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Manqele A, Adesiyun A, Mafuna T, Pierneef R, Moerane R, Gcebe N. Virulence Potential and Antimicrobial Resistance of Listeria monocytogenes Isolates Obtained from Beef and Beef-Based Products Deciphered Using Whole-Genome Sequencing. Microorganisms 2024; 12:1166. [PMID: 38930548 PMCID: PMC11205329 DOI: 10.3390/microorganisms12061166] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2024] [Revised: 05/26/2024] [Accepted: 05/27/2024] [Indexed: 06/28/2024] Open
Abstract
Listeria monocytogenes is a ubiquitous bacterial pathogen that threatens the food chain and human health. In this study, whole-genome sequencing (WGS) was used for the genomic characterization of L. monocytogenes (n = 24) from beef and beef-based products. Multilocus Sequence Type (MLST) analysis revealed that ST204 of CC204 was the most common sequence type (ST). Other sequence types detected included ST1 and ST876 of CC1, ST5 of CC5, ST9 of CC9, ST88 of CC88, ST2 and ST1430 of CC2, and ST321 of CC321. Genes encoding for virulence factors included complete LIPI-1 (pfrA-hly-plcA-plcB-mpl-actA) from 54% (13/24) of the isolates of ST204, ST321, ST1430, and ST9 and internalin genes inlABC that were present in all the STs. All the L. monocytogenes STs carried four intrinsic/natural resistance genes, fosX, lin, norB, and mprF, conferring resistance to fosfomycin, lincosamide, quinolones, and cationic peptides, respectively. Plasmids pLGUG1 and J1776 were the most detected (54% each), followed by pLI100 (13%) and pLM5578 (7%). The prophage profile, vB_LmoS_188, was overrepresented amongst the isolates, followed by LP_101, LmoS_293_028989, LP_030_2_021539, A006, and LP_HM00113468. Listeria genomic island 2 (LGI-2) was found to be present in all the isolates, while Listeria genomic island 3 (LGI-3) was present in a subset of isolates (25%). The type VII secretion system was found in 42% of the isolates, and sortase A was present in all L. monocytogenes genomes. Mobile genetic elements and genomic islands did not harbor any virulence, resistance, or environmental adaptation genes that may benefit L. monocytogenes. All the STs did not carry genes that confer resistance to first-line antibiotics used for the treatment of listeriosis. The characterization of L. monocytogenes in our study highlighted the environmental resistance and virulence potential of L. monocytogenes and the risk posed to the public, as this bacterium is frequently found in food and food processing environments.
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Affiliation(s)
- Ayanda Manqele
- Department of Production Animal Studies, Faculty of Veterinary Science, University of Pretoria, Pretoria 0110, South Africa
- Agricultural Research Council-Onderstepoort Veterinary Research, Pretoria 0110, South Africa
| | - Abiodun Adesiyun
- Department of Production Animal Studies, Faculty of Veterinary Science, University of Pretoria, Pretoria 0110, South Africa
- Department of Basic Veterinary Sciences, University of the West Indies, St. Augustine 999183, Trinidad and Tobago
| | - Thendo Mafuna
- Department of Biochemistry, University of Johannesburg, Johannesburg 20062028, South Africa
| | - Rian Pierneef
- Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria 0001, South Africa
- Centre for Bioinformatics and Computational Biology, University of Pretoria, Pretoria 0001, South Africa
- SARChI Chair: Marine Microbiomics, microbiome@UP, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria 0001, South Africa
| | - Rebone Moerane
- Department of Production Animal Studies, Faculty of Veterinary Science, University of Pretoria, Pretoria 0110, South Africa
| | - Nomakorinte Gcebe
- Department of Production Animal Studies, Faculty of Veterinary Science, University of Pretoria, Pretoria 0110, South Africa
- Agricultural Research Council-Onderstepoort Veterinary Research, Pretoria 0110, South Africa
