1
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Apangu GP, Frisk CA, Petch GM, Hanson M, Skjøth CA. Unmanaged grasslands are a reservoir of Alternaria and other important fungal species with differing emission patterns. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2024; 370:122416. [PMID: 39255575 DOI: 10.1016/j.jenvman.2024.122416] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/13/2024] [Revised: 08/31/2024] [Accepted: 09/02/2024] [Indexed: 09/12/2024]
Abstract
Alternaria is a ubiquitous fungal genus with many allergenic and pathogenic species inhabiting grasslands. We hypothesise that grasslands (natural/man-made) host a diversity of fungal species whose spores have varying emission patterns. Therefore, the purpose of this study was to examine the potential of grasslands for emission, diversity and composition of Alternaria and other fungal species. To test the hypothesis, Hirst-type and multi-vial Cyclone samplers collected air samples from two grassland sites (unmanaged and managed) and a non-grassland site at Lakeside campus of the University of Worcester, United Kingdom for the period May to September 2019. The unmanaged grassland was originally planted with grasses and left uncut for three years. The managed grassland was a roadside verge that was cut once every year, typically after most grasses have flowered. We used optical microscopy and Illumina MiSeq sequencing to investigate the emission, abundance, diversity and composition of the fungal spores from each site alongside meteorological variables. Kruskal-Wallis and Wilcoxon tests examined differences in the bi-hourly Alternaria concentrations between the sites. Shannon's and Simpson's Index determined the diversity of the fungal spores between the unmanaged and non-grassland sites. The results showed that grasslands are a strong source of Alternaria spores with considerably higher numbers of clinically important days compared with the non-grassland site. The managed grassland varied in Alternaria spore emission pattern from the unmanaged, probably due to differences in environmental variables and cutting frequency. The unmanaged grassland and non-grassland sites showed a high diversity of fungi including Alternaria, Cladosporium, Ascochyta, Botrytis and Aureobasidium. Overall, the study shows that grasslands are a strong source of fungal spores with allergenic and pathogenic potential and have varying emission patterns, compared with nearby urban areas where monitoring stations are located. This information is useful for atmospheric modelling of airborne fungal spore sources and has implications for allergy sufferers in particular.
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Affiliation(s)
- Godfrey Philliam Apangu
- University of Worcester, School of Science and the Environment, Henwick Grove, WR2 6AJ, Worcester, United Kingdom.
| | - Carl Alexander Frisk
- University of Worcester, School of Science and the Environment, Henwick Grove, WR2 6AJ, Worcester, United Kingdom
| | - Geoffrey M Petch
- University of Worcester, School of Science and the Environment, Henwick Grove, WR2 6AJ, Worcester, United Kingdom
| | - Mary Hanson
- University of Worcester, School of Science and the Environment, Henwick Grove, WR2 6AJ, Worcester, United Kingdom
| | - Carsten Ambelas Skjøth
- University of Worcester, School of Science and the Environment, Henwick Grove, WR2 6AJ, Worcester, United Kingdom
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2
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Zhang Y, Wang Y, Han Y, Zhu S, Yan X. Impact of haze on potential pathogens in surface bioaerosol in urban environments. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 355:124164. [PMID: 38754692 DOI: 10.1016/j.envpol.2024.124164] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Revised: 04/18/2024] [Accepted: 05/13/2024] [Indexed: 05/18/2024]
Abstract
Air quality considerably affects bioaerosol dynamics within the atmosphere. Frequent haze events, with their associated alterations in bioaerosol composition, may pose potential health risks. This study investigated the microbial diversity, community structure, and factors of PM2.5 within an urban environment. We further examined the impact of haze on potentially pathogenic bacteria in bioaerosols, and analyzed the sources of haze pollution. Key findings revealed that the highest levels of microbial richness and diversity were associated with lightly polluted air conditions. While the overall bacterial community structure remained relatively consistent across different air quality levels, the relative abundance of specific bacterial taxa exhibited variations. Meteorological and environmental conditions, particularly sulfur dioxide, nitrogen dioxide, and carbon monoxide, exerted a greater influence on bacterial diversity and community structure compared to the physicochemical properties of the PM2.5 particles themselves. Notably, haze events were observed to strengthen interactions among airborne pathogens. Stable carbon isotope analysis suggested that coal combustion and automobile exhaust were likely to represent the primary source of haze during winter months. These findings indicate that adoption of clean energy alternatives such as natural gas and electricity, and the use of public transportation, is crucial to mitigate particle and harmful pollutant emissions, thereby protecting public health.
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Affiliation(s)
- Yu Zhang
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Ying Wang
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Yunping Han
- State Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Shuai Zhu
- School of Environment, Key Laboratory for Yellow River and Huai River Water Environment and Pollution Control, Ministry of Education, Henan Key Laboratory for Environmental Pollution Control, Henan Normal University, Xinxiang 453007, Henan, China.
| | - Xu Yan
- School of Environment, Key Laboratory for Yellow River and Huai River Water Environment and Pollution Control, Ministry of Education, Henan Key Laboratory for Environmental Pollution Control, Henan Normal University, Xinxiang 453007, Henan, China.
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3
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Tong K, He Y, Wei Y, Yun Y, Sang N. Diel variations of airborne microbes and antibiotic resistance genes in Response to urban PM 2.5 chemical properties during the heating season. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 352:124120. [PMID: 38729506 DOI: 10.1016/j.envpol.2024.124120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2024] [Revised: 05/04/2024] [Accepted: 05/06/2024] [Indexed: 05/12/2024]
Abstract
Among the components of fine particulate matter (PM2.5), the contributions of airborne microorganisms and antibiotic resistance genes (ARGs) to health risks have been overlooked. Airborne microbial dynamics exhibit a unique diurnal cycle due to environmental influences. However, the specific roles of PM2.5 chemical properties resulting from fossil fuel combustion in driving circadian fluctuations in microbial populations and ARGs remain unclear. This study explored the interactions between toxic components and microbial communities during the heating period to understand the variations in ARGs. Bacterial and fungal communities showed a higher susceptibility to diel variations in PM2.5 compared to their chemical properties. Mantel tests revealed that chemical properties and microbial community interactions contribute differently to ARG variations, both directly and indirectly, during circadian fluctuations. Our findings highlight that, during the daytime, the enrichment of pathogenic microorganisms and ARGs increases the risk of PM2.5 toxicity. Conversely, during the nighttime, the utilization of water-soluble ions by the fungal community increased, leading to a significant increase in fungal biomass. Notably, Aspergillus exhibited a significant correlation with mobile genetic elements and ARGs, implying that this genus is a crucial driver of airborne ARGs. This study provides novel insights into the interplay between the chemical composition, microbial communities, and ARGs in PM, underscoring the urgent need for a comprehensive understanding of effective air pollution control strategies.
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Affiliation(s)
- Kangbo Tong
- College of Environment and Resource, Shanxi University, Taiyuan, Shanxi, 030006, China
| | - Yupeng He
- College of Environment and Resource, Shanxi University, Taiyuan, Shanxi, 030006, China
| | - Yue Wei
- College of Environment and Resource, Shanxi University, Taiyuan, Shanxi, 030006, China
| | - Yang Yun
- College of Environment and Resource, Shanxi University, Taiyuan, Shanxi, 030006, China.
| | - Nan Sang
- College of Environment and Resource, Shanxi University, Taiyuan, Shanxi, 030006, China
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4
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Hussain S, Siddique A, Hassan M, Rasool K, Shahzad A, Asad Naqvi SA, Ul Mustafa MR. Characteristics and health implications of fine particulate matter near urban road site in Islamabad, Pakistan. ENVIRONMENTAL RESEARCH 2024; 252:118862. [PMID: 38574984 DOI: 10.1016/j.envres.2024.118862] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2024] [Revised: 03/21/2024] [Accepted: 04/01/2024] [Indexed: 04/06/2024]
Abstract
The escalating issue of air pollution has become a significant concern in urban regions, including Islamabad, Pakistan, due to the rise in air pollutant emissions driven by economic and industrial expansion. To gain a deeper understanding of air pollution, a study was conducted during winter 2022-2023, assessing physical, chemical, and biological factors in Islamabad. The findings revealed that the average concentration of fine particulate matter (PM2.5) was notably greater than the World Health Organization (WHO) guidelines, reaching 133.39 μg/m³. Additionally, the average concentration of bacteria (308.64 CFU/m³) was notably greater than that of fungi (203.55 CFU/m³) throughout the study. Analytical analyses, including SEM-EDS and FTIR, showed that the PM2.5 in Islamabad is composed of various particles such as soot aggregates, coal fly ash, minerals, bio-particles, and some unidentified particles. EF analysis distinguished PM2.5 sources, enhancing understanding of pollutants origin, whereas Spearman's correlation analysis elucidated constituent interactions, further explaining air quality impact. The results from the Inductively Coupled Plasma Atomic Emission Spectroscopy (ICP-OES) indicated a gradual increase in the total elemental composition of PM2.5 from autumn to winter, maintaining high levels throughout the winter season. Furthermore, a significant variation was found in the mass concentration of PM2.5 when comparing samples collected in the morning and evening. The study also identified the presence of semi-volatile organic compounds (SVOCs) in PM2.5 samples, including polycyclic aromatic hydrocarbons (PAHs) and phenolic compounds, with notable variations in their concentrations. Utilizing health risk assessment models developed by the US EPA, we estimated the potential health risks associated with PM2.5 exposure, highlighting the urgency of addressing air quality issues. These findings provide valuable insights into the sources and composition of PM2.5 in Islamabad, contributing to a comprehensive understanding of air quality and its potential environmental and health implications.
