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Choudhary A, Anand A, Singh A, Roy P, Singh N, Kumar V, Sharma S, Baranwal M. Machine learning-based ensemble approach in prediction of lung cancer predisposition using XRCC1 gene polymorphism. J Biomol Struct Dyn 2024; 42:7828-7837. [PMID: 37545160 DOI: 10.1080/07391102.2023.2242492] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2022] [Accepted: 07/23/2023] [Indexed: 08/08/2023]
Abstract
The employment of machine learning approaches has shown promising results in predicting cancer. In the current study, polymorphisms data of five single nucleotide polymorphisms (SNPs) of DNA repair gene XRCC1 (XRCC1 399, XRCC1 194, XRCC1 206, XRCC1 632, XRCC1 280) of the north Indian population along with four smoking status data is considered as an input to the proposed ensemble model to predict the risk of individual susceptibility to the lung cancer. The prediction accuracy of the proposed ensemble model for cancer predisposition was found to be 85%. The model performance is also evaluated using sensitivity, specificity, precision and the Gini index, which is found in the range of 0.83-0.87. The proposed model also outperformed in all evaluation parameters when compared with the individual Model (LM, SVM, RF, KNN and baseline neural net). Collectively, current results suggest the potential of the proposed ensemble model in predicting the risk of cancer based on XRCC1 SNPs data.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Abhishek Choudhary
- Department of Computer Science, Thapar Institute of Engineering & Technology, India
| | - Adarsh Anand
- Department of Electronics & Communication Engineering, Thapar Institute of Engineering & Technology, India
| | - Amrita Singh
- Department of Biotechnology, Thapar Institute of Engineering & Technology, Patiala, Punjab, India
| | - Pratima Roy
- Department of Biotechnology, Thapar Institute of Engineering & Technology, Patiala, Punjab, India
| | - Navneet Singh
- Department of Pulmonary Medicine, Post Graduate Institute of Education and Medical Research (PGIMER), Chandigarh, India
| | - Vinay Kumar
- Department of Electronics & Communication Engineering, Thapar Institute of Engineering & Technology, India
| | - Siddharth Sharma
- Department of Biotechnology, Thapar Institute of Engineering & Technology, Patiala, Punjab, India
| | - Manoj Baranwal
- Department of Biotechnology, Thapar Institute of Engineering & Technology, Patiala, Punjab, India
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2
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Yarici M, Von Rosenberg W, Hammour G, Davies H, Amadori P, Ling N, Demiris Y, Mandic DP. Hearables: feasibility of recording cardiac rhythms from single in-ear locations. ROYAL SOCIETY OPEN SCIENCE 2024; 11:221620. [PMID: 38179073 PMCID: PMC10762432 DOI: 10.1098/rsos.221620] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/21/2023] [Accepted: 11/27/2023] [Indexed: 01/06/2024]
Abstract
The ear is well positioned to accommodate both brain and vital signs monitoring, via so-called hearable devices. Consequently, ear-based electroencephalography has recently garnered great interest. However, despite the considerable potential of hearable based cardiac monitoring, the biophysics and characteristic cardiac rhythm of ear-based electrocardiography (ECG) are not yet well understood. To this end, we map the cardiac potential on the ear through volume conductor modelling and measurements on multiple subjects. In addition, in order to demonstrate real-world feasibility of in-ear ECG, measurements are conducted throughout a long-time simulated driving task. As a means of evaluation, the correspondence between the cardiac rhythms obtained via the ear-based and standard Lead I measurements, with respect to the shape and timing of the cardiac rhythm, is verified through three measures of similarity: the Pearson correlation, and measures of amplitude and timing deviations. A high correspondence between the cardiac rhythms obtained via the ear-based and Lead I measurements is rigorously confirmed through agreement between simulation and measurement, while the real-world feasibility was conclusively demonstrated through efficacious cardiac rhythm monitoring during prolonged driving. This work opens new avenues for seamless, hearable-based cardiac monitoring that extends beyond heart rate detection to offer cardiac rhythm examination in the community.
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Affiliation(s)
- Metin Yarici
- Department of Electrical and Electronic Engineering, Imperial College London, London SW7 2AZ, UK
| | - Wilhelm Von Rosenberg
- Department of Electrical and Electronic Engineering, Imperial College London, London SW7 2AZ, UK
| | - Ghena Hammour
- Department of Electrical and Electronic Engineering, Imperial College London, London SW7 2AZ, UK
| | - Harry Davies
- Department of Electrical and Electronic Engineering, Imperial College London, London SW7 2AZ, UK
| | - Pierluigi Amadori
- Department of Electrical and Electronic Engineering, Imperial College London, London SW7 2AZ, UK
| | - Nico Ling
- Department of Electrical and Electronic Engineering, Imperial College London, London SW7 2AZ, UK
| | - Yiannis Demiris
- Department of Electrical and Electronic Engineering, Imperial College London, London SW7 2AZ, UK
| | - Danilo P. Mandic
- Department of Electrical and Electronic Engineering, Imperial College London, London SW7 2AZ, UK
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Ansari MY, Qaraqe M, Charafeddine F, Serpedin E, Righetti R, Qaraqe K. Estimating age and gender from electrocardiogram signals: A comprehensive review of the past decade. Artif Intell Med 2023; 146:102690. [PMID: 38042607 DOI: 10.1016/j.artmed.2023.102690] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2023] [Revised: 10/13/2023] [Accepted: 10/18/2023] [Indexed: 12/04/2023]
Abstract
Twelve lead electrocardiogram signals capture unique fingerprints about the body's biological processes and electrical activity of heart muscles. Machine learning and deep learning-based models can learn the embedded patterns in the electrocardiogram to estimate complex metrics such as age and gender that depend on multiple aspects of human physiology. ECG estimated age with respect to the chronological age reflects the overall well-being of the cardiovascular system, with significant positive deviations indicating an aged cardiovascular system and a higher likelihood of cardiovascular mortality. Several conventional, machine learning, and deep learning-based methods have been proposed to estimate age from electronic health records, health surveys, and ECG data. This manuscript comprehensively reviews the methodologies proposed for ECG-based age and gender estimation over the last decade. Specifically, the review highlights that elevated ECG age is associated with atherosclerotic cardiovascular disease, abnormal peripheral endothelial dysfunction, and high mortality, among many other cardiovascular disorders. Furthermore, the survey presents overarching observations and insights across methods for age and gender estimation. This paper also presents several essential methodological improvements and clinical applications of ECG-estimated age and gender to encourage further improvements of the state-of-the-art methodologies.
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Affiliation(s)
- Mohammed Yusuf Ansari
- Texas A&M University, College Station, TX, USA; Texas A&M University at Qatar, Doha, Qatar.
| | - Marwa Qaraqe
- Division of Information and Computing Technology, Hamad Bin Khalifa University, Doha, Qatar; Texas A&M University at Qatar, Doha, Qatar
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Asghar A, Qasim M, Noor F, Ashfaq UA, Tahir Ul Qamar M, Masoud MS, Bhatti R, Almatroudi A, Alrumaihi F, Allemailem KS. Systematic elucidation of the multi-target pharmacological mechanism of Terminalia arjuna against congestive cardiac failure via network pharmacology and molecular modelling approaches. Nat Prod Res 2023; 37:3733-3740. [PMID: 37665010 DOI: 10.1080/14786419.2023.2252565] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2023] [Revised: 08/12/2023] [Accepted: 08/23/2023] [Indexed: 09/05/2023]
Abstract
Congestive cardiac failure (CCF) is a pathophysiologic state when the heart is not able to maintain its cardiac output to meet the demand of metabolising tissues. CCF is responsible for approximately 2.9 million deaths worldwide. The heterogeneous nature of CCF draws the attention of researchers to find more enthralling and promising diagnostic and treatment options. Terminalia arjuna (Arjuna) is an evergreen, deciduous tree exhibited various astringent, anti-bacterial, and anti-microbial properties. T. arjuna is being used in various regions for anginal pain, hypertension, congestive heart failure, and dyslipidemia. Although previous in vitro studies have demonstrated the therapeutic potential of T. arjuna, the exact molecular mechanism underlying its protective effect on the heart remains unclear. In this study, a network pharmacology technique was used to explore the active ingredients, potential targets in T. arjuna for the treatment of CCF. In the framework of this study, we explored the active ingredient-target-pathway network and figured out that oleanolic acid, arjunolic acid, luteolin, kaempferol, cholesterol, ellagic acid 4-O-xylopyranoside 3,3'-dimethyl ether, and cyclohexyl (2,4-dimethyl phenyl) methanone contributed significantly to the development of CCF by affecting AKT1, MAPK14, TNF, IL6, ESR1, and HSP90AA1 genes. Molecular docking analysis further validated the activities of these compounds against potential targets. To sum up, integrated network pharmacology and docking analysis revealed that T. arjuna exerts its cardioprotective effect by acting on various signalling pathways, including the thyroid hormone, VEGF signalling pathway, AGE-RAGE signalling pathway in diabetic complications, HIF signalling pathway, sphingolipid signalling pathway, and oestrogen signalling pathways. Overall, this study provides valuable insights into the molecular mechanism of T. arjuna in CCF and highlights its potential as a promising preventive treatment for this condition.
