Understanding context dependency in the response of forest understorey plant communities to nitrogen deposition

The ecological niche characteristics and interspecific associations of plant species in the alpine meadow of the Tibetan Plateau affected plant species diversity under nitrogen addition

Background

Plant species diversity is of great significance to maintain the structure and function of the grassland ecosystem. Analyzing community niche and interspecific associations is crucial for understanding changes in plant species diversity. However, there are few studies on the response of plant species diversity, species niche characteristics, and interspecific relationships to nitrogen addition in alpine meadows on the Qinghai-Tibet Plateau.

Methods

This study investigates the effects of different levels of nitrogen addition (0, 15, 30, 45, and 60 g N m-2) on plant species diversity, functional group importance values, niche width, niche overlap, and interspecific associations in an alpine meadow.

Results

1) Compared with the control (CK), the Shannon-Weiner index and species richness index significantly increased by 11.36% and 30.77%, respectively, with nitrogen addition at 30 g N m-2, while both indices significantly decreased by 14.48% and 23.08%, respectively, at 60 g N m-2. As nitrogen addition increased, the importance value of grasses showed an upward trend, whereas the importance value of sedges showed a decline. 2) The niche width of Poa pratensis L., Elymus nutans Griseb., and Stipa purpurea Griseb. are increased with higher nitrogen addition. As nitrogen addition increases, the niche overlap values also show a rising trend. At 60 g N m-2, the overall community association in the alpine meadow exhibited a significant negative correlation. These findings suggest that grasses exhibit strong ecological adaptability under high nitrogen addition and gain a competitive advantage in spatial competition, increasing their niche width. Moreover, as nitrogen levels increase, the importance values of grasses rise significantly, and their ecological characteristics become more similar, resulting in reduced niche overlap among plant species. Furthermore, high nitrogen addition intensifies interspecific competition between grasses, sedges, and forbs, disrupting the original balance and reducing species diversity. These insights provide a valuable understanding of changes in species diversity and competitive dynamics in alpine meadow plant communities under high nitrogen addition.

Trade-offs in biodiversity and ecosystem services between edges and interiors in European forests

Forest biodiversity and ecosystem services are hitherto predominantly quantified in forest interiors, well away from edges. However, these edges also represent a substantial proportion of the global forest cover. Here we quantified plant biodiversity and ecosystem service indicators in 225 plots along forest edge-to-interior transects across Europe. We found strong trade-offs: phylogenetic diversity (evolutionary measure of biodiversity), proportion of forest specialists, decomposition and heatwave buffering increased towards the interior, whereas species richness, nectar production potential, stemwood biomass and tree regeneration decreased. These trade-offs were mainly driven by edge-to-interior structural differences. As fragmentation continues, recognizing the role of forest edges is crucial for integrating biodiversity and ecosystem service considerations into sustainable forest management and policy.

Long-term shift towards shady and nutrient-rich habitats in Central European temperate forests

Biodiversity world-wide has been under increasing anthropogenic pressure in the past century. The long-term response of biotic communities has been tackled primarily by focusing on species richness, community composition and functionality. Equally important are shifts between entire communities and habitat types, which remain an unexplored level of biodiversity change. We have resurveyed > 2000 vegetation plots in temperate forests in central Europe to capture changes over an average of five decades. The plots were assigned to eight broad forest habitat types using an algorithmic classification system. We analysed transitions between the habitat types and interpreted the trend in terms of changes in environmental conditions. We identified a directional shift along the combined gradients of canopy openness and soil nutrients. Nutrient-poor open-canopy forest habitats have declined strongly in favour of fertile closed-canopy habitats. However, the shift was not uniform across the whole gradients. We conclude that the shifts in habitat types represent a century-long successional trend with significant consequences for forest biodiversity. Open forest habitats should be urgently targeted for plant diversity restoration through the implementation of active management. The approach presented here can be applied to other habitat types and at different spatio-temporal scales.

A dual-mode biosensor featuring single-atom Fe nanozyme for multi-pesticide detection in vegetables

The single-atom iron nanozyme (SA-Fe-NZ) exhibits high catalytic activity and excellent electron transfer efficiency in biosensors. However, the binding of bioreceptors to the surface of SA-Fe-NZ results in a decrease in the catalytic activity of the nanozyme due to its toxic effects. We utilized the toxic effects and excellent electrochemical properties of the SA-Fe-NZ to successfully construct a smartphone-assisted dual-mode biosensor. The complex formed by the binding of organophosphorus pesticides (OPs) to the aptamer exhibited toxic effects and inhibited the catalytic activity of the nanozyme, preventing the colorimetric substrate from being catalyzed. Simultaneously, the aptamers labeled with electrochemical signal molecules approached the electrode surface, causing a change in the electrochemical signal. The results demonstrated that the constructed broad-spectrum aptamer biosensor exhibited a low limit of detection of 3.55 fM and a wide linear range of 10-13-10-2 M, allowing for qualitative and quantitative detection of multiple OPs in vegetables.