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Affiliation(s)
- Sabir Hussain
- Department of Space Sciences, Institute of Space Technology, Islamabad, 44000, Pakistan
| | - Azhar Siddique
- Qatar Environment and Energy Research Institute (QEERI), Hamad Bin Khalifa University, Qatar Foundation, P.O. Box 5825, Doha, Qatar
| | - Mujtaba Hassan
- Department of Space Sciences, Institute of Space Technology, Islamabad, 44000, Pakistan.
| | - Kashif Rasool
- Qatar Environment and Energy Research Institute (QEERI), Hamad Bin Khalifa University, Qatar Foundation, P.O. Box 5825, Doha, Qatar.
| | - Asif Shahzad
- School of Engineering, RMIT University, Melbourne, VIC, 3001, Australia
| | - Syed Ali Asad Naqvi
- Department of Geography, Government College University Faisalabad, Faisalabad, 38000, Punjab, Pakistan
| | - Muhammad Raza Ul Mustafa
- Department of Civil and Environmental Engineering, Universiti Teknologi PETRONAS, 32610, Seri Iskandar, Perak, Malaysia
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5
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Kang S, Lee JY, Cho KS. Implications of PM 2.5 chemical composition in modulating microbial community dynamics during spring in Seoul. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 348:123834. [PMID: 38518971 DOI: 10.1016/j.envpol.2024.123834] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2023] [Revised: 03/16/2024] [Accepted: 03/19/2024] [Indexed: 03/24/2024]
Abstract
Particulate matter with an aerodynamic diameter of 2.5 μm or less (PM2.5) harbors a diverse microbial community. To assess the ecological dynamics and potential health risks associated with airborne microorganisms, it is crucial to understand the factors influencing microbial communities within PM2.5. This study investigated the influence of abiotic parameters, including air pollutants, PM2.5 chemical composition (water-soluble ions and organics), and meteorological variables, on microbial communities in PM2.5 samples collected in Seoul during the spring season. Results revealed a significant correlation between air pollutants and water-soluble ions of PM2.5 with microbial α-diversity indices. Additionally, air pollutants exerted a dominant effect on the microbial community structure, with stronger correlations observed for fungi than bacteria, whereas meteorological variables including temperature, pressure, wind speed, and humidity exerted a limited influence on fungal α-diversity. Furthermore, the results revealed specific water-soluble ions, such as SO42-, NO3-, and NH4+, as important factors influencing fungal α-diversity, whereas K+ negatively correlated with both microbial α-diversity. Moreover, PM2.5 microbial diversity was affected by organic compounds within PM2.5, with fatty acids exhibited a positive correlation with fungal diversity, while dicarboxylic acids exhibited a negative correlation with it. Furthermore, network analysis revealed direct links between air pollutants and dominant bacterial and fungal genera. The air pollutants exhibited a strong correlation with bacterial genera, such as Arthrospira and Clostridium, and fungal genera, including Aureobasidium and Cladosporium. These results will contribute to our understanding of the ecological dynamics of airborne microorganisms and provide insights into the potential risks associated with PM2.5 exposure.
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Affiliation(s)
- Sookyung Kang
- Department of Environmental Science and Engineering, Ewha Womans University, Seoul, 03760, Republic of Korea
| | - Ji Yi Lee
- Department of Environmental Science and Engineering, Ewha Womans University, Seoul, 03760, Republic of Korea
| | - Kyung-Suk Cho
- Department of Environmental Science and Engineering, Ewha Womans University, Seoul, 03760, Republic of Korea.
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6
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Yang T, Wang X, Jiang L, Hui X, Bi X, Zheng X, Jiang B, Wang X. Mobility, bacterial hosts, and risks of antibiotic resistome in submicron bioaerosols from a full-scale wastewater treatment plant. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2024; 351:119771. [PMID: 38071920 DOI: 10.1016/j.jenvman.2023.119771] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Revised: 11/19/2023] [Accepted: 12/03/2023] [Indexed: 01/14/2024]
Abstract
Antibiotic resistome could be loaded by bioaerosols and escape from wastewater or sludge to atmosphere environments. However, until recently, their profile, mobility, bacterial hosts, and risks in submicron bioaerosols (PM1.0) remain unclear. Here, metagenomic sequencing and assembly were employed to conduct an investigation of antibiotic resistome associated with PM1.0 within and around a full-scale wastewater treatment plant (WWTP). More subtypes of antibiotic resistant genes (ARGs) with higher total abundance were found along the upwind-downwind-WWTP transect. ARGs in WWTP-PM1.0 were mainly mediated by plasmids and transposases were the most prevalent mobile genetic elements (MGEs) co-occurring with ARGs. A contig-based analysis indicated that very small proportions (15.32%-19.74%) of ARGs in WWTP-PM1.0 were flanked by MGEs. Proteobacteria was the most dominant host of ARGs. A total of 28 kinds of potential pathogens, such as Pseudomonas aeruginosa and Escherichia coli, carried multiple ARG types. Compared to upwind, WWTP and corresponding downwind were characterized by higher PM1.0 resistome risk. This study emphasizes the vital role of WWTPs in discharging PM1.0-loaded ARGs and antibiotic resistant pathogens to air, and indicates the need for active safeguard procedures, such as that employees wear masks and work clothes, covering the main emission sites, and collecting and destroying of bioaerosols.
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Affiliation(s)
- Tang Yang
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao, 266033, PR China.
| | - Xuyi Wang
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao, 266033, PR China.
| | - Lu Jiang
- College of Oceanic and Atmospheric Sciences, Ocean University of China, Qingdao, 266100, PR China.
| | - Xiaoliang Hui
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao, 266033, PR China.
| | - Xuejun Bi
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao, 266033, PR China.
| | - Xiang Zheng
- School of Environment & Natural Resources, Renmin University of China, Beijing, 100872, PR China.
| | - Bo Jiang
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao, 266033, PR China.
| | - Xiaodong Wang
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao, 266033, PR China.
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7
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Maszenan AM, Bessarab I, Williams RBH, Petrovski S, Seviour RJ. The phylogeny, ecology and ecophysiology of the glycogen accumulating organism (GAO) Defluviicoccus in wastewater treatment plants. WATER RESEARCH 2022; 221:118729. [PMID: 35714465 DOI: 10.1016/j.watres.2022.118729] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2022] [Revised: 05/22/2022] [Accepted: 06/08/2022] [Indexed: 06/15/2023]
Abstract
This comprehensive review looks critically what is known about members of the genus Defluviicoccus, an example of a glycogen accumulating organism (GAO), in wastewater treatment plants, but found also in other habitats. It considers the operating conditions thought to affect its performance in activated sludge plants designed to remove phosphorus microbiologically, including the still controversial view that it competes with the polyphosphate accumulating bacterium Ca. Accumulibacter for readily biodegradable substrates in the anaerobic zone receiving the influent raw sewage. It looks at its present phylogeny and what is known about it's physiology and biochemistry under the highly selective conditions of these plants, where the biomass is recycled continuously through alternative anaerobic (feed); aerobic (famine) conditions encountered there. The impact of whole genome sequence data, which have revealed considerable intra- and interclade genotypic diversity, on our understanding of its in situ behaviour is also addressed. Particular attention is paid to the problems in much of the literature data based on clone library and next generation DNA sequencing data, where Defluviicoccus identification is restricted to genus level only. Equally problematic, in many publications no attempt has been made to distinguish between Defluviicoccus and the other known GAO, especially Ca. Competibacter, which, as shown here, has a very different ecophysiology. The impact this has had and continues to have on our understanding of members of this genus is discussed, as is the present controversy over its taxonomy. It also suggests where research should be directed to answer some of the important research questions raised in this review.