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Affiliation(s)
- Aqsa Asghar
- Department of Bioinformatics and Biotechnology, Government College University, Faisalabad, Pakistan
| | - Muhammad Qasim
- Department of Bioinformatics and Biotechnology, Government College University, Faisalabad, Pakistan
| | - Fatima Noor
- Department of Bioinformatics and Biotechnology, Government College University, Faisalabad, Pakistan
| | - Usman Ali Ashfaq
- Department of Bioinformatics and Biotechnology, Government College University, Faisalabad, Pakistan
| | - Muhammad Tahir Ul Qamar
- Department of Bioinformatics and Biotechnology, Government College University, Faisalabad, Pakistan
| | - Muhammad Shareef Masoud
- Department of Bioinformatics and Biotechnology, Government College University, Faisalabad, Pakistan
| | - Rashid Bhatti
- National Centre of Excellence in Molecular Biology, The University of Punjab, Lahore, Pakistan
| | - Ahmad Almatroudi
- Department of Medical Laboratories, College of Applied Medical Sciences, Qassim University, Buraydah, Saudi Arabia
| | - Faris Alrumaihi
- Department of Medical Laboratories, College of Applied Medical Sciences, Qassim University, Buraydah, Saudi Arabia
| | - Khaled S Allemailem
- Department of Medical Laboratories, College of Applied Medical Sciences, Qassim University, Buraydah, Saudi Arabia
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Zeng W, Yuan C. Myocardial infarction detection using ITD, DWT and deterministic learning based on ECG signals. Cogn Neurodyn 2023; 17:941-964. [PMID: 37522048 PMCID: PMC10374507 DOI: 10.1007/s11571-022-09870-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2022] [Revised: 07/16/2022] [Accepted: 08/05/2022] [Indexed: 11/03/2022] Open
Abstract
Nowadays, cardiovascular diseases (CVD) is one of the prime causes of human mortality, which has received tremendous and elaborative research interests regarding the prevention issue. Myocardial ischemia is a kind of CVD which will lead to myocardial infarction (MI). The diagnostic criterion of MI is supplemented with clinical judgement and several electrocardiographic (ECG) or vectorcardiographic (VCG) programs. However the visual inspection of ECG or VCG signals by cardiologists is tedious, laborious and subjective. To overcome such disadvantages, numerous MI detection techniques including signal processing and artificial intelligence tools have been developed. In this study, we propose a novel technique for automatic detection of MI based on disparity of cardiac system dynamics and synthesis of the standard 12-lead and Frank XYZ leads. First, 12-lead ECG signals are synthesized with Frank XYZ leads to build a hybrid 4-dimensional cardiac vector, which is decomposed into a series of proper rotation components (PRCs) by using the intrinsic time-scale decomposition (ITD) method. The novel cardiac vector may fully reflect the pathological alterations provoked by MI and may be correlated to the disparity of cardiac system dynamics between healthy and MI subjects. ITD is employed to measure the variability of cardiac vector and the first PRCs are extracted as predominant PRCs which contain most of the cardiac vector's energy. Second, four levels discrete wavelet transform with third-order Daubechies (db3) wavelet function is employed to decompose the predominant PRCs into different frequency bands, which combines with three-dimensional phase space reconstruction to derive features. The properties associated with the cardiac system dynamics are preserved. Since the frequency components above 40 Hz are lack of use in ECG analysis, in order to reduce the feature dimension, the advisable sub-band (D4) is selected for feature acquisition. Third, neural networks are then used to model, identify and classify cardiac system dynamics between normal (healthy) and MI cardiac vector signals. The difference of cardiac system dynamics between healthy control and MI cardiac vector is computed and used for the detection of MI based on a bank of estimators. Finally, experiments are carried out on the PhysioNet PTB database to assess the effectiveness of the proposed method, in which conventional 12-lead and Frank XYZ leads ECG signal fragments from 148 patients with MI and 52 healthy controls were extracted. By using the tenfold cross-validation style, the achieved average classification accuracy is reported to be 98.20%. Results verify the effectiveness of the proposed method which can serve as a potential candidate for the automatic detection of MI in the clinical application.
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Affiliation(s)
- Wei Zeng
- School of Physics and Mechanical and Electrical Engineering, Longyan University, Longyan, 364012 People’s Republic of China
| | - Chengzhi Yuan
- Department of Mechanical, Industrial and Systems Engineering, University of Rhode Island, Kingston, RI 02881 USA
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Li Z, Zhang H. Fusing deep metric learning with KNN for 12-lead multi-labelled ECG classification. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2023.104849] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/28/2023]
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7
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Yao S, Zhang B, Fei X, Xiao M, Lu L, Liu D, Zhang S, Cui J. AI-Assisted Ultrasound for the Early Diagnosis of Antibody-Negative Autoimmune Thyroiditis. J Multidiscip Healthc 2023; 16:1801-1810. [PMID: 37404960 PMCID: PMC10315148 DOI: 10.2147/jmdh.s408117] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Accepted: 05/12/2023] [Indexed: 07/06/2023] Open
Abstract
The prevalence of antibody-negative chronic autoimmune thyroiditis (SN-CAT) is increasing. The early diagnosis of SN-CAT can effectively prevent its further development. Thyroid ultrasound can diagnose autoimmune thyroiditis and predict hypothyroidism. Primary hypothyroidism with a hypoechoic pattern suggested by thyroid ultrasound and negative thyroid serum antibodies is the main basis for the diagnosis of SN-CAT. However, for early SN-CAT, only hypoechoic thyroid changes and serological antibodies are currently available. This study explored how to achieve an accurate and early diagnosis of SN-CAT and prevent the development of SN-CAT combined with hypothyroidism. The diagnosis of a hypoechoic thyroid by artificial intelligence is expected to be a breakthrough in the accurate diagnosis of SN-CAT.
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Affiliation(s)
- Shengsheng Yao
- China Medical University - Department of Thyroid and Breast Surgery, Liaoning Provincial People’s Hospital, Shenyang, Liaoning Province, 110015, People’s Republic of China
| | - Bo Zhang
- Department of Science and Education, The 10th Division of Xinjiang Production and Construction Corps, Beitun General Hospital, Beitun City, Xinjiang Province, 831300, People’s Republic of China
| | - Xiang Fei
- Department of Thyroid and Breast Surgery, People’s Hospital of China Medical University (Liaoning Provincial People’s Hospital), Shenyang, Liaoning Province, 110015, People's Republic of China
| | - Mingming Xiao
- Department of Pathology, People’s Hospital of China Medical University (Liaoning Provincial People’s Hospital), Shenyang, Liaoning Province, 110015, People’s Republic of China
| | - Li Lu
- Department of Endocrinology, People’s Hospital of China Medical University (Liaoning Provincial People’s Hospital), Shenyang, Liaoning Province, 110015, People’s Republic of China
| | - Daming Liu
- Department of Ultrasound, People’s Hospital of China Medical University (Liaoning Provincial People’s Hospital), Shenyang, Liaoning Province, 110015, People’s Republic of China
| | - Siyuan Zhang
- Department of Thyroid and Breast Surgery, The 10th Division of Xinjiang Production and Construction Corps, Beitun General Hospital, Beitun City, Xinjiang Province, 831300, People’s Republic of China
| | - Jianchun Cui
- Department of Thyroid and Breast Surgery, People’s Hospital of China Medical University (Liaoning Provincial People’s Hospital), Shenyang, Liaoning Province, 110015, People's Republic of China
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Choi SH, Lee HG, Park SD, Bae JW, Lee W, Kim MS, Kim TH, Lee WK. Electrocardiogram-based deep learning algorithm for the screening of obstructive coronary artery disease. BMC Cardiovasc Disord 2023; 23:287. [PMID: 37286945 DOI: 10.1186/s12872-023-03326-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2022] [Accepted: 05/30/2023] [Indexed: 06/09/2023] Open
Abstract
BACKGROUND Information on electrocardiogram (ECG) has not been quantified in obstructive coronary artery disease (ObCAD), despite the deep learning (DL) algorithm being proposed as an effective diagnostic tool for acute myocardial infarction (AMI). Therefore, this study adopted a DL algorithm to suggest the screening of ObCAD from ECG. METHODS ECG voltage-time traces within a week from coronary angiography (CAG) were extracted for the patients who received CAG for suspected CAD in a single tertiary hospital from 2008 to 2020. After separating the AMI group, those were classified into ObCAD and non-ObCAD groups based on the CAG results. A DL-based model adopting ResNet was built to extract information from ECG data in the patients with ObCAD relative to those with non-ObCAD, and compared the performance with AMI. Moreover, subgroup analysis was conducted using ECG patterns of computer-assisted ECG interpretation. RESULTS The DL model demonstrated modest performance in suggesting the probability of ObCAD but excellent performance in detecting AMI. The AUC of the ObCAD model adopting 1D ResNet was 0.693 and 0.923 in detecting AMI. The accuracy, sensitivity, specificity, and F1 score of the DL model for screening ObCAD were 0.638, 0.639, 0.636, and 0.634, respectively, while the figures were up to 0.885, 0.769, 0.921, and 0.758 for detecting AMI, respectively. Subgroup analysis showed that the difference between normal and abnormal/borderline ECG groups was not notable. CONCLUSIONS ECG-based DL model showed fair performance for assessing ObCAD and it may serve as an adjunct to the pre-test probability in patients with suspected ObCAD during the initial evaluation. With further refinement and evaluation, ECG coupled with the DL algorithm may provide potential front-line screening support in the resource-intensive diagnostic pathways.
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Affiliation(s)
- Seong Huan Choi
- Department of Cardiology, School of Medicine, Inha University Hospital, Inha University, Incheon, Korea
| | - Hyun-Gye Lee
- School of Medicine, Inha University, Incheon, Korea
| | - Sang-Don Park
- Department of Cardiology, School of Medicine, Inha University Hospital, Inha University, Incheon, Korea
| | - Jang-Whan Bae
- Division of Cardiology, Department of Internal Medicine, Chungbuk National University College of Medicine, Cheongju, Korea
| | - Woojoo Lee
- Department of Public Health Sciences, Graduate School of Public Health, Seoul National University, Seoul, Korea
| | - Mi-Sook Kim
- Division of Clinical Epidemiology, Medical Research Collaborating Center, Biomedical Research Institution, Seoul National University Hospital, Seoul, Korea
| | - Tae-Hun Kim
- Department of Artificial Intelligence, Inha University, Incheon, Korea
| | - Won Kyung Lee
- Department of Prevention and Management, School of Medicine, Inha University Hospital, Inha University, 27 Inhang-Ro, Jung-Gu, Incheon, Korea.
