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Ortiz-Letechipia JS, Galvan-Tejada CE, Galván-Tejada JI, Soto-Murillo MA, Acosta-Cruz E, Gamboa-Rosales H, Celaya Padilla JM, Luna-García H. Classification and selection of the main features for the identification of toxicity in Agaricus and Lepiota with machine learning algorithms. PeerJ 2024; 12:e16501. [PMID: 38223762 PMCID: PMC10785791 DOI: 10.7717/peerj.16501] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2023] [Accepted: 10/31/2023] [Indexed: 01/16/2024] Open
Abstract
The occurrence of fungi is cosmopolitan, and while some mushroom species are beneficial to human health, others can be toxic and cause illness problems. This study aimed to analyze the organoleptic, ecological, and morphological characteristics of a group of fungal specimens and identify the most significant features to develop models for fungal toxicity classification using genetic algorithms and LASSO regression. The results of the study indicated that odor, spore print color, and habitat were the most significant characteristics identified by the genetic algorithm GALGO. Meanwhile, odor, gill size, stalk shape, and twelve other features were the relevant characteristics identified by LASSO regression. The importance score of the odor variable was 99.99%, gill size obtained 73.7%, stalk shape scored 39.9%, and the remaining variables did not score higher than 18%. Logistic regression, k-nearest neighbor (KNN), and XG-Boost classification algorithms were used to develop models using the features selected by both GALGO and LASSO. The models were evaluated using sensitivity, specificity, and accuracy metrics. The models with the highest AUC values were XGBoost, with a maximum value of 0.99 using the features selected by LASSO, followed by KNN with a maximum value of 0.99. The GALGO selection resulted in a maximum AUC of 0.98 in KNN and XGBoost. The models developed in this study have the potential to aid in the accurate identification of toxic fungi, which can prevent health problems caused by their consumption.
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Affiliation(s)
| | - Carlos E. Galvan-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Zacatecas, Zacatecas, México
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Zacatecas, Zacatecas, México
| | - Manuel A. Soto-Murillo
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Zacatecas, Zacatecas, México
| | - Erika Acosta-Cruz
- Departamento de Biotecnología., Universidad Autónoma de Coahuila, Saltillo, Coahuila, México
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Zacatecas, Zacatecas, México
| | - José María Celaya Padilla
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Zacatecas, Zacatecas, México
| | - Huizilopoztli Luna-García
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Zacatecas, Zacatecas, México
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2
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García-Domínguez A, Galván-Tejada CE, Magallanes-Quintanar R, Cruz M, Gonzalez-Curiel I, Delgado-Contreras JR, Soto-Murillo MA, Celaya-Padilla JM, Galván-Tejada JI. Optimizing Clinical Diabetes Diagnosis through Generative Adversarial Networks: Evaluation and Validation. Diseases 2023; 11:134. [PMID: 37873778 PMCID: PMC10594466 DOI: 10.3390/diseases11040134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2023] [Revised: 09/24/2023] [Accepted: 09/28/2023] [Indexed: 10/25/2023] Open
Abstract
The escalating prevalence of Type 2 Diabetes (T2D) represents a substantial burden on global healthcare systems, especially in regions such as Mexico. Existing diagnostic techniques, although effective, often require invasive procedures and labor-intensive efforts. The promise of artificial intelligence and data science for streamlining and enhancing T2D diagnosis is well-recognized; however, these advancements are frequently constrained by the limited availability of comprehensive patient datasets. To mitigate this challenge, the present study investigated the efficacy of Generative Adversarial Networks (GANs) for augmenting existing T2D patient data, with a focus on a Mexican cohort. The researchers utilized a dataset of 1019 Mexican nationals, divided into 499 non-diabetic controls and 520 diabetic cases. GANs were applied to create synthetic patient profiles, which were subsequently used to train a Random Forest (RF) classification model. The study's findings revealed a notable improvement in the model's diagnostic accuracy, validating the utility of GAN-based data augmentation in a clinical context. The results bear significant implications for enhancing the robustness and reliability of Machine Learning tools in T2D diagnosis and management, offering a pathway toward more timely and effective patient care.
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Affiliation(s)
- Antonio García-Domínguez
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (A.G.-D.); (R.M.-Q.); (J.R.D.-C.); (M.A.S.-M.); (J.M.C.-P.); (J.I.G.-T.)
| | - Carlos E. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (A.G.-D.); (R.M.-Q.); (J.R.D.-C.); (M.A.S.-M.); (J.M.C.-P.); (J.I.G.-T.)
| | - Rafael Magallanes-Quintanar
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (A.G.-D.); (R.M.-Q.); (J.R.D.-C.); (M.A.S.-M.); (J.M.C.-P.); (J.I.G.-T.)
| | - Miguel Cruz
- Medical Research Unit in Biochemestry, National Medical Center Siglo XXI, IMSS, Mexico City 06720, Mexico;
| | - Irma Gonzalez-Curiel
- Unidad Académica de Ciencias Químicas, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico;
| | - J. Rubén Delgado-Contreras
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (A.G.-D.); (R.M.-Q.); (J.R.D.-C.); (M.A.S.-M.); (J.M.C.-P.); (J.I.G.-T.)
| | - Manuel A. Soto-Murillo
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (A.G.-D.); (R.M.-Q.); (J.R.D.-C.); (M.A.S.-M.); (J.M.C.-P.); (J.I.G.-T.)
| | - José M. Celaya-Padilla
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (A.G.-D.); (R.M.-Q.); (J.R.D.-C.); (M.A.S.-M.); (J.M.C.-P.); (J.I.G.-T.)
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (A.G.-D.); (R.M.-Q.); (J.R.D.-C.); (M.A.S.-M.); (J.M.C.-P.); (J.I.G.-T.)
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3
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Reveles-Gómez LC, Luna-García H, Celaya-Padilla JM, Barría-Huidobro C, Gamboa-Rosales H, Solís-Robles R, Arceo-Olague JG, Galván-Tejada JI, Galván-Tejada CE, Rondon D, Villalba-Condori KO. Detection of Pedestrians in Reverse Camera Using Multimodal Convolutional Neural Networks. Sensors (Basel) 2023; 23:7559. [PMID: 37688015 PMCID: PMC10490826 DOI: 10.3390/s23177559] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2023] [Revised: 08/22/2023] [Accepted: 08/25/2023] [Indexed: 09/10/2023]
Abstract
In recent years, the application of artificial intelligence (AI) in the automotive industry has led to the development of intelligent systems focused on road safety, aiming to improve protection for drivers and pedestrians worldwide to reduce the number of accidents yearly. One of the most critical functions of these systems is pedestrian detection, as it is crucial for the safety of everyone involved in road traffic. However, pedestrian detection goes beyond the front of the vehicle; it is also essential to consider the vehicle's rear since pedestrian collisions occur when the car is in reverse drive. To contribute to the solution of this problem, this research proposes a model based on convolutional neural networks (CNN) using a proposed one-dimensional architecture and the Inception V3 architecture to fuse the information from the backup camera and the distance measured by the ultrasonic sensors, to detect pedestrians when the vehicle is reversing. In addition, specific data collection was performed to build a database for the research. The proposed model showed outstanding results with 99.85% accuracy and 99.86% correct classification performance, demonstrating that it is possible to achieve the goal of pedestrian detection using CNN by fusing two types of data.
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Affiliation(s)
- Luis C. Reveles-Gómez
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (L.C.R.-G.)
| | - Huizilopoztli Luna-García
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (L.C.R.-G.)
| | - José M. Celaya-Padilla
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (L.C.R.-G.)
| | - Cristian Barría-Huidobro
- Centro de Investigación en Ciberseguridad, Universidad Mayor de Chile, Manuel Montt 367, Providencia 7500628, Chile
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (L.C.R.-G.)
| | - Roberto Solís-Robles
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (L.C.R.-G.)
| | - José G. Arceo-Olague
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (L.C.R.-G.)
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (L.C.R.-G.)
| | - Carlos E. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (L.C.R.-G.)
| | - David Rondon
- Departamento Estudios Generales, Universidad Continental, Arequipa 04001, Peru
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Espino-Salinas CH, Luna-García H, Celaya-Padilla JM, Morgan-Benita JA, Vera-Vasquez C, Sarmiento WJ, Galván-Tejada CE, Galván-Tejada JI, Gamboa-Rosales H, Villalba-Condori KO. Driver Identification Using Statistical Features of Motor Activity and Genetic Algorithms. Sensors (Basel) 2023; 23:784. [PMID: 36679580 PMCID: PMC9864934 DOI: 10.3390/s23020784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/09/2022] [Revised: 12/31/2022] [Accepted: 01/05/2023] [Indexed: 06/17/2023]
Abstract
Driver identification refers to the process whose primary purpose is identifying the person behind the steering wheel using collected information about the driver him/herself. The constant monitoring of drivers through sensors generates great benefits in advanced driver assistance systems (ADAS), to learn more about the behavior of road users. Currently, there are many research works that address the subject in search of creating intelligent models that help to identify vehicle users in an efficient and objective way. However, the different methodologies proposed to create these models are based on data generated from sensors that include different vehicle brands on routes established in real environments, which, although they provide very important information for different purposes, in the case of driver identification, there may be a certain degree of bias due to the different situations in which the route environment may change. The proposed method seeks to intelligently and objectively select the most outstanding statistical features from motor activity generated in the main elements of the vehicle with genetic algorithms for driver identification, this process being newer than those established by the state-of-the-art. The results obtained from the proposal were an accuracy of 90.74% to identify two drivers and 62% for four, using a Random Forest Classifier (RFC). With this, it can be concluded that a comprehensive selection of features can greatly optimize the identification of drivers.
