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Kim TY, Kim S, Jung JH, Woo MA. Paper-Based Radial Flow Assay Integrated to Portable Isothermal Amplification Chip Platform for Colorimetric Detection of Target DNA. BIOCHIP JOURNAL 2023; 17:1-11. [PMID: 37363267 PMCID: PMC10134700 DOI: 10.1007/s13206-023-00101-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 02/22/2023] [Accepted: 03/21/2023] [Indexed: 06/28/2023]
Abstract
A novel integrated detection system that introduces a paper-chip-based molecular detection strategy into a polydimethylsiloxane (PDMS) microchip and temperature control system was developed for on-site colorimetric detection of DNA. For the paper chip-based detection strategy, a padlock probe DNA (PLP)-mediated rolling circle amplification (RCA) reaction for signal amplification and a radial flow assay according to the Au-probe labeling strategy for visualization were optimized and applied for DNA detection. In the PDMS chip, the reactions for ligation of target-dependent PLP, RCA, and labeling were performed one-step under isothermal temperature in a single chamber, and one drop of the final reaction solution was loaded onto the paper chip to form a radial colorimetric signal. To create an optimal analysis environment, not only the optimization of molecular reactions for DNA detection but also the chamber shape of the PDMS chip and temperature control system were successfully verified. Our results indicate that a detection limit of 14.7 nM of DNA was achieved, and non-specific DNAs with a single-base mismatch at the target DNA were selectively discriminated. This integrated detection system can be applied not only for single nucleotide polymorphism identification, but also for pathogen gene detection. The adoption of inexpensive paper and PDMS chips allows the fabrication of cost-effective detection systems. Moreover, it is very suitable for operation in various resource-limited locations by adopting a highly portable and user-friendly detection method that minimizes the use of large and expensive equipment. Supplementary Information The online version contains supplementary material available at 10.1007/s13206-023-00101-7.
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Affiliation(s)
- Tai-Yong Kim
- Research Group of Food Safety and Distribution, Korea Food Research Institution, Wanju-Gun, Jeollabuk-do 55365 Republic of Korea
- Department of Food Science and Technology, Jeonbuk National University, Jeonju-si, Jeollabuk-do 54896 Republic of Korea
| | - Sanha Kim
- Department of Pharmaceutical Engineering, Dankook University, Cheonan-si, Chungcheongnam-do 31116 Republic of Korea
| | - Jae Hwan Jung
- Department of Pharmaceutical Engineering, Dankook University, Cheonan-si, Chungcheongnam-do 31116 Republic of Korea
| | - Min-Ah Woo
- Research Group of Food Safety and Distribution, Korea Food Research Institution, Wanju-Gun, Jeollabuk-do 55365 Republic of Korea
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Cheng Z, Wei J, Gu L, Zou L, Wang T, Chen L, Li Y, Yang Y, Li P. DNAzyme-based biosensors for mercury (Ⅱ) detection: Rational construction, advances and perspectives. JOURNAL OF HAZARDOUS MATERIALS 2022; 431:128606. [PMID: 35278952 DOI: 10.1016/j.jhazmat.2022.128606] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2021] [Revised: 02/17/2022] [Accepted: 02/27/2022] [Indexed: 06/14/2023]
Abstract
Mercury contamination is one of the most severe issues in society due to its threats to public health and the ecological system. However, traditional methods for mercury ion detection are still limited by their time-consuming procedures, requirement of expensive instruments, and low selectivity. In recent decades, tremendous progress has been made in the development of functional nucleic acid-based, especially DNAzyme sensors for mercury (Ⅱ) (Hg2+) determination, including RNA-cleaving DNAzymes and G-quadruplex-based DNAzymes in particular. Researchers have heavily studied the construction of Hg2+ sensors, mainly originating from in vitro selection-derived DNAzymes, by incorporating T-Hg2+-T recognition moieties in existing DNAzyme scaffolds, and interfacing Hg2+-sensitive sequences with nanomaterials. In the last case, the employment of materials (as quenchers, signal transducers and DNA immobilizers) enriches the application scenarios of current Hg2+-DNAzymes, due to a combination of their functions. We summarize a broad range of sensing approaches, including optical, electrochemical, and other sensing methods, and compare their features. This review elaborates on the rational design strategies for engineering DNAzymes to selectively sense Hg2+, critically discusses their properties in different application scenarios, and summarizes recent advances in this field. Additionally, current progress, challenges and future perspectives are also discussed. This minireview provides deeper insights into the chemistry of these functional nucleic acids when working with Hg2+, explains the design ideas of DNAzyme-sensors in each platform, and reveals potential opportunities in developing more advanced DNAzyme sensors for the highly selective and sensitive recognition of Hg2+. ENVIRONMENTAL IMPLICATION: Mercury is one of the most toxic metallic contaminants due to its high toxicity, non-biodegradability, and serious human health risks when accumulated in the body. In the recent decade, intensive studies have focused on exploring mercury sensors by combining DNAzymes with various sensing methods, paving a promising avenue to gain ultra-high sensitivity and selectivity. However, so far, no review has introduced the recent advances on DNAzyme-based sensors for mercury detection in a critical way. In this review, we comprehensively summarized the studies on DNAzyme-based sensors for mercury detection using various sensing techniques including optical, electrochemical and other sensing methods.