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Affiliation(s)
- Abdul M Maszenan
- E2S2, NUS Environmental Research Institute, National University of Singapore, 117411, Singapore
| | - Irina Bessarab
- Singapore Centre for Environmental Life Sciences Engineering, National University of Singapore, 117456, Singapore
| | - Rohan B H Williams
- Singapore Centre for Environmental Life Sciences Engineering, National University of Singapore, 117456, Singapore
| | - Steve Petrovski
- Department of Microbiology, Anatomy, Physiology and Pharmacology, La Trobe University, 3086 Victoria, Australia
| | - Robert J Seviour
- Department of Microbiology, Anatomy, Physiology and Pharmacology, La Trobe University, 3086 Victoria, Australia.
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8
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Jiang S, Sun B, Zhu R, Che C, Ma D, Wang R, Dai H. Airborne microbial community structure and potential pathogen identification across the PM size fractions and seasons in the urban atmosphere. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 831:154665. [PMID: 35314242 DOI: 10.1016/j.scitotenv.2022.154665] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2021] [Revised: 03/14/2022] [Accepted: 03/14/2022] [Indexed: 06/14/2023]
Abstract
As a vital component of airborne bioaerosols, bacteria and fungi seriously endanger human health as pathogens and allergens. However, comprehensive effects of environmental variables on airborne microbial community structures remain poorly understood across the PM sizes and seasons. We collected atmospheric PM1.0, PM2.5, and PM10 samples in Hefei, a typical rapidly-developing city in East China, across three seasons, and performed a comprehensive analysis of airborne microbial community structures using qPCR and high-throughput sequencing. Overall the bacterial and fungal abundances in PM1.0 were one to two orders of magnitude higher than those in PM2.5 and PM10 across seasons, but their α-diversity tended to increase from PM1.0 to PM10. The bacterial gene abundances showed a strong positive correlation (P < 0.05) with atmospheric SO2 and NO2 concentrations and air quality index. The bacterial gene abundances were significantly higher (P = 0.001) than fungi, and the bacterial diversity showed stronger seasonality. The PM sizes influenced distribution patterns for airborne microbial communities within the same season. Source-tracking analysis indicated that soils, plants, human and animal feces represented important sources of airborne bacteria with a total relative abundance of more than 60% in summer, but total abundance from the unidentified sources surpassed in fall and winter. Total 10 potential bacterial and 12 potential fungal pathogens were identified at the species level with the highest relative abundances in summer, and their abundances increased with the PM sizes. Together, our results indicated that a complex set of environmental factors, including water-soluble ions in PM, changes in air pollutant levels and meteorological conditions, and shifts in the relative importance of available microbial sources, acted to control the seasonal compositions of microbial communities in the urban atmosphere.
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Affiliation(s)
- Shaoyi Jiang
- Institute of Polar Environment & Anhui Key Laboratory of Polar Environment and Global Change, School of Earth and Space Sciences, University of Science and Technology of China, Hefei 230026, China
| | - Bowen Sun
- Institute of Polar Environment & Anhui Key Laboratory of Polar Environment and Global Change, School of Earth and Space Sciences, University of Science and Technology of China, Hefei 230026, China
| | - Renbin Zhu
- Institute of Polar Environment & Anhui Key Laboratory of Polar Environment and Global Change, School of Earth and Space Sciences, University of Science and Technology of China, Hefei 230026, China.
| | - Chenshuai Che
- Institute of Polar Environment & Anhui Key Laboratory of Polar Environment and Global Change, School of Earth and Space Sciences, University of Science and Technology of China, Hefei 230026, China
| | - Dawei Ma
- State Grid Anhui Electric Power Research Institute, Hefei 230601, China
| | - Runfang Wang
- State Grid Anhui Electric Power Research Institute, Hefei 230601, China
| | - Haitao Dai
- Institute of Polar Environment & Anhui Key Laboratory of Polar Environment and Global Change, School of Earth and Space Sciences, University of Science and Technology of China, Hefei 230026, China
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9
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Yang T, Jiang L, Bi X, Cheng L, Zheng X, Wang X, Zhou X. Submicron aerosols share potential pathogens and antibiotic resistomes with wastewater or sludge. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 821:153521. [PMID: 35104511 DOI: 10.1016/j.scitotenv.2022.153521] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2021] [Revised: 01/24/2022] [Accepted: 01/25/2022] [Indexed: 06/14/2023]
Abstract
Generation of size-segregated aerosols is an important eco-environmental problem in wastewater treatment plants (WWTPs), but the characteristics of potential pathogens and antibiotic resistomes in submicron aerosols (PM1.0) were almost unknown. Here, 16S rRNA gene amplification and shotgun metagenome sequencing were respectively used to study the profiles of potential pathogens and antibiotic resistance genes (ARGs) in PM1.0 from a full-scale WWTP. Acinetobacter and sul1 were respectively the predominant potential pathogens and ARG subtypes in PM1.0 from aeration process. A total of 9 potential pathogens and 147 ARG subtypes, were shared among WWTP-PM1.0, wastewater/sludge, and ambient air. Significant differences of potential pathogens or ARGs were found between WWTP-PM1.0 and wastewater/sludge, however, wastewater/sludge had more crucial source contribution than the ambient air. Moreover, 13 potential pathogens and 40 ARG subtypes were easily aerosolized in PM1.0 from at least one of the treatment units. ARGs were mainly harbored by Proteobacteria, and multidrug resistance genes were the most ARG type carried by potential pathogens. Taken together, this study indicates the prevalence of potential pathogens, ARGs, and ARG-carrying potential pathogens in WWTP-PM1.0, which highlights the potential risk of PM1.0 in spreading potential pathogens and antibiotic resistomes into the air environments.
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Affiliation(s)
- Tang Yang
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao 266033, PR China
| | - Lu Jiang
- College of Oceanic and Atmospheric Sciences, Ocean University of China, Qingdao 266100, PR China.
| | - Xuejun Bi
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao 266033, PR China
| | - Lihua Cheng
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao 266033, PR China.
| | - Xiang Zheng
- School of Environment & Natural Resources, Renmin University of China, Beijing 100872, PR China
| | - Xiaodong Wang
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao 266033, PR China
| | - Xiaolin Zhou
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao 266033, PR China
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10
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Lang X, Xu A, Wang Y, Song Z. Seasonal variation of aerosol fungal community structure in reed constructed wetlands. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:19420-19431. [PMID: 34718950 DOI: 10.1007/s11356-021-17138-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Accepted: 10/17/2021] [Indexed: 06/13/2023]
Abstract
In recent years, the impact of biological aerosols produced by sewage treatment plants on air quality and human health has become a hot spot of concern. Airborne fungi were characterized via KC-1000 large-flow air sampler and Anderson-type six-stage sampler, at free surface flowing reed constructed wetland located in Qingdao City, Shandong Province. The high-throughput sequencing technology and fungal culture-dependent method were selected to analyze the composition and dynamic changes of the fungal community attached to the atmospheric particulate matter in the free surface flow constructed wetland. The results showed that the aerosol concentration of fungi in the constructed wetlands varied from 587 to approximately 3382 CFU m-3, with a peak at the range of 1.10 to 2.10 μm particle size, and the particles (< 4.70 μm) that easily entered the lungs accounted for 57.03 ~ 96.03%. Significant seasonal differences in fungal richness and community diversity were found. The particle size distribution of fungi in atmospheric particles was not obvious. Fungal genera in the atmospheric particulate matter were mainly driven by humidity. However, other factors, i.e., temperature, NO2, SO2, and PM10 contents, also contributed.
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Affiliation(s)
- Xiulu Lang
- School of Geography, Nanjing Normal University, Nanjing, 210023, China
- Key Laboratory of Virtual Geographic Environment (Nanjing Normal University), Ministry of Education, Nanjing, 210023, China
- Jiangsu Center for Collaborative Innovation in Geographical Information Resource Development and Application, Nanjing, 210023, China
| | - Ailing Xu
- School of Environment and Municipal Engineering, Qingdao University of Technology, Qingdao, 266033, China
| | - Yanhua Wang
- School of Geography, Nanjing Normal University, Nanjing, 210023, China.
- Key Laboratory of Virtual Geographic Environment (Nanjing Normal University), Ministry of Education, Nanjing, 210023, China.
- Jiangsu Center for Collaborative Innovation in Geographical Information Resource Development and Application, Nanjing, 210023, China.
| | - Zhiwen Song
- School of Environment and Municipal Engineering, Qingdao University of Technology, Qingdao, 266033, China.