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Gana J, Gcebe N, Pierneef RE, Chen Y, Moerane R, Adesiyun AA. Whole Genome Sequence Analysis of Listeria monocytogenes Isolates Obtained from the Beef Production Chain in Gauteng Province, South Africa. Microorganisms 2024; 12:1003. [PMID: 38792832 PMCID: PMC11123765 DOI: 10.3390/microorganisms12051003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2024] [Revised: 05/10/2024] [Accepted: 05/14/2024] [Indexed: 05/26/2024] Open
Abstract
The study used whole-genome sequencing (WGS) and bioinformatics analysis for the genomic characterization of 60 isolates of Listeria monocytogenes obtained from the beef production chain (cattle farms, abattoirs, and retail outlets) in Gauteng province, South Africa. The sequence types (STs), clonal complexes (CCs), and the lineages of the isolates were determined using in silico multilocus sequence typing (MLST). We used BLAST-based analyses to identify virulence and antimicrobial genes, plasmids, proviruses/prophages, and the CRISPR-Cas system. The study investigated any association of the detected genes to the origin in the beef production chain of the L. monocytogenes isolates. Overall, in 60 isolates of Listeria monocytogenes, there were seven STs, six CCs, forty-four putative virulence factors, two resistance genes, one plasmid with AMR genes, and three with conjugative genes, one CRISPR gene, and all 60 isolates were positive for proviruses/prophages. Among the seven STs detected, ST204 (46.7%) and ST2 (21.7%) were the most prominent, with ST frequency varying significantly (p < 0.001). The predominant CC detected were CC2 (21.7%) and CC204 (46.7%) in lineages I and II, respectively. Of the 44 virulence factors detected, 26 (across Listeria Pathogenicity Islands, LIPIs) were present in all the isolates. The difference in the detection frequency varied significantly (p < 0.001). The two AMR genes (fosX and vga(G)) detected were present in all 60 (100%) isolates of L. monocytogenes. The only plasmid, NF033156, was present in three (5%) isolates. A CRISPR-Cas system was detected in six (10%), and all the isolates carried proviruses/prophages. The source and sample type significantly affected the frequencies of STs and virulence factors in the isolates of L. monocytogenes. The presence of fosX and vga(G) genes in all L. monocytogenes isolates obtained from the three industries of the beef production chain can potentially cause therapeutic implications. Our study, which characterized L. monocytogenes recovered from the three levels in the beef production chain, is the first time genomics was performed on this type of data set in the country, and this provides insights into the health implications of Listeria.
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Affiliation(s)
- James Gana
- Department of Production Animal Studies, Faculty of Veterinary Science, University of Pretoria, Private Bag X04, Onderstepoort, Pretoria 0110, South Africa; (J.G.); (R.M.)
- Department of Agricultural Education, Federal College of Education, Kontagora 923101, Niger State, Nigeria
| | - Nomakorinte Gcebe
- Bacteriology Department, Onderstepoort Veterinary Research, Agricultural Research Council, Pretoria 0110, South Africa;
| | - Rian Edward Pierneef
- Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria 0001, South Africa;
- Centre for Bioinformatics and Computational Biology, University of Pretoria, Pretoria 0001, South Africa
- Microbiome@UP, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria 0001, South Africa
| | - Yi Chen
- Center for Food Safety and Applied Nutrition, US Food and Drug Administration, 5001 Campus Dr. Room 4E-007/Mailstop HFS-710, College Park, MD 20740, USA;
| | - Rebone Moerane
- Department of Production Animal Studies, Faculty of Veterinary Science, University of Pretoria, Private Bag X04, Onderstepoort, Pretoria 0110, South Africa; (J.G.); (R.M.)
| | - Abiodun Adewale Adesiyun
- Department of Production Animal Studies, Faculty of Veterinary Science, University of Pretoria, Private Bag X04, Onderstepoort, Pretoria 0110, South Africa; (J.G.); (R.M.)
