253 CNRS-UM2-UM1-ENSCM, Pl. E. Bataillon, CC1701, 34095 Montpellier Cedex 5, France
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40
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Widdifield CM, Bryce DL. A multinuclear solid-state magnetic resonance and GIPAW DFT study of anhydrous calcium chloride and its hydrates. CAN J CHEM 2011. [DOI: 10.1139/v11-009] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
The group 2 metal halides and corresponding metal halide hydrates serve as useful model systems for understanding the relationship between the electric field gradient (EFG) and chemical shift (CS) tensors at the halogen nuclei and the local molecular and electronic structure. Here, we present a 35/37Cl and 43Ca solid-state nuclear magnetic resonance (SSNMR) study of CaCl2. The 35Cl nuclear quadrupole coupling constant, 8.82(8) MHz, and the isotropic chlorine CS, 105(8) ppm (with respect to dilute NaCl(aq)), are different from the values reported previously for this compound, as well as those reported for CaCl2·2H2O. Chlorine-35 SSNMR spectra are also presented for CaCl2·6H2O, and when taken in concert, the SSNMR observations for CaCl2, CaCl2·2H2O, and CaCl2·6H2O clearly demonstrate the sensitivity of the chlorine EFG and CS tensors to the local symmetry and to changes in the hydration state. For example, the value of δiso decreases with increasing hydration. Gauge-including projector-augmented wave (GIPAW) density functional theory (DFT) calculations are used to substantiate the experimental SSNMR findings, to rule out the presence of other hydrates in our samples, to refine the hydrogen positions in CaCl2·2H2O, and to explore the isostructural relationship between CaCl2 and CaBr2. Finally, the 43Ca CS tensor span is measured to be 31(5) ppm for anhydrous CaCl2, which represents only the fifth CS tensor span measurement for calcium.
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Affiliation(s)
- Cory M. Widdifield
- Department of Chemistry and Centre for Catalysis Research and Innovation, University of Ottawa, 10 Marie Curie Private, Ottawa, ON K1N 6N5, Canada
| | - David L. Bryce
- Department of Chemistry and Centre for Catalysis Research and Innovation, University of Ottawa, 10 Marie Curie Private, Ottawa, ON K1N 6N5, Canada
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41
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Charpentier T. The PAW/GIPAW approach for computing NMR parameters: a new dimension added to NMR study of solids. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2011; 40:1-20. [PMID: 21612895 DOI: 10.1016/j.ssnmr.2011.04.006] [Citation(s) in RCA: 235] [Impact Index Per Article: 18.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2011] [Revised: 04/24/2011] [Accepted: 04/25/2011] [Indexed: 05/18/2023]
Abstract
In 2001, Mauri and Pickard introduced the gauge including projected augmented wave (GIPAW) method that enabled for the first time the calculation of all-electron NMR parameters in solids, i.e. accounting for periodic boundary conditions. The GIPAW method roots in the plane wave pseudopotential formalism of the density functional theory (DFT), and avoids the use of the cluster approximation. This method has undoubtedly revitalized the interest in quantum chemical calculations in the solid-state NMR community. It has quickly evolved and improved so that the calculation of the key components of NMR interactions, namely the shielding and electric field gradient tensors, has now become a routine for most of the common nuclei studied in NMR. Availability of reliable implementations in several software packages (CASTEP, Quantum Espresso, PARATEC) make its usage more and more increasingly popular, maybe indispensable in near future for all material NMR studies. The majority of nuclei of the periodic table have already been investigated by GIPAW, and because of its high accuracy it is quickly becoming an essential tool for interpreting and understanding experimental NMR spectra, providing reliable assignments of the observed resonances to crystallographic sites or enabling a priori prediction of NMR data. The continuous increase of computing power makes ever larger (and thus more realistic) systems amenable to first-principles analysis. In the near future perspectives, as the incorporation of dynamical effects and/or disorder are still at their early developments, these areas will certainly be the prime target.
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Affiliation(s)
- Thibault Charpentier
- CEA, IRAMIS, SIS2M, Laboratoire de Structure et Dynamique par Résonance Magnétique, UMR CEA-CNRS 3299, F-91191 Gif-sur-Yvette cedex, France.