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11
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Wang J, Huang JJ, Lynch I. Seasonal and short-term variations of bacteria and pathogenic bacteria on road deposited sediments. ENVIRONMENTAL RESEARCH 2022; 204:111903. [PMID: 34454932 DOI: 10.1016/j.envres.2021.111903] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2021] [Revised: 08/13/2021] [Accepted: 08/16/2021] [Indexed: 06/13/2023]
Abstract
The bacteria (including pathogenic bacteria) attached to road deposited sediments (RDS) may interrelate with the microbe in the atmosphere, soil and water through resuspension and wash-off, and is of great significance to human and ecological health. However, the characteristics of bacterial communities with different time scale on RDS were unknown to dates. Climate change prolonged the dry days between rain events in many areas, making the varied trend of bacterial communities might be more significant in short term. This study revealed the characteristics of bacterial communities on RDS in urban and suburban areas through seasonal and daily scale. The correlations between other factors (land use, particle size, and chemical components) and the bacterial communities were also analyzed. It was found that the season showed a higher association with the bacterial community diversity than land use and particle size in urban areas. The bacterial community diversity increased substantially throughout the short-term study period (41 days) and the variation of dominant bacteria could be fitted by quadratic function in suburbs. In addition, urbanization notably increased the bacterial community diversity, while the potential pathogenic bacteria were more abundant in the suburban areas, coarse RDS (>75 μm), and in spring. The chemical components on RDS showed special correlations with the relative abundance of dominant bacteria. The research findings would fill the knowledge gap on RDS bacterial communities and be helpful for the future research on the assembly process of bacterial communities.
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Affiliation(s)
- Jingshu Wang
- College of Environmental Science and Engineering/Sino-Canada Joint R&D Centre on Water and Environmental Safety, Nankai University, 300071, Tianjin, China
| | - Jinhui Jeanne Huang
- College of Environmental Science and Engineering/Sino-Canada Joint R&D Centre on Water and Environmental Safety, Nankai University, 300071, Tianjin, China.
| | - Iseult Lynch
- School of Geography, Earth and Environmental Sciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, United Kingdom
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12
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Airborne bacterial community associated with fine particulate matter (PM2.5) under different air quality indices in Temuco city, southern Chile. Arch Microbiol 2022; 204:148. [PMID: 35061108 PMCID: PMC8776980 DOI: 10.1007/s00203-021-02740-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2021] [Revised: 12/21/2021] [Accepted: 12/22/2021] [Indexed: 11/02/2022]
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13
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Zhao Q, Shi Y, Wang Y, Xie X, Li L, Guo L, Chai A, Li B. Quantifying Airborne Dispersal Route of Corynespora cassiicola in Greenhouses. Front Microbiol 2021; 12:716758. [PMID: 34594313 PMCID: PMC8478286 DOI: 10.3389/fmicb.2021.716758] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2021] [Accepted: 08/25/2021] [Indexed: 11/13/2022] Open
Abstract
Target leaf spot (TLS), caused by Corynespora cassiicola, is an emerging and high-incidence disease that has spread rapidly on the global scale. Aerospores released by infected plants play a significant role in the epidemiology of cucumber TLS disease; however, no data exist concerning the infectiousness and particle size of C. cassiicola aerospores, and the experimental evidence for the aerospores transmission was lacking. In the present study, highly effective approaches to collect and quantify aerospores were developed for exposure chamber and greenhouse studies. Quantifiable levels of C. cassiicola aerospores were detected in 27 air samples from nine naturally infested greenhouses, ranging from 198 to 5,969 spores/m3. The C. cassiicola strains isolated from air samples were infective to healthy cucumber plants. Exposure chambers were constructed to study the characteristics of C. cassiicola aerospores released by artificially infested cucumber plants. The particle size of C. cassiicola ranged predominately from 2.1 to 4.7 μm, accounting for 71.97% of the total amount. In addition, the transmission dynamics of C. cassiicola aerospores from donor cucumber plants to recipient cucumber plants were confirmed in exposure chambers and greenhouses. The concentration of C. cassiicola aerospores was positively associated with cucumber TLS disease severity. This study suggested that aerospore dispersal is an important route for the epidemiology of plant fungal disease, and these data will contribute to the development of new strategies for the effective alleviation and control of plant diseases.
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Affiliation(s)
- Qian Zhao
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences (CAS), Beijing, China.,Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing, China
| | - Yanxia Shi
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences (CAS), Beijing, China
| | - Yuhong Wang
- Ningbo Academy of Agricultural Sciences, Ningbo, China
| | - Xuewen Xie
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences (CAS), Beijing, China
| | - Lei Li
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences (CAS), Beijing, China
| | - Liyun Guo
- Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing, China
| | - Ali Chai
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences (CAS), Beijing, China
| | - Baoju Li
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences (CAS), Beijing, China
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14
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Kayalar Ö, Arı A, Babuççu G, Konyalılar N, Doğan Ö, Can F, Şahin ÜA, Gaga EO, Levent Kuzu S, Arı PE, Odabaşı M, Taşdemir Y, Sıddık Cindoruk S, Esen F, Sakın E, Çalışkan B, Tecer LH, Fıçıcı M, Altın A, Onat B, Ayvaz C, Uzun B, Saral A, Döğeroğlu T, Malkoç S, Üzmez ÖÖ, Kunt F, Aydın S, Kara M, Yaman B, Doğan G, Olgun B, Dokumacı EN, Güllü G, Uzunpınar ES, Bayram H. Existence of SARS-CoV-2 RNA on ambient particulate matter samples: A nationwide study in Turkey. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 789:147976. [PMID: 34058581 PMCID: PMC8144095 DOI: 10.1016/j.scitotenv.2021.147976] [Citation(s) in RCA: 31] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2021] [Revised: 05/12/2021] [Accepted: 05/19/2021] [Indexed: 05/04/2023]
Abstract
Coronavirus disease 2019 (COVID-19) is caused by the SARS-CoV-2 virus and has been affecting the world since the end of 2019. The disease led to significant mortality and morbidity in Turkey, since the first case was reported on March 11th, 2020. Studies suggest a positive association between air pollution and SARS-CoV-2 infection. The aim of the present study was to investigate the role of ambient particulate matters (PM), as potential carriers for SARS-CoV-2. Ambient PM samples in various size ranges were collected from 13 sites including urban and urban-background locations and hospital gardens in 10 cities across Turkey between 13th of May and 14th of June 2020 to investigate the possible presence of SARS-CoV-2 RNA on ambient PM. A total of 203 daily samples (TSP, n = 80; PM2.5, n = 33; PM2.5-10, n = 23; PM10μm, n = 19; and 6 size segregated PM, n = 48) were collected using various samplers. The N1 gene and RdRP gene expressions were analyzed for the presence of SARS-CoV-2, as suggested by the Centers for Disease Control and Prevention (CDC). According to real time (RT)-PCR and three-dimensional (3D) digital (d) PCR analysis, dual RdRP and N1 gene positivity were detected in 20 (9.8%) samples. Ambient PM-bound SARS-CoV-2 was analyzed quantitatively and the air concentrations of the virus ranged from 0.1 copies/m3 to 23 copies/m3. The highest percentages of virus detection on PM samples were from hospital gardens in Tekirdağ, Zonguldak, and Istanbul, especially in PM2.5 mode. Findings of this study have suggested that SARS-CoV-2 may be transported by ambient particles, especially at sites close to the infection hot-spots. However, whether this has an impact on the spread of the virus infection remains to be determined.