- School of Veterinary Medicine, Faculty of Medical Sciences, University of the West Indies, St. Augustine 685509, Trinidad and Tobago
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Koutsoumanis K, Allende A, Bolton D, Bover‐Cid S, Chemaly M, De Cesare A, Herman L, Hilbert F, Lindqvist R, Nauta M, Nonno R, Peixe L, Ru G, Simmons M, Skandamis P, Suffredini E, Fox E, Gosling R(B, Gil BM, Møretrø T, Stessl B, da Silva Felício MT, Messens W, Simon AC, Alvarez‐Ordóñez A. Persistence of microbiological hazards in food and feed production and processing environments. EFSA J 2024; 22:e8521. [PMID: 38250499 PMCID: PMC10797485 DOI: 10.2903/j.efsa.2024.8521] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2024] Open
Abstract
Listeria monocytogenes (in the meat, fish and seafood, dairy and fruit and vegetable sectors), Salmonella enterica (in the feed, meat, egg and low moisture food sectors) and Cronobacter sakazakii (in the low moisture food sector) were identified as the bacterial food safety hazards most relevant to public health that are associated with persistence in the food and feed processing environment (FFPE). There is a wide range of subtypes of these hazards involved in persistence in the FFPE. While some specific subtypes are more commonly reported as persistent, it is currently not possible to identify universal markers (i.e. genetic determinants) for this trait. Common risk factors for persistence in the FFPE are inadequate zoning and hygiene barriers; lack of hygienic design of equipment and machines; and inadequate cleaning and disinfection. A well-designed environmental sampling and testing programme is the most effective strategy to identify contamination sources and detect potentially persistent hazards. The establishment of hygienic barriers and measures within the food safety management system, during implementation of hazard analysis and critical control points, is key to prevent and/or control bacterial persistence in the FFPE. Once persistence is suspected in a plant, a 'seek-and-destroy' approach is frequently recommended, including intensified monitoring, the introduction of control measures and the continuation of the intensified monitoring. Successful actions triggered by persistence of L. monocytogenes are described, as well as interventions with direct bactericidal activity. These interventions could be efficient if properly validated, correctly applied and verified under industrial conditions. Perspectives are provided for performing a risk assessment for relevant combinations of hazard and food sector to assess the relative public health risk that can be associated with persistence, based on bottom-up and top-down approaches. Knowledge gaps related to bacterial food safety hazards associated with persistence in the FFPE and priorities for future research are provided.
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Belias A, Sullivan G, Wiedmann M, Ivanek R. Factors that contribute to persistent Listeria in food processing facilities and relevant interventions: A rapid review. Food Control 2022. [DOI: 10.1016/j.foodcont.2021.108579] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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Bouymajane A, Rhazi Filali F, Oulghazi S, Lafkih N, Ed-Dra A, Aboulkacem A, El Allaoui A, Ouhmidou B, Moumni M. Occurrence, antimicrobial resistance, serotyping and virulence genes of Listeria monocytogenes isolated from foods. Heliyon 2021; 7:e06169. [PMID: 33644461 PMCID: PMC7889945 DOI: 10.1016/j.heliyon.2021.e06169] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2020] [Revised: 06/06/2020] [Accepted: 01/28/2021] [Indexed: 11/23/2022] Open
Abstract
Listeria monocytogenes is a pathogen contaminated food, it is the cause of listeriosis worldwide. The aims of this study were to investigate the occurrence, antimicrobial resistance, serotyping and virulence genes of L. monocytogenes isolated from foods in Meknes city of Morocco. From June 2017 to May 2018, 520 food samples were randomly collected from a traditional market and two overcrowded popular neighborhoods (Lahdim and Hamria) and subjected to the detection of L. monocytogenes. Then, the antimicrobial susceptibility of the isolated strains were evaluated using the standard disk diffusion method and the determination of serotypes and virulence genes was performed by PCR. The results showed the detection of L. monocytogenes in fifteen (2.9%) of 520 samples, including three (5.7%) isolates in traditional whey, raw minced meat and raw sausage, two (3.8%) in raw milk and one (1.9%) in smen (traditional butter), raw bovine meat, raw poultry meat and raw fish, while salads and rayeb (traditional coagulated milk) were not contaminated. Among the fifteen isolated L. monocytogenes, nine (60%) belonged to the serogroup (1/2a, 1/2c, 3a and 3c), two (13.3%) belonged to the serogroup (1/2b, 3b, 4b and 4d) and four (26.6%) do not belong to any studied serogroup. Furthermore, fifteen (100%) isolates showed the presence of actA gene, fourteen (93.3%) harbored hlyA, prfA and plcB genes, thirteen (86.7%) carried inlA and inlC genes and twelve (80%) showed inlJ gene. The antimicrobial susceptibility analysis showed that the isolated strains were more resistant to amoxicillin/clavulanic acid (67.0%), erythromycin (60.0%), sulphamethoxazole (40.0%), ampicillin and sulphamethoxazole/trimethoprim (33.0%) and tetracycline (20.0%). Furthermore, 66.7% (10/15) were multidrug-resistant. From this study, we can conclude that foods marketed in Meknes city were contaminated by multidrug-resistant strains of L. monocytogenes harboring virulence genes, which may cause a serious risk to public health.