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Bjerkén LV, Rønborg SN, Jensen MT, Ørting SN, Nielsen OW. Artificial intelligence enabled ECG screening for left ventricular systolic dysfunction: a systematic review. Heart Fail Rev 2023; 28:419-430. [PMID: 36344908 PMCID: PMC9640840 DOI: 10.1007/s10741-022-10283-1] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Accepted: 10/18/2022] [Indexed: 11/11/2022]
Abstract
Screening for left ventricular systolic dysfunction (LVSD), defined as reduced left ventricular ejection fraction (LVEF), deserves renewed interest as the medical treatment for the prevention and progression of heart failure improves. We aimed to review the updated literature to outline the potential and caveats of using artificial intelligence-enabled electrocardiography (AIeECG) as an opportunistic screening tool for LVSD.We searched PubMed and Cochrane for variations of the terms "ECG," "Heart Failure," "systolic dysfunction," and "Artificial Intelligence" from January 2010 to April 2022 and selected studies that reported the diagnostic accuracy and confounders of using AIeECG to detect LVSD.Out of 40 articles, we identified 15 relevant studies; eleven retrospective cohorts, three prospective cohorts, and one case series. Although various LVEF thresholds were used, AIeECG detected LVSD with a median AUC of 0.90 (IQR from 0.85 to 0.95), a sensitivity of 83.3% (IQR from 73 to 86.9%) and a specificity of 87% (IQR from 84.5 to 90.9%). AIeECG algorithms succeeded across a wide range of sex, age, and comorbidity and seemed especially useful in non-cardiology settings and when combined with natriuretic peptide testing. Furthermore, a false-positive AIeECG indicated a future development of LVSD. No studies investigated the effect on treatment or patient outcomes.This systematic review corroborates the arrival of a new generic biomarker, AIeECG, to improve the detection of LVSD. AIeECG, in addition to natriuretic peptides and echocardiograms, will improve screening for LVSD, but prospective randomized implementation trials with added therapy are needed to show cost-effectiveness and clinical significance.
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Affiliation(s)
- Laura Vindeløv Bjerkén
- Department of Clinical Medicine, University of Copenhagen, Blegdamsvej 3B, 2200, Copenhagen, Denmark.
| | - Søren Nicolaj Rønborg
- Department of Cardiology, Copenhagen University Hospital Bispebjerg, Copenhagen, Denmark
| | - Magnus Thorsten Jensen
- Department of Cardiology, Copenhagen University Hospital Amager and Hvidovre, Hvidovre, Denmark
- Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark
- William Harvey Research Institute, Queen Mary University Hospital, London, UK
| | - Silas Nyboe Ørting
- Department of Computer Science, University of Copenhagen, Copenhagen, Denmark
| | - Olav Wendelboe Nielsen
- Department of Clinical Medicine, University of Copenhagen, Blegdamsvej 3B, 2200, Copenhagen, Denmark
- Department of Cardiology, Copenhagen University Hospital Bispebjerg, Copenhagen, Denmark
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Zhang T, Chen W, Chen X. Identifying epileptic EEGs and congestive heart failure ECGs under unified framework of wavelet scattering transform, bidirectional weighted (2D)2PCA and KELM. Biocybern Biomed Eng 2023. [DOI: 10.1016/j.bbe.2023.01.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
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11
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Classification of cardiac electrical signals between patients with myocardial infarction and normal subjects by using nonlinear dynamics features and different classification models. Biomed Signal Process Control 2023. [DOI: 10.1016/j.bspc.2022.104105] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Zitouni MS, Lih Oh S, Vicnesh J, Khandoker A, Acharya UR. Automated recognition of major depressive disorder from cardiovascular and respiratory physiological signals. Front Psychiatry 2022; 13:970993. [PMID: 36569627 PMCID: PMC9780587 DOI: 10.3389/fpsyt.2022.970993] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Accepted: 11/21/2022] [Indexed: 12/14/2022] Open
Abstract
Major Depressive Disorder (MDD) is a neurohormonal disorder that causes persistent negative thoughts, mood and feelings, often accompanied with suicidal ideation (SI). Current clinical diagnostic approaches are solely based on psychiatric interview questionnaires. Thus, a computational intelligence tool for the automated detection of MDD with and without suicidal ideation is presented in this study. Since MDD is proven to affect cardiovascular and respiratory systems, the aim of the study is to automatically identify the disorder severity in MDD patients using corresponding multi-modal physiological signals, including electrocardiogram (ECG), finger photoplethysmography (PPG) and respiratory signals (RSP). Data from 88 subjects were used in this study, out of which 25 were MDD patients without SI (MDDSI-), 18 MDD patients with SI (MDDSI+), and 45 normal subjects. Multi-modal physiological signals were acquired from each subject, including ECG, RSP, and PPG signals, and then pre-processed. Discrete wavelet transform (DWT) was applied to the signals, which were decomposed up to six levels, and then eleven nonlinear features were extracted. The features were ranked according to the analysis of variance test and Marginal Fisher Analysis was employed to reduce the feature set, after which the reduced features were ranked again to select the most discriminatory features. Support vector machine with polynomial radial basis function (SVM-RBF) as well as k-nearest neighbor (KNN) classifiers were used to classify the significant features. The performance of the classifiers was evaluated in a 10-fold cross validation scheme. The best performance achieved for the classification of MDDSI+ patients was up to 85.2%, by using selected features from the obtained multi-modal signals with SVM-RBF, while it was up to 96.6% for the detection of MDD patients against healthy subjects. This work is a step toward the utilization of automated tools in diagnostics and monitoring of MDD patients in a personalized and wearable healthcare system.
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Affiliation(s)
- M. Sami Zitouni
- College of Engineering & IT, University of Dubai, Dubai, United Arab Emirates
- Health Engineering Innovation Center, Khalifa University, Abu Dhabi, United Arab Emirates
| | - Shu Lih Oh
- School of Engineering, Ngee Ann Polytechnic, Singapore, Singapore
| | - Jahmunah Vicnesh
- School of Engineering, Ngee Ann Polytechnic, Singapore, Singapore
| | - Ahsan Khandoker
- Health Engineering Innovation Center, Khalifa University, Abu Dhabi, United Arab Emirates
- Department of Biomedical Engineering, Khalifa University, Abu Dhabi, United Arab Emirates
| | - U. Rajendra Acharya
- School of Engineering, Ngee Ann Polytechnic, Singapore, Singapore
- Department Bioinformatics and Medical Engineering, Asia University, Taichung City, Taiwan
- International Research Organization for Advanced Science and Technology, Kumamoto University, Kumamoto, Japan
- Department of Biomedical Engineering, School of Science and Technology, SUSS University, Singapore
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13
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Yang J, Xi C. The Diagnosis of Congestive Heart Failure Based on Generalized Multiscale Entropy-Wavelet Leaders. ENTROPY (BASEL, SWITZERLAND) 2022; 24:1763. [PMID: 36554169 PMCID: PMC9778204 DOI: 10.3390/e24121763] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/13/2022] [Revised: 11/29/2022] [Accepted: 11/30/2022] [Indexed: 06/17/2023]
Abstract
Congestive heart failure (CHF) is a chronic heart condition associated with debilitating symptoms that can lead to mortality. The electrocardiogram (ECG) is a noninvasive and simple diagnostic method that can show detectable changes in CHF. However, manual diagnosis of ECG signals is often erroneous due to the small amplitude and duration of the ECG signals. This paper presents a CHF diagnosis method based on generalized multiscale entropy (MSE)-wavelet leaders (WL) and extreme learning machine (ELM). Firstly, ECG signals from normal sinus rhythm (NSR) and congestive heart failure (CHF) patients are pre-processed. Then, parameters such as segmentation time and scale factor are chosen, and the multifractal spectrum features and number of ELM hidden layer nodes are determined. Two different data sets (A, B) were used for training and testing. In both sets, the balanced data set (B) had the highest accuracy of 99.72%, precision, sensitivity, specificity, and F1 score of 99.46%, 100%, 99.44%, and 99.73%, respectively. The unbalanced data set (A) attained an accuracy of 99.56%, precision of 99.44%, sensitivity of 99.81%, specificity of 99.17%, and F1 score of 99.62%. Finally, increasing the number of ECG segments and different algorithms validated the probability of detection of the unbalanced data set. The results indicate that our proposed method requires a lower number of ECG segments and does not require the detection of R waves. Moreover, the method can improve the probability of detection of unbalanced data sets and provide diagnostic assistance to cardiologists by providing a more objective and faster interpretation of ECG signals.
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Affiliation(s)
- Juanjuan Yang
- Ocean College, Jiangsu University of Science and Technology, Zhenjiang 212100, China
| | - Caiping Xi
- College of Automation, Jiangsu University of Science and Technology, Zhenjiang 212100, China
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Susič D, Poglajen G, Gradišek A. Identification of decompensation episodes in chronic heart failure patients based solely on heart sounds. Front Cardiovasc Med 2022; 9:1009821. [DOI: 10.3389/fcvm.2022.1009821] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2022] [Accepted: 10/26/2022] [Indexed: 11/17/2022] Open
Abstract
Decompensation episodes in chronic heart failure patients frequently result in unplanned outpatient or emergency room visits or even hospitalizations. Early detection of these episodes in their pre-symptomatic phase would likely enable the clinicians to manage this patient cohort with the appropriate modification of medical therapy which would in turn prevent the development of more severe heart failure decompensation thus avoiding the need for heart failure-related hospitalizations. Currently, heart failure worsening is recognized by the clinicians through characteristic changes of heart failure-related symptoms and signs, including the changes in heart sounds. The latter has proven to be largely unreliable as its interpretation is highly subjective and dependent on the clinicians’ skills and preferences. Previous studies have indicated that the algorithms of artificial intelligence are promising in distinguishing the heart sounds of heart failure patients from those of healthy individuals. In this manuscript, we focus on the analysis of heart sounds of chronic heart failure patients in their decompensated and recompensated phase. The data was recorded on 37 patients using two types of electronic stethoscopes. Using a combination of machine learning approaches, we obtained up to 72% classification accuracy between the two phases, which is better than the accuracy of the interpretation by cardiologists, which reached 50%. Our results demonstrate that machine learning algorithms are promising in improving early detection of heart failure decompensation episodes.