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42
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Laurencin D, Almora-Barrios N, de Leeuw NH, Gervais C, Bonhomme C, Mauri F, Chrzanowski W, Knowles JC, Newport RJ, Wong A, Gan Z, Smith ME. Magnesium incorporation into hydroxyapatite. Biomaterials 2011; 32:1826-37. [DOI: 10.1016/j.biomaterials.2010.11.017] [Citation(s) in RCA: 255] [Impact Index Per Article: 19.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2010] [Accepted: 11/01/2010] [Indexed: 11/26/2022]
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43
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Wong A, Aguiar PM, Charpentier T, Sakellariou D. A low-cost strategy for 43Ca solid-state NMR spectroscopy. Chem Sci 2011. [DOI: 10.1039/c0sc00609b] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
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44
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Sadoc A, Body M, Legein C, Biswal M, Fayon F, Rocquefelte X, Boucher F. NMR parameters in alkali, alkaline earth and rare earth fluorides from first principle calculations. Phys Chem Chem Phys 2011; 13:18539-50. [DOI: 10.1039/c1cp21253b] [Citation(s) in RCA: 100] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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45
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Bonhomme C, Gervais C, Coelho C, Pourpoint F, Azaïs T, Bonhomme-Coury L, Babonneau F, Jacob G, Ferrari M, Canet D, Yates JR, Pickard CJ, Joyce SA, Mauri F, Massiot D. New perspectives in the PAW/GIPAW approach: J(P-O-Si) coupling constants, antisymmetric parts of shift tensors and NQR predictions. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2010; 48 Suppl 1:S86-S102. [PMID: 20589728 DOI: 10.1002/mrc.2635] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
In 2001, Pickard and Mauri implemented the gauge including projected augmented wave (GIPAW) protocol for first-principles calculations of NMR parameters using periodic boundary conditions (chemical shift anisotropy and electric field gradient tensors). In this paper, three potentially interesting perspectives in connection with PAW/GIPAW in solid-state NMR and pure nuclear quadrupole resonance (NQR) are presented: (i) the calculation of J coupling tensors in inorganic solids; (ii) the calculation of the antisymmetric part of chemical shift tensors and (iii) the prediction of (14)N and (35)Cl pure NQR resonances including dynamics. We believe that these topics should open new insights in the combination of GIPAW, NMR/NQR crystallography, temperature effects and dynamics. Points (i), (ii) and (iii) will be illustrated by selected examples: (i) chemical shift tensors and heteronuclear (2)J(P-O-Si) coupling constants in the case of silicophosphates and calcium phosphates [Si(5)O(PO(4))(6), SiP(2)O(7) polymorphs and α-Ca(PO(3))(2)]; (ii) antisymmetric chemical shift tensors in cyclopropene derivatives, C(3)X(4) (X = H, Cl, F) and (iii) (14)N and (35)Cl NQR predictions in the case of RDX (C(3)H(6)N(6)O(6)), β-HMX (C(4)H(8)N(8)O(8)), α-NTO (C(2)H(2)N(4)O(3)) and AlOPCl(6). RDX, β-HMX and α-NTO are explosive compounds.
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Affiliation(s)
- Christian Bonhomme
- Laboratoire de Chimie de la Matière Condensée, Université Pierre et Marie Curie, Paris 06, CNRS UMR 7574, Collège de France, 75005 Paris, France.
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46
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Hanna JV, Smith ME. Recent technique developments and applications of solid state NMR in characterising inorganic materials. SOLID STATE NUCLEAR MAGNETIC RESONANCE 2010; 38:1-18. [PMID: 20605082 DOI: 10.1016/j.ssnmr.2010.05.004] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2010] [Revised: 05/29/2010] [Accepted: 05/31/2010] [Indexed: 05/04/2023]
Abstract
A broad overview is given of some key recent developments in solid state NMR techniques that have driven enhanced applications to inorganic materials science. Reference is made to advances in hardware, pulse sequences and associated computational methods (e.g. first principles calculations, spectral simulation), along with their combination to provide more information about solid phases. The resulting methodology has allowed more nuclei to be observed and more structural information to be extracted. Cross referencing between experimental parameters and their calculation from the structure has given an added dimension to NMR as a characterisation probe of materials. Emphasis is placed on the progress made in the last decade especially from those nuclei that were little studied previously. The general points about technique development and the increased range of nuclei observed are illustrated through some specific exemplars from inorganic materials science.