Long-Term Vegetation Changes and Socioeconomic Effects of River Engineering in Industrialized Areas (Southern Poland)

The exploitation of mineral resources associated with human mining activities leads to the degradation of both terrestrial and aquatic biocenotic systems. The drastic disturbance of water relations as a result of the relocation of the riverbed of the Biala Przemsza River (southern Poland) for coal and filler sand mining will lead to changes in plant ecosystems. The purpose of this study was to determine and compare the diversity and distribution of vegetation in the Biała Przemsza valley in sections of channel straightening with the old riverbed and areas undisturbed by engineering works against the background of land use in temporal and spatial aspects. The results of the ecological and phytosociological studies showed that the composition of flora and vegetation types varied. Within the transformed riverbed, anthropogenic mixed forests with species characteristic of different ecological systems are developing, whereas the non-regulated section of the river is overgrown by an alder riparian forest with an almost complete species composition for this plant community. The highest Simpson's biodiversity index was found in the anthropogenically disturbed section of the river (0.86), and in the undisturbed section, it was 0.83. Both sections of the river were dominated by species of the family Compositae, Poaceae, Caryophyllaceae, Rosaceae and Apiaceae. The diversity of the flora in the transformed sections of the valley is determined by the presence of mosaics and microhabitats, as well as the nature of the surrounding vegetation, which is reflected in the ecological requirements of the flora concerning light preference (moderate light [56.25%]), and almost 90% of the flora from the area of the regulated section of the valley develops on humus-poor and mineral-humus soils. Although this area has lost its original natural function, it is now valuable for selected economic and social functions, especially in highly urbanized regions.

Divergent roles of herbivory in eutrophying forests

Ungulate populations are increasing across Europe with important implications for forest plant communities. Concurrently, atmospheric nitrogen (N) deposition continues to eutrophicate forests, threatening many rare, often more nutrient-efficient, plant species. These pressures may critically interact to shape biodiversity as in grassland and tundra systems, yet any potential interactions in forests remain poorly understood. Here, we combined vegetation resurveys from 52 sites across 13 European countries to test how changes in ungulate herbivory and eutrophication drive long-term changes in forest understorey communities. Increases in herbivory were associated with elevated temporal species turnover, however, identities of winner and loser species depended on N levels. Under low levels of N-deposition, herbivory favored threatened and small-ranged species while reducing the proportion of non-native and nutrient-demanding species. Yet all these trends were reversed under high levels of N-deposition. Herbivores also reduced shrub cover, likely exacerbating N effects by increasing light levels in the understorey. Eutrophication levels may therefore determine whether herbivory acts as a catalyst for the "N time bomb" or as a conservation tool in temperate forests.

ReSurveyGermany: Vegetation-plot time-series over the past hundred years in Germany

Vegetation-plot resurvey data are a main source of information on terrestrial biodiversity change, with records reaching back more than one century. Although more and more data from re-sampled plots have been published, there is not yet a comprehensive open-access dataset available for analysis. Here, we compiled and harmonised vegetation-plot resurvey data from Germany covering almost 100 years. We show the distribution of the plot data in space, time and across habitat types of the European Nature Information System (EUNIS). In addition, we include metadata on geographic location, plot size and vegetation structure. The data allow temporal biodiversity change to be assessed at the community scale, reaching back further into the past than most comparable data yet available. They also enable tracking changes in the incidence and distribution of individual species across Germany. In summary, the data come at a level of detail that holds promise for broadening our understanding of the mechanisms and drivers behind plant diversity change over the last century.

Changes in Species and Functional Diversity of the Herb Layer of Riparian Forest despite Six Decades of Strict Protection

The herb layer of temperate forests contributes to long-term forest ecosystem functioning and provisioning of ecosystem services. Therefore, a thorough understanding of its dynamics in the face of environmental changes is essential. This paper focuses on the species and functional diversity of the herb layer of riparian forests to verify how these two community components changed over time and under strict protection. The understory vegetation was surveyed on 42 semi-permanent plots in three time periods between 1960 and 2020. The overall pattern in vegetation changes that related to species richness and diversity, functional structure, and habitat conditions was analyzed using ordination and permutation techniques. We found significant changes in species composition and the functional structure of herbaceous vegetation over the last six decades. Forests were enriched with nutrient-demanding and alien species. A significant increase in functional diversity and the proportion of species with high SLA and canopy height was also observed, whereas changes in habitat conditions were insignificant. The observed trends indicate that the strict protection of forest communities within small and isolated reserves does not fully protect their species composition. Forest reserves should be surrounded by unmanaged forests and spatially connected to allow species mobility.