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Affiliation(s)
- Özgecan Kayalar
- Koç University Research Center for Translational Medicine (KUTTAM), Istanbul, Turkey
| | - Akif Arı
- Department of Environmental Engineering, Faculty of Engineering, Bolu Abant Izzet Baysal University, Gölköy Campus, Bolu, Turkey
| | - Gizem Babuççu
- Koc University Research Center for Infectious Diseases, Department of Medical Microbiology, Koç University School of Medicine, Istanbul, Turkey
| | - Nur Konyalılar
- Koç University Research Center for Translational Medicine (KUTTAM), Istanbul, Turkey
| | - Özlem Doğan
- Koc University Research Center for Infectious Diseases, Department of Medical Microbiology, Koç University School of Medicine, Istanbul, Turkey
| | - Füsun Can
- Koc University Research Center for Infectious Diseases, Department of Medical Microbiology, Koç University School of Medicine, Istanbul, Turkey
| | - Ülkü A Şahin
- Department of Environmental Engineering, Engineering Faculty, Istanbul University-Cerrahpaşa, Avcılar, Istanbul, Turkey
| | - Eftade O Gaga
- Department of Environmental Engineering, Faculty of Engineering, Eskişehir Technical University, Eskişehir, Turkey
| | - S Levent Kuzu
- Department of Environmental Engineering, Civil Engineering Faculty, Yildiz Technical University, Esenler, Istanbul, Turkey
| | - Pelin Ertürk Arı
- Department of Environmental Engineering, Faculty of Engineering, Bolu Abant Izzet Baysal University, Gölköy Campus, Bolu, Turkey
| | - Mustafa Odabaşı
- Department of Environmental Engineering, Dokuz Eylül University, Izmir, Turkey
| | - Yücel Taşdemir
- Department of Environmental Engineering, Faculty of Engineering, Bursa Uludağ University, Bursa, Turkey
| | - S Sıddık Cindoruk
- Department of Environmental Engineering, Faculty of Engineering, Bursa Uludağ University, Bursa, Turkey
| | - Fatma Esen
- Department of Environmental Engineering, Faculty of Engineering, Bursa Uludağ University, Bursa, Turkey
| | - Egemen Sakın
- Department of Environmental Engineering, Faculty of Engineering, Bursa Uludağ University, Bursa, Turkey
| | - Burak Çalışkan
- Department of Environmental Engineering, Faculty of Engineering, Bursa Uludağ University, Bursa, Turkey
| | - Lokman H Tecer
- Department of Environmental Engineering, Çorlu Faculty of Engineering, Namık Kemal University, Tekirdağ, Turkey
| | - Merve Fıçıcı
- Department of Environmental Engineering, Çorlu Faculty of Engineering, Namık Kemal University, Tekirdağ, Turkey
| | - Ahmet Altın
- Department of Environmental Engineering, Zonguldak Bülent Ecevit University, Zonguldak, Turkey
| | - Burcu Onat
- Department of Environmental Engineering, Engineering Faculty, Istanbul University-Cerrahpaşa, Avcılar, Istanbul, Turkey
| | - Coşkun Ayvaz
- Department of Environmental Engineering, Engineering Faculty, Istanbul University-Cerrahpaşa, Avcılar, Istanbul, Turkey
| | - Burcu Uzun
- Department of Environmental Engineering, Engineering Faculty, Istanbul University-Cerrahpaşa, Avcılar, Istanbul, Turkey
| | - Arslan Saral
- Department of Environmental Engineering, Civil Engineering Faculty, Yildiz Technical University, Esenler, Istanbul, Turkey
| | - Tuncay Döğeroğlu
- Department of Environmental Engineering, Faculty of Engineering, Eskişehir Technical University, Eskişehir, Turkey
| | - Semra Malkoç
- Department of Environmental Engineering, Faculty of Engineering, Eskişehir Technical University, Eskişehir, Turkey
| | - Özlem Özden Üzmez
- Department of Environmental Engineering, Faculty of Engineering, Eskişehir Technical University, Eskişehir, Turkey
| | - Fatma Kunt
- Department of Environmental Engineering, Necmettin Erbakan University, Konya, Turkey
| | - Senar Aydın
- Department of Environmental Engineering, Necmettin Erbakan University, Konya, Turkey
| | - Melik Kara
- Department of Environmental Engineering, Dokuz Eylül University, Izmir, Turkey
| | - Barış Yaman
- Department of Environmental Engineering, Dokuz Eylül University, Izmir, Turkey
| | - Güray Doğan
- Department of Environmental Engineering, Akdeniz University, Antalya, Turkey
| | - Bihter Olgun
- Department of Environmental Engineering, Akdeniz University, Antalya, Turkey
| | - Ebru N Dokumacı
- Department of Environmental Engineering, Akdeniz University, Antalya, Turkey
| | - Gülen Güllü
- Department of Environmental Engineering, Hacettepe University, Ankara, Turkey
| | - Elif S Uzunpınar
- Department of Environmental Engineering, Middle East Technical University, Ankara, Turkey
| | - Hasan Bayram
- Koç University Research Center for Translational Medicine (KUTTAM), Istanbul, Turkey; Department of Pulmonary Medicine, School of Medicine, Koç University, Istanbul, Turkey.
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15
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Mishra D, Yadav R, Pratap Singh R, Taneja A, Tiwari R, Khare P. The incorporation of lemongrass oil into chitosan-nanocellulose composite for bioaerosol reduction in indoor air. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 285:117407. [PMID: 34049138 DOI: 10.1016/j.envpol.2021.117407] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/24/2020] [Revised: 04/30/2021] [Accepted: 05/16/2021] [Indexed: 06/12/2023]
Abstract
The bioaerosols present in indoor air play a major role in the transmission of infectious diseases to humans, therefore concern about their exposure is increased recently. In this regard, the present investigation described the preparation of lemongrass essential oil (LGEO) loaded chitosan and cellulose nanofibers composites (CH/CNF) for controlling the indoor air bioaerosol. The evaluation of the inhibitory effect of the composite system on culturable bacteria of the indoor air was done at different sites (air volume from 30 m3 to 80 m3) and in different size fractions of aerosol (<0.25 μm-2.5 μm). The composite system had high encapsulation efficiency (88-91%) and citrals content. A significant reduction in culturable bacteria of aerosol (from 6.23 log CFUm-3 to 2.33 log CFUm-3) was observed in presence of cellulose nanofibers and chitosan composites. The bacterial strains such as Staphylococcus sp., Bacillus cereus, Bacillus pseudomycoides sp., Pseudomonas otitidis, and Pseudomonas sp. Cf0-3 in bioaerosols were inhibited dominantly due to the diffusion of aroma molecules in indoor air. The results indicate that the interaction of diffused aroma molecule from the composite system with bacterial strains enhanced the production of ROS, resulting in loss of membrane integrity of bacterial cells. Among different size fractions of aerosol, the composite system was more effective in finer size fractions (<0.25 μm) of aerosol due to the interaction of smaller aroma compounds with bacterial cells. The study revealed that LGEO loaded chitosan and cellulose nanofibers composites could be a good option for controlling the culturable bacteria even in small-sized respirable bioaerosol.
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Affiliation(s)
- Disha Mishra
- Division of Crop Production and Protection, CSIR-Central Institute of Medicinal and Aromatic Plants, Lucknow, 226 015, India
| | - Ranu Yadav
- Division of Crop Production and Protection, CSIR-Central Institute of Medicinal and Aromatic Plants, Lucknow, 226 015, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Raghvendra Pratap Singh
- Division of Crop Production and Protection, CSIR-Central Institute of Medicinal and Aromatic Plants, Lucknow, 226 015, India
| | - Ajay Taneja
- Department of Chemistry, Dr B.R. Ambedkar University, Agra, 282002, India
| | - Rahul Tiwari
- Department of Chemistry, Dr B.R. Ambedkar University, Agra, 282002, India
| | - Puja Khare
- Division of Crop Production and Protection, CSIR-Central Institute of Medicinal and Aromatic Plants, Lucknow, 226 015, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India.
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16
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Yang T, Jiang L, Cheng L, Zheng X, Bi X, Wang X, Zhou X. Characteristics of size-segregated aerosols emitted from an aerobic moving bed biofilm reactor at a full-scale wastewater treatment plant. JOURNAL OF HAZARDOUS MATERIALS 2021; 416:125833. [PMID: 34492791 DOI: 10.1016/j.jhazmat.2021.125833] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2020] [Revised: 03/21/2021] [Accepted: 04/04/2021] [Indexed: 06/13/2023]
Abstract
Aerosol emissions from wastewater treatment plants (WWTPs) have been associated with health reverberation but studies about characteristics of size-segregated aerosol particulate matter (PM) are scarce. In this study, the measurement of particulate number size distribution in the range of < 10 µm, and the collection of PM10-2.5, PM2.5-1.0 and PM1.0, were conducted from an aerobic moving bed biofilm reactor (MBBR) at a full-scale WWTP. MBBR aerosols showed a unimodal number size distribution, with the majority of particles (>94%) in the ultrafine size range (<100 nm). For toxic metal(loid)s or potential pathogens, significant differences were found within MBBR aerosols (PM10-2.5, PM2.5-1.0, and PM1.0), and also between MBBR aerosols and wastewater. Both wastewater and ambient air had important source contributions for MBBR aerosols. The compositions of toxic metal(loid)s in PM1.0, and the populations of potential bacterial or fungal pathogens in PM10-2.5 and PM2.5-1.0, were dominated by that from wastewater. Compared to PM10-2.5 and PM2.5-1.0, PM1.0 had the highest aerosolization potential for the toxic metal(loid)s of As, Cd, Co, Cr, Li, Mn, Ni, U, and Zn, and the genera of Acinetobacter, Pseudomonas and Fusarium. Due to the size-segregated specialty, targeted measures should be employed to reduce the health risks. CAPSULE: The compositions of toxic metal(loid)s in PM1.0, and the populations of potential pathogens in PM10-2.5 and PM2.5-1.0, were dominated by that from wastewater.