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Affiliation(s)
- Aziz Bouymajane
- Team of Microbiology and Health, Laboratory of Chemistry-Biology Applied to the Environment, Moulay Ismail University Faculty of Sciences, BP 11201 Zitoune Meknes, Morocco
| | - Fouzia Rhazi Filali
- Team of Microbiology and Health, Laboratory of Chemistry-Biology Applied to the Environment, Moulay Ismail University Faculty of Sciences, BP 11201 Zitoune Meknes, Morocco
| | - Said Oulghazi
- Cellular Genomics and Molecular Techniques of Investigations, Moulay Ismail University Faculty of Sciences, BP 11201 Zitoune Meknes, Morocco
| | - Nada Lafkih
- Cellular Genomics and Molecular Techniques of Investigations, Moulay Ismail University Faculty of Sciences, BP 11201 Zitoune Meknes, Morocco
| | - Abdelaziz Ed-Dra
- Team of Microbiology and Health, Laboratory of Chemistry-Biology Applied to the Environment, Moulay Ismail University Faculty of Sciences, BP 11201 Zitoune Meknes, Morocco
| | - Amal Aboulkacem
- Regional Laboratory of Epidemiological Diagnosis and Environmental Hygiene, Fez-Meknes, Morocco
| | - Abdallah El Allaoui
- Team of Microbiology and Health, Laboratory of Chemistry-Biology Applied to the Environment, Moulay Ismail University Faculty of Sciences, BP 11201 Zitoune Meknes, Morocco
| | - Bouchra Ouhmidou
- Laboratory of Bioactive Molecules, Structures and Functions, Faculty of Sciences and Technologies, Sidi Mohamed Ben Abdallah University, Fes, Morocco
| | - Mohieddine Moumni
- Cellular Genomics and Molecular Techniques of Investigations, Moulay Ismail University Faculty of Sciences, BP 11201 Zitoune Meknes, Morocco
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Alvarez-Molina A, Cobo-Díaz JF, López M, Prieto M, de Toro M, Alvarez-Ordóñez A. Unraveling the emergence and population diversity of Listeria monocytogenes in a newly built meat facility through whole genome sequencing. Int J Food Microbiol 2021; 340:109043. [PMID: 33454520 DOI: 10.1016/j.ijfoodmicro.2021.109043] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2020] [Revised: 12/21/2020] [Accepted: 12/22/2020] [Indexed: 12/15/2022]
Abstract
The food processing environments of a newly opened meat processing facility were sampled in ten visits carried out during its first 1.5 years of activity and analyzed for the presence of Listeria monocytogenes. A total of 18 L. monocytogenes isolates were obtained from 229 samples, and their genomes were sequenced to perform comparative genomic analyses. An increase in the frequency of isolation of L. monocytogenes and in the diversity of sequence types (STs) detected was observed along time. Although the strains isolated belonged to six different STs (ST8, ST9, ST14, ST37, ST121 and ST155), ST9 was the most abundant (8 out of 18 strains). Low (0 and 2) single nucleotide polymorphism (SNP) distances were found between two pairs of ST9 strains isolated in both cases 3 months apart from the same processing room (Lm-1267 and Lm-1705, with a 2 SNPs distance in the core genome; Lm-1265 and Lm-1706, with a 0 SNPs distance), which suggests that these strains may be persistent L. monocytogenes strains in the food processing environment. Most strains showed an in silico attenuated virulence potential either through the truncation of InlA (in 67% of the isolates) or the absence of other virulence factors involved in cell adhesion or invasion. Twelve of the eighteen L. monocytogenes isolates contained a plasmid, which ranged in size from 4 to 87 Kb and harbored stress survival, in addition to heavy metals and biocides resistance determinants. Identical or highly similar plasmids were identified for various sets of L. monocytogenes ST9 isolates, which suggests the clonal expansion and persistence of plasmid-containing ST9 strains in the processing environments of the meat facility. Finally, the analysis of the L. monocytogenes genomes available in the NCBI database, and their associated metadata, evidenced that strains from ST9 are more frequently reported in Europe, linked to foods, particularly to meat and pork products, and less represented among clinical isolates than other L. monocytogenes STs. It also showed that the ST9 strains here isolated were more closely related to the European isolates, which clustered together and separated from ST9 North American isolates.