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Affiliation(s)
- Carlos H. Espino-Salinas
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
| | - Huizilopoztli Luna-García
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
| | - José M. Celaya-Padilla
- CONACYT, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
| | - Jorge A. Morgan-Benita
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
| | | | - Wilson J. Sarmiento
- Ingeniería en Multimedia, Universidad Militar de Nueva Granada, Cra 11, Bogotá 101-80, Colombia
| | - Carlos E. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
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5
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Cuevas-Rodriguez EO, Galvan-Tejada CE, Maeda-Gutiérrez V, Moreno-Chávez G, Galván-Tejada JI, Gamboa-Rosales H, Luna-García H, Moreno-Baez A, Celaya-Padilla JM. Comparative study of convolutional neural network architectures for gastrointestinal lesions classification. PeerJ 2023; 11:e14806. [PMID: 36945355 PMCID: PMC10024900 DOI: 10.7717/peerj.14806] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2022] [Accepted: 01/05/2023] [Indexed: 03/18/2023] Open
Abstract
The gastrointestinal (GI) tract can be affected by different diseases or lesions such as esophagitis, ulcers, hemorrhoids, and polyps, among others. Some of them can be precursors of cancer such as polyps. Endoscopy is the standard procedure for the detection of these lesions. The main drawback of this procedure is that the diagnosis depends on the expertise of the doctor. This means that some important findings may be missed. In recent years, this problem has been addressed by deep learning (DL) techniques. Endoscopic studies use digital images. The most widely used DL technique for image processing is the convolutional neural network (CNN) due to its high accuracy for modeling complex phenomena. There are different CNNs that are characterized by their architecture. In this article, four architectures are compared: AlexNet, DenseNet-201, Inception-v3, and ResNet-101. To determine which architecture best classifies GI tract lesions, a set of metrics; accuracy, precision, sensitivity, specificity, F1-score, and area under the curve (AUC) were used. These architectures were trained and tested on the HyperKvasir dataset. From this dataset, a total of 6,792 images corresponding to 10 findings were used. A transfer learning approach and a data augmentation technique were applied. The best performing architecture was DenseNet-201, whose results were: 97.11% of accuracy, 96.3% sensitivity, 99.67% specificity, and 95% AUC.
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6
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Morgan-Benita J, Sánchez-Reyna AG, Espino-Salinas CH, Oropeza-Valdez JJ, Luna-García H, Galván-Tejada CE, Galván-Tejada JI, Gamboa-Rosales H, Enciso-Moreno JA, Celaya-Padilla J. Metabolomic Selection in the Progression of Type 2 Diabetes Mellitus: A Genetic Algorithm Approach. Diagnostics (Basel) 2022; 12:diagnostics12112803. [PMID: 36428864 PMCID: PMC9689091 DOI: 10.3390/diagnostics12112803] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2022] [Revised: 11/04/2022] [Accepted: 11/07/2022] [Indexed: 11/18/2022] Open
Abstract
According to the World Health Organization (WHO), type 2 diabetes mellitus (T2DM) is a result of the inefficient use of insulin by the body. More than 95% of people with diabetes have T2DM, which is largely due to excess weight and physical inactivity. This study proposes an intelligent feature selection of metabolites related to different stages of diabetes, with the use of genetic algorithms (GA) and the implementation of support vector machines (SVMs), K-Nearest Neighbors (KNNs) and Nearest Centroid (NEARCENT) and with a dataset obtained from the Instituto Mexicano del Seguro Social with the protocol name of the following: "Análisis metabolómico y transcriptómico diferencial en orina y suero de pacientes pre diabéticos, diabéticos y con nefropatía diabética para identificar potenciales biomarcadores pronósticos de daño renal" (differential metabolomic and transcriptomic analyses in the urine and serum of pre-diabetic, diabetic and diabetic nephropathy patients to identify potential prognostic biomarkers of kidney damage). In order to analyze which machine learning (ML) model is the most optimal for classifying patients with some stage of T2DM, the novelty of this work is to provide a genetic algorithm approach that detects significant metabolites in each stage of progression. More than 100 metabolites were identified as significant between all stages; with the data analyzed, the average accuracies obtained in each of the five most-accurate implementations of genetic algorithms were in the range of 0.8214-0.9893 with respect to average accuracy, providing a precise tool to use in detections and backing up a diagnosis constructed entirely with metabolomics. By providing five potential biomarkers for progression, these extremely significant metabolites are as follows: "Cer(d18:1/24:1) i2", "PC(20:3-OH/P-18:1)", "Ganoderic acid C2", "TG(16:0/17:1/18:1)" and "GPEtn(18:0/20:4)".
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Affiliation(s)
- Jorge Morgan-Benita
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
| | - Ana G. Sánchez-Reyna
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
| | - Carlos H. Espino-Salinas
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
| | - Juan José Oropeza-Valdez
- Metabolomics and Proteomics Laboratory, Autonomous University of Zacatecas, Zacatecas 98000, Mexico
| | - Huizilopoztli Luna-García
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
| | - Carlos E. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
| | | | - José Celaya-Padilla
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
- Correspondence:
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7
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Morgan-Benita JA, Galván-Tejada CE, Cruz M, Galván-Tejada JI, Gamboa-Rosales H, Arceo-Olague JG, Luna-García H, Celaya-Padilla JM. Hard Voting Ensemble Approach for the Detection of Type 2 Diabetes in Mexican Population with Non-Glucose Related Features. Healthcare (Basel) 2022; 10:healthcare10081362. [PMID: 35893185 PMCID: PMC9331873 DOI: 10.3390/healthcare10081362] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2022] [Revised: 07/11/2022] [Accepted: 07/15/2022] [Indexed: 11/16/2022] Open
Abstract
Type 2 diabetes mellitus (T2DM) represents one of the biggest health problems in Mexico, and it is extremely important to early detect this disease and its complications. For a noninvasive detection of T2DM, a machine learning (ML) approach that uses ensemble classification models with dichotomous output that is also fast and effective for early detection and prediction of T2D can be used. In this article, an ensemble technique by hard voting is designed and implemented using generalized linear regression (GLM), support vector machines (SVM) and artificial neural networks (ANN) for the classification of T2DM patients. In the materials and methods as a first step, the data is balanced, standardized, imputed and integrated into the three models to classify the patients in a dichotomous result. For the selection of features, an implementation of LASSO is developed, with a 10-fold cross-validation and for the final validation, the Area Under the Curve (AUC) is used. The results in LASSO showed 12 features, which are used in the implemented models to obtain the best possible scenario in the developed ensemble model. The algorithm with the best performance of the three is SVM, this model obtained an AUC of 92% ± 3%. The ensemble model built with GLM, SVM and ANN obtained an AUC of 90% ± 3%.
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Affiliation(s)
- Jorge A. Morgan-Benita
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (J.A.M.-B.); (C.E.G.-T.); (J.I.G.-T.); (H.G.-R.); (J.G.A.-O.)
| | - Carlos E. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (J.A.M.-B.); (C.E.G.-T.); (J.I.G.-T.); (H.G.-R.); (J.G.A.-O.)
| | - Miguel Cruz
- Unidad de Investigación Médica en Bioquímica, Hospital de Especialidades, Centro Médico Nacional Siglo XXI, Instituto Mexicano del Seguro Social, Av. Cuauhtémoc 330, Col. Doctores, Del. Cuauhtémoc, Mexico City 06720, Mexico;
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (J.A.M.-B.); (C.E.G.-T.); (J.I.G.-T.); (H.G.-R.); (J.G.A.-O.)
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (J.A.M.-B.); (C.E.G.-T.); (J.I.G.-T.); (H.G.-R.); (J.G.A.-O.)
| | - Jose G. Arceo-Olague
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (J.A.M.-B.); (C.E.G.-T.); (J.I.G.-T.); (H.G.-R.); (J.G.A.-O.)
| | - Huizilopoztli Luna-García
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (J.A.M.-B.); (C.E.G.-T.); (J.I.G.-T.); (H.G.-R.); (J.G.A.-O.)
- Correspondence: (H.L.-G.); (J.M.C.-P.)
| | - José M. Celaya-Padilla
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (J.A.M.-B.); (C.E.G.-T.); (J.I.G.-T.); (H.G.-R.); (J.G.A.-O.)
- Correspondence: (H.L.-G.); (J.M.C.-P.)
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8
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Villagrana-Bañuelos KE, Galván-Tejada CE, Galván-Tejada JI, Gamboa-Rosales H, Celaya-Padilla JM, Soto-Murillo MA, Solís-Robles R. Machine Learning Model Based on Lipidomic Profile Information to Predict Sudden Infant Death Syndrome. Healthcare (Basel) 2022; 10:healthcare10071303. [PMID: 35885829 PMCID: PMC9317003 DOI: 10.3390/healthcare10071303] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2022] [Revised: 07/03/2022] [Accepted: 07/09/2022] [Indexed: 11/16/2022] Open
Abstract
Sudden infant death syndrome (SIDS) represents the leading cause of death in under one year of age in developing countries. Even in our century, its etiology is not clear, and there is no biomarker that is discriminative enough to predict the risk of suffering from it. Therefore, in this work, taking a public dataset on the lipidomic profile of babies who died from this syndrome compared to a control group, a univariate analysis was performed using the Mann–Whitney U test, with the aim of identifying the characteristics that enable discriminating between both groups. Those characteristics with a p-value less than or equal to 0.05 were taken; once these characteristics were obtained, classification models were implemented (random forests (RF), logistic regression (LR), support vector machine (SVM) and naive Bayes (NB)). We used seventy percent of the data for model training, subjecting it to a cross-validation (k = 5) and later submitting to validation in a blind test with 30% of the remaining data, which allows simulating the scenario in real life—that is, with an unknown population for the model. The model with the best performance was RF, since in the blind test, it obtained an AUC of 0.9, specificity of 1, and sensitivity of 0.8. The proposed model provides the basis for the construction of a SIDS risk prediction computer tool, which will contribute to prevention, and proposes lines of research to deal with this pathology.