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Affiliation(s)
- Tang Yang
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao 266033, PR China.
| | - Lu Jiang
- College of Oceanic and Atmospheric Sciences, Ocean University of China, Qingdao 266100, PR China.
| | - Lihua Cheng
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao 266033, PR China.
| | - Xiang Zheng
- School of Environment & Natural Resources, Renmin University of China, Beijing 100872, PR China.
| | - Xuejun Bi
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao 266033, PR China.
| | - Xiaodong Wang
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao 266033, PR China.
| | - Xiaolin Zhou
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao 266033, PR China.
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17
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Liu Y, Zhang Y, Shi Y, Shen F, Yang Y, Wang M, Zhang G, Deng T, Lai S. Characterization of fungal aerosol in a landfill and an incineration plants in Guangzhou, Southern China: The link to potential impacts. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 764:142908. [PMID: 33139008 DOI: 10.1016/j.scitotenv.2020.142908] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/27/2020] [Revised: 09/15/2020] [Accepted: 10/02/2020] [Indexed: 05/17/2023]
Abstract
To understand the characteristics and potential impacts of fungal aerosols in waste disposal treatments, we performed observations at a landfill and an incineration plants in Guangzhou, Southern China. Size-segregated airborne fungal concentrations were measured based on culture-dependent method, and fungal compositions in PM2.5 were obtained using high-throughput sequencing method. Concentrations of airborne fungi varied from 376 to 9318 CFU/m3 in the landfill plant and from 53 to 8491 CFU/m3 in the incineration plant, respectively. The temporal and spatial variations of fungal aerosols indicate that waste disposal operation, garbage transport, air mixing, and meteorological factors can significantly influence the variations of airborne fungi in the outdoor environment in both plants. Among the meteorological factors, light/moderate rain could significantly increase the airborne fungal concentrations while heavy rain could decrease the concentrations due to wet scavenge. We observed that culturable fungal aerosols predominantly resided in the size range of 2.1-3.3 μm. Different fungal community structures in PM2.5 were found between the landfill and the incineration plants, suggesting the influence of different waste sorts and treatment procedures. We further identified the pathogenic/allergenic fungal taxa (e.g., Alternaria, Epicoccum sp. and Stachybotrys sp.) in the two plants, implying the potential human health risks with long-term exposure for on-site workers and surrounding residents. The fungal genera producing microbial volatile organic compounds (MVOCs, e.g., Cladosporium, Fusarium sp., Penicillium sp. and Candida) were found in both plants. These MVOCs generation related fungal genera could contribute to the odor in the plants and, more importantly, affect the downwind area after aerosolization and transportation.
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Affiliation(s)
- Ye Liu
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, and Guangdong Provincial Key Laboratory of Atmospheric Environment and Pollution Control, School of Environment and Energy, South China University of Technology, Guangzhou 510006, China
| | - Yingyi Zhang
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, and Guangdong Provincial Key Laboratory of Atmospheric Environment and Pollution Control, School of Environment and Energy, South China University of Technology, Guangzhou 510006, China
| | - Yuting Shi
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, and Guangdong Provincial Key Laboratory of Atmospheric Environment and Pollution Control, School of Environment and Energy, South China University of Technology, Guangzhou 510006, China
| | - Fangxia Shen
- School of Space and Environment, Beihang University, Beijing 100191, China
| | - Ying Yang
- South China Sea Resource Exploitation and Protection Collaborative Innovation Center, School of Marine Sciences, Sun Yat-sen University, Guangzhou, 510275, China
| | - Meijuan Wang
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, and Guangdong Provincial Key Laboratory of Atmospheric Environment and Pollution Control, School of Environment and Energy, South China University of Technology, Guangzhou 510006, China
| | - Guangyang Zhang
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, and Guangdong Provincial Key Laboratory of Atmospheric Environment and Pollution Control, School of Environment and Energy, South China University of Technology, Guangzhou 510006, China
| | - Tao Deng
- Institute of Tropical and Marine Meteorology, China Meteorological Administration, Guangzhou, 510000, China
| | - Senchao Lai
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, and Guangdong Provincial Key Laboratory of Atmospheric Environment and Pollution Control, School of Environment and Energy, South China University of Technology, Guangzhou 510006, China.
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18
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Ruiz-Gil T, Acuña JJ, Fujiyoshi S, Tanaka D, Noda J, Maruyama F, Jorquera MA. Airborne bacterial communities of outdoor environments and their associated influencing factors. ENVIRONMENT INTERNATIONAL 2020; 145:106156. [PMID: 33039877 DOI: 10.1016/j.envint.2020.106156] [Citation(s) in RCA: 80] [Impact Index Per Article: 20.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2020] [Revised: 09/20/2020] [Accepted: 09/21/2020] [Indexed: 05/16/2023]
Abstract
Microbial entities (such bacteria, fungi, archaea and viruses) within outdoor aerosols have been scarcely studied compared with indoor aerosols and nonbiological components, and only during the last few decades have their studies increased. Bacteria represent an important part of the microbial abundance and diversity in a wide variety of rural and urban outdoor bioaerosols. Currently, airborne bacterial communities are mainly sampled in two aerosol size fractions (2.5 and 10 µm) and characterized by culture-dependent (plate-counting) and culture-independent (DNA sequencing) approaches. Studies have revealed a large diversity of bacteria in bioaerosols, highlighting Proteobacteria, Firmicutes, Actinobacteria and Bacteroidetes as ubiquitous phyla. Seasonal variations in and dispersion of bacterial communities have also been observed between geographical locations as has their correlation with specific atmospheric factors. Several investigations have also suggested the relevance of airborne bacteria in the public health and agriculture sectors as well as remediation and atmospheric processes. However, although factors influencing airborne bacterial communities and standardized procedures for their assessment have recently been proposed, the use of bacterial taxa as microbial indicators of specific bioaerosol sources and seasonality have not been broadly explored. Thus, in this review, we summarize and discuss recent advances in the study of airborne bacterial communities in outdoor environments and the possible factors influencing their abundance, diversity, and seasonal variation. Furthermore, airborne bacterial activity and bioprospecting in different fields (e.g., the textile industry, the food industry, medicine, and bioremediation) are discussed. We expect that this review will reveal the relevance and influencing factors of airborne bacteria in outdoor environments as well as stimulate new investigations on the atmospheric microbiome, particularly in areas where air quality is a public concern.
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Affiliation(s)
- Tay Ruiz-Gil
- Doctorado en Ciencias de Recursos Naturales, Facultad de Ingeniería y Ciencias, Universidad de La Frontera, Temuco, Chile; Laboratorio de Ecología Microbiana Aplicada (EMALAB), Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Temuco, Chile
| | - Jacquelinne J Acuña
- Laboratorio de Ecología Microbiana Aplicada (EMALAB), Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Temuco, Chile; Network for Extreme Environment Research (NEXER), Scientific and Technological Bioresource Nucleus (BIOREN), Universidad de La Frontera, Temuco, Chile; Center for Holobiome and Built Environment (CHOBE), Hiroshima University, Japan
| | - So Fujiyoshi
- Laboratorio de Ecología Microbiana Aplicada (EMALAB), Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Temuco, Chile; Network for Extreme Environment Research (NEXER), Scientific and Technological Bioresource Nucleus (BIOREN), Universidad de La Frontera, Temuco, Chile; Microbial Genomics and Ecology, Office of Industry-Academia-Government and Community Collaboration, Hiroshima University, Hiroshima, Japan; Center for Holobiome and Built Environment (CHOBE), Hiroshima University, Japan
| | - Daisuke Tanaka
- Graduate School of Science and Engineering, University of Toyama, Toyama, Japan
| | - Jun Noda
- Center for Holobiome and Built Environment (CHOBE), Hiroshima University, Japan; Graduate School of Veterinary Science, Rakuno Gakuen University, Hokkaido, Japan
| | - Fumito Maruyama
- Laboratorio de Ecología Microbiana Aplicada (EMALAB), Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Temuco, Chile; Network for Extreme Environment Research (NEXER), Scientific and Technological Bioresource Nucleus (BIOREN), Universidad de La Frontera, Temuco, Chile; Microbial Genomics and Ecology, Office of Industry-Academia-Government and Community Collaboration, Hiroshima University, Hiroshima, Japan; Center for Holobiome and Built Environment (CHOBE), Hiroshima University, Japan
| | - Milko A Jorquera
- Laboratorio de Ecología Microbiana Aplicada (EMALAB), Departamento de Ciencias Químicas y Recursos Naturales, Universidad de La Frontera, Temuco, Chile; Network for Extreme Environment Research (NEXER), Scientific and Technological Bioresource Nucleus (BIOREN), Universidad de La Frontera, Temuco, Chile; Center for Holobiome and Built Environment (CHOBE), Hiroshima University, Japan.