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Affiliation(s)
- Zehua Cheng
- State Key Laboratory of Quality Research in Chinese Medicine, Institute of Chinese Medical Sciences, University of Macau, Macau, China
| | - Jinchao Wei
- State Key Laboratory of Quality Research in Chinese Medicine, Institute of Chinese Medical Sciences, University of Macau, Macau, China
| | - Liqiang Gu
- State Key Laboratory of Quality Research in Chinese Medicine, Institute of Chinese Medical Sciences, University of Macau, Macau, China
| | - Liang Zou
- School of Medicine, Chengdu University, Chengdu 610106, China
| | - Ting Wang
- State Key Laboratory of Quality Research in Chinese Medicine, Institute of Chinese Medical Sciences, University of Macau, Macau, China
| | - Ling Chen
- State Key Laboratory of Quality Research in Chinese Medicine, Institute of Chinese Medical Sciences, University of Macau, Macau, China
| | - Yuqing Li
- Institute of Functional Nano and Soft Materials (FUNSOM), Jiangsu Key Laboratory for Carbon-Based Functional Materials and Devices, Soochow University, Suzhou, Jiangsu 215123, China; Institute of Molecular Medicine (IMM), Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200240, China.
| | - Yu Yang
- Institute of Molecular Medicine (IMM), Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Peng Li
- State Key Laboratory of Quality Research in Chinese Medicine, Institute of Chinese Medical Sciences, University of Macau, Macau, China.
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Rotake D, Pratim Goswami P, Govind Singh S. Ultraselective, ultrasensitive, point-of-care electrochemical sensor for detection of Hg(II) ions with electrospun-InZnO nanofibers. J Electroanal Chem (Lausanne) 2022. [DOI: 10.1016/j.jelechem.2022.116350] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Kim TY, Lim MC, Lim JW, Woo MA. Rolling Circle Amplification-based Copper Nanoparticle Synthesis on Cyclic Olefin Copolymer Substrate and Its Application in Aptasensor. BIOTECHNOL BIOPROC E 2022; 27:202-212. [PMID: 35474695 PMCID: PMC9026004 DOI: 10.1007/s12257-021-0220-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2021] [Revised: 09/16/2021] [Accepted: 09/19/2021] [Indexed: 11/28/2022]
Abstract
This study aimed to develop a label-free fluorescent aptasensor for the detection of diazinon (DZN) on a cyclic olefin copolymer (COC) substrate. The aptasensor design was based on rolling circle amplification (RCA) technology and the use of self-assembled copper nanoparticles (CuNPs). A dual-function (DF) probe, capable of binding to circular DNA and an aptamer, was designed and immobilized on a COC-bottom 96-well plate. An aptamer was used for selective recognition of DZN, and the specific site of the aptamer that strongly reacted with DZN was successfully identified using circular dichroism (CD) analysis. In presence of DZN, the aptamer and DZN formed a strong complex, thus providing an opportunity for hybridization of the DF probe and circular DNA, thereby initiating an RCA reaction. Repetitive poly thymine (T) sequence with a length of 30-mer, generated in the RCA reaction, served as a template for the synthesis of fluorescent copper nanoparticles, emitting an orange fluorescence signal (at approximately 620 nm) proportional to the amount of RCA product, within 10 min under UV irradiation. The CuNP fluorescence was imaged and quantified using an image analysis software. A linear correlation of the fluorescence signal was confirmed in the DZN concentration range of 0.1–3 ppm, with a detection limit of 0.15 ppm. Adoption of a label-free detection method, utilizing RCA and fluorescent CuNPs on COC substrates, reduced the need for complex equipment and requirements for DZN analysis, thereby representing a simple and rapid sensing method circumventing the limitations of current complex and labor-intensive methods.