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Maeda-Gutiérrez V, Galván-Tejada CE, Cruz M, Galván-Tejada JI, Gamboa-Rosales H, García-Hernández A, Luna-García H, Gonzalez-Curiel I, Martínez-Acuña M. Risk-Profile and Feature Selection Comparison in Diabetic Retinopathy. J Pers Med 2021; 11:1327. [PMID: 34945799 PMCID: PMC8705564 DOI: 10.3390/jpm11121327] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2021] [Revised: 11/24/2021] [Accepted: 11/25/2021] [Indexed: 11/16/2022] Open
Abstract
One of the main microvascular complications presented in the Mexican population is diabetic retinopathy which affects 27.50% of individuals with type 2 diabetes. Therefore, the purpose of this study is to construct a predictive model to find out the risk factors of this complication. The dataset contained a total of 298 subjects, including clinical and paraclinical features. An analysis was constructed using machine learning techniques including Boruta as a feature selection method, and random forest as classification algorithm. The model was evaluated through a statistical test based on sensitivity, specificity, area under the curve (AUC), and receiving operating characteristic (ROC) curve. The results present significant values obtained by the model obtaining 69% of AUC. Moreover, a risk evaluation was incorporated to evaluate the impact of the predictors. The proposed method identifies creatinine, lipid treatment, glomerular filtration rate, waist hip ratio, total cholesterol, and high density lipoprotein as risk factors in Mexican subjects. The odds ratio increases by 3.5916 times for control patients which have high levels of cholesterol. It is possible to conclude that this proposed methodology is a preliminary computer-aided diagnosis tool for clinical decision-helping to identify the diagnosis of DR.
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Affiliation(s)
- Valeria Maeda-Gutiérrez
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro 98000, Mexico; (V.M.-G.); (J.I.G.-T.); (H.G.-R.); (A.G.-H.); (H.L.-G.)
| | - Carlos E. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro 98000, Mexico; (V.M.-G.); (J.I.G.-T.); (H.G.-R.); (A.G.-H.); (H.L.-G.)
| | - Miguel Cruz
- Unidad de Investigación Médica en Bioquímica, Centro Médico Nacional Siglo XXI, Hospital de Especialidades, Instituto Mexicano del Seguro Social, Mexico City, Av. Cuauhtémoc 330, Col. Doctores, Del. Cuauhtémoc, Ciudad de Mexico 06720, Mexico;
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro 98000, Mexico; (V.M.-G.); (J.I.G.-T.); (H.G.-R.); (A.G.-H.); (H.L.-G.)
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro 98000, Mexico; (V.M.-G.); (J.I.G.-T.); (H.G.-R.); (A.G.-H.); (H.L.-G.)
| | - Alejandra García-Hernández
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro 98000, Mexico; (V.M.-G.); (J.I.G.-T.); (H.G.-R.); (A.G.-H.); (H.L.-G.)
| | - Huizilopoztli Luna-García
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro 98000, Mexico; (V.M.-G.); (J.I.G.-T.); (H.G.-R.); (A.G.-H.); (H.L.-G.)
| | - Irma Gonzalez-Curiel
- Unidad Académica de Ciencias Químicas, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro 98000, Mexico; (I.G.-C.); (M.M.-A.)
| | - Mónica Martínez-Acuña
- Unidad Académica de Ciencias Químicas, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro 98000, Mexico; (I.G.-C.); (M.M.-A.)
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10
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Sánchez-Reyna AG, Celaya-Padilla JM, Galván-Tejada CE, Luna-García H, Gamboa-Rosales H, Ramirez-Morales A, Galván-Tejada JI. Multimodal Early Alzheimer's Detection, a Genetic Algorithm Approach with Support Vector Machines. Healthcare (Basel) 2021; 9:971. [PMID: 34442108 PMCID: PMC8391811 DOI: 10.3390/healthcare9080971] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Accepted: 07/26/2021] [Indexed: 11/16/2022] Open
Abstract
Alzheimer's disease (AD) is a neurodegenerative disease that mainly affects older adults. Currently, AD is associated with certain hypometabolic biomarkers, beta-amyloid peptides, hyperphosphorylated tau protein, and changes in brain morphology. Accurate diagnosis of AD, as well as mild cognitive impairment (MCI) (prodromal stage of AD), is essential for early care of the disease. As a result, machine learning techniques have been used in recent years for the diagnosis of AD. In this research, we propose a novel methodology to generate a multivariate model that combines different types of features for the detection of AD. In order to obtain a robust biomarker, ADNI baseline data, clinical and neuropsychological assessments (1024 features) of 106 patients were used. The data were normalized, and a genetic algorithm was implemented for the selection of the most significant features. Subsequently, for the development and validation of the multivariate classification model, a support vector machine model was created, and a five-fold cross-validation with an AUC of 87.63% was used to measure model performance. Lastly, an independent blind test of our final model, using 20 patients not considered during the model construction, yielded an AUC of 100%.
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Affiliation(s)
- Ana G. Sánchez-Reyna
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro Historico, Zacatecas 98000, Mexico; (A.G.S.-R.); (J.M.C.-P.); (C.E.G.-T.); (H.L.-G.); (H.G.-R.)
| | - José M. Celaya-Padilla
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro Historico, Zacatecas 98000, Mexico; (A.G.S.-R.); (J.M.C.-P.); (C.E.G.-T.); (H.L.-G.); (H.G.-R.)
| | - Carlos E. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro Historico, Zacatecas 98000, Mexico; (A.G.S.-R.); (J.M.C.-P.); (C.E.G.-T.); (H.L.-G.); (H.G.-R.)
| | - Huizilopoztli Luna-García
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro Historico, Zacatecas 98000, Mexico; (A.G.S.-R.); (J.M.C.-P.); (C.E.G.-T.); (H.L.-G.); (H.G.-R.)
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro Historico, Zacatecas 98000, Mexico; (A.G.S.-R.); (J.M.C.-P.); (C.E.G.-T.); (H.L.-G.); (H.G.-R.)
| | | | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro Historico, Zacatecas 98000, Mexico; (A.G.S.-R.); (J.M.C.-P.); (C.E.G.-T.); (H.L.-G.); (H.G.-R.)
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11
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García-Domínguez A, Galván-Tejada CE, Brena RF, Aguileta AA, Galván-Tejada JI, Gamboa-Rosales H, Celaya-Padilla JM, Luna-García H. Children's Activity Classification for Domestic Risk Scenarios Using Environmental Sound and a Bayesian Network. Healthcare (Basel) 2021; 9:healthcare9070884. [PMID: 34356262 PMCID: PMC8307924 DOI: 10.3390/healthcare9070884] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Revised: 06/26/2021] [Accepted: 07/06/2021] [Indexed: 11/16/2022] Open
Abstract
Children’s healthcare is a relevant issue, especially the prevention of domestic accidents, since it has even been defined as a global health problem. Children’s activity classification generally uses sensors embedded in children’s clothing, which can lead to erroneous measurements for possible damage or mishandling. Having a non-invasive data source for a children’s activity classification model provides reliability to the monitoring system where it is applied. This work proposes the use of environmental sound as a data source for the generation of children’s activity classification models, implementing feature selection methods and classification techniques based on Bayesian networks, focused on the recognition of potentially triggering activities of domestic accidents, applicable in child monitoring systems. Two feature selection techniques were used: the Akaike criterion and genetic algorithms. Likewise, models were generated using three classifiers: naive Bayes, semi-naive Bayes and tree-augmented naive Bayes. The generated models, combining the methods of feature selection and the classifiers used, present accuracy of greater than 97% for most of them, with which we can conclude the efficiency of the proposal of the present work in the recognition of potentially detonating activities of domestic accidents.
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Affiliation(s)
- Antonio García-Domínguez
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro 98000, Zacatecas, Mexico; (A.G.-D.); (J.I.G.-T.); (H.G.-R.); (J.M.C.-P.); (H.L.-G.)
| | - Carlos E. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro 98000, Zacatecas, Mexico; (A.G.-D.); (J.I.G.-T.); (H.G.-R.); (J.M.C.-P.); (H.L.-G.)
- Correspondence:
| | - Ramón F. Brena
- Tecnológico de Monterrey, School of Engineering and Sciences, Av. Eugenio Garza Sada 2501 Sur, Monterrey 64849, Nuevo León, Mexico;
| | - Antonio A. Aguileta
- Facultad de Matemáticas, Universidad Autónoma de Yucatán, Anillo Periférico Norte, Tablaje Cat. 13615, Colonia Chuburná Hidalgo Inn, Mérida 97110, Yucatan, Mexico;
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro 98000, Zacatecas, Mexico; (A.G.-D.); (J.I.G.-T.); (H.G.-R.); (J.M.C.-P.); (H.L.-G.)
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro 98000, Zacatecas, Mexico; (A.G.-D.); (J.I.G.-T.); (H.G.-R.); (J.M.C.-P.); (H.L.-G.)
| | - José M. Celaya-Padilla
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro 98000, Zacatecas, Mexico; (A.G.-D.); (J.I.G.-T.); (H.G.-R.); (J.M.C.-P.); (H.L.-G.)
| | - Huizilopoztli Luna-García
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro 98000, Zacatecas, Mexico; (A.G.-D.); (J.I.G.-T.); (H.G.-R.); (J.M.C.-P.); (H.L.-G.)