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Affiliation(s)
| | - José F Cobo-Díaz
- Department of Food Hygiene and Technology, Universidad de León, León, Spain
| | - Mercedes López
- Department of Food Hygiene and Technology, Universidad de León, León, Spain; Institute of Food Science and Technology, Universidad de León, León, Spain
| | - Miguel Prieto
- Department of Food Hygiene and Technology, Universidad de León, León, Spain; Institute of Food Science and Technology, Universidad de León, León, Spain
| | - María de Toro
- Genomics and Bioinformatics Core Facility, Biomedical Research Center of La Rioja (CIBIR), Logroño, Spain
| | - Avelino Alvarez-Ordóñez
- Department of Food Hygiene and Technology, Universidad de León, León, Spain; Institute of Food Science and Technology, Universidad de León, León, Spain.
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Pennone V, Dygico KL, Coffey A, Gahan CG, Grogan H, McAuliffe O, Burgess CM, Jordan K. Effectiveness of current hygiene practices on minimization of Listeria monocytogenes in different mushroom production-related environments. Food Sci Nutr 2020; 8:3456-3468. [PMID: 32724609 PMCID: PMC7382171 DOI: 10.1002/fsn3.1629] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2020] [Revised: 04/10/2020] [Accepted: 04/12/2020] [Indexed: 11/05/2022] Open
Abstract
BACKGROUND The commercial production of Agaricus bisporus is a three stage process: 1) production of compost, also called "substrate"; 2) production of casing soil; and 3) production of the mushrooms. Hygiene practices are undertaken at each stage: pasteurization of the substrate, hygiene practices applied during the production of casing soil, postharvest steam cookout, and disinfection at the mushroom production facilities. However, despite these measures, foodborne pathogens, including Listeria monocytogenes, are reported in the mushroom production environment. In this work, the presence of L. monocytogenes was evaluated before and after the application of hygiene practices at each stage of mushroom production with swabs, samples of substrate, casing, and spent mushroom growing substrates. RESULTS L. monocytogenes was not detected in any casing or substrate sample by enumeration according to BS EN ISO 11290-2:1998. Analysis of the substrate showed that L. monocytogenes was absent in 10 Phase II samples following pasteurization, but was then present in 40% of 10 Phase III samples. At the casing production facility, 31% of 59 samples were positive. Hygiene improvements were applied, and after four sampling occasions, 22% of 37 samples were positive, but no statistically significant difference was observed (p > .05). At mushroom production facilities, the steam cookout process inactivated L. monocytogenes in the spent growth substrate, but 13% of 15 floor swabs at Company 1 and 19% of 16 floor swabs at Company 2, taken after disinfection, were positive. CONCLUSION These results showed the possibility of L. monocytogenes recontamination of Phase III substrate, cross-contamination at the casing production stage and possible survival after postharvest hygiene practices at the mushroom growing facilities. This information will support the development of targeted measures to minimize L. monocytogenes in the mushroom industry.