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Affiliation(s)
- Tai-Yong Kim
- Research Group of Food Safety and Distribution, Korea Food Research Institute (KFRI), Wanju, Korea
- Department of Food Science and Technology, Jeonbuk National University, Jeonju, Korea
| | - Min-Cheol Lim
- Research Group of Food Safety and Distribution, Korea Food Research Institute (KFRI), Wanju, Korea
| | - Ji Won Lim
- The 4th R&D Institute, 6th Directorate, Agency for Defense Development, Daejeon, Korea
| | - Min-Ah Woo
- Research Group of Food Safety and Distribution, Korea Food Research Institute (KFRI), Wanju, Korea
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Cholesteric Liquid Crystal Photonic Hydrogel Films Immobilized with Urease Used for the Detection of Hg2+. CHEMOSENSORS 2022. [DOI: 10.3390/chemosensors10040140] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Mercury ion is one of the most widespread heavy metal contaminants which can accumulate in the body through multiple channels, posing a detrimental impact on human health. We demonstrate a simple and low-cost method for the detection of Hg2+ assisted by a cholesteric liquid crystal photonic hydrogel (polyacrylic acid (PAA)) film with immobilized urease (CLC-PAAurease film). In the absence of Hg2+, a significant change in color and an obvious red shift in the reflected light wavelength of the prepared film were observed, since urease can hydrolyze urea to produce NH3, resulting in an increasing pH value of the microenvironment of CLC-PAAurease film. Hg2+ can inhibit the activity of urease so that the color change of the film is not obvious, corresponding to a relatively small variation of the reflected light wavelength. Therefore, Hg2+ can be quantitatively detected by measuring the displacement of the reflected light wavelength of the film. The detection limit of Hg2+ is about 10 nM. This approach has a good application prospect in the monitoring of heavy metal ions in environmental water resources.
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A biosensor based on the biomimetic oxidase Fe 3O 4@MnO 2 for colorimetric determination of uric acid. Colloids Surf B Biointerfaces 2022; 212:112347. [PMID: 35085939 DOI: 10.1016/j.colsurfb.2022.112347] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Revised: 01/17/2022] [Accepted: 01/18/2022] [Indexed: 12/26/2022]
Abstract
High plasma urate is closely related to gout, cardiovascular and other diseases. Therefore, monitoring the content of uric acid (UA) in plasma is of great significance for the treatment of gout and the prevention of other related diseases. Herein, a biosensor based on the biomimetic oxidase Fe3O4 nanoparticles (NPs) @MnO2 nanosheets (Fe3O4@MnO2 NS) was constructed for colorimetric determination of UA. MnO2 NS is an efficient biomimetic oxidase, and we found that the intrinsic oxidase activity of MnO2 NS doped with Fe3O4 NPs can be significantly enhanced. The chromogenic substrate TMB can be catalyzed by Fe3O4 @MnO2 NS to generate blue oxidized TMB, and UA can decompose the MnO2 NS to inhibit the color reaction of TMB selectively, thereby realizing the quantitative detection of UA. In addition, the UA biosensor can perform colorimetric analysis of UA level through three methods: naked eye, smartphone and ultraviolet-visible (UV-vis) spectrophotometer. The linear ranges of UV-vis spectrophotometry and colorimetry with smartphone were 1-70 μM and 200-650 μM, respectively, and the limits of detection (LOD) were 0.27 μM and 21 μM. The analysis results of human plasma samples showed that the method had good selectivity and practicability.