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12
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Alcalá-Rmz V, Galván-Tejada CE, García-Hernández A, Valladares-Salgado A, Cruz M, Galván-Tejada JI, Celaya-Padilla JM, Luna-Garcia H, Gamboa-Rosales H. Identification of People with Diabetes Treatment through Lipids Profile Using Machine Learning Algorithms. Healthcare (Basel) 2021; 9:422. [PMID: 33917300 PMCID: PMC8067355 DOI: 10.3390/healthcare9040422] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2020] [Revised: 03/02/2021] [Accepted: 03/08/2021] [Indexed: 11/16/2022] Open
Abstract
Diabetes incidence has been a problem, because according with the World Health Organization and the International Diabetes Federation, the number of people with this disease is increasing very fast all over the world. Diabetic treatment is important to prevent the development of several complications, also lipid profile monitoring is important. For that reason the aim of this work is the implementation of machine learning algorithms that are able to classify cases, that corresponds to patients diagnosed with diabetes that have diabetes treatment, and controls that refers to subjects who do not have diabetes treatment but some of them have diabetes, bases on lipids profile levels. Logistic regression, K-nearest neighbor, decision trees and random forest were implemented, all of them were evaluated with accuracy, sensitivity, specificity and AUC-ROC curve metrics. Artificial neural network obtain an acurracy of 0.685 and an AUC value of 0.750, logistic regression achieve an accuracy of 0.729 and an AUC value of 0.795, K-nearest neighbor gets an accuracy of 0.669 and an AUC value of 0.709, on the other hand, decision tree reached an accuracy pg 0.691 and a AUC value of 0.683, finally random forest achieve an accuracy of 0.704 and an AUC curve of 0.776. The performance of all models was statistically significant, but the best performance model for this problem corresponds to logistic regression.
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Affiliation(s)
- Vanessa Alcalá-Rmz
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (V.A.-R.); (A.G.-H.); (J.I.G.-T.); (J.M.C.-P.); (H.L.-G.); (H.G.-R.)
| | - Carlos E. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (V.A.-R.); (A.G.-H.); (J.I.G.-T.); (J.M.C.-P.); (H.L.-G.); (H.G.-R.)
| | - Alejandra García-Hernández
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (V.A.-R.); (A.G.-H.); (J.I.G.-T.); (J.M.C.-P.); (H.L.-G.); (H.G.-R.)
| | - Adan Valladares-Salgado
- Unidad de Investigación Médica en Bioquímica, Hospital de Especialidades, Centro Médico Nacional Siglo XXI, Instituto Mexicano del Seguro Social, Av. Cuauhtémoc 330, Col. Doctores, Del. Cuauhtémoc, Mexico City 06720, Mexico; (A.V.-S.); (M.C.)
| | - Miguel Cruz
- Unidad de Investigación Médica en Bioquímica, Hospital de Especialidades, Centro Médico Nacional Siglo XXI, Instituto Mexicano del Seguro Social, Av. Cuauhtémoc 330, Col. Doctores, Del. Cuauhtémoc, Mexico City 06720, Mexico; (A.V.-S.); (M.C.)
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (V.A.-R.); (A.G.-H.); (J.I.G.-T.); (J.M.C.-P.); (H.L.-G.); (H.G.-R.)
| | - Jose M. Celaya-Padilla
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (V.A.-R.); (A.G.-H.); (J.I.G.-T.); (J.M.C.-P.); (H.L.-G.); (H.G.-R.)
| | - Huizilopoztli Luna-Garcia
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (V.A.-R.); (A.G.-H.); (J.I.G.-T.); (J.M.C.-P.); (H.L.-G.); (H.G.-R.)
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro, Zacatecas 98000, Mexico; (V.A.-R.); (A.G.-H.); (J.I.G.-T.); (J.M.C.-P.); (H.L.-G.); (H.G.-R.)
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13
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Soto-Murillo MA, Galván-Tejada JI, Galván-Tejada CE, Celaya-Padilla JM, Luna-García H, Magallanes-Quintanar R, Gutiérrez-García TA, Gamboa-Rosales H. Automatic Evaluation of Heart Condition According to the Sounds Emitted and Implementing Six Classification Methods. Healthcare (Basel) 2021; 9:317. [PMID: 33809283 PMCID: PMC7999739 DOI: 10.3390/healthcare9030317] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2021] [Revised: 02/25/2021] [Accepted: 03/04/2021] [Indexed: 11/16/2022] Open
Abstract
The main cause of death in Mexico and the world is heart disease, and it will continue to lead the death rate in the next decade according to data from the World Health Organization (WHO) and the National Institute of Statistics and Geography (INEGI). Therefore, the objective of this work is to implement, compare and evaluate machine learning algorithms that are capable of classifying normal and abnormal heart sounds. Three different sounds were analyzed in this study; normal heart sounds, heart murmur sounds and extra systolic sounds, which were labeled as healthy sounds (normal sounds) and unhealthy sounds (murmur and extra systolic sounds). From these sounds, fifty-two features were calculated to create a numerical dataset; thirty-six statistical features, eight Linear Predictive Coding (LPC) coefficients and eight Cepstral Frequency-Mel Coefficients (MFCC). From this dataset two more were created; one normalized and one standardized. These datasets were analyzed with six classifiers: k-Nearest Neighbors, Naive Bayes, Decision Trees, Logistic Regression, Support Vector Machine and Artificial Neural Networks, all of them were evaluated with six metrics: accuracy, specificity, sensitivity, ROC curve, precision and F1-score, respectively. The performances of all the models were statistically significant, but the models that performed best for this problem were logistic regression for the standardized data set, with a specificity of 0.7500 and a ROC curve of 0.8405, logistic regression for the normalized data set, with a specificity of 0.7083 and a ROC curve of 0.8407, and Support Vector Machine with a lineal kernel for the non-normalized data; with a specificity of 0.6842 and a ROC curve of 0.7703. Both of these metrics are of utmost importance in evaluating the performance of computer-assisted diagnostic systems.
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Affiliation(s)
- Manuel A. Soto-Murillo
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (M.A.S.-M.); (C.E.G.-T.); (J.M.C.-P.); (H.L.-G.); (R.M.-Q.); (H.G.-R.)
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (M.A.S.-M.); (C.E.G.-T.); (J.M.C.-P.); (H.L.-G.); (R.M.-Q.); (H.G.-R.)
| | - Carlos E. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (M.A.S.-M.); (C.E.G.-T.); (J.M.C.-P.); (H.L.-G.); (R.M.-Q.); (H.G.-R.)
| | - Jose M. Celaya-Padilla
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (M.A.S.-M.); (C.E.G.-T.); (J.M.C.-P.); (H.L.-G.); (R.M.-Q.); (H.G.-R.)
| | - Huizilopoztli Luna-García
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (M.A.S.-M.); (C.E.G.-T.); (J.M.C.-P.); (H.L.-G.); (R.M.-Q.); (H.G.-R.)
| | - Rafael Magallanes-Quintanar
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (M.A.S.-M.); (C.E.G.-T.); (J.M.C.-P.); (H.L.-G.); (R.M.-Q.); (H.G.-R.)
| | - Tania A. Gutiérrez-García
- Departamento de Ciencias Computacionales, Centro Universitario de Ciencias Exactas e Ingenierías, Universidad de Guadalajara, Blvd. Marcelino García Barragán 1421, Guadalajara, Jalisco 44430, Mexico;
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (M.A.S.-M.); (C.E.G.-T.); (J.M.C.-P.); (H.L.-G.); (R.M.-Q.); (H.G.-R.)
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14
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Maeda-Gutiérrez V, Galván-Tejada CE, Cruz M, Valladares-Salgado A, Galván-Tejada JI, Gamboa-Rosales H, García-Hernández A, Luna-García H, Gonzalez-Curiel I, Martínez-Acuña M. Distal Symmetric Polyneuropathy Identification in Type 2 Diabetes Subjects: A Random Forest Approach. Healthcare (Basel) 2021; 9:138. [PMID: 33535510 PMCID: PMC7912731 DOI: 10.3390/healthcare9020138] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2020] [Revised: 01/23/2021] [Accepted: 01/25/2021] [Indexed: 12/05/2022] Open
Abstract
The prevalence of diabetes mellitus is increasing worldwide, causing health and economic implications. One of the principal microvascular complications of type 2 diabetes is Distal Symmetric Polyneuropathy (DSPN), affecting 42.6% of the population in Mexico. Therefore, the purpose of this study was to find out the predictors of this complication. The dataset contained a total number of 140 subjects, including clinical and paraclinical features. A multivariate analysis was constructed using Boruta as a feature selection method and Random Forest as a classification algorithm applying the strategy of K-Folds Cross Validation and Leave One Out Cross Validation. Then, the models were evaluated through a statistical analysis based on sensitivity, specificity, area under the curve (AUC) and receiving operating characteristic (ROC) curve. The results present significant values obtained by the model with this approach, presenting 67% of AUC with only three features as predictors. It is possible to conclude that this proposed methodology can classify patients with DSPN, obtaining a preliminary computer-aided diagnosis tool for the clinical area in helping to identify the diagnosis of DSPN.