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19
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Cellular and Molecular Mechanisms of Environmental Pollutants on Hematopoiesis. Int J Mol Sci 2020; 21:ijms21196996. [PMID: 32977499 PMCID: PMC7583016 DOI: 10.3390/ijms21196996] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2020] [Revised: 09/20/2020] [Accepted: 09/21/2020] [Indexed: 02/07/2023] Open
Abstract
Hematopoiesis is a complex and intricate process that aims to replenish blood components in a constant fashion. It is orchestrated mostly by hematopoietic progenitor cells (hematopoietic stem cells (HSCs)) that are capable of self-renewal and differentiation. These cells can originate other cell subtypes that are responsible for maintaining vital functions, mediate innate and adaptive immune responses, provide tissues with oxygen, and control coagulation. Hematopoiesis in adults takes place in the bone marrow, which is endowed with an extensive vasculature conferring an intense flow of cells. A myriad of cell subtypes can be found in the bone marrow at different levels of activation, being also under constant action of an extensive amount of diverse chemical mediators and enzymatic systems. Bone marrow platelets, mature erythrocytes and leukocytes are delivered into the bloodstream readily available to meet body demands. Leukocytes circulate and reach different tissues, returning or not returning to the bloodstream. Senescent leukocytes, specially granulocytes, return to the bone marrow to be phagocytized by macrophages, restarting granulopoiesis. The constant high production and delivery of cells into the bloodstream, alongside the fact that blood cells can also circulate between tissues, makes the hematopoietic system a prime target for toxic agents to act upon, making the understanding of the bone marrow microenvironment vital for both toxicological sciences and risk assessment. Environmental and occupational pollutants, therapeutic molecules, drugs of abuse, and even nutritional status can directly affect progenitor cells at their differentiation and maturation stages, altering behavior and function of blood compounds and resulting in impaired immune responses, anemias, leukemias, and blood coagulation disturbances. This review aims to describe the most recently investigated molecular and cellular toxicity mechanisms of current major environmental pollutants on hematopoiesis in the bone marrow.
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20
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Bulski K. Bioaerosols at plants processing materials of plant origin-a review. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:27507-27514. [PMID: 32415447 PMCID: PMC7334269 DOI: 10.1007/s11356-020-09121-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2020] [Accepted: 04/29/2020] [Indexed: 05/03/2023]
Abstract
Due to the dynamic development of industry, related to the processing of plant materials and a subsequent significant increase in the number of employees working in this kind of industry, the indoor air quality is of great importance for the human health. The premises of plants processing plant materials are a specific environment, related to exposure to biological agents. The major sources of microbial contamination of premises are employees' activities and the operation of devices used in the production process, quality of plant materials, technological processes, construction materials, ventilation (air-conditioning) systems, and outdoor air. Biological agents (primarily bacteria and fungi) transported in the air can cause numerous adverse health outcomes in exposed workers.
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Affiliation(s)
- Karol Bulski
- Department of Microbiology and Biomonitoring, University of Agriculture in Krakow, Krakow, Poland.
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21
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Wei M, Li M, Xu C, Xu P, Liu H. Pollution characteristics of bioaerosols in PM 2.5 during the winter heating season in a coastal city of northern China. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:27750-27761. [PMID: 32399880 DOI: 10.1007/s11356-020-09070-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2019] [Accepted: 04/27/2020] [Indexed: 06/11/2023]
Abstract
Frequent heavy air pollution occurred during the winter heating season of northern China. In this study, PM2.5 (particles with an aerodynamic diameter less than 2.5 μm) was collected from a coastal city of China during the winter heating season from January 1 to March 31, 2018, and the soluble ions, organic carbon (OC), elemental carbon (EC), bacterial, endotoxin, and fungal concentration in PM2.5 were analyzed. During the winter heating season, PM2.5 and bioaerosols increased on polluted days, and the secondary inorganic ions, including NO3-, NH4+, and SO42-, increased significantly. Meteorological factors, such as wind direction and wind speed, had major impacts on the distributions of PM2.5 and bioaerosols. Pollutant concentration was high when there was a westerly wind with the speed of 3-6 m/s from inland area. Using the air mass backward trajectories and principal component analysis, we elucidate the potential origins of bioaerosol in PM2.5. The backward trajectory suggested that air mass for polluted samples (PM2.5 > 75 μg/m3) commonly originated from continent (9.62%), whereas air masses for clean samples (PM2.5 < 35 μg/m3) were mainly from marine (56.73%). The interregional transport of pollutants from continental area contributed most to PM2.5. Principal component analysis of the water-soluble ions and bioaerosol indicated that air pollution of the coastal city was greatly affected by coal combustion, biomass burning, and regional transmission of high-intensity pollutants from continent. Among that, interregional transport, biomass burning, and dust from soil and plants were main sources of bioaerosol. Our findings provide important insights into the origins and characteristics of bioaerosol in PM2.5 during the winter heating season of the coastal city in northern China.
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Affiliation(s)
- Min Wei
- College of Geography and Environment, Shandong Normal University, Jinan, 250014, China.
- Shanghai Key Laboratory of Atmospheric Particle Pollution and Prevention (LAP3), Fudan Tyndall Centre, Department of Environmental Science & Engineering, Fudan University, Shanghai, 200433, China.
| | - Mingyan Li
- College of Geography and Environment, Shandong Normal University, Jinan, 250014, China
| | - Caihong Xu
- Shanghai Key Laboratory of Atmospheric Particle Pollution and Prevention (LAP3), Fudan Tyndall Centre, Department of Environmental Science & Engineering, Fudan University, Shanghai, 200433, China
| | - Pengju Xu
- College of Geography and Environment, Shandong Normal University, Jinan, 250014, China
| | - Houfeng Liu
- College of Geography and Environment, Shandong Normal University, Jinan, 250014, China.
- Center for Environmental Technology and Policy Research, Shandong Normal University, Jinan, 250014, China.
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22
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Size resolved characteristics of urban and suburban bacterial bioaerosols in Japan as assessed by 16S rRNA amplicon sequencing. Sci Rep 2020; 10:12406. [PMID: 32699373 PMCID: PMC7376176 DOI: 10.1038/s41598-020-68933-z] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2019] [Accepted: 07/03/2020] [Indexed: 02/01/2023] Open
Abstract
To study the size-resolved characteristics of airborne bacterial community composition, diversity, and abundance, outdoor aerosol samples were analysed by 16S rRNA gene-targeted quantitative PCR and amplicon sequencing with Illumina MiSeq. The samples were collected using size-resolved samplers between August and October 2016, at a suburban site in Toyama City and an urban site in Yokohama City, Japan. The bacterial communities were found to be dominated by Actinobacteria, Firmicutes, and Proteobacteria. At the genus level, we found a high abundance of human skin-associated bacteria, such as Propionibacterium, Staphylococcus, and Corynebacterium, in the urban site. Whereas, a high abundance of bacteria associated with soil and plants, such as Methylobacterium and Sphingomonas, was observed in the suburban site. Furthermore, our data revealed a shift in the bacterial community structure, diversity, and abundance of total bacteria at a threshold of 1.1-µm diameter. Interestingly, we observed that Legionella spp., the causal agents of legionellosis in humans, were mainly detected in > 2.1 µm coarse particles. Our data indicate that local environmental factors including built environments could influence the outdoor airborne bacterial community at each site. These results provide a basis for understanding the size-resolved properties of bacterial community composition, diversity, and abundance in outdoor aerosol samples and their potential influence on human health.
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23
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Li X, Cheng X, Wu W, Wang Q, Tong Z, Zhang X, Deng D, Li Y. Forecasting of bioaerosol concentration by a Back Propagation neural network model. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 698:134315. [PMID: 31783453 DOI: 10.1016/j.scitotenv.2019.134315] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2019] [Revised: 09/04/2019] [Accepted: 09/04/2019] [Indexed: 06/10/2023]
Abstract
Bioaerosol in the atmosphere plays a very important role in environment and public health. To forecast the bioaerosol concentration, the correlation between bioaerosol concentration and meteorological factors was discussed, and a Back Propagation (BP) neural network with Principal Component Analysis (PCA) method was utilized in this study. The proposed method works in three steps. The first step is to compute the correlation between bioaerosol concentration and meteorological factors, which consists of analyzing correlation and selecting meteorological factors applied to the study of forecast model. The second step is to use PCA analysis to reduce the dimensions of meteorological dataset. The third step is to use BP neural network, setting up, training BP neural network and proving the feasibility of forecast model included. The results of our model in forecasting bioaerosol concentration show 10.55% of average relative error, 2.80 pieces/L (pcs/L) of average absolute error, and 84.01 grade of forecast accuracy, providing a promising model for the forecasting of bioaerosol concentration.