Estimating historic N- and S-deposition with publicly available data - An example from Central Germany

The deposition of reactive nitrogen and sulphur has profound effects on ecosystem functioning. In the last decades, monitoring networks providing high resolution spatio-temporal deposition estimates have been set up, but equivalent information on historic deposition is mostly missing. However, understanding vegetation change and mitigate future loss of biodiversity and ecosystem functioning is only possible evaluating the effects of its strongest drivers, which includes deposition in many ecosystems. Here, we combine different data sources to provide estimates of historic deposition in forested ecosystems on a high spatio-temporal scale for a federal state in Central Germany from 1880 to present. We make use of data from field measurement stations together with elevation and precipitation data from the last three decades to build a simple deposition model, validate this model with a model publicly available covering the time range from 2000 to present, and extrapolate deposition from this joint model to the past using European deposition trends from the last 150 years. Our approach can easily be adapted to other data and spatial areas shows how to use raw deposition data together with publicly available data on elevation and precipitation to construct simple deposition models covering recent and historic times in areas and for times for which no data are available.

The gap between atmospheric nitrogen deposition experiments and reality

Anthropogenic activities have dramatically altered the global nitrogen (N) cycle. Atmospheric N deposition, primarily from combustion of biomass and fossil fuels, has caused acidification of precipitation and freshwater, and triggered intense research into ecosystem responses to this pollutant. Experimental simulations of N deposition have been the main scientific tool to understand ecosystem responses, revealing dramatic impacts on soil microbes, plants, and higher trophic levels. However, comparison of the experimental treatments applied in the vast majority of studies with observational and modelled N deposition reveals a wide gulf between research and reality. While the majority of experimental treatments exceed 100 kg N ha^-1 y^-1, global median land surface deposition rates are around 1 kg N ha^-1 y^-1 and only exceed 10 kg N ha^-1 y^-1 in certain regions, primarily in industrialized areas of Europe and Asia and particularly in forests. Experimental N deposition treatments are in fact similar to mineral fertilizer application rates in agriculture. Some ecological guilds, such as saprotrophic fungi, are highly sensitive to N and respond differently to low and high N availability. In addition, very high levels of N application cause changes in soil chemistry, such as acidification, meaning that unrealistic experimental treatments are unlikely to reveal true ecosystem responses to N. Hence, despite decades of research, past experiments can tell us little about how the biosphere has responded to anthropogenic N deposition. A new approach is required to improve our understanding of this important phenomenon. First, characterization of N response functions using observed N deposition gradients. Second, application of experimental N addition gradients at realistic levels over long periods to detect cumulative effects. Third, application of non-linear meta-regressions to detect non-linear responses in meta-analyses of experimental studies.

Threshold effects of air pollution and climate change on understory plant communities at forested sites in the eastern United States

Forest understory plant communities in the eastern United States are often diverse and are potentially sensitive to changes in climate and atmospheric inputs of nitrogen caused by air pollution. In recent years, empirical and processed-based mathematical models have been developed to investigate such changes in plant communities. In the study reported here, a robust set of understory vegetation response functions (expressed as version 2 of the Probability of Occurrence of Plant Species model for the United States [US-PROPS v2]) was developed based on observations of forest understory and grassland plant species presence/absence and associated abiotic characteristics derived from spatial datasets. Improvements to the US-PROPS model, relative to version 1, were mostly focused on inclusion of additional input data, development of custom species-level input datasets, and implementation of methods to address uncertainty. We investigated the application of US-PROPS v2 to evaluate the potential impacts of atmospheric nitrogen (N) and sulfur (S) deposition, and climate change on forest ecosystems at three forested sites located in New Hampshire, Virginia, and Tennessee in the eastern United States. Species-level N and S critical loads (CLs) were determined under ambient deposition at all three modeled sites. The lowest species-level CLs of N deposition at each site were between 2 and 11 kg N/ha/yr. Similarly, the lowest CLs of S deposition, based on the predicted soil pH response, were less than 2 kg S/ha/yr among the three sites. Critical load exceedance was found at all three model sites. The New Hampshire site included the largest percentage of species in exceedance. Simulated warming air temperature typically resulted in lower maximum occurrence probability, which contributed to lower CLs of N and S deposition. The US-PROPS v2 model, together with the PROPS-CLF model to derive CL functions, can be used to develop site-specific CLs for understory plants within broad regions of the United States. This study demonstrates that species-level CLs of N and S deposition are spatially variable according to the climate, light availability, and soil characteristics at a given location. Although the species niche models generally performed well in predicting occurrence probability, there remains uncertainty with respect to the accuracy of reported CLs. As such, the specific CLs reported here should be considered as preliminary estimates.