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Affiliation(s)
- Valeria Maeda-Gutiérrez
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, 98000 Zacatecas, Zac, Mexico; (V.M.-G.); (J.I.G.-T.); (H.G.-R.); (A.G.-H.); (H.L.-G.)
| | - Carlos E. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, 98000 Zacatecas, Zac, Mexico; (V.M.-G.); (J.I.G.-T.); (H.G.-R.); (A.G.-H.); (H.L.-G.)
| | - Miguel Cruz
- Unidad de Investigación Médica en Bioquímica, Hospital de Especialidades, Centro Médico Nacional Siglo XXI. Instituto Mexicano del Seguro Social, Av. Cuauhtémoc 330, Col. Doctores, Del. Cuauhtémoc, Mexico City 06720, Mexico; (M.C.); (A.V.-S.)
| | - Adan Valladares-Salgado
- Unidad de Investigación Médica en Bioquímica, Hospital de Especialidades, Centro Médico Nacional Siglo XXI. Instituto Mexicano del Seguro Social, Av. Cuauhtémoc 330, Col. Doctores, Del. Cuauhtémoc, Mexico City 06720, Mexico; (M.C.); (A.V.-S.)
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, 98000 Zacatecas, Zac, Mexico; (V.M.-G.); (J.I.G.-T.); (H.G.-R.); (A.G.-H.); (H.L.-G.)
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, 98000 Zacatecas, Zac, Mexico; (V.M.-G.); (J.I.G.-T.); (H.G.-R.); (A.G.-H.); (H.L.-G.)
| | - Alejandra García-Hernández
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, 98000 Zacatecas, Zac, Mexico; (V.M.-G.); (J.I.G.-T.); (H.G.-R.); (A.G.-H.); (H.L.-G.)
| | - Huizilopoztli Luna-García
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, 98000 Zacatecas, Zac, Mexico; (V.M.-G.); (J.I.G.-T.); (H.G.-R.); (A.G.-H.); (H.L.-G.)
| | - Irma Gonzalez-Curiel
- Unidad Académica de Ciencias Químicas, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (I.G.-C.); (M.M.-A.)
| | - Mónica Martínez-Acuña
- Unidad Académica de Ciencias Químicas, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (I.G.-C.); (M.M.-A.)
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15
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Galván-Tejada CE, Herrera-García CF, Godina-González S, Villagrana-Bañuelos KE, Amaro JDDL, Herrera-García K, Rodríguez-Quiñones C, Zanella-Calzada LA, Ramírez-Barranco J, de Avila JLR, Reyes-Escobedo F, Celaya-Padilla JM, Galván-Tejada JI, Gamboa-Rosales H, Martínez-Acuña M, Cervantes-Villagrana A, Rivas-Santiago B, Gonzalez-Curiel IE. Persistence of COVID-19 Symptoms after Recovery in Mexican Population. Int J Environ Res Public Health 2020; 17:E9367. [PMID: 33327641 PMCID: PMC7765113 DOI: 10.3390/ijerph17249367] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/24/2020] [Revised: 11/19/2020] [Accepted: 12/02/2020] [Indexed: 12/13/2022]
Abstract
The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is responsible for the coronavirus disease (COVID-19), a highly contagious infectious disease that has caused many deaths worldwide. Despite global efforts, it continues to cause great losses, and leaving multiple unknowns that we must resolve in order to face the pandemic more effectively. One of the questions that has arisen recently is what happens, after recovering from COVID-19. For this reason, the objective of this study is to identify the risk of presenting persistent symptoms in recovered from COVID-19. This case-control study was conducted in one state of Mexico. Initially the data were obtained from the participants, through a questionnaire about symptoms that they had at the moment of the interview. Initially were captured the collected data, to make a dataset. After the pre-processed using the R project tool to eliminate outliers or missing data. Obtained finally a total of 219 participants, 141 recovered and 78 controls. It was used confidence level of 90% and a margin of error of 7%. From results it was obtained that all symptoms have an associated risk in those recovered. The relative risk of the selected symptoms in the recovered patients goes from 3 to 22 times, being infinite for the case of dyspnea, due to the fact that there is no control that presents this symptom at the moment of the interview, followed by the nausea and the anosmia with a RR of 8.5. Therefore, public health strategies must be rethought, to treat or rehabilitate, avoiding chronic problems in patients recovered from COVID-19.
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Affiliation(s)
- Carlos E. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.E.G.-T.); (K.E.V.-B.); (J.M.C.-P.); (J.I.G.-T.); (H.G.-R.)
| | - Cintya Fabiola Herrera-García
- Unidad Académica de Ciencias Químicas, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.F.H.-G.); (S.G.-G.); (K.H.-G.); (C.R.-Q); (F.R.-E.); (M.M.-A.); (A.C.-V.)
| | - Susana Godina-González
- Unidad Académica de Ciencias Químicas, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.F.H.-G.); (S.G.-G.); (K.H.-G.); (C.R.-Q); (F.R.-E.); (M.M.-A.); (A.C.-V.)
| | - Karen E. Villagrana-Bañuelos
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.E.G.-T.); (K.E.V.-B.); (J.M.C.-P.); (J.I.G.-T.); (H.G.-R.)
| | | | - Karla Herrera-García
- Unidad Académica de Ciencias Químicas, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.F.H.-G.); (S.G.-G.); (K.H.-G.); (C.R.-Q); (F.R.-E.); (M.M.-A.); (A.C.-V.)
| | - Carolina Rodríguez-Quiñones
- Unidad Académica de Ciencias Químicas, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.F.H.-G.); (S.G.-G.); (K.H.-G.); (C.R.-Q); (F.R.-E.); (M.M.-A.); (A.C.-V.)
| | | | | | - Jocelyn L. Ruiz de Avila
- Facultad de Medicina, Centro de Investigación en Ciencias de la Salud y Biomedicina (CICSaB), Universidad Autónoma de San Luis Potosí, San Luis Potosí 78300, Mexico;
| | - Fuensanta Reyes-Escobedo
- Unidad Académica de Ciencias Químicas, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.F.H.-G.); (S.G.-G.); (K.H.-G.); (C.R.-Q); (F.R.-E.); (M.M.-A.); (A.C.-V.)
| | - José M. Celaya-Padilla
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.E.G.-T.); (K.E.V.-B.); (J.M.C.-P.); (J.I.G.-T.); (H.G.-R.)
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.E.G.-T.); (K.E.V.-B.); (J.M.C.-P.); (J.I.G.-T.); (H.G.-R.)
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.E.G.-T.); (K.E.V.-B.); (J.M.C.-P.); (J.I.G.-T.); (H.G.-R.)
| | - Mónica Martínez-Acuña
- Unidad Académica de Ciencias Químicas, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.F.H.-G.); (S.G.-G.); (K.H.-G.); (C.R.-Q); (F.R.-E.); (M.M.-A.); (A.C.-V.)
| | - Alberto Cervantes-Villagrana
- Unidad Académica de Ciencias Químicas, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.F.H.-G.); (S.G.-G.); (K.H.-G.); (C.R.-Q); (F.R.-E.); (M.M.-A.); (A.C.-V.)
| | | | - Irma E. Gonzalez-Curiel
- Unidad Académica de Ciencias Químicas, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.F.H.-G.); (S.G.-G.); (K.H.-G.); (C.R.-Q); (F.R.-E.); (M.M.-A.); (A.C.-V.)
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16
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García-Domínguez A, Galvan-Tejada CE, Zanella-Calzada LA, Gamboa H, Galván-Tejada JI, Celaya Padilla JM, Luna-García H, Arceo-Olague JG, Magallanes-Quintanar R. Deep artificial neural network based on environmental sound data for the generation of a children activity classification model. PeerJ Comput Sci 2020; 6:e308. [PMID: 33816959 PMCID: PMC7924663 DOI: 10.7717/peerj-cs.308] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2020] [Accepted: 10/01/2020] [Indexed: 06/12/2023]
Abstract
Children activity recognition (CAR) is a subject for which numerous works have been developed in recent years, most of them focused on monitoring and safety. Commonly, these works use as data source different types of sensors that can interfere with the natural behavior of children, since these sensors are embedded in their clothes. This article proposes the use of environmental sound data for the creation of a children activity classification model, through the development of a deep artificial neural network (ANN). Initially, the ANN architecture is proposed, specifying its parameters and defining the necessary values for the creation of the classification model. The ANN is trained and tested in two ways: using a 70-30 approach (70% of the data for training and 30% for testing) and with a k-fold cross-validation approach. According to the results obtained in the two validation processes (70-30 splitting and k-fold cross validation), the ANN with the proposed architecture achieves an accuracy of 94.51% and 94.19%, respectively, which allows to conclude that the developed model using the ANN and its proposed architecture achieves significant accuracy in the children activity classification by analyzing environmental sound.