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Zhang L, Shi S, Xiong P, Chen L, Xu J, Jiang J, Yang S, Wu H. DNAzyme recognition triggered cascade signal amplification for rapid and highly sensitive visual detection of uranyl ions. Analyst 2022; 147:4158-4166. [DOI: 10.1039/d2an01038k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A 40 min rapid and highly sensitive assay for visualized detection of UO22+ in water samples is reported. A dynamic range 1~50 nM and a LOD of 0.48 nM were obtained. Concentrations as low as 5 nM UO22+ could be distinguished by the naked eye.
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Affiliation(s)
- Ling Zhang
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621900, China
| | - Siwei Shi
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621900, China
| | - Penghui Xiong
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621900, China
| | - Lumin Chen
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621900, China
| | - Jie Xu
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621900, China
| | - Jiaolai Jiang
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621900, China
| | - Shanli Yang
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621900, China
| | - Haoxi Wu
- Institute of Materials, China Academy of Engineering Physics, Mianyang, 621900, China
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Bialy RM, Mainguy A, Li Y, Brennan JD. Functional nucleic acid biosensors utilizing rolling circle amplification. Chem Soc Rev 2022; 51:9009-9067. [DOI: 10.1039/d2cs00613h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Functional nucleic acids regulate rolling circle amplification to produce multiple detection outputs suitable for the development of point-of-care diagnostic devices.
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Affiliation(s)
- Roger M. Bialy
- Biointerfaces Institute, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4O3, Canada
| | - Alexa Mainguy
- Biointerfaces Institute, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4O3, Canada
| | - Yingfu Li
- Biointerfaces Institute, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4O3, Canada
- Department of Biochemistry and Biomedical Sciences, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4K1, Canada
| | - John D. Brennan
- Biointerfaces Institute, McMaster University, 1280 Main Street West, Hamilton, ON, L8S 4O3, Canada
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Li L, Zhao W, Zhang J, Luo L, Liu X, Li X, You T, Zhao C. Label-free Hg(II) electrochemiluminescence sensor based on silica nanoparticles doped with a self-enhanced Ru(bpy) 32+-carbon nitride quantum dot luminophore. J Colloid Interface Sci 2021; 608:1151-1161. [PMID: 34735851 DOI: 10.1016/j.jcis.2021.10.106] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2021] [Revised: 10/07/2021] [Accepted: 10/17/2021] [Indexed: 01/05/2023]
Abstract
Herein, a label-free, self-enhanced electrochemiluminescence (ECL) sensing strategy for divalent mercury (Hg(II)) detection was presented. First, a novel self-enhanced ECL luminophore was prepared by combining the ECL reagent tris(2, 2'-bipyridyl) dichlororuthenium(II) hexahydrate (Ru(bpy)32+) and its co-reactant carbon nitride quantum dots (CNQDs) via electrostatic interactions. In contrast to traditional ECL systems where the emitter and its co-reactant underwent an intermolecular reaction, the self-enhanced ECL system exhibited a shortened electron-transfer distance and enhanced luminous efficiency because the electrons transferred from CNQDs to oxidized Ru(bpy)32+ via an intramolecular pathway. Furthermore, the as-prepared self-enhanced ECL material was encapsulated in silica (SiO2) nanoparticles to generate a Ru-QDs@SiO2 luminophore. Based on the different affinity of Ru-QDs@SiO2 nanoparticles for single-stranded DNA (ssDNA) and Hg(II)-triggered double-stranded DNA (dsDNA), a label-free ECL biosensor for Hg(II) detection was developed as follows: in the absence of Hg(II), ssDNA was adsorbed on Ru-QDs@SiO2 surface via hydrogen bond, electrostatic, and hydrophobic interaction. Thus, quenched ECL signal was observed. On the contrary, in the presence of Hg(II), stable dsDNA was formed and carried the ssDNA separating from Ru-QDs@SiO2 surface, resulting in most of Ru-QDs@SiO2 existing in their free state. Therefore, a recovered ECL intensity was obtained. On this basis, Hg(II) was measured by the proposed method in the range of 0.1 nM-10 μM, with a detection limit of 33 pM. Finally, Hg(II) spiked in water samples was measured to evaluate the practicality of the fabricated biosensor.