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A novel technique for the detection of myocardial dysfunction using ECG signals based on CEEMD, DWT, PSR and neural networks. Artif Intell Rev 2022. [DOI: 10.1007/s10462-022-10262-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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16
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Lin W, Jia S, Chen Y, Shi H, Zhao J, Li Z, Wu Y, Jiang H, Zhang Q, Wang W, Chen Y, Feng C, Xia S. Korotkoff sounds dynamically reflect changes in cardiac function based on deep learning methods. Front Cardiovasc Med 2022; 9:940615. [PMID: 36093170 PMCID: PMC9458936 DOI: 10.3389/fcvm.2022.940615] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2022] [Accepted: 07/18/2022] [Indexed: 11/24/2022] Open
Abstract
Korotkoff sounds (K-sounds) have been around for over 100 years and are considered the gold standard for blood pressure (BP) measurement. K-sounds are also unique for the diagnosis and treatment of cardiovascular diseases; however, their efficacy is limited. The incidences of heart failure (HF) are increasing, which necessitate the development of a rapid and convenient pre-hospital screening method. In this review, we propose a deep learning (DL) method and the possibility of using K-methods to predict cardiac function changes for the detection of cardiac dysfunctions.
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Affiliation(s)
- Wenting Lin
- Department of Cardiology, The Fourth Affiliated Hospital, Zhejiang University School of Medicine, Yiwu, China
| | - Sixiang Jia
- Department of Cardiology, The Fourth Affiliated Hospital, Zhejiang University School of Medicine, Yiwu, China
| | - Yiwen Chen
- Department of Cardiology, The Fourth Affiliated Hospital, Zhejiang University School of Medicine, Yiwu, China
| | - Hanning Shi
- Department of Anime and Comics, Hangzhou Normal University, Hangzhou, China
| | - Jianqiang Zhao
- Department of Cardiology, The Fourth Affiliated Hospital, Zhejiang University School of Medicine, Yiwu, China
| | - Zhe Li
- Department of Cardiology, The Fourth Affiliated Hospital, Zhejiang University School of Medicine, Yiwu, China
| | - Yiteng Wu
- Department of Cardiology, The Fourth Affiliated Hospital, Zhejiang University School of Medicine, Yiwu, China
| | - Hangpan Jiang
- Department of Cardiology, The Fourth Affiliated Hospital, Zhejiang University School of Medicine, Yiwu, China
| | - Qi Zhang
- Department of Cardiology, The Fourth Affiliated Hospital, Zhejiang University School of Medicine, Yiwu, China
| | - Wei Wang
- Department of Cardiology, The Fourth Affiliated Hospital, Zhejiang University School of Medicine, Yiwu, China
| | - Yayu Chen
- Department of Cardiology, The Fourth Affiliated Hospital, Zhejiang University School of Medicine, Yiwu, China
| | - Chao Feng
- Department of Cardiology, The Fourth Affiliated Hospital, Zhejiang University School of Medicine, Yiwu, China
| | - Shudong Xia
- Department of Cardiology, The Fourth Affiliated Hospital, Zhejiang University School of Medicine, Yiwu, China
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Bridge J, Fu L, Lin W, Xue Y, Lip GYH, Zheng Y. Artificial intelligence to detect abnormal heart rhythm from scanned electrocardiogram tracings. J Arrhythm 2022; 38:425-431. [PMID: 35785392 PMCID: PMC9237304 DOI: 10.1002/joa3.12707] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2021] [Revised: 03/03/2022] [Accepted: 03/19/2022] [Indexed: 11/17/2022] Open
Abstract
Background Electrocardiogram (ECG) interpretation is an integral part of the clinical ECG workflow; however, this process is often time-consuming and labor-intensive. We aim to develop a rapid, inexpensive means to detect abnormal ECGs using artificial intelligence (AI) from scanned ECG printouts. Methods The study included 1172 12-lead ECG scans performed in 1172 individuals from a community in Guangzhou, China; 878 (74.9%) were diagnosed with sinus rhythm, and the remaining 294 (25.1%) with abnormal rhythms. A deep learning model consisting of a convolutional neural network based on InceptionV3 and a fully connected layer followed by a GEV activation was trained to classify scanned tracings as either normal or abnormal. Results In a hold-out testing set, the model achieved a area under curve (AUC), sensitivity, specificity, PPV, and NPV of 0.932 (95% confidence interval [CI]: 0.890, 0.976), 0.816 (95% CI: 0.657, 0.923), 0.993 (95% CI: 0.959, 1.0), 0.969 (95% CI: 0.838, 0.999), and 0.950 (95% CI: 0.90, 0.980) respectively, when using a probability threshold of 0.5. When compared with a physiological expert, these results show comparable performance with a statistically significant increase in specificity and a non-significant decrease in sensitivity at the 95% level. Conclusions We have developed a rapid, inexpensive, accurate means to detect abnormal ECGs using AI. Easy and accurate identification of such "abnormal" ECGs could allow the mass automated review of ECGs in community settings where abnormal ones could be flagged using AI for detailed clinical review by healthcare professionals.
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Affiliation(s)
- Joshua Bridge
- Department of Eye and Vision Science, Institute of Life Course and Medical SciencesUniversity of LiverpoolLiverpoolUK
| | - Lu Fu
- Department of Cardiology, Guangdong Cardiovascular Institute, Guangdong Provincial People's HospitalGuangdong Academy of Medical SciencesGuangzhouChina
| | - Weidong Lin
- Department of Cardiology, Guangdong Cardiovascular Institute, Guangdong Provincial People's HospitalGuangdong Academy of Medical SciencesGuangzhouChina
| | - Yumei Xue
- Department of Cardiology, Guangdong Cardiovascular Institute, Guangdong Provincial People's HospitalGuangdong Academy of Medical SciencesGuangzhouChina
| | - Gregory Y. H. Lip
- Liverpool Centre for Cardiovascular ScienceUniversity of Liverpool and Liverpool Heart & Chest HospitalLiverpoolUK
| | - Yalin Zheng
- Department of Eye and Vision Science, Institute of Life Course and Medical SciencesUniversity of LiverpoolLiverpoolUK
- Liverpool Centre for Cardiovascular ScienceUniversity of Liverpool and Liverpool Heart & Chest HospitalLiverpoolUK
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18
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Zheng Y, Guo X, Wang Y, Qin J, Lv F. A multi-scale and multi-domain heart sound feature-based machine learning model for ACC/AHA heart failure stage classification. Physiol Meas 2022; 43. [PMID: 35512699 DOI: 10.1088/1361-6579/ac6d40] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2022] [Accepted: 05/05/2022] [Indexed: 11/11/2022]
Abstract
OBJECTIVE Heart sounds can reflect detrimental changes in cardiac mechanical activity that are common pathological characteristics of chronic heart failure (CHF). The ACC/AHA heart failure (HF) stage classification is essential for clinical decision-making and the management of CHF. Herein, a machine learning model that makes use of multi-scale and multi-domain heart sound features was proposed to provide an objective aid for ACC/AHA HF stage classification. APPROACH A dataset containing phonocardiogram (PCG) signals from 275 subjects was obtained from two medical institutions and used in this study. Complementary ensemble empirical mode decomposition and tunable-Q wavelet transform were used to construct self-adaptive sub-sequences and multi-level sub-band signals for PCG signals. Time-domain, frequency-domain and nonlinear feature extraction were then applied to the original PCG signal, heart sound sub-sequences and sub-band signals to construct multi-scale and multi-domain heart sound features. The features selected via the least absolute shrinkage and selection operator were fed into a machine learning classifier for ACC/AHA HF stage classification. Finally, mainstream machine learning classifiers, including least-squares support vector machine (LS-SVM), deep belief network (DBN) and random forest (RF), were compared to determine the optimal model. MAIN RESULTS The results showed that the LS-SVM, which utilized a combination of multi-scale and multi-domain features, achieved better classification performance than the DBN and RF using multi-scale or multi-domain features alone or together, with average sensitivity, specificity, and accuracy of 0.821, 0.955 and 0.820 on the testing set, respectively. SIGNIFICANCE PCG signal analysis provides efficient measurement information regarding CHF severity and is a promising noninvasive method for ACC/AHA HF stage classification.
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Affiliation(s)
- Yineng Zheng
- Chongqing Medical University, 1 Yixueyuan Road, Yuzhong District, Chongqing 400016, P.R.China, Chongqing, Chongqing, 400016, CHINA
| | - Xingming Guo
- Bioengineering College, Chongqing University, Chongqing 400044, Chongqing, 400044, CHINA
| | - Yingying Wang
- Chongqing Medical University, 1 Yixueyuan Road, Yuzhong District, Chongqing 400016, P.R.China, Chongqing, Chongqing, 400016, CHINA
| | - Jian Qin
- Chongqing Medical University, 1 Yixueyuan Road, Yuzhong District, Chongqing 400016, P.R.China, Chongqing, Chongqing, 400016, CHINA
| | - Fajin Lv
- Chongqing Medical University, 1 Yixueyuan Road, Yuzhong District, Chongqing 400016, P.R.China, Chongqing, 400016, CHINA
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Liu T, Si Y, Yang W, Huang J, Yu Y, Zhang G, Zhou R. Inter-Patient Congestive Heart Failure Detection Using ECG-Convolution-Vision Transformer Network. SENSORS (BASEL, SWITZERLAND) 2022; 22:3283. [PMID: 35590972 PMCID: PMC9104351 DOI: 10.3390/s22093283] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/21/2022] [Revised: 04/16/2022] [Accepted: 04/20/2022] [Indexed: 12/01/2022]
Abstract
An attack of congestive heart failure (CHF) can cause symptoms such as difficulty breathing, dizziness, or fatigue, which can be life-threatening in severe cases. An electrocardiogram (ECG) is a simple and economical method for diagnosing CHF. Due to the inherent complexity of ECGs and the subtle differences in the ECG waveform, misdiagnosis happens often. At present, the research on automatic CHF detection methods based on machine learning has become a research hotspot. However, the existing research focuses on an intra-patient experimental scheme and lacks the performance evaluation of working under noise, which cannot meet the application requirements. To solve the above issues, we propose a novel method to identify CHF using the ECG-Convolution-Vision Transformer Network (ECVT-Net). The algorithm combines the characteristics of a Convolutional Neural Network (CNN) and a Vision Transformer, which can automatically extract high-dimensional abstract features of ECGs with simple pre-processing. In this study, the model reached an accuracy of 98.88% for the inter-patient scheme. Furthermore, we added different degrees of noise to the original ECGs to verify the model's noise robustness. The model's performance in the above experiments proved that it could effectively identify CHF ECGs and can work under certain noise.