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Affiliation(s)
- Antonio García-Domínguez
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Zacatecas, Zacatecas, México
| | - Carlos E. Galvan-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Zacatecas, Zacatecas, México
| | | | - Hamurabi Gamboa
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Zacatecas, Zacatecas, México
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Zacatecas, Zacatecas, México
| | | | - Huizilopoztli Luna-García
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Zacatecas, Zacatecas, México
| | - Jose G. Arceo-Olague
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Zacatecas, Zacatecas, México
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17
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Galván-Tejada CE, Villagrana-Bañuelos KE, Zanella-Calzada LA, Moreno-Báez A, Luna-García H, Celaya-Padilla JM, Galván-Tejada JI, Gamboa-Rosales H. Univariate Analysis of Short-Chain Fatty Acids Related to Sudden Infant Death Syndrome. Diagnostics (Basel) 2020; 10:E896. [PMID: 33147746 PMCID: PMC7693700 DOI: 10.3390/diagnostics10110896] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2020] [Revised: 10/12/2020] [Accepted: 10/19/2020] [Indexed: 11/29/2022] Open
Abstract
Sudden infant death syndrome (SIDS) is defined as the death of a child under one year of age, during sleep, without apparent cause, after exhaustive investigation, so it is a diagnosis of exclusion. SIDS is the principal cause of death in industrialized countries. Inborn errors of metabolism (IEM) have been related to SIDS. These errors are a group of conditions characterized by the accumulation of toxic substances usually produced by an enzyme defect and there are thousands of them and included are the disorders of the β-oxidation cycle, similarly to what can affect the metabolism of different types of fatty acid chain (within these, short chain fatty acids (SCFAs)). In this work, an analysis of postmortem SCFAs profiles of children who died due to SIDS is proposed. Initially, a set of features containing SCFAs information, obtained from the NIH Common Fund's National Metabolomics Data Repository (NMDR) is submitted to an univariate analysis, developing a model based on the relationship between each feature and the binary output (death due to SIDS or not), obtaining 11 univariate models. Then, each model is validated, calculating their receiver operating characteristic curve (ROC curve) and area under the ROC curve (AUC) value. For those features whose models presented an AUC value higher than 0.650, a new multivariate model is constructed, in order to validate its behavior in comparison to the univariate models. In addition, a comparison between this multivariate model and a model developed based on the whole set of features is finally performed. From the results, it can be observed that each SCFA which comprises of the SFCAs profile, has a relationship with SIDS and could help in risk identification.
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Affiliation(s)
- Carlos E. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.E.G.-T.); (K.E.V.-B.); (A.M.-B.); (H.L.-G.); (J.M.C.-P.); (J.I.G.-T.)
| | - Karen E. Villagrana-Bañuelos
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.E.G.-T.); (K.E.V.-B.); (A.M.-B.); (H.L.-G.); (J.M.C.-P.); (J.I.G.-T.)
| | | | - Arturo Moreno-Báez
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.E.G.-T.); (K.E.V.-B.); (A.M.-B.); (H.L.-G.); (J.M.C.-P.); (J.I.G.-T.)
| | - Huizilopoztli Luna-García
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.E.G.-T.); (K.E.V.-B.); (A.M.-B.); (H.L.-G.); (J.M.C.-P.); (J.I.G.-T.)
| | - Jose M. Celaya-Padilla
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.E.G.-T.); (K.E.V.-B.); (A.M.-B.); (H.L.-G.); (J.M.C.-P.); (J.I.G.-T.)
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.E.G.-T.); (K.E.V.-B.); (A.M.-B.); (H.L.-G.); (J.M.C.-P.); (J.I.G.-T.)
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (C.E.G.-T.); (K.E.V.-B.); (A.M.-B.); (H.L.-G.); (J.M.C.-P.); (J.I.G.-T.)
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18
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Rodríguez-Ruiz JG, Galván-Tejada CE, Zanella-Calzada LA, Celaya-Padilla JM, Galván-Tejada JI, Gamboa-Rosales H, Luna-García H, Magallanes-Quintanar R, Soto-Murillo MA. Comparison of Night, Day and 24 h Motor Activity Data for the Classification of Depressive Episodes. Diagnostics (Basel) 2020; 10:E162. [PMID: 32192030 PMCID: PMC7151064 DOI: 10.3390/diagnostics10030162] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2019] [Revised: 02/14/2020] [Accepted: 02/17/2020] [Indexed: 12/30/2022] Open
Abstract
Major Depression Disease has been increasing in the last few years, affecting around 7 percent of the world population, but nowadays techniques to diagnose it are outdated and inefficient. Motor activity data in the last decade is presented as a better way to diagnose, treat and monitor patients suffering from this illness, this is achieved through the use of machine learning algorithms. Disturbances in the circadian rhythm of mental illness patients increase the effectiveness of the data mining process. In this paper, a comparison of motor activity data from the night, day and full day is carried out through a data mining process using the Random Forest classifier to identified depressive and non-depressive episodes. Data from Depressjon dataset is split into three different subsets and 24 features in time and frequency domain are extracted to select the best model to be used in the classification of depression episodes. The results showed that the best dataset and model to realize the classification of depressive episodes is the night motor activity data with 99.37% of sensitivity and 99.91% of specificity.
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Affiliation(s)
- Julieta G. Rodríguez-Ruiz
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (J.G.R.-R.); (H.L.-G.); (M.A.S.-M.)
| | - Carlos E. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (J.G.R.-R.); (H.L.-G.); (M.A.S.-M.)
| | | | - José M. Celaya-Padilla
- CONACYT, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico
| | - Jorge I. Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (J.G.R.-R.); (H.L.-G.); (M.A.S.-M.)
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (J.G.R.-R.); (H.L.-G.); (M.A.S.-M.)
| | - Huizilopoztli Luna-García
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (J.G.R.-R.); (H.L.-G.); (M.A.S.-M.)
| | - Rafael Magallanes-Quintanar
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (J.G.R.-R.); (H.L.-G.); (M.A.S.-M.)
| | - Manuel A. Soto-Murillo
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Mexico; (J.G.R.-R.); (H.L.-G.); (M.A.S.-M.)
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19
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Alcalá-Rmz V, Zanella-Calzada LA, Galván-Tejada CE, García-Hernández A, Cruz M, Valladares-Salgado A, Galván-Tejada JI, Gamboa-Rosales H. Identification of Diabetic Patients through Clinical and Para-Clinical Features in Mexico: An Approach Using Deep Neural Networks. Int J Environ Res Public Health 2019; 16:ijerph16030381. [PMID: 30700010 PMCID: PMC6388177 DOI: 10.3390/ijerph16030381] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/29/2018] [Revised: 01/20/2019] [Accepted: 01/21/2019] [Indexed: 01/16/2023]
Abstract
Diabetes is a chronic and noncommunicable but preventable disease that is affecting the Mexican population at worrying levels, being the first place in prevalence worldwide. Early diabetes detection has become important to prevent other health conditions that involve low organ yield until the patient death. Based on this problem, this work proposes the architecture of an Artificial Neural Network (ANN) for the automated classification of healthy patients from diabetics patients. The analysis was performed used a set of 19 para-clinical features to determine the health status of the patients. The developed model was evaluated through a statistical analysis based on the calculation of the loss function, accuracy, area under the curve (AUC) and receiving operating characteristics (ROC) curve. The results obtained present statistically significant values, with accuracy of 0.94 and AUC values of 0.98. Based on these results, it is possible to conclude that the ANN implemented in this work can classify patients with presence of diabetes from controls with significant accuracy, presenting preliminary results for the development of a diagnostic tool that can be supportive for health specialists.
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Affiliation(s)
- Vanessa Alcalá-Rmz
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zac, Mexico.
| | - Laura A Zanella-Calzada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zac, Mexico.
| | - Carlos E Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zac, Mexico.
| | - Alejandra García-Hernández
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zac, Mexico.
| | - Miguel Cruz
- Unidad de Investigación Médica en Bioquímica, Hospital de Especialidades, Centro Médico Nacional Siglo XXI, Instituto Mexicano del Seguro Social, Av. Cuauhtémoc 330, Col. Doctores, Del. Cuauhtémoc, Ciudad de México CP 06720, Mexico.
| | - Adan Valladares-Salgado
- Unidad de Investigación Médica en Bioquímica, Hospital de Especialidades, Centro Médico Nacional Siglo XXI, Instituto Mexicano del Seguro Social, Av. Cuauhtémoc 330, Col. Doctores, Del. Cuauhtémoc, Ciudad de México CP 06720, Mexico.
| | - Jorge I Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zac, Mexico.
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zac, Mexico.
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20
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Zanella-Calzada LA, Galván-Tejada CE, Chávez-Lamas NM, Rivas-Gutierrez J, Magallanes-Quintanar R, Celaya-Padilla JM, Galván-Tejada JI, Gamboa-Rosales H. Deep Artificial Neural Networks for the Diagnostic of Caries Using Socioeconomic and Nutritional Features as Determinants: Data from NHANES 2013⁻2014. Bioengineering (Basel) 2018; 5:bioengineering5020047. [PMID: 29912173 PMCID: PMC6027476 DOI: 10.3390/bioengineering5020047] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2018] [Revised: 06/07/2018] [Accepted: 06/15/2018] [Indexed: 12/03/2022] Open
Abstract
Oral health represents an essential component in the quality of life of people, being a determinant factor in general health since it may affect the risk of suffering other conditions, such as chronic diseases. Oral diseases have become one of the main public health problems, where dental caries is the condition that most affects oral health worldwide, occurring in about 90% of the global population. This condition has been considered a challenge because of its high prevalence, besides being a chronic but preventable disease which can be caused depending on the consumption of certain nutritional elements interacting simultaneously with different factors, such as socioeconomic factors. Based on this problem, an analysis of a set of 189 dietary and demographic determinants is performed in this work, in order to find the relationship between these factors and the oral situation of a set of subjects. The oral situation refers to the presence and absence/restorations of caries. The methodology is performed constructing a dense artificial neural network (ANN), as a computer-aided diagnosis tool, looking for a generalized model that allows for classifying subjects. As validation, the classification model was evaluated through a statistical analysis based on a cross validation, calculating the accuracy, loss function, receiving operating characteristic (ROC) curve and area under the curve (AUC) parameters. The results obtained were statistically significant, obtaining an accuracy ≃ 0.69 and AUC values of 0.69 and 0.75. Based on these results, it is possible to conclude that the classification model developed through the deep ANN is able to classify subjects with absence of caries from subjects with presence or restorations with high accuracy, according to their demographic and dietary factors.