Individualistic responses of forest herb traits to environmental change

Intraspecific trait variation (ITV; i.e. variability in mean and/or distribution of plant attribute values within species) can occur in response to multiple drivers. Environmental change and land-use legacies could directly alter trait values within species but could also affect them indirectly through changes in vegetation cover. Increasing variability in environmental conditions could lead to more ITV, but responses might differ among species. Disentangling these drivers on ITV is necessary to accurately predict plant community responses to global change. We planted herb communities into forest soils with and without a recent history of agriculture. Soils were collected across temperate European regions, while the 15 selected herb species had different colonizing abilities and affinities to forest habitat. These mesocosms (384) were exposed to two-level full-factorial treatments of warming, nitrogen addition and illumination. We measured plant height and specific leaf area (SLA). For the majority of species, mean plant height increased as vegetation cover increased in response to light addition, warming and agricultural legacy. The coefficient of variation (CV) for height was larger in fast-colonizing species. Mean SLA for vernal species increased with warming, while light addition generally decreased mean SLA for shade-tolerant species. Interactions between treatments were not important predictors. Environmental change treatments influenced ITV, either via increasing vegetation cover or by affecting trait values directly. Species' ITV was individualistic, i.e. species responded to different single resource and condition manipulations that benefited their growth in the short term. These individual responses could be important for altered community organization after a prolonged period.

Forest mosses sensitively indicate nitrogen deposition in boreal background areas

Mosses take up nitrogen (N) mainly from precipitation through their surfaces, which makes them competent bioindicators of N deposition. We found positive relationships between the total N concentration (mossN%) of common terrestrial moss species (feather mosses Pleurozium schreberi and Hylocomium splendens, and a group of Dicranum species) and different forms of N deposition in 11-16 coniferous forests with low N deposition load in Finland. The mosses were collected either inside (Dicranum group) or both inside and outside (feather mosses) the forests. Deposition was monitored in situ as bulk deposition (BD) and stand throughfall (TF) and detected for ammonium (NH₄⁺-N), nitrate (NO₃^--N), dissolved organic N (DON), and total N (N_tot, kg ha^-1yr^-1). N_tot deposition was lower in TF than BD indicating that tree canopies absorbed N from deposition in N limited boreal stands. However, mossN% was higher inside than outside the forests. In regression equations, inorganic N in BD predicted best the mossN% in openings, while DON in TF explained most variation of mossN% in forests. An asymptotic form of mossN% vs. TF N_tot curves in forests and free NH₄⁺-N accumulation in tissues in the southern plots suggested mosses were near the N saturation state already at the N_tot deposition level of 3-5 kg ha^-1yr^-1. N leachate from ground litterfall apparently also contributed the N supply of mosses. Our study yielded new information on the sensitivity of boreal mosses to low N deposition and their response to different N forms in canopy TF entering moss layer. The equations predicting the N_tot deposition with mossN% showed a good fit both in forest sites and openings, especially in case of P. schreberi. However, the open site mossN% is a preferable predictor of N deposition in monitoring studies to minimize the effect of tree canopies and N leachate from litterfall on the estimates.

Plant functional trait response to environmental drivers across European temperate forest understorey communities

Functional traits respond to environmental drivers, hence evaluating trait-environment relationships across spatial environmental gradients can help to understand how multiple drivers influence plant communities. Global-change drivers such as changes in atmospheric nitrogen deposition occur worldwide, but affect community trait distributions at the local scale, where resources (e.g. light availability) and conditions (e.g. soil pH) also influence plant communities. We investigate how multiple environmental drivers affect community trait responses related to resource acquisition (plant height, specific leaf area (SLA), woodiness, and mycorrhizal status) and regeneration (seed mass, lateral spread) of European temperate deciduous forest understoreys. We sampled understorey communities and derived trait responses across spatial gradients of global-change drivers (temperature, precipitation, nitrogen deposition, and past land use), while integrating in-situ plot measurements on resources and conditions (soil type, Olsen phosphorus (P), Ellenberg soil moisture, light, litter mass, and litter quality). Among the global-change drivers, mean annual temperature strongly influenced traits related to resource acquisition. Higher temperatures were associated with taller understoreys producing leaves with lower SLA, and a higher proportional cover of woody and obligate mycorrhizal (OM) species. Communities in plots with higher Ellenberg soil moisture content had smaller seeds and lower proportional cover of woody and OM species. Finally, plots with thicker litter layers hosted taller understoreys with larger seeds and a higher proportional cover of OM species. Our findings suggest potential community shifts in temperate forest understoreys with global warming, and highlight the importance of local resources and conditions as well as global-change drivers for community trait variation.