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Affiliation(s)
- Taotao Liu
- School of Electronic and Information Engineering (SEIE), Zhuhai College of Science and Technology, Zhuhai 519041, China; (T.L.); (Y.Y.); (G.Z.); (R.Z.)
- College of Communication Engineering, Jilin University, Changchun 130012, China;
| | - Yujuan Si
- School of Electronic and Information Engineering (SEIE), Zhuhai College of Science and Technology, Zhuhai 519041, China; (T.L.); (Y.Y.); (G.Z.); (R.Z.)
- College of Communication Engineering, Jilin University, Changchun 130012, China;
| | - Weiyi Yang
- College of Communication Engineering, Jilin University, Changchun 130012, China;
- Department of Biomedical Engineering, McGill University, Montreal, QC H3A 2B4, Canada
| | - Jiaqi Huang
- College of Computer Science and Technology, Jilin University, Changchun 130012, China;
| | - Yongheng Yu
- School of Electronic and Information Engineering (SEIE), Zhuhai College of Science and Technology, Zhuhai 519041, China; (T.L.); (Y.Y.); (G.Z.); (R.Z.)
- College of Communication Engineering, Jilin University, Changchun 130012, China;
| | - Gengbo Zhang
- School of Electronic and Information Engineering (SEIE), Zhuhai College of Science and Technology, Zhuhai 519041, China; (T.L.); (Y.Y.); (G.Z.); (R.Z.)
- College of Communication Engineering, Jilin University, Changchun 130012, China;
| | - Rongrong Zhou
- School of Electronic and Information Engineering (SEIE), Zhuhai College of Science and Technology, Zhuhai 519041, China; (T.L.); (Y.Y.); (G.Z.); (R.Z.)
- College of Communication Engineering, Jilin University, Changchun 130012, China;
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20
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Gudigar A, Raghavendra U, Samanth J, Dharmik C, Gangavarapu MR, Nayak K, Ciaccio EJ, Tan RS, Molinari F, Acharya UR. Novel Hypertrophic Cardiomyopathy Diagnosis Index Using Deep Features and Local Directional Pattern Techniques. J Imaging 2022; 8:jimaging8040102. [PMID: 35448229 PMCID: PMC9030738 DOI: 10.3390/jimaging8040102] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Revised: 03/22/2022] [Accepted: 03/28/2022] [Indexed: 02/04/2023] Open
Abstract
Hypertrophic cardiomyopathy (HCM) is a genetic disorder that exhibits a wide spectrum of clinical presentations, including sudden death. Early diagnosis and intervention may avert the latter. Left ventricular hypertrophy on heart imaging is an important diagnostic criterion for HCM, and the most common imaging modality is heart ultrasound (US). The US is operator-dependent, and its interpretation is subject to human error and variability. We proposed an automated computer-aided diagnostic tool to discriminate HCM from healthy subjects on US images. We used a local directional pattern and the ResNet-50 pretrained network to classify heart US images acquired from 62 known HCM patients and 101 healthy subjects. Deep features were ranked using Student’s t-test, and the most significant feature (SigFea) was identified. An integrated index derived from the simulation was defined as 100·log10(SigFea/2) in each subject, and a diagnostic threshold value was empirically calculated as the mean of the minimum and maximum integrated indices among HCM and healthy subjects, respectively. An integrated index above a threshold of 0.5 separated HCM from healthy subjects with 100% accuracy in our test dataset.
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Affiliation(s)
- Anjan Gudigar
- Department of Instrumentation and Control Engineering, Manipal Institute of Technology, Manipal Academy of Higher Education, Manipal 576104, India; (A.G.); (C.D.); (M.R.G.)
| | - U. Raghavendra
- Department of Instrumentation and Control Engineering, Manipal Institute of Technology, Manipal Academy of Higher Education, Manipal 576104, India; (A.G.); (C.D.); (M.R.G.)
- Correspondence:
| | - Jyothi Samanth
- Department of Cardiovascular Technology, Manipal College of Health Professions, Manipal Academy of Higher Education, Manipal 576104, India; (J.S.); (K.N.)
| | - Chinmay Dharmik
- Department of Instrumentation and Control Engineering, Manipal Institute of Technology, Manipal Academy of Higher Education, Manipal 576104, India; (A.G.); (C.D.); (M.R.G.)
| | - Mokshagna Rohit Gangavarapu
- Department of Instrumentation and Control Engineering, Manipal Institute of Technology, Manipal Academy of Higher Education, Manipal 576104, India; (A.G.); (C.D.); (M.R.G.)
| | - Krishnananda Nayak
- Department of Cardiovascular Technology, Manipal College of Health Professions, Manipal Academy of Higher Education, Manipal 576104, India; (J.S.); (K.N.)
| | - Edward J. Ciaccio
- Department of Medicine, Division of Cardiology, Columbia University Medical Center, New York, NY 10032, USA;
| | - Ru-San Tan
- Department of Cardiology, National Heart Centre Singapore, Singapore 169609, Singapore;
- Duke-NUS Medical School, Singapore 169857, Singapore
| | - Filippo Molinari
- Department of Electronics and Telecommunications, Politecnico di Torino, 10129 Torino, Italy;
| | - U. Rajendra Acharya
- School of Engineering, Ngee Ann Polytechnic, Clementi, Singapore 599489, Singapore;
- Department of Biomedical Informatics and Medical Engineering, Asia University, Taichung 41354, Taiwan
- International Research Organization for Advanced Science and Technology (IROAST), Kumamoto University, Kumamoto 8608555, Japan
- Department of Biomedical Engineering, School of Science and Technology, SUSS University, Singapore 599494, Singapore
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21
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Chen SW, Wang SL, Qi XZ, Samuri SM, Yang C. Review of ECG detection and classification based on deep learning: Coherent taxonomy, motivation, open challenges and recommendations. Biomed Signal Process Control 2022. [DOI: 10.1016/j.bspc.2022.103493] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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22
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Chang CH, Lin CS, Luo YS, Lee YT, Lin C. Electrocardiogram-Based Heart Age Estimation by a Deep Learning Model Provides More Information on the Incidence of Cardiovascular Disorders. Front Cardiovasc Med 2022; 9:754909. [PMID: 35211522 PMCID: PMC8860826 DOI: 10.3389/fcvm.2022.754909] [Citation(s) in RCA: 29] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2021] [Accepted: 01/05/2022] [Indexed: 11/19/2022] Open
Abstract
OBJECTIVE The biological age progression of the heart varies from person to person. We developed a deep learning model (DLM) to predict the biological age via ECG to explore its contribution to future cardiovascular diseases (CVDs). METHODS There were 71,741 cases ranging from 20 to 80 years old recruited from the health examination center. The development set used 32,707 cases to train the DLM for estimating the ECG-age, and 8,295 cases were used as the tuning set. The validation set included 30,469 ECGs to follow the outcomes, including all-cause mortality, cardiovascular-cause mortality, heart failure (HF), diabetes mellitus (DM), chronic kidney disease (CKD), acute myocardial infarction (AMI), stroke (STK), coronary artery disease (CAD), atrial fibrillation (AF), and hypertension (HTN). Two independent external validation sets (SaMi-Trop and CODE15) were also used to validate our DLM. RESULTS The mean absolute errors of chronologic age and ECG-age was 6.899 years (r = 0.822). The higher difference between ECG-age and chronological age was related to more comorbidities and abnormal ECG rhythm. The cases with the difference of more than 7 years had higher risk on the all-cause mortality [hazard ratio (HR): 1.61, 95% CI: 1.23-2.12], CV-cause mortality (HR: 3.49, 95% CI: 1.74-7.01), HF (HR: 2.79, 95% CI: 2.25-3.45), DM (HR: 1.70, 95% CI: 1.53-1.89), CKD (HR: 1.67, 95% CI: 1.41-1.97), AMI (HR: 1.76, 95% CI: 1.20-2.57), STK (HR: 1.65, 95% CI: 1.42-1.92), CAD (HR: 1.24, 95% CI: 1.12-1.37), AF (HR: 2.38, 95% CI: 1.86-3.04), and HTN (HR: 1.67, 95% CI: 1.51-1.85). The external validation sets also validated that an ECG-age >7 years compare to chronologic age had 3.16-fold risk (95% CI: 1.72-5.78) and 1.59-fold risk (95% CI: 1.45-1.74) on all-cause mortality in SaMi-Trop and CODE15 cohorts. The ECG-age significantly contributed additional information on heart failure, stroke, coronary artery disease, and atrial fibrillation predictions after considering all the known risk factors. CONCLUSIONS The ECG-age estimated via DLM provides additional information for CVD incidence. Older ECG-age is correlated with not only on mortality but also on other CVDs compared with chronological age.