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Affiliation(s)
- Laura A Zanella-Calzada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zac, México.
| | - Carlos E Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zac, México.
| | - Nubia M Chávez-Lamas
- Unidad Académica de Odontología, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zac, México.
| | - Jesús Rivas-Gutierrez
- Unidad Académica de Odontología, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zac, México.
| | - Rafael Magallanes-Quintanar
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zac, México.
| | - Jose M Celaya-Padilla
- CONACYT-Universidad Autónoma de Zacatecas-Jardín Juarez 147, Centro, Zacatecas 98000, Zac, Mexico.
| | - Jorge I Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zac, México.
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zac, México.
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21
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Martinez-Fierro ML, Hernández-Delgadillo GP, Flores-Morales V, Cardenas-Vargas E, Mercado-Reyes M, Rodriguez-Sanchez IP, Delgado-Enciso I, Galván-Tejada CE, Galván-Tejada JI, Celaya-Padilla JM, Garza-Veloz I. Current model systems for the study of preeclampsia. Exp Biol Med (Maywood) 2018; 243:576-585. [PMID: 29415560 DOI: 10.1177/1535370218755690] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
Abstract
Preeclampsia (PE) is a pregnancy complex disease, distinguished by high blood pressure and proteinuria, diagnosed after the 20th gestation week. Depending on the values of blood pressure, urine protein concentrations, symptomatology, and onset of disease there is a wide range of phenotypes, from mild forms developing predominantly at the end of pregnancy to severe forms developing in the early stage of pregnancy. In the worst cases severe forms of PE could lead to systemic endothelial dysfunction, eclampsia, and maternal and/or fetal death. Worldwide the fetal morbidity and mortality related to PE is calculated to be around 8% of the total pregnancies. PE still being an enigma regarding its etiology and pathophysiology, in general a deficient trophoblast invasion during placentation at first stage of pregnancy, in combination with maternal conditions are accepted as a cause of endothelial dysfunction, inflammatory alterations and appearance of symptoms. Depending on the PE multifactorial origin, several in vitro, in vivo, and in silico models have been used to evaluate the PE pathophysiology as well as to identify or test biomarkers predicting, diagnosing or prognosing the syndrome. This review focuses on the most common models used for the study of PE, including those related to placental development, abnormal trophoblast invasion, uteroplacental ischemia, angiogenesis, oxygen deregulation, and immune response to maternal-fetal interactions. The advances in mathematical and computational modeling of metabolic network behavior, gene prioritization, the protein-protein interaction network, the genetics of PE, and the PE prediction/classification are discussed. Finally, the potential of these models to enable understanding of PE pathogenesis and to evaluate new preventative and therapeutic approaches in the management of PE are also highlighted. Impact statement This review is important to the field of preeclampsia (PE), because it provides a description of the principal in vitro, in vivo, and in silico models developed for the study of its principal aspects, and to test emerging therapies or biomarkers predicting the syndrome before their evaluation in clinical trials. Despite the current advance, the field still lacking of new methods and original modeling approaches that leads to new knowledge about pathophysiology. The part of in silico models described in this review has not been considered in the previous reports.
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Affiliation(s)
- M L Martinez-Fierro
- 1 Molecular Medicine Laboratory, Unidad Académica de Medicina Humana y Ciencias de la Salud, Universidad Autónoma de Zacatecas, 98160 Zacatecas, México.,2 Posgrado en Ingeniería y Tecnología Aplicada, Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, 98000 Zacatecas, México
| | - G P Hernández-Delgadillo
- 3 Laboratorio de Investigación en Farmacología, 27779 Universidad Autónoma de Zacatecas , 98160 Zacatecas, México
| | - V Flores-Morales
- 4 Laboratorio de Síntesis Asimétrica y Bioenergética (LSAyB), 27779 Universidad Autónoma de Zacatecas , 98160 Zacatecas, México
| | - E Cardenas-Vargas
- 1 Molecular Medicine Laboratory, Unidad Académica de Medicina Humana y Ciencias de la Salud, Universidad Autónoma de Zacatecas, 98160 Zacatecas, México.,5 Hospital General Zacatecas "Luz Gonzalez Cosio", Secretaria de Salud de Zacatecas, 98160 Zacatecas, México
| | - M Mercado-Reyes
- 6 Laboratorio de Biología de la Conservación, Unidad Académica de Ciencias Biológicas, 27779 Universidad Autónoma de Zacatecas , 98060 Zacatecas, México
| | - I P Rodriguez-Sanchez
- 7 Departamento de Génetica, Facultad de Medicina, Universidad Autonoma de Nuevo Leon, 64460 Monterrey, México
| | - I Delgado-Enciso
- 8 Faculty of Medicine, Universidad de Colima, 28040 Colima, Mexico.,9 State Cancer Institute, Health Secretary of Colima, 28060 Colima, Mexico
| | - C E Galván-Tejada
- 10 Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, 98000 Zacatecas, México
| | - J I Galván-Tejada
- 10 Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, 98000 Zacatecas, México
| | - J M Celaya-Padilla
- 10 Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, 98000 Zacatecas, México.,11 CONACYT - Universidad Autónoma de Zacatecas, 98000 Zacatecas, México
| | - I Garza-Veloz
- 1 Molecular Medicine Laboratory, Unidad Académica de Medicina Humana y Ciencias de la Salud, Universidad Autónoma de Zacatecas, 98160 Zacatecas, México.,2 Posgrado en Ingeniería y Tecnología Aplicada, Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, 98000 Zacatecas, México
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22
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Celaya-Padilla JM, Galván-Tejada CE, López-Monteagudo FE, Alonso-González O, Moreno-Báez A, Martínez-Torteya A, Galván-Tejada JI, Arceo-Olague JG, Luna-García H, Gamboa-Rosales H. Speed Bump Detection Using Accelerometric Features: A Genetic Algorithm Approach. Sensors (Basel) 2018; 18:s18020443. [PMID: 29401637 PMCID: PMC5856042 DOI: 10.3390/s18020443] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/10/2017] [Revised: 01/05/2018] [Accepted: 01/05/2018] [Indexed: 11/16/2022]
Abstract
Among the current challenges of the Smart City, traffic management and maintenance are of utmost importance. Road surface monitoring is currently performed by humans, but the road surface condition is one of the main indicators of road quality, and it may drastically affect fuel consumption and the safety of both drivers and pedestrians. Abnormalities in the road, such as manholes and potholes, can cause accidents when not identified by the drivers. Furthermore, human-induced abnormalities, such as speed bumps, could also cause accidents. In addition, while said obstacles ought to be signalized according to specific road regulation, they are not always correctly labeled. Therefore, we developed a novel method for the detection of road abnormalities (i.e., speed bumps). This method makes use of a gyro, an accelerometer, and a GPS sensor mounted in a car. After having the vehicle cruise through several streets, data is retrieved from the sensors. Then, using a cross-validation strategy, a genetic algorithm is used to find a logistic model that accurately detects road abnormalities. The proposed model had an accuracy of 0.9714 in a blind evaluation, with a false positive rate smaller than 0.018, and an area under the receiver operating characteristic curve of 0.9784. This methodology has the potential to detect speed bumps in quasi real-time conditions, and can be used to construct a real-time surface monitoring system.
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Affiliation(s)
- Jose M Celaya-Padilla
- Unidad Académica de Ingeniería Eléctrica, CONACyT-Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro Histórico, 98000 Zacatecas, Mexico.
| | - Carlos E Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro Histórico, 98000 Zacatecas, Mexico.
| | - F E López-Monteagudo
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro Histórico, 98000 Zacatecas, Mexico.
| | - O Alonso-González
- Unidad Académica de Ingeniería I, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro Histórico, 98000 Zacatecas, Mexico.
| | - Arturo Moreno-Báez
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro Histórico, 98000 Zacatecas, Mexico.
| | - Antonio Martínez-Torteya
- Departamento de ingeniería, Universidad de Monterrey, Avenida Ignacio Morones Prieto 4500 Pte., Jesús M. Garza, 66238, San Pedro Garza García, Nuevo León, Mexico.
| | - Jorge I Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro Histórico, 98000 Zacatecas, Mexico.
| | - Jose G Arceo-Olague
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro Histórico, 98000 Zacatecas, Mexico.
| | - Huizilopoztli Luna-García
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro Histórico, 98000 Zacatecas, Mexico.
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juárez 147, Centro Histórico, 98000 Zacatecas, Mexico.
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23
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García-Hernández A, Galván-Tejada CE, Galván-Tejada JI, Celaya-Padilla JM, Gamboa-Rosales H, Velasco-Elizondo P, Cárdenas-Vargas R. [-25]A Similarity Analysis of Audio Signal to Develop a Human Activity Recognition Using Similarity Networks. Sensors (Basel) 2017; 17:s17112688. [PMID: 29160799 PMCID: PMC5713102 DOI: 10.3390/s17112688] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/14/2017] [Revised: 11/01/2017] [Accepted: 11/16/2017] [Indexed: 11/16/2022]
Abstract
Human Activity Recognition (HAR) is one of the main subjects of study in the areas of computer vision and machine learning due to the great benefits that can be achieved. Examples of the study areas are: health prevention, security and surveillance, automotive research, and many others. The proposed approaches are carried out using machine learning techniques and present good results. However, it is difficult to observe how the descriptors of human activities are grouped. In order to obtain a better understanding of the the behavior of descriptors, it is important to improve the abilities to recognize the human activities. This paper proposes a novel approach for the HAR based on acoustic data and similarity networks. In this approach, we were able to characterize the sound of the activities and identify those activities looking for similarity in the sound pattern. We evaluated the similarity of the sounds considering mainly two features: the sound location and the materials that were used. As a result, the materials are a good reference classifying the human activities compared with the location.