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Affiliation(s)
- Libo Li
- Key Laboratory of Modern Agricultural Equipment and Technology, Ministry of Education, School of Agricultural Engineering, Jiangsu University, Zhenjiang, Jiangsu 212013, China
| | - Wanlin Zhao
- Key Laboratory of Modern Agricultural Equipment and Technology, Ministry of Education, School of Agricultural Engineering, Jiangsu University, Zhenjiang, Jiangsu 212013, China
| | - Jiayi Zhang
- Qingdao Hengxing University of Science and Technology, Qingdao, Shandong 266100, China
| | - Lijun Luo
- Key Laboratory of Modern Agricultural Equipment and Technology, Ministry of Education, School of Agricultural Engineering, Jiangsu University, Zhenjiang, Jiangsu 212013, China
| | - Xiaohong Liu
- Key Laboratory of Modern Agricultural Equipment and Technology, Ministry of Education, School of Agricultural Engineering, Jiangsu University, Zhenjiang, Jiangsu 212013, China
| | - Xia Li
- Department of Chemistry, Liaocheng University, Liaocheng, Shandong 252059, China
| | - Tianyan You
- Key Laboratory of Modern Agricultural Equipment and Technology, Ministry of Education, School of Agricultural Engineering, Jiangsu University, Zhenjiang, Jiangsu 212013, China.
| | - Chunjiang Zhao
- National Engineering Research Center for Information Technology in Agriculture (NERCITA), Beijing 100097, China.
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Ko E, Hur W, Son SE, Seong GH, Han DK. Au nanoparticle-hydrogel nanozyme-based colorimetric detection for on-site monitoring of mercury in river water. Mikrochim Acta 2021; 188:382. [PMID: 34657212 DOI: 10.1007/s00604-021-05032-4] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2021] [Accepted: 09/17/2021] [Indexed: 11/25/2022]
Abstract
A sensitive on-site mercury sensing platform was developed for simple and effective monitoring of mercury levels in the field. The simple and practical mercury detection system was designed by integrating an Au nanoparticle-PEG hydrogel block nanozyme (Au-HBNz) into a polymer film-based colorimetric device. Upon addition of Hg2+ ions, Au-HBNz exhibited excellent peroxidase-like activity, catalyzing the oxidation of 3,3',5,5'-tetramethylbenzidine into a blue-colored product, which has a maximum absorbance at 652 nm. The resulting color intensity change was evaluated using a smartphone for simple and rapid Hg2+ detection with a broad detection range (0.008-20 μg∙mL-1) and a linear concentration-response relationship (R2 = 0.96). The detection limit (1.10 ng∙mL-1) was lower than the maximum permissible Hg2+ levels in drinking water set by the World Health Organization (6 ng∙mL-1) and U.S. Environmental Protection Agency (2 ng∙mL-1). The recoveries of Hg2+ determination in river water by spiking Hg2+ samples ranged from 92 to 106%, which indicated high validity and applicability of the Hg2+ detection system for field measurements. Thus, the developed sensor enables highly selective and efficient real-time monitoring of Hg2+.
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Affiliation(s)
- Euna Ko
- Division of Materials Analysis Research, Korea Basic Science Institute, 169-148, Gwahak-ro, Yuseong-Gu, Daejeon, 34133, Republic of Korea
| | - Won Hur
- Department of Bionano Engineering, Hanyang University, 55 Hanyangdaehak-ro, Sangnok-gu, Ansan, Gyeonggi-do, 15588, Republic of Korea
| | - Seong Eun Son
- Department of Bionano Engineering, Hanyang University, 55 Hanyangdaehak-ro, Sangnok-gu, Ansan, Gyeonggi-do, 15588, Republic of Korea
| | - Gi Hun Seong
- Department of Bionano Engineering, Hanyang University, 55 Hanyangdaehak-ro, Sangnok-gu, Ansan, Gyeonggi-do, 15588, Republic of Korea
| | - Do Kyoung Han
- Division of Materials Analysis Research, Korea Basic Science Institute, 169-148, Gwahak-ro, Yuseong-Gu, Daejeon, 34133, Republic of Korea.