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Affiliation(s)
- J V Hanna
- Department of Physics, University of Warwick, Coventry CV47AL, UK
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47
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Affiliation(s)
- Shi Bai
- Department of Chemistry and Biochemistry, University of Delaware, Newark, Delaware 19716, USA
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48
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Truflandier LA, Boucher F, Payen C, Hajjar R, Millot Y, Bonhomme C, Steunou N. DFT-NMR Investigation and 51V 3QMAS Experiments for Probing Surface OH Ligands and the Hydrogen-Bond Network in a Polyoxovanadate Cluster: The Case of Cs4[H2V10O28]·4H2O. J Am Chem Soc 2010; 132:4653-68. [DOI: 10.1021/ja908973y] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Lionel A. Truflandier
- Institut des Matériaux Jean Rouxel (IMN), Université de Nantes, UMR CNRS 6502, 2 rue de la Houssinière, BP 32229, 44340 Nantes Cedex 3, France, Laboratoire des Systèmes Interfaciaux à l’Echelle Nanométrique (SIEN), UMR CNRS 7142, UPMC Univ Paris 06, 4 place Jussieu, 75252 Paris Cedex 05, France, and Laboratoire de Chimie de la Matière Condensée de Paris (LCMCP), UMR CNRS 7574, UPMC Univ Paris 06, Collège de France, 11 place Marcelin Berthelot, 75231 Paris Cedex 05, France
| | - Florent Boucher
- Institut des Matériaux Jean Rouxel (IMN), Université de Nantes, UMR CNRS 6502, 2 rue de la Houssinière, BP 32229, 44340 Nantes Cedex 3, France, Laboratoire des Systèmes Interfaciaux à l’Echelle Nanométrique (SIEN), UMR CNRS 7142, UPMC Univ Paris 06, 4 place Jussieu, 75252 Paris Cedex 05, France, and Laboratoire de Chimie de la Matière Condensée de Paris (LCMCP), UMR CNRS 7574, UPMC Univ Paris 06, Collège de France, 11 place Marcelin Berthelot, 75231 Paris Cedex 05, France
| | - Christophe Payen
- Institut des Matériaux Jean Rouxel (IMN), Université de Nantes, UMR CNRS 6502, 2 rue de la Houssinière, BP 32229, 44340 Nantes Cedex 3, France, Laboratoire des Systèmes Interfaciaux à l’Echelle Nanométrique (SIEN), UMR CNRS 7142, UPMC Univ Paris 06, 4 place Jussieu, 75252 Paris Cedex 05, France, and Laboratoire de Chimie de la Matière Condensée de Paris (LCMCP), UMR CNRS 7574, UPMC Univ Paris 06, Collège de France, 11 place Marcelin Berthelot, 75231 Paris Cedex 05, France
| | - Redouane Hajjar
- Institut des Matériaux Jean Rouxel (IMN), Université de Nantes, UMR CNRS 6502, 2 rue de la Houssinière, BP 32229, 44340 Nantes Cedex 3, France, Laboratoire des Systèmes Interfaciaux à l’Echelle Nanométrique (SIEN), UMR CNRS 7142, UPMC Univ Paris 06, 4 place Jussieu, 75252 Paris Cedex 05, France, and Laboratoire de Chimie de la Matière Condensée de Paris (LCMCP), UMR CNRS 7574, UPMC Univ Paris 06, Collège de France, 11 place Marcelin Berthelot, 75231 Paris Cedex 05, France
| | - Yannick Millot
- Institut des Matériaux Jean Rouxel (IMN), Université de Nantes, UMR CNRS 6502, 2 rue de la Houssinière, BP 32229, 44340 Nantes Cedex 3, France, Laboratoire des Systèmes Interfaciaux à l’Echelle Nanométrique (SIEN), UMR CNRS 7142, UPMC Univ Paris 06, 4 place Jussieu, 75252 Paris Cedex 05, France, and Laboratoire de Chimie de la Matière Condensée de Paris (LCMCP), UMR CNRS 7574, UPMC Univ Paris 06, Collège de France, 11 place Marcelin Berthelot, 75231 Paris Cedex 05, France
| | - Christian Bonhomme
- Institut des Matériaux Jean Rouxel (IMN), Université de Nantes, UMR CNRS 6502, 2 rue de la Houssinière, BP 32229, 44340 Nantes Cedex 3, France, Laboratoire des Systèmes Interfaciaux à l’Echelle Nanométrique (SIEN), UMR CNRS 7142, UPMC Univ Paris 06, 4 place Jussieu, 75252 Paris Cedex 05, France, and Laboratoire de Chimie de la Matière Condensée de Paris (LCMCP), UMR CNRS 7574, UPMC Univ Paris 06, Collège de France, 11 place Marcelin Berthelot, 75231 Paris Cedex 05, France
| | - Nathalie Steunou
- Institut des Matériaux Jean Rouxel (IMN), Université de Nantes, UMR CNRS 6502, 2 rue de la Houssinière, BP 32229, 44340 Nantes Cedex 3, France, Laboratoire des Systèmes Interfaciaux à l’Echelle Nanométrique (SIEN), UMR CNRS 7142, UPMC Univ Paris 06, 4 place Jussieu, 75252 Paris Cedex 05, France, and Laboratoire de Chimie de la Matière Condensée de Paris (LCMCP), UMR CNRS 7574, UPMC Univ Paris 06, Collège de France, 11 place Marcelin Berthelot, 75231 Paris Cedex 05, France
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49
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Widdifield CM, Bryce DL. Solid-State 79/81Br NMR and Gauge-Including Projector-Augmented Wave Study of Structure, Symmetry, and Hydration State in Alkaline Earth Metal Bromides. J Phys Chem A 2010; 114:2102-16. [DOI: 10.1021/jp909106j] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Cory M. Widdifield
- Department of Chemistry and Centre for Catalysis Research and Innovation, University of Ottawa, 10 Marie Curie Pvt., Ottawa, Ontario, Canada
| | - David L. Bryce
- Department of Chemistry and Centre for Catalysis Research and Innovation, University of Ottawa, 10 Marie Curie Pvt., Ottawa, Ontario, Canada
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50
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Pedone A, Charpentier T, Menziani MC. Multinuclear NMR of CaSiO3 glass: simulation from first-principles. Phys Chem Chem Phys 2010; 12:6054-66. [DOI: 10.1039/b924489a] [Citation(s) in RCA: 60] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
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