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Affiliation(s)
- Alejandra García-Hernández
- Academic Unit of Electrical Engineering, Autonomous University of Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zacatecas, Mexico.
| | - Carlos E Galván-Tejada
- Academic Unit of Electrical Engineering, Autonomous University of Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zacatecas, Mexico.
| | - Jorge I Galván-Tejada
- Academic Unit of Electrical Engineering, Autonomous University of Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zacatecas, Mexico.
| | - José M Celaya-Padilla
- CONACyT-Academic Unit of Electrical Engineering, Autonomous University of Zacatecas , Jardín Juarez 147, Centro, Zacatecas 98000, Zacatecas, Mexico.
| | - Hamurabi Gamboa-Rosales
- Academic Unit of Electrical Engineering, Autonomous University of Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zacatecas, Mexico.
| | - Perla Velasco-Elizondo
- Academic Unit of Electrical Engineering, Autonomous University of Zacatecas, Jardín Juarez 147, Centro, Zacatecas 98000, Zacatecas, Mexico.
| | - Rogelio Cárdenas-Vargas
- Chemical Engineering Program, Autonomous University of Zacatecas, Ciudad Universitaria Siglo XXI, Carretera Zacatecas-Guadalajara Km. 6, Ejido La Escondida, Zacatecas 98160, Zacatecas, Mexico.
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24
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Galván-Tejada CE, Zanella-Calzada LA, Galván-Tejada JI, Celaya-Padilla JM, Gamboa-Rosales H, Garza-Veloz I, Martinez-Fierro ML. Multivariate Feature Selection of Image Descriptors Data for Breast Cancer with Computer-Assisted Diagnosis. Diagnostics (Basel) 2017; 7:diagnostics7010009. [PMID: 28216571 PMCID: PMC5373018 DOI: 10.3390/diagnostics7010009] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2016] [Revised: 01/17/2017] [Accepted: 02/09/2017] [Indexed: 01/03/2023] Open
Abstract
Breast cancer is an important global health problem, and the most common type of cancer among women. Late diagnosis significantly decreases the survival rate of the patient; however, using mammography for early detection has been demonstrated to be a very important tool increasing the survival rate. The purpose of this paper is to obtain a multivariate model to classify benign and malignant tumor lesions using a computer-assisted diagnosis with a genetic algorithm in training and test datasets from mammography image features. A multivariate search was conducted to obtain predictive models with different approaches, in order to compare and validate results. The multivariate models were constructed using: Random Forest, Nearest centroid, and K-Nearest Neighbor (K-NN) strategies as cost function in a genetic algorithm applied to the features in the BCDR public databases. Results suggest that the two texture descriptor features obtained in the multivariate model have a similar or better prediction capability to classify the data outcome compared with the multivariate model composed of all the features, according to their fitness value. This model can help to reduce the workload of radiologists and present a second opinion in the classification of tumor lesions.
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Affiliation(s)
- Carlos E Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, 98000 Zacatecas, Zac, Mexico.
| | - Laura A Zanella-Calzada
- Facultad de Ciencias, Universidad Autónoma de San Luis Potosí, Lateral Av. Salvador Nava s/n., 78290 San Luis Potosí, SLP, Mexico.
| | - Jorge I Galván-Tejada
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, 98000 Zacatecas, Zac, Mexico.
| | - José M Celaya-Padilla
- CONACYT - Universidad Autónoma de Zacatecas - Jardín Juarez 147, Centro, 98000 Zacatecas, Zac, Mexico.
| | - Hamurabi Gamboa-Rosales
- Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, 98000 Zacatecas, Zac, Mexico.
| | - Idalia Garza-Veloz
- Unidad Académica de Medicina Humana y Ciencias de la Salud, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, 98000 Zacatecas, Zac, Mexico.
| | - Margarita L Martinez-Fierro
- Unidad Académica de Medicina Humana y Ciencias de la Salud, Universidad Autónoma de Zacatecas, Jardín Juarez 147, Centro, 98000 Zacatecas, Zac, Mexico.
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25
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Galván-Tejada CE, García-Vázquez JP, Galván-Tejada JI, Delgado-Contreras JR, Brena RF. Infrastructure-Less Indoor Localization Using the Microphone, Magnetometer and Light Sensor of a Smartphone. Sensors (Basel) 2015; 15:20355-72. [PMID: 26295237 PMCID: PMC4570425 DOI: 10.3390/s150820355] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/02/2015] [Revised: 08/07/2015] [Accepted: 08/11/2015] [Indexed: 11/16/2022]
Abstract
In this paper, we present the development of an infrastructure-less indoor location system (ILS), which relies on the use of a microphone, a magnetometer and a light sensor of a smartphone, all three of which are essentially passive sensors, relying on signals available practically in any building in the world, no matter how developed the region is. In our work, we merge the information from those sensors to estimate the user's location in an indoor environment. A multivariate model is applied to find the user's location, and we evaluate the quality of the resulting model in terms of sensitivity and specificity. Our experiments were carried out in an office environment during summer and winter, to take into account changes in light patterns, as well as changes in the Earth's magnetic field irregularities. The experimental results clearly show the benefits of using the information fusion of multiple sensors when contrasted with the use of a single source of information.
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Affiliation(s)
- Carlos E Galván-Tejada
- Programa de Ingeniería de Software, Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas, Ciudad Universitaria Siglo XXI, Edificio de Ingeniería de Software e Ingeniería en Computación, Zacatecas 98160, Mexico.
| | - Juan Pablo García-Vázquez
- School of Engineering, MyDCI, Autonomous University of Baja California (UABC), Mexicali 21100, Mexico.
| | - Jorge I Galván-Tejada
- Ingeniería Robótica y Mecatrónica, Unidad Académica de Ingeniería Eléctrica, Universidad Autónoma de Zacatecas "Francisco Garcia Salinas", Zacatecas 98000, Mexico.
| | - J Rubén Delgado-Contreras
- Graduate School of Engineering and Science, Instituto Tecnológico de Monterrey, CETEC South, 5th Floor, Av. E. Garza Sada 2501, Monterrey, NL 64849, Mexico.
| | - Ramon F Brena
- Graduate School of Engineering and Science, Instituto Tecnológico de Monterrey, CETEC South, 5th Floor, Av. E. Garza Sada 2501, Monterrey, NL 64849, Mexico.
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26
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Martinez-Torteya A, Rodriguez-Rojas J, Celaya-Padilla JM, Galván-Tejada JI, Treviño V, Tamez-Peña J. Magnetization-prepared rapid acquisition with gradient echo magnetic resonance imaging signal and texture features for the prediction of mild cognitive impairment to Alzheimer's disease progression. J Med Imaging (Bellingham) 2014; 1:031005. [PMID: 26158047 DOI: 10.1117/1.jmi.1.3.031005] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2014] [Revised: 07/27/2014] [Accepted: 08/22/2014] [Indexed: 01/31/2023] Open
Abstract
Early diagnoses of Alzheimer's disease (AD) would confer many benefits. Several biomarkers have been proposed to achieve such a task, where features extracted from magnetic resonance imaging (MRI) have played an important role. However, studies have focused exclusively on morphological characteristics. This study aims to determine whether features relating to the signal and texture of the image could predict mild cognitive impairment (MCI) to AD progression. Clinical, biological, and positron emission tomography information and MRI images of 62 subjects from the AD neuroimaging initiative were used in this study, extracting 4150 features from each MRI. Within this multimodal database, a feature selection algorithm was used to obtain an accurate and small logistic regression model, generated by a methodology that yielded a mean blind test accuracy of 0.79. This model included six features, five of them obtained from the MRI images, and one obtained from genotyping. A risk analysis divided the subjects into low-risk and high-risk groups according to a prognostic index. The groups were statistically different ([Formula: see text]). These results demonstrated that MRI features related to both signal and texture add MCI to AD predictive power, and supported the ongoing notion that multimodal biomarkers outperform single-modality ones.
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Affiliation(s)
- Antonio Martinez-Torteya
- Tecnológico de Monterrey , Cátedra de Bioinformática, Escuela de Ingeniería, Departamento de Ciencias Computacionales, Monterrey 64849, Mexico
| | - Juan Rodriguez-Rojas
- Tecnológico de Monterrey , Cátedra de Bioinformática, Escuela de Ingeniería, Departamento de Ciencias Computacionales, Monterrey 64849, Mexico
| | - José M Celaya-Padilla
- Tecnológico de Monterrey , Cátedra de Bioinformática, Escuela de Ingeniería, Departamento de Ciencias Computacionales, Monterrey 64849, Mexico
| | - Jorge I Galván-Tejada
- Tecnológico de Monterrey , Cátedra de Bioinformática, Escuela de Ingeniería, Departamento de Ciencias Computacionales, Monterrey 64849, Mexico
| | - Victor Treviño
- Tecnológico de Monterrey , Cátedra de Bioinformática, Escuela de Ingeniería, Departamento de Ciencias Computacionales, Monterrey 64849, Mexico ; Tecnológico de Monterrey , Cátedra de Bioinformática, Escuela de Medicina, Departamento de Investigación e Innovación, Monterrey 64710, Mexico
| | - Jose Tamez-Peña
- Tecnológico de Monterrey , Cátedra de Bioinformática, Escuela de Ingeniería, Departamento de Ciencias Computacionales, Monterrey 64849, Mexico ; Tecnológico de Monterrey , Cátedra de Bioinformática, Escuela de Medicina, Departamento de Investigación e Innovación, Monterrey 64710, Mexico
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