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Rolling Circle Amplification as an Efficient Analytical Tool for Rapid Detection of Contaminants in Aqueous Environments. BIOSENSORS-BASEL 2021; 11:bios11100352. [PMID: 34677308 PMCID: PMC8533700 DOI: 10.3390/bios11100352] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/12/2021] [Revised: 09/16/2021] [Accepted: 09/21/2021] [Indexed: 12/16/2022]
Abstract
Environmental contaminants are a global concern, and an effective strategy for remediation is to develop a rapid, on-site, and affordable monitoring method. However, this remains challenging, especially with regard to the detection of various contaminants in complex water environments. The application of molecular methods has recently attracted increasing attention; for example, rolling circle amplification (RCA) is an isothermal enzymatic process in which a short nucleic acid primer is amplified to form a long single-stranded nucleic acid using a circular template and special nucleic acid polymerases. Furthermore, this approach can be further engineered into a device for point-of-need monitoring of environmental pollutants. In this paper, we describe the fundamental principles of RCA and the advantages and disadvantages of RCA assays. Then, we discuss the recently developed RCA-based tools for environmental analysis to determine various targets, including heavy metals, organic small molecules, nucleic acids, peptides, proteins, and even microorganisms in aqueous environments. Finally, we summarize the challenges and outline strategies for the advancement of this technique for application in contaminant monitoring.
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Abstract
This article provides a comprehensive review of biosensing with DNAzymes, providing an overview of different sensing applications while highlighting major progress and seminal contributions to the field of portable biosensor devices and point-of-care diagnostics. Specifically, the field of functional nucleic acids is introduced, with a specific focus on DNAzymes. The incorporation of DNAzymes into bioassays is then described, followed by a detailed overview of recent advances in the development of in vivo sensing platforms and portable sensors incorporating DNAzymes for molecular recognition. Finally, a critical perspective on the field, and a summary of where DNAzyme-based devices may make the biggest impact are provided.
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Affiliation(s)
- Erin M McConnell
- Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Ontario L8S 4K1, Canada.
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Trends in sensor development toward next-generation point-of-care testing for mercury. Biosens Bioelectron 2021; 183:113228. [PMID: 33862396 DOI: 10.1016/j.bios.2021.113228] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Revised: 04/02/2021] [Accepted: 04/03/2021] [Indexed: 01/01/2023]
Abstract
Mercury is one of the most common heavy metals and a major environmental pollutant that affects ecosystems. Since mercury and its compounds are toxic to humans, even at low concentrations, it is very important to monitor mercury contamination in water and foods. Although conventional mercury detection methods, including inductively coupled plasma mass spectrometry, atomic absorption spectroscopy, and gas chromatography-mass spectrometry, exhibit excellent sensitivity and accuracy, they require operation by an expert in a sophisticated and fully controlled laboratory environment. To overcome these limitations and realize point-of-care testing, many novel methods for direct sample analysis in the field have recently been developed by improving the speed and simplicity of detection. Commonly, these unconventional sensors rely on colorimetric, fluorescence, or electrochemical mechanisms to transduce signals from mercury. In the case of colorimetric and fluorescent sensors, benchtop methods have gradually evolved through technology convergence to give standalone platforms, such as paper-based assays and lab-on-a-chip systems, and portable measurement devices, such as smartphones. Electrochemical sensors that use screen-printed electrodes with carbon or metal nanomaterials or hybrid materials to improve sensitivity and stability also provide promising detection platforms. This review summarizes the current state of sensor platforms for the on-field detection of mercury with a focus on key features and recent developments. Furthermore, trends for next-generation mercury sensors are suggested based on a paradigm shift to the active integration of cutting-edge technologies, such as drones, systems based on artificial intelligence, machine learning, and three-dimensional printing, and high-quality smartphones.