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Affiliation(s)
- Vincenzo Pennone
- Teagasc research centreMooreparkIreland
- Cork Institute of TechnologyBishopstownIreland
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Mortazavi N, Aliakbarlu J. Antibacterial Effects of Ultrasound, Cinnamon Essential Oil, and Their Combination Against Listeria monocytogenes and Salmonella Typhimurium in Milk. J Food Sci 2019; 84:3700-3706. [PMID: 31721204 DOI: 10.1111/1750-3841.14914] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2019] [Revised: 09/29/2019] [Accepted: 10/05/2019] [Indexed: 01/06/2023]
Abstract
The antibacterial effects of ultrasound (US) and cinnamon essential oil (CEO), individually and combined, were investigated against Listeria monocytogenes and Salmonella Typhimurium in low- and high-fat milk during 6-day storage. At the end of storage, CEO alone decreased 2 and 2.2 log cycles of Salmonella Typhimurium and 2.5 and 3 log cycles of L. monocytogenes populations in low- and high-fat milk, respectively. US alone reduced 1.6 log cycle of Salmonella Typhimurium and 0.7 log cycle of L. monocytogenes in both milk type. The combined treatment could reduce 2.7 log cycle of Salmonella Typhimurium in low-fat milk and 3.8 log cycle in high-fat milk. The combined treatment also achieved 4.3 and 4.5 log cycle reductions of L. monocytogenes in low- and high-fat milk, respectively. The results of this study showed that the combination of CEO and US could be used as an effective antibacterial treatment in milk. PRACTICAL APPLICATIONS: Due to adverse effects of thermal processing on the sensory and nutritional properties of food and the potentially harmful effects of chemical preservatives, nonthermal preservation methods and natural antimicrobials have been gained much attention. In this study, the antibacterial effects of ultrasound (US) and cinnamon essential oil (CEO), individually and combined, were investigated against Listeria monocytogenes and Salmonella Typhimurium in low- and high-fat milk. The results indicated that combination of US and CEO could significantly decrease L. monocytogenes and Salmonella Typhimurium populations in milk. Then, this combined treatment may be used as an effective alternative method to microbial inactivation in milk.
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Affiliation(s)
- Negar Mortazavi
- Dept. of Food Hygiene and Quality Control, Faculty of Veterinary Medicine, Urmia Univ., Urmia, Iran
| | - Javad Aliakbarlu
- Dept. of Food Hygiene and Quality Control, Faculty of Veterinary Medicine, Urmia Univ., Urmia, Iran
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Maia DSV, Haubert L, Würfel SDFR, Kroning IS, Cardoso MRDI, Lopes GV, Fiorentini ÂM, da Silva WP. Listeria monocytogenes in sliced cheese and ham from retail markets in southern Brazil. FEMS Microbiol Lett 2019; 366:5675628. [PMID: 31834356 DOI: 10.1093/femsle/fnz249] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2019] [Accepted: 12/11/2019] [Indexed: 01/11/2023] Open
Abstract
The aims of this study were to evaluate the occurrence of Listeria monocytogenes and Salmonella spp. in sliced cheese and ham from retail markets in southern Brazil, as well as to perform molecular characterization and to assess the antimicrobial resistance profile of the isolates. Samples (n = 160) of sliced cheese and ham were collected at retail level from the city of Pelotas, Brazil. The isolation of L. monocytogenes and Salmonella spp. was performed and the isolates were confirmed by PCR, submitted to antimicrobial susceptibility testing and pulsed-field gel electrophoresis (PFGE). Listeria monocytogenes was found in 9.4% (15/160) of the samples. All L. monocytogenes isolates were positive for the prs, inlA, inlC and inlJ genes. Salmonella spp. was not isolated. Regarding the antimicrobial susceptibility, one (6.6%) L. monocytogenes isolate was resistant to streptomycin and four (26.6%) to clindamycin. Macrorestriction analysis with ApaI and AscI enzymes yielded two major PFGE groups I and II. All L. monocytogenes isolates showed virulence genes, and some of them were resistant to clinically used antimicrobials, representing a risk to public health. Moreover, PFGE patterns with high similarity were visualized in L. monocytogenes isolates at different times, demonstrating adaptability of the pathogen at retail level in the region.