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Affiliation(s)
- Xiaonan Li
- Department of Biology and Chemistry, College of Liberal Arts and Sciences, National University of Defense Technology, Changsha 410073, China
| | - Xi Cheng
- Department of Biology and Chemistry, College of Liberal Arts and Sciences, National University of Defense Technology, Changsha 410073, China
| | - Wenjian Wu
- Department of Biology and Chemistry, College of Liberal Arts and Sciences, National University of Defense Technology, Changsha 410073, China
| | - Qinghua Wang
- Department of Biology and Chemistry, College of Liberal Arts and Sciences, National University of Defense Technology, Changsha 410073, China
| | - Zhaoyang Tong
- State Key Laboratory of NBC Protection for Civilian, Beijing 102205, China
| | - Xiaoqing Zhang
- Beijing Huifenglong Economic and Technological Development Co. LTD, Beijing 100085, China
| | - Dahai Deng
- Meteorological Bureau of Changsha Municipality, Changsha 410205, China
| | - Yihe Li
- Department of Biology and Chemistry, College of Liberal Arts and Sciences, National University of Defense Technology, Changsha 410073, China.
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24
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Li H, Wei X, Zhang X, Xu H, Zhao X, Zhou S, Huang S, Liu X. Establishment of a multiplex RT-PCR assay for identification of atmospheric virus contamination in pig farms. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2019; 253:358-364. [PMID: 31325880 DOI: 10.1016/j.envpol.2019.07.028] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2019] [Revised: 06/20/2019] [Accepted: 07/06/2019] [Indexed: 06/10/2023]
Abstract
Spread of pathogens in pig farms not only causes transfection of diseases to other pigs or even farmers working in the farms, but also induces pollution to the living atmospheric environment of the residents around the farm. Therefore, it is necessary to establish a rapid and simple monitoring method. In this study, full genome sequences of common viruses were analyzed in pig farms, in combination with the design of primers, optimization of the reaction parameters, so as to establish a multiplex RT-PCR assay for the identification of classical swine fever virus (CSFV), Japanese encephalitis virus (JEV), porcine reproductive and respiratory syndrome virus (PRRSV), porcine circovirus Type 2 (PCV-2), porcine pseudorabies virus (PRV) and porcine parvovirus virus (PPV), which are common in pig farms. This method has a minimal detectable concentration of 10-3 ng/μL, which is highly specific. Furthermore, multiplex RT-PCR was applied to examine air samples from 4 pig farms located in different cities of China. The results were in line with those obtained by single PCR. Therefore, this study can be expected to provide essential technique support for the early warning mechanism as well as disease prevention and control system against the major viruses.
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Affiliation(s)
- Han Li
- Henan Institute of Science and Technology, Xinxiang 453003, Henan, PR China.
| | - Xiaobing Wei
- Henan Institute of Science and Technology, Xinxiang 453003, Henan, PR China
| | - Xiulin Zhang
- Henan Institute of Science and Technology, Xinxiang 453003, Henan, PR China
| | - Hao Xu
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China
| | - Xuesong Zhao
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China
| | - Shaofeng Zhou
- School of Environmental Science and Engineering, Guangdong University of Technology, Guangzhou 510006, PR China
| | - Shaobin Huang
- School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China
| | - Xingyou Liu
- Xinxiang University, Xinxiang 453003, Henan, PR China
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25
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Aalismail NA, Ngugi DK, Díaz-Rúa R, Alam I, Cusack M, Duarte CM. Functional metagenomic analysis of dust-associated microbiomes above the Red Sea. Sci Rep 2019; 9:13741. [PMID: 31551441 PMCID: PMC6760216 DOI: 10.1038/s41598-019-50194-0] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2019] [Accepted: 09/06/2019] [Indexed: 02/08/2023] Open
Abstract
Atmospheric transport is a major vector for the long-range transport of microbial communities, maintaining connectivity among them and delivering functionally important microbes, such as pathogens. Though the taxonomic diversity of aeolian microorganisms is well characterized, the genomic functional traits underpinning their survival during atmospheric transport are poorly characterized. Here we use functional metagenomics of dust samples collected on the Global Dust Belt to initiate a Gene Catalogue of Aeolian Microbiome (GCAM) and explore microbial genetic traits enabling a successful aeolian lifestyle in Aeolian microbial communities. The GCAM reported here, derived from ten aeolian microbial metagenomes, includes a total of 2,370,956 non-redundant coding DNA sequences, corresponding to a yield of ~31 × 106 predicted genes per Tera base-pair of DNA sequenced for the aeolian samples sequenced. Two-thirds of the cataloged genes were assigned to bacteria, followed by eukaryotes (5.4%), archaea (1.1%), and viruses (0.69%). Genes encoding proteins involved in repairing UV-induced DNA damage and aerosolization of cells were ubiquitous across samples, and appear as fundamental requirements for the aeolian lifestyle, while genes coding for other important functions supporting the aeolian lifestyle (chemotaxis, aerotaxis, germination, thermal resistance, sporulation, and biofilm formation) varied among the communities sampled.
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Affiliation(s)
- Nojood A Aalismail
- Red Sea Research Centre (RSRC) and Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955, Saudi Arabia.
| | - David K Ngugi
- Department of Microorganisms, Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Culture, Inhoffenstrasse 7B, B38124, Braunschweig, Germany
| | - Rubén Díaz-Rúa
- Red Sea Research Centre (RSRC) and Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955, Saudi Arabia
| | - Intikhab Alam
- Computational Bioscience Research Center, King Abdullah University of Science and Technology, Thuwal, 23955, Saudi Arabia
| | - Michael Cusack
- Red Sea Research Centre (RSRC) and Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955, Saudi Arabia
| | - Carlos M Duarte
- Red Sea Research Centre (RSRC) and Computational Bioscience Research Center (CBRC), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955, Saudi Arabia
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26
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Zhang S, Huo X, Zhang Y, Lu X, Xu C, Xu X. The association of PM 2.5 with airway innate antimicrobial activities of salivary agglutinin and surfactant protein D. CHEMOSPHERE 2019; 226:915-923. [PMID: 31509921 DOI: 10.1016/j.chemosphere.2019.04.032] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2019] [Revised: 04/04/2019] [Accepted: 04/04/2019] [Indexed: 02/05/2023]
Abstract
Fine particulate matter ≤2.5 μm (PM2.5) is a prominent global public health risk factor that can cause respiratory infection by downregulating the amounts of antimicrobial proteins and peptides (AMPs). Both salivary agglutinin (SAG) and surfactant protein D (SPD) are important AMPs in respiratory mucosal fluid, providing protection against airway pathogen invasion and infection by inducing microbial aggregation and enhancing pathogen clearance. However, the relationship between PM2.5 and these AMPs is unclear. To better understand the relationship between PM2.5 and airway innate immune defenses, we review the respiratory antimicrobial activities of SAG and SPD, as well as the adverse effects of PM2.5 on airway innate antimicrobial defense. We speculate there exists a dual effect between PM2.5 and respiratory antimicrobial activity, which means that PM2.5 suppresses respiratory antimicrobial activity through downregulating airway AMPs, while airway AMPs accelerate PM2.5 clearance by inducing PM2.5 microbial aggregation. We propose further research on the relationship between PM2.5 and these AMPs.
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Affiliation(s)
- Shaocheng Zhang
- Laboratory of Environmental Medicine and Developmental Toxicology, Shantou University Medical College, Shantou, 515041, Guangdong, China
| | - Xia Huo
- Laboratory of Environmental Medicine and Developmental Toxicology, Guangdong Key Laboratory of Environmental Pollution and Health, School of Environment, Jinan University, Guangzhou, 511486, Guangdong, China
| | - Yuling Zhang
- Laboratory of Environmental Medicine and Developmental Toxicology, Shantou University Medical College, Shantou, 515041, Guangdong, China
| | - Xueling Lu
- Laboratory of Environmental Medicine and Developmental Toxicology, Shantou University Medical College, Shantou, 515041, Guangdong, China
| | - Cheng Xu
- Laboratory of Environmental Medicine and Developmental Toxicology, Shantou University Medical College, Shantou, 515041, Guangdong, China
| | - Xijin Xu
- Laboratory of Environmental Medicine and Developmental Toxicology, Shantou University Medical College, Shantou, 515041, Guangdong, China; Department of Cell Biology and Genetics, Shantou University Medical College, Shantou, 515041, Guangdong, China.
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