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Analytical methods for mercury speciation, detection, and measurement in water, oil, and gas. Trends Analyt Chem 2020. [DOI: 10.1016/j.trac.2020.116016] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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16
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Cross-priming isothermal amplification combined with nucleic acid test strips for detection of meat species. Anal Biochem 2020; 597:113672. [DOI: 10.1016/j.ab.2020.113672] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2019] [Revised: 02/27/2020] [Accepted: 02/28/2020] [Indexed: 12/17/2022]
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Lim JW, Kim TY, Lim MC, Choi SW, Woo MA. Portable Pumpless 3D-Printed Chip for On-Site Colorimetric Screening of Hg2+ in Lake Water. BIOCHIP JOURNAL 2020. [DOI: 10.1007/s13206-019-4205-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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18
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Wang Q, Peng R, Wang Y, Zhu S, Yan X, Lei Y, Sun Y, He H, Luo L. Sequential colorimetric sensing of cupric and mercuric ions by regulating the etching process of triangular gold nanoplates. Mikrochim Acta 2020; 187:205. [PMID: 32152683 DOI: 10.1007/s00604-020-4176-0] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2019] [Accepted: 02/18/2020] [Indexed: 01/22/2023]
Abstract
A triangular gold nanoplate (AuNPL)-based colorimetric assay is presented for ultrasensitive determination of cupric ions (Cu2+) and mercuric ions (Hg2+) in sequence. AuNPLs were found to be etched efficiently when producing triiodide ions (I3-) by a redox reaction between Cu2+ and iodide ions (I-), leading to a change of the shape of AuNPLs from triangular to sphere along with a color change from blue to pink. In the presence of Hg2+ the etching of AuNPLs was suppressed due to the consumption of I- by the formation of HgI2. With an increase of the concentration of the Hg2+ a transformation from sphere to triangular in the shape of AuNPLs occurred with a color change from pink to blue. The evolution of AuNPLs from etching to anti-etching state by sequential addition of Cu2+ and Hg2+ was accompanied with color variations and band shifts of localized surface plasmon resonance (LSPR), allowing for visual and spectroscopic determination of Cu2+ and Hg2+ successively within 15 min. In the range 0.01-1.5 μM for Cu2+ and 0.02-3.0 μM for Hg2+, the linear relationship between the band shift values and the target ions concentration was found good (R2 > 0.996). The limit of detections (3S/k) was 19 nM for Cu2+ and 9 nM for Hg2+, respectively. The lowest visual estimation concentration was 80 nM for both Cu2+ and Hg2+ through the distinguishable color changes. This system exhibited desirable selectivity for Cu2+ and Hg2+ over other common ions tested. The method has been successfully applied to sequential determination of Cu2+ and Hg2+ in real water and food samples. Graphical abstract Scheme 1 Schematic illustration for sequential detection of Cu2+ and Hg2+ based on etching of AuNPLs.
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Affiliation(s)
- Qian Wang
- Department of Chemistry, College of Sciences, Shanghai University, 99 Shangda Road, Shanghai, 200444, People's Republic of China
| | - Ruifeng Peng
- Department of Chemistry, College of Sciences, Shanghai University, 99 Shangda Road, Shanghai, 200444, People's Republic of China
| | - Yishan Wang
- Department of Chemistry, College of Sciences, Shanghai University, 99 Shangda Road, Shanghai, 200444, People's Republic of China
| | - Shouzhe Zhu
- Department of Chemistry, College of Sciences, Shanghai University, 99 Shangda Road, Shanghai, 200444, People's Republic of China
| | - Xiaoxia Yan
- Department of Chemistry, College of Sciences, Shanghai University, 99 Shangda Road, Shanghai, 200444, People's Republic of China
| | - Yunyi Lei
- Department of Chemistry, College of Sciences, Shanghai University, 99 Shangda Road, Shanghai, 200444, People's Republic of China
| | - Youbao Sun
- Shimadzu (China) Co., Ltd., Shanghai, 200052, People's Republic of China
| | - Haibo He
- Department of Chemistry, College of Sciences, Shanghai University, 99 Shangda Road, Shanghai, 200444, People's Republic of China.
| | - Liqiang Luo
- Department of Chemistry, College of Sciences, Shanghai University, 99 Shangda Road, Shanghai, 200444, People's Republic of China.
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