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Affiliation(s)
| | - Louise Haubert
- Departamento de Ciência e Tecnologia Agroindustrial, Universidade Federal de Pelotas,Pelotas, Brazil
| | | | - Isabela Schneid Kroning
- Departamento de Ciência e Tecnologia Agroindustrial, Universidade Federal de Pelotas,Pelotas, Brazil
| | | | - Graciela Völz Lopes
- Departamento de Ciência e Tecnologia Agroindustrial, Universidade Federal de Pelotas,Pelotas, Brazil
| | - Ângela Maria Fiorentini
- Departamento de Ciência e Tecnologia Agroindustrial, Universidade Federal de Pelotas,Pelotas, Brazil
| | - Wladimir Padilha da Silva
- Departamento de Ciência e Tecnologia Agroindustrial, Universidade Federal de Pelotas,Pelotas, Brazil.,Núcleo de Biotecnologia, Centro de Desenvolvimento Tecnológico, Universidade Federal de Pelotas, Pelotas, Brazil
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Coban A, Pennone V, Sudagidan M, Molva C, Jordan K, Aydin A. Prevalence, virulence characterization, and genetic relatedness of Listeria monocytogenes isolated from chicken retail points and poultry slaughterhouses in Turkey. Braz J Microbiol 2019; 50:1063-1073. [PMID: 31478167 PMCID: PMC6863211 DOI: 10.1007/s42770-019-00133-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2019] [Accepted: 08/02/2019] [Indexed: 12/17/2022] Open
Abstract
Listeria monocytogenes is one of the most important foodborne pathogens and is a causal agent of listeriosis in humans and animals. The aim of this study was to determine the prevalence, serogroups, antibiotic susceptibility, virulence factor genes, and genetic relatedness of L. monocytogenes strains isolated from 500 poultry samples in Turkey. The isolation sources of 103 L. monocytogenes strains were retail markets (n = 100) and slaughterhouses (n = 3). L. monocytogenes strains were identified as serogroups 1/2a-3a (75.7%, lineage I), 1/2c-3c (14.56%, lineage I), 1/2b-3b-7 (5.82%, lineage II), 4a-4c (2.91%, lineage III), and 4b-4d-4e (0.97%, lineage III). Most of the L. monocytogenes strains (93.2%) were susceptible to the antibiotics tested. PCR analysis indicated that the majority of the strains (95% to 100%) contained most of the virulence genes (hylA, plcA, plcB, prfA, mpl, actA, dltA, fri, flaA inlA, inlC, and inlJ). Pulsed-field gel electrophoresis (PFGE) demonstrated that there were 18 pulsotypes grouped at a similarity of > 90% among the strains. These results indicate that it is necessary to prevent the presence of L. monocytogenes in the poultry-processing environments to help prevent outbreaks of listeriosis and protect public health.
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Affiliation(s)
- Aysen Coban
- Teagasc Food Research Centre, Moorepark, Fermoy, Co. Cork, Ireland
- Faculty of Veterinary Medicine, Department of Food Hygiene and Technology, İstanbul University-Cerrahpaşa, Avcilar, Istanbul, Turkey
| | - Vincenzo Pennone
- Teagasc Food Research Centre, Moorepark, Fermoy, Co. Cork, Ireland
| | - Mert Sudagidan
- KIT-ARGEM R&D Center, Konya Food and Agriculture University, Meram, Konya, Turkey
| | - Celenk Molva
- Department of Food Engineering, Izmir Institute of Technology, Urla, Izmir, Turkey
| | - Kieran Jordan
- Teagasc Food Research Centre, Moorepark, Fermoy, Co. Cork, Ireland
| | - Ali Aydin
- Faculty of Veterinary Medicine, Department of Food Hygiene and Technology, İstanbul University-Cerrahpaşa, Avcilar, Istanbul, Turkey.