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Affiliation(s)
- Chiao-Hsiang Chang
- Division of Cardiology, Department of Internal Medicine, Tri-Service General Hospital, National Defense Medical Center, Taipei, Taiwan
| | - Chin-Sheng Lin
- Division of Cardiology, Department of Internal Medicine, Tri-Service General Hospital, National Defense Medical Center, Taipei, Taiwan
| | - Yu-Sheng Luo
- Graduate Institute of Life Sciences, National Defense Medical Center, Taipei, Taiwan
| | - Yung-Tsai Lee
- Division of Cardiovascular Surgery, Cheng Hsin Rehabilitation and Medical Center, Taipei, Taiwan
| | - Chin Lin
- Graduate Institute of Life Sciences, National Defense Medical Center, Taipei, Taiwan
- School of Medicine, National Defense Medical Center, Taipei, Taiwan
- School of Public Health, National Defense Medical Center, Taipei, Taiwan
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Kusuma S, Jothi K. ECG signals-based automated diagnosis of congestive heart failure using Deep CNN and LSTM architecture. Biocybern Biomed Eng 2022. [DOI: 10.1016/j.bbe.2022.02.003] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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Jiao Y, Yuan J, Sodimu OM, Qiang Y, Ding Y. Deep Neural Network-Aided Histopathological Analysis of Myocardial Injury. Front Cardiovasc Med 2022; 8:724183. [PMID: 35083295 PMCID: PMC8784602 DOI: 10.3389/fcvm.2021.724183] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2021] [Accepted: 12/17/2021] [Indexed: 11/13/2022] Open
Abstract
Deep neural networks have become the mainstream approach for analyzing and interpreting histology images. In this study, we established and validated an interpretable DNN model to assess endomyocardial biopsy (EMB) data of patients with myocardial injury. Deep learning models were used to extract features and classify EMB histopathological images of heart failure cases diagnosed with either ischemic cardiomyopathy or idiopathic dilated cardiomyopathy and non-failing cases (organ donors without a history of heart failure). We utilized the gradient-weighted class activation mapping (Grad-CAM) technique to emphasize injured regions, providing an entry point to assess the dominant morphology in the process of a comprehensive evaluation. To visualize clustered regions of interest (ROI), we utilized uniform manifold approximation and projection (UMAP) embedding for dimension reduction. We further implemented a multi-model ensemble mechanism to improve the quantitative metric (area under the receiver operating characteristic curve, AUC) to 0.985 and 0.992 on ROI-level and case-level, respectively, outperforming the achievement of 0.971 ± 0.017 and 0.981 ± 0.020 based on the sub-models. Collectively, this new methodology provides a robust and interpretive framework to explore local histopathological patterns, facilitating the automatic and high-throughput quantification of cardiac EMB analysis.
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Tadesse GA, Javed H, Weldemariam K, Liu Y, Liu J, Chen J, Zhu T. DeepMI: Deep multi-lead ECG fusion for identifying myocardial infarction and its occurrence-time. Artif Intell Med 2021; 121:102192. [PMID: 34763807 DOI: 10.1016/j.artmed.2021.102192] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2021] [Revised: 07/07/2021] [Accepted: 10/05/2021] [Indexed: 11/16/2022]
Abstract
Myocardial Infarction (MI) has the highest mortality of all cardiovascular diseases (CVDs). Detection of MI and information regarding its occurrence-time in particular, would enable timely interventions that may improve patient outcomes, thereby reducing the global rise in CVD deaths. Electrocardiogram (ECG) recordings are currently used to screen MI patients. However, manual inspection of ECGs is time-consuming and prone to subjective bias. Machine learning methods have been adopted for automated ECG diagnosis, but most approaches require extraction of ECG beats or consider leads independently of one another. We propose an end-to-end deep learning approach, DeepMI, to classify MI from Normal cases as well as identifying the time-occurrence of MI (defined as Acute, Recent and Old), using a collection of fusion strategies on 12 ECG leads at data-, feature-, and decision-level. In order to minimise computational overhead, we employ transfer learning using existing computer vision networks. Moreover, we use recurrent neural networks to encode the longitudinal information inherent in ECGs. We validated DeepMI on a dataset collected from 17,381 patients, in which over 323,000 samples were extracted per ECG lead. We were able to classify Normal cases as well as Acute, Recent and Old onset cases of MI, with AUROCs of 96.7%, 82.9%, 68.6% and 73.8%, respectively. We have demonstrated a multi-lead fusion approach to detect the presence and occurrence-time of MI. Our end-to-end framework provides flexibility for different levels of multi-lead ECG fusion and performs feature extraction via transfer learning.
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Affiliation(s)
- Girmaw Abebe Tadesse
- Department of Engineering, University of Oxford, Oxford, United Kingdom; IBM Research, Kenya.
| | - Hamza Javed
- Department of Engineering, University of Oxford, Oxford, United Kingdom
| | | | - Yong Liu
- Department of Cardiology, Guangdong Cardiovascular Institute, Guangdong Provincial Key Laboratory of Coronary Disease, Guangdong Provincial People's Hospital, University of Technology, Guangzhou, China
| | - Jin Liu
- Department of Cardiology, Guangdong Cardiovascular Institute, Guangdong Provincial Key Laboratory of Coronary Disease, Guangdong Provincial People's Hospital, University of Technology, Guangzhou, China
| | - Jiyan Chen
- Department of Cardiology, Guangdong Cardiovascular Institute, Guangdong Provincial Key Laboratory of Coronary Disease, Guangdong Provincial People's Hospital, University of Technology, Guangzhou, China
| | - Tingting Zhu
- Department of Engineering, University of Oxford, Oxford, United Kingdom
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26
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Grün D, Rudolph F, Gumpfer N, Hannig J, Elsner LK, von Jeinsen B, Hamm CW, Rieth A, Guckert M, Keller T. Identifying Heart Failure in ECG Data With Artificial Intelligence-A Meta-Analysis. Front Digit Health 2021; 2:584555. [PMID: 34713056 PMCID: PMC8521986 DOI: 10.3389/fdgth.2020.584555] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2020] [Accepted: 12/29/2020] [Indexed: 12/21/2022] Open
Abstract
Introduction: Electrocardiography (ECG) is a quick and easily accessible method for diagnosis and screening of cardiovascular diseases including heart failure (HF). Artificial intelligence (AI) can be used for semi-automated ECG analysis. The aim of this evaluation was to provide an overview of AI use in HF detection from ECG signals and to perform a meta-analysis of available studies. Methods and Results: An independent comprehensive search of the PubMed and Google Scholar database was conducted for articles dealing with the ability of AI to predict HF based on ECG signals. Only original articles published in peer-reviewed journals were considered. A total of five reports including 57,027 patients and 579,134 ECG datasets were identified including two sets of patient-level data and three with ECG-based datasets. The AI-processed ECG data yielded areas under the receiver operator characteristics curves between 0.92 and 0.99 to identify HF with higher values in ECG-based datasets. Applying a random-effects model, an sROC of 0.987 was calculated. Using the contingency tables led to diagnostic odds ratios ranging from 3.44 [95% confidence interval (CI) = 3.12–3.76] to 13.61 (95% CI = 13.14–14.08) also with lower values in patient-level datasets. The meta-analysis diagnostic odds ratio was 7.59 (95% CI = 5.85–9.34). Conclusions: The present meta-analysis confirms the ability of AI to predict HF from standard 12-lead ECG signals underlining the potential of such an approach. The observed overestimation of the diagnostic ability in artificial ECG databases compared to patient-level data stipulate the need for robust prospective studies.
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Affiliation(s)
- Dimitri Grün
- Department of Internal Medicine I, Cardiology, Justus-Liebig University Giessen, Giessen, Germany
| | - Felix Rudolph
- Department of Internal Medicine I, Cardiology, Justus-Liebig University Giessen, Giessen, Germany
| | - Nils Gumpfer
- Cognitive Information Systems, KITE - Kompetenzzentrum für Informationstechnologie, Technische Hochschule Mittelhessen - University of Applied Sciences, Friedberg, Germany
| | - Jennifer Hannig
- Cognitive Information Systems, KITE - Kompetenzzentrum für Informationstechnologie, Technische Hochschule Mittelhessen - University of Applied Sciences, Friedberg, Germany
| | - Laura K Elsner
- Department of Internal Medicine I, Cardiology, Justus-Liebig University Giessen, Giessen, Germany
| | - Beatrice von Jeinsen
- Department of Cardiology, Kerckhoff Heart and Thorax Center, Bad Nauheim, Germany
| | - Christian W Hamm
- Department of Internal Medicine I, Cardiology, Justus-Liebig University Giessen, Giessen, Germany.,Department of Cardiology, Kerckhoff Heart and Thorax Center, Bad Nauheim, Germany
| | - Andreas Rieth
- Department of Cardiology, Kerckhoff Heart and Thorax Center, Bad Nauheim, Germany
| | - Michael Guckert
- Cognitive Information Systems, KITE - Kompetenzzentrum für Informationstechnologie, Technische Hochschule Mittelhessen - University of Applied Sciences, Friedberg, Germany.,Department of MND - Mathematik, Naturwissenschaften und Datenverarbeitung, Technische Hochschule Mittelhessen - University of Applied Sciences, Friedberg, Germany
| | - Till Keller
- Department of Internal Medicine I, Cardiology, Justus-Liebig University Giessen, Giessen, Germany.,Department of Cardiology, Kerckhoff Heart and Thorax Center, Bad Nauheim, Germany
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Haleem MS, Castaldo R, Pagliara SM, Petretta M, Salvatore M, Franzese M, Pecchia L. Time adaptive ECG driven cardiovascular disease detector. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.102968] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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28
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Chan YM, Ng E, Jahmunah V, Koh JEW, Oh SL, Han WS, Yip LWL, Acharya UR. Automated detection of glaucoma using elongated quinary patterns technique with optical coherence tomography angiogram images. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.102895] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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29
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Zeng W, Yuan C. ECG arrhythmia classification based on variational mode decomposition, Shannon energy envelope and deterministic learning. INT J MACH LEARN CYB 2021. [DOI: 10.1007/s13042-021-01389-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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30
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Mohanty M, Dash M, Biswal P, Sabut S. Classification of ventricular arrhythmias using empirical mode decomposition and machine learning algorithms. PROGRESS IN ARTIFICIAL INTELLIGENCE 2021. [DOI: 10.1007/s13748-021-00250-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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31
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Combined deep CNN-LSTM network-based multitasking learning architecture for noninvasive continuous blood pressure estimation using difference in ECG-PPG features. Sci Rep 2021; 11:13539. [PMID: 34188132 PMCID: PMC8242087 DOI: 10.1038/s41598-021-92997-0] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2020] [Accepted: 06/02/2021] [Indexed: 12/05/2022] Open
Abstract
The pulse arrival time (PAT), the difference between the R-peak time of electrocardiogram (ECG) signal and the systolic peak of photoplethysmography (PPG) signal, is an indicator that enables noninvasive and continuous blood pressure estimation. However, it is difficult to accurately measure PAT from ECG and PPG signals because they have inconsistent shapes owing to patient-specific physical characteristics, pathological conditions, and movements. Accordingly, complex preprocessing is required to estimate blood pressure based on PAT. In this paper, as an alternative solution, we propose a noninvasive continuous algorithm using the difference between ECG and PPG as a new feature that can include PAT information. The proposed algorithm is a deep CNN–LSTM-based multitasking machine learning model that outputs simultaneous prediction results of systolic (SBP) and diastolic blood pressures (DBP). We used a total of 48 patients on the PhysioNet website by splitting them into 38 patients for training and 10 patients for testing. The prediction accuracies of SBP and DBP were 0.0 ± 1.6 mmHg and 0.2 ± 1.3 mmHg, respectively. Even though the proposed model was assessed with only 10 patients, this result was satisfied with three guidelines, which are the BHS, AAMI, and IEEE standards for blood pressure measurement devices.