Light and warming drive forest understorey community development in different environments

Plant community composition and functional traits respond to chronic drivers such as climate change and nitrogen (N) deposition. In contrast, pulse disturbances from ecosystem management can additionally change resources and conditions. Community responses to combined environmental changes may further depend on land-use legacies. Disentangling the relative importance of these global change drivers is necessary to improve predictions of future plant communities. We performed a multifactor global change experiment to disentangle drivers of herbaceous plant community trajectories in a temperate deciduous forest. Communities of five species, assembled from a pool of 15 forest herb species with varying ecological strategies, were grown in 384 mesocosms on soils from ancient forest (forested at least since 1850) and postagricultural forest (forested since 1950) collected across Europe. Mesocosms were exposed to two-level full-factorial treatments of warming, light addition (representing changing forest management) and N enrichment. We measured plant height, specific leaf area (SLA) and species cover over the course of three growing seasons. Increasing light availability followed by warming reordered the species towards a taller herb community, with limited effects of N enrichment or the forest land-use history. Two-way interactions between treatments and incorporating intraspecific trait variation (ITV) did not yield additional inference on community height change. Contrastingly, community SLA differed when considering ITV along with species reordering, which highlights ITV's importance for understanding leaf morphology responses to nutrient enrichment in dark conditions. Contrary to our expectations, we found limited evidence of land-use legacies affecting community responses to environmental changes, perhaps because dispersal limitation was removed in the experimental design. These findings can improve predictions of community functional trait responses to global changes by acknowledging ITV, and subtle changes in light availability. Adaptive forest management to impending global change could benefit the restoration and conservation of understorey plant communities by reducing the light availability.

The functional role of temperate forest understorey vegetation in a changing world

Temperate forests cover 16% of the global forest area. Within these forests, the understorey is an important biodiversity reservoir that can influence ecosystem processes and functions in multiple ways. However, we still lack a thorough understanding of the relative importance of the understorey for temperate forest functioning. As a result, understoreys are often ignored during assessments of forest functioning and changes thereof under global change. We here compiled studies that quantify the relative importance of the understorey for temperate forest functioning, focussing on litter production, nutrient cycling, evapotranspiration, tree regeneration, pollination and pathogen dynamics. We describe the mechanisms driving understorey functioning and develop a conceptual framework synthesizing possible effects of multiple global change drivers on understorey-mediated forest ecosystem functioning. Our review illustrates that the understorey's contribution to temperate forest functioning is significant but varies depending on the ecosystem function and the environmental context, and more importantly, the characteristics of the overstorey. To predict changes in understorey functioning and its relative importance for temperate forest functioning under global change, we argue that a simultaneous investigation of both overstorey and understorey functional responses to global change will be crucial. Our review shows that such studies are still very scarce, only available for a limited set of ecosystem functions and limited to quantification, providing little data to forecast functional responses to global change.

Potential vulnerability of 348 herbaceous species to atmospheric deposition of nitrogen and sulfur in the United States

Atmospheric nitrogen and sulfur pollution increased over much of the United States during the twentieth century from fossil fuel combustion and industrial agriculture. Despite recent declines, nitrogen and sulfur deposition continue to affect many plant communities in the United States, although which species are at risk remains uncertain. We used species composition data from >14,000 survey sites across the contiguous United States to evaluate the association between nitrogen and sulfur deposition and the probability of occurrence for 348 herbaceous species. We found that the probability of occurrence for 70% of species was negatively associated with nitrogen or sulfur deposition somewhere in the contiguous United States (56% for N, 51% for S). Of the species, 15% and 51% potentially decreased at all nitrogen and sulfur deposition rates, respectively, suggesting thresholds below the minimum deposition they receive. Although more species potentially increased than decreased with nitrogen deposition, increasers tended to be introduced and decreasers tended to be higher-value native species. More vulnerable species tended to be shorter with lower tissue nitrogen and magnesium. These relationships constitute predictive equations to estimate critical loads. These results demonstrate that many herbaceous species may be at risk from atmospheric deposition and can inform improvements to air quality policies in the United States and globally.