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Melero B, Manso B, Stessl B, Hernández M, Wagner M, Rovira J, Rodríguez-Lázaro D. Distribution and Persistence of Listeria monocytogenes in a Heavily Contaminated Poultry Processing Facility. J Food Prot 2019; 82:1524-1531. [PMID: 31414898 DOI: 10.4315/0362-028x.jfp-19-087] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
We studied the colonization and distribution of Listeria monocytogenes in a heavily contaminated poultry processing plant over a 1-year period. A total of 180 nonfood contact surfaces, 70 food contact surfaces, 29 personnel, and 40 food samples were analyzed. L. monocytogenes isolates were subtyped by PCR serotyping, pulsed-field gel electrophoresis (PFGE), and multilocus sequence typing. L. monocytogenes was detected in samples collected at every visit to the plant, and 43.8% (visit 4) to 65.6% (visit 7) of samples were positive, for an overall prevalence of 55.2%. The deboning area had the highest prevalence of positive samples (83.3%), and the processing area had the highest diversity of PFGE types. Ninety percent of the final products were positive for L. monocytogenes. Most of the isolates belonged to well-known persistent L. monocytogenes sequence types (ST9 and ST121). This study illustrates a well-established L. monocytogenes contamination problem in a poultry processing plant associated with a generalized failure of the food safety system as a whole. These findings reflect the potential for L. monocytogenes contamination when the food safety and quality management system is unsatisfactory, as described in the present study. It is essential to revise food safety and quality management systems to eliminate L. monocytogenes from food processing facilities, to control the entrance of sporadic sequence types, and to prevent L. monocytogenes spread within such facilities, especially in those premises with higher L. monocytogenes prevalence in the environment and final food products.
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Affiliation(s)
- Beatriz Melero
- Department of Biotechnology and Food Science, University of Burgos, Burgos, Spain (ORCID: https://orcid.org/0000-0002-8795-854X [D.R.-L.])
| | - Beatriz Manso
- Department of Biotechnology and Food Science, University of Burgos, Burgos, Spain (ORCID: https://orcid.org/0000-0002-8795-854X [D.R.-L.])
| | - Beatrix Stessl
- Institute of Milk Hygiene, Milk Technology and Food Science, Department of Veterinary Public Health and Food Science, University of Veterinary Medicine, Vienna, Austria
| | - Marta Hernández
- Department of Biotechnology and Food Science, University of Burgos, Burgos, Spain (ORCID: https://orcid.org/0000-0002-8795-854X [D.R.-L.]).,Laboratory of Molecular Biology and Microbiology, Instituto Tecnológico Agrario de Castilla y León, Valladolid, Spain
| | - Martin Wagner
- Institute of Milk Hygiene, Milk Technology and Food Science, Department of Veterinary Public Health and Food Science, University of Veterinary Medicine, Vienna, Austria
| | - Jordi Rovira
- Department of Biotechnology and Food Science, University of Burgos, Burgos, Spain (ORCID: https://orcid.org/0000-0002-8795-854X [D.R.-L.])
| | - David Rodríguez-Lázaro
- Department of Biotechnology and Food Science, University of Burgos, Burgos, Spain (ORCID: https://orcid.org/0000-0002-8795-854X [D.R.-L.])
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Garrido-Maestu A, Azinheiro S, Carvalho J, Prado M. Combination of Immunomagnetic Separation and Real-Time Recombinase Polymerase Amplification (IMS-qRPA) for Specific Detection of Listeria monocytogenes in Smoked Salmon Samples. J Food Sci 2019; 84:1881-1887. [PMID: 31264719 DOI: 10.1111/1750-3841.14662] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2019] [Revised: 04/18/2019] [Accepted: 04/23/2019] [Indexed: 01/24/2023]
Abstract
Nowadays, Listeria monocytogenes continues to be a major health issue. Therefore, improvements in the speed and reliability of its detection are still needed. In the present study, the combination of real-time Recombinase Polymerase Amplification (qRPA) with immunomagnetic separation (IMS) is described. The proposed methodology was tested against a real-time PCR method, and was successfully applied to 50 smoked salmon samples spiked at levels ranging from 2 to 9.3 × 102 cfu/25 g. L. monocytogenes was detected after a 24 hr pre-enrichment, which represents a great improvement over other previously published RPA methods. Additionally, the evaluation of