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32
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Oh SL, Jahmunah V, Arunkumar N, Abdulhay EW, Gururajan R, Adib N, Ciaccio EJ, Cheong KH, Acharya UR. A novel automated autism spectrum disorder detection system. COMPLEX INTELL SYST 2021. [DOI: 10.1007/s40747-021-00408-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
AbstractAutism spectrum disorder (ASD) is a neurological and developmental disorder that begins early in childhood and lasts throughout a person’s life. Autism is influenced by both genetic and environmental factors. Lack of social interaction, communication problems, and a limited range of behaviors and interests are possible characteristics of autism in children, alongside other symptoms. Electroencephalograms provide useful information about changes in brain activity and hence are efficaciously used for diagnosis of neurological disease. Eighteen nonlinear features were extracted from EEG signals of 40 children with a diagnosis of autism spectrum disorder and 37 children with no diagnosis of neuro developmental disorder children. Feature selection was performed using Student’s t test, and Marginal Fisher Analysis was employed for data reduction. The features were ranked according to Student’s t test. The three most significant features were used to develop the autism index, while the ranked feature set was input to SVM polynomials 1, 2, and 3 for classification. The SVM polynomial 2 yielded the highest classification accuracy of 98.70% with 20 features. The developed classification system is likely to aid healthcare professionals as a diagnostic tool to detect autism. With more data, in our future work, we intend to employ deep learning models and to explore a cloud-based detection system for the detection of autism. Our study is novel, as we have analyzed all nonlinear features, and we are one of the first groups to have uniquely developed an autism (ASD) index using the extracted features.
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33
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Jahmunah V, Ng EYK, San TR, Acharya UR. Automated detection of coronary artery disease, myocardial infarction and congestive heart failure using GaborCNN model with ECG signals. Comput Biol Med 2021; 134:104457. [PMID: 33991857 DOI: 10.1016/j.compbiomed.2021.104457] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2021] [Revised: 04/22/2021] [Accepted: 04/26/2021] [Indexed: 01/02/2023]
Abstract
Cardiovascular diseases (CVDs) are main causes of death globally with coronary artery disease (CAD) being the most important. Timely diagnosis and treatment of CAD is crucial to reduce the incidence of CAD complications like myocardial infarction (MI) and ischemia-induced congestive heart failure (CHF). Electrocardiogram (ECG) signals are most commonly employed as the diagnostic screening tool to detect CAD. In this study, an automated system (AS) was developed for the automated categorization of electrocardiogram signals into normal, CAD, myocardial infarction (MI) and congestive heart failure (CHF) classes using convolutional neural network (CNN) and unique GaborCNN models. Weight balancing was used to balance the imbalanced dataset. High classification accuracies of more than 98.5% were obtained by the CNN and GaborCNN models respectively, for the 4-class classification of normal, coronary artery disease, myocardial infarction and congestive heart failure classes. GaborCNN is a more preferred model due to its good performance and reduced computational complexity as compared to the CNN model. To the best of our knowledge, this is the first study to propose GaborCNN model for automated categorizing of normal, coronary artery disease, myocardial infarction and congestive heart failure classes using ECG signals. Our proposed system is equipped to be validated with bigger database and has the potential to aid the clinicians to screen for CVDs using ECG signals.
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Affiliation(s)
- V Jahmunah
- Department of Mechanical and Aerospace Engineering, Nanyang Technological University, Singapore
| | - E Y K Ng
- Department of Mechanical and Aerospace Engineering, Nanyang Technological University, Singapore.
| | | | - U Rajendra Acharya
- School of Engineering, Ngee Ann Polytechnic, Singapore; Biomedical Engineering, School of Social Science and Technology, Singapore University of Social Sciences, Singapore; International Research Organization for Advanced Science and Technology (IROAST), Kumamoto University, Kumamoto, Japan; Department Bioinformatics and Medical Engineering, Asia University, Taiwan; School of Management and Enterprise, University of Southern Queensland, Australia.
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34
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Soto-Murillo MA, Galván-Tejada JI, Galván-Tejada CE, Celaya-Padilla JM, Luna-García H, Magallanes-Quintanar R, Gutiérrez-García TA, Gamboa-Rosales H. Automatic Evaluation of Heart Condition According to the Sounds Emitted and Implementing Six Classification Methods. Healthcare (Basel) 2021; 9:317. [PMID: 33809283 PMCID: PMC7999739 DOI: 10.3390/healthcare9030317] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2021] [Revised: 02/25/2021] [Accepted: 03/04/2021] [Indexed: 11/16/2022] Open
Abstract
The main cause of death in Mexico and the world is heart disease, and it will continue to lead the death rate in the next decade according to data from the World Health Organization (WHO) and the National Institute of Statistics and Geography (INEGI). Therefore, the objective of this work is to implement, compare and evaluate machine learning algorithms that are capable of classifying normal and abnormal heart sounds. Three different sounds were analyzed in this study; normal heart sounds, heart murmur sounds and extra systolic sounds, which were labeled as healthy sounds (normal sounds) and unhealthy sounds (murmur and extra systolic sounds). From these sounds, fifty-two features were calculated to create a numerical dataset; thirty-six statistical features, eight Linear Predictive Coding (LPC) coefficients and eight Cepstral Frequency-Mel Coefficients (MFCC). From this dataset two more were created; one normalized and one standardized. These datasets were analyzed with six classifiers: k-Nearest Neighbors, Naive Bayes, Decision Trees, Logistic Regression, Support Vector Machine and Artificial Neural Networks, all of them were evaluated with six metrics: accuracy, specificity, sensitivity, ROC curve, precision and F1-score, respectively. The performances of all the models were statistically significant, but the models that performed best for this problem were logistic regression for the standardized data set, with a specificity of 0.7500 and a ROC curve of 0.8405, logistic regression for the normalized data set, with a specificity of 0.7083 and a ROC curve of 0.8407, and Support Vector Machine with a lineal kernel for the non-normalized data; with a specificity of 0.6842 and a ROC curve of 0.7703. Both of these metrics are of utmost importance in evaluating the performance of computer-assisted diagnostic systems.
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Affiliation(s)
- Manuel A. Soto-Murillo
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (M.A.S.-M.); (C.E.G.-T.); (J.M.C.-P.); (H.L.-G.); (R.M.-Q.); (H.G.-R.)
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (M.A.S.-M.); (C.E.G.-T.); (J.M.C.-P.); (H.L.-G.); (R.M.-Q.); (H.G.-R.)
| | - Carlos E. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (M.A.S.-M.); (C.E.G.-T.); (J.M.C.-P.); (H.L.-G.); (R.M.-Q.); (H.G.-R.)
| | - Jose M. Celaya-Padilla
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (M.A.S.-M.); (C.E.G.-T.); (J.M.C.-P.); (H.L.-G.); (R.M.-Q.); (H.G.-R.)
| | - Huizilopoztli Luna-García
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (M.A.S.-M.); (C.E.G.-T.); (J.M.C.-P.); (H.L.-G.); (R.M.-Q.); (H.G.-R.)
| | - Rafael Magallanes-Quintanar
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (M.A.S.-M.); (C.E.G.-T.); (J.M.C.-P.); (H.L.-G.); (R.M.-Q.); (H.G.-R.)
| | - Tania A. Gutiérrez-García
- Departamento de Ciencias Computacionales, Centro Universitario de Ciencias Exactas e Ingenierías, Universidad de Guadalajara, Blvd. Marcelino García Barragán 1421, Guadalajara, Jalisco 44430, Mexico;
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (M.A.S.-M.); (C.E.G.-T.); (J.M.C.-P.); (H.L.-G.); (R.M.-Q.); (H.G.-R.)
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35
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Zeng W, Yuan J, Yuan C, Wang Q, Liu F, Wang Y. A novel technique for the detection of myocardial dysfunction using ECG signals based on hybrid signal processing and neural networks. Soft comput 2021. [DOI: 10.1007/s00500-020-05465-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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36
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Soh DCK, Ng E, Jahmunah V, Oh SL, Tan RS, Acharya U. Automated diagnostic tool for hypertension using convolutional neural network. Comput Biol Med 2020; 126:103999. [DOI: 10.1016/j.compbiomed.2020.103999] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2020] [Revised: 08/29/2020] [Accepted: 08/29/2020] [Indexed: 12/13/2022]
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37
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Automated prediction of sepsis using temporal convolutional network. Comput Biol Med 2020; 127:103957. [PMID: 32938540 DOI: 10.1016/j.compbiomed.2020.103957] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2020] [Revised: 08/02/2020] [Accepted: 08/02/2020] [Indexed: 01/14/2023]
Abstract
Multiple organ failure is the trademark of sepsis. Sepsis occurs when the body's reaction to infection causes injury to its tissues and organs. As a consequence, fluid builds up in the tissues causing organ failure and leading to septic shock eventually. Some symptoms of sepsis include fever, arrhythmias, blood vessel leaks, impaired clotting, and generalised inflammation. In order to address the limitations in current diagnosis, we have proposed a cost-effective automated diagnostic tool in this study. A deep temporal convolution network has been developed for the prediction of sepsis. Septic data was fed to the model and a high accuracy and area under ROC curve (AUROC) of 98.8% and 98.0% were achieved respectively, for per time-step metrics. A relatively high accuracy and AUROC of 95.5% and 91.0% were also achieved respectively, for per-patient metrics. This is a novel study in that it has investigated per time-step metrics, compared to other studies which investigated per-patient metrics. Our model has also been evaluated by three validation methods. Thus, the recommended model is robust with high accuracy and precision and has the potential to be used as a tool for the prediction of sepsis in hospitals.
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38
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Zeng W, Yuan J, Yuan C, Wang Q, Liu F, Wang Y. Classification of myocardial infarction based on hybrid feature extraction and artificial intelligence tools by adopting tunable-Q wavelet transform (TQWT), variational mode decomposition (VMD) and neural networks. Artif Intell Med 2020; 106:101848. [PMID: 32593387 DOI: 10.1016/j.artmed.2020.101848] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2019] [Revised: 02/16/2020] [Accepted: 03/20/2020] [Indexed: 12/18/2022]
Abstract
Cardiovascular diseases (CVD) is the leading cause of human mortality and morbidity around the world, in which myocardial infarction (MI) is a silent condition that irreversibly damages the heart muscles. Currently, electrocardiogram (ECG) is widely used by the clinicians to diagnose MI patients due to its inexpensiveness and non-invasive nature. Pathological alterations provoked by MI cause slow conduction by increasing axial resistance on coupling between cells. This issue may cause abnormal patterns in the dynamics of the tip of the cardiac vector in the ECG signals. However, manual interpretation of the pathological alternations induced by MI is a time-consuming, tedious and subjective task. To overcome such disadvantages, computer-aided diagnosis techniques including signal processing and artificial intelligence tools have been developed. In this study we propose a novel technique for automatic detection of MI based on hybrid feature extraction and artificial intelligence tools. Tunable quality factor (Q-factor) wavelet transform (TQWT), variational mode decomposition (VMD) and phase space reconstruction (PSR) are utilized to extract representative features to form cardiac vectors with synthesis of the standard 12-lead and Frank XYZ leads. They are combined with neural networks to model, identify and detect abnormal patterns in the dynamics of cardiac system caused by MI. First, 12-lead ECG signals are reduced to 3-dimensional VCG signals, which are synthesized with Frank XYZ leads to build a hybrid 4-dimensional cardiac vector. Second, this vector is decomposed into a set of frequency subbands with a number of decomposition levels by using the TQWT method. Third, VMD is employed to decompose the subband of the 4-dimensional cardiac vector into different intrinsic modes, in which the first intrinsic mode contains the majority of the cardiac vector's energy and is considered to be the predominant intrinsic mode. It is selected to construct the reference variable for analysis. Fourth, phase space of the reference variable is reconstructed, in which the properties associated with the nonlinear cardiac system dynamics are preserved. Three-dimensional (3D) PSR together with Euclidean distance (ED) has been utilized to derive features, which demonstrate significant difference in cardiac system dynamics between normal (healthy) and MI cardiac vector signals. Fifth, cardiac system dynamics can be modeled and identified using neural networks, which employ the ED of 3D PSR of the reference variable as the input features. The difference of cardiac system dynamics between healthy control and MI cardiac vector is computed and used for the detection of MI based on a bank of estimators. Finally, data sets, which include conventional 12-lead and Frank XYZ leads ECG signal fragments from 148 patients with MI and 52 healthy controls from PTB diagnostic ECG database, are used for evaluation. By using the 10-fold cross-validation style, the achieved average classification accuracy is reported to be 97.98%. Currently, ST segment evaluation is one of the major and traditional ways for the MI detection. However, there exist weak or even undetectable ST segments in many ECG signals. Since the proposed method does not rely on the information of ST waves, it can serve as a complementary MI detection algorithm in the intensive care unit (ICU) of hospitals to assist the clinicians in confirming their diagnosis. Overall, our results verify that the proposed features may satisfactorily reflect cardiac system dynamics, and are complementary to the existing ECG features for automatic cardiac function analysis.
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Affiliation(s)
- Wei Zeng
- School of Physics and Mechanical and Electrical Engineering, Longyan University, Longyan 364012, PR China.
| | - Jian Yuan
- School of Physics and Mechanical and Electrical Engineering, Longyan University, Longyan 364012, PR China
| | - Chengzhi Yuan
- Department of Mechanical, Industrial and Systems Engineering, University of Rhode Island, Kingston, RI 02881, USA
| | - Qinghui Wang
- School of Physics and Mechanical and Electrical Engineering, Longyan University, Longyan 364012, PR China
| | - Fenglin Liu
- School of Physics and Mechanical and Electrical Engineering, Longyan University, Longyan 364012, PR China
| | - Ying Wang
- School of Physics and Mechanical and Electrical Engineering, Longyan University, Longyan 364012, PR China
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Timpel P, Oswald S, Schwarz PEH, Harst L. Mapping the Evidence on the Effectiveness of Telemedicine Interventions in Diabetes, Dyslipidemia, and Hypertension: An Umbrella Review of Systematic Reviews and Meta-Analyses. J Med Internet Res 2020; 22:e16791. [PMID: 32186516 PMCID: PMC7113804 DOI: 10.2196/16791] [Citation(s) in RCA: 123] [Impact Index Per Article: 30.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2019] [Revised: 11/26/2019] [Accepted: 12/15/2019] [Indexed: 12/22/2022] Open
Abstract
Background Telemedicine is defined by three characteristics: (1) using information and communication technologies, (2) covering a geographical distance, and (3) involving professionals who deliver care directly to a patient or a group of patients. It is said to improve chronic care management and self-management in patients with chronic diseases. However, currently available guidelines for the care of patients with diabetes, hypertension, or dyslipidemia do not include evidence-based guidance on which components of telemedicine are most effective for which patient populations. Objective The primary aim of this study was to identify, synthesize, and critically appraise evidence on the effectiveness of telemedicine solutions and their components on clinical outcomes in patients with diabetes, hypertension, or dyslipidemia. Methods We conducted an umbrella review of high-level evidence, including systematic reviews and meta-analyses of randomized controlled trials. On the basis of predefined eligibility criteria, extensive automated and manual searches of the databases PubMed, EMBASE, and Cochrane Library were conducted. Two authors independently screened the studies, extracted data, and carried out the quality assessments. Extracted data were presented according to intervention components and patient characteristics using defined thresholds of clinical relevance. Overall certainty of outcomes was assessed using the Grading of Recommendations, Assessment, Development, and Evaluation (GRADE) tool. Results Overall, 3564 references were identified, of which 46 records were included after applying eligibility criteria. The majority of included studies were published after 2015. Significant and clinically relevant reduction rates for glycated hemoglobin (HbA1c; ≤−0.5%) were found in patients with diabetes. Higher reduction rates were found for recently diagnosed patients and those with higher baseline HbA1c (>8%). Telemedicine was not found to have a significant and clinically meaningful impact on blood pressure. Only reviews or meta-analyses reporting lipid outcomes in patients with diabetes were found. GRADE assessment revealed that the overall quality of the evidence was low to very low. Conclusions The results of this umbrella review indicate that telemedicine has the potential to improve clinical outcomes in patients with diabetes. Although subgroup-specific effectiveness rates favoring certain intervention and population characteristics were found, the low GRADE ratings indicate that evidence can be considered as limited. Future updates of clinical care and practice guidelines should carefully assess the methodological quality of studies and the overall certainty of subgroup-specific outcomes before recommending telemedicine interventions for certain patient populations.
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Affiliation(s)
- Patrick Timpel
- Department for Prevention and Care of Diabetes, Faculty of Medicine Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany
| | - Sarah Oswald
- Master Program Health Sciences / Public Health at the Institute and Policlinic of Occupational and Social Medicine, Faculty of Medicine at the University Clinic Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany
| | - Peter E H Schwarz
- Department for Prevention and Care of Diabetes, Faculty of Medicine Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany.,Paul Langerhans Institute Dresden, Helmholtz Center Munich, University Hospital and Faculty of Medicine, Technische Universität Dresden, Dresden, Germany.,German Center for Diabetes Research (DZD e V), Neuherberg, Germany
| | - Lorenz Harst
- Research Association Public Health Saxony / Center for Evidence-Based Healthcare, Faculty of Medicine Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany
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40
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1D-CADCapsNet: One dimensional deep capsule networks for coronary artery disease detection using ECG signals. Phys Med 2020; 70:39-48. [DOI: 10.1016/j.ejmp.2020.01.007] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/16/2019] [Revised: 11/27/2019] [Accepted: 01/07/2020] [Indexed: 12/14/2022] Open
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41
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Darmawahyuni A, Nurmaini S, Yuwandini M, Muhammad Naufal Rachmatullah, Firdaus F, Tutuko B. Congestive heart failure waveform classification based on short time-step analysis with recurrent network. INFORMATICS IN MEDICINE UNLOCKED 2020. [DOI: 10.1016/j.imu.2020.100441] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023] Open
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42
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A Prototype Photoplethysmography Electronic Device that Distinguishes Congestive Heart Failure from Healthy Individuals by Applying Natural Time Analysis. ELECTRONICS 2019. [DOI: 10.3390/electronics8111288] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
In this paper, a prototype photoplethysmography (PPG) electronic device is presented for the distinction of individuals with congestive heart failure (CHF) from the healthy (H) by applying the concept of Natural Time Analysis (NTA). Data were collected simultaneously with a conventional three-electrode electrocardiography (ECG) system and our prototype PPG electronic device from H and CHF volunteers at the 2nd Department of Cardiology, Medical School of Ioannina, Greece. Statistical analysis of the results show a clear separation of CHF from H subjects by means of NTA for both the conventional ECG system and our PPG prototype system, with a clearly better distinction for the second one which additionally inherits the advantages of a low-cost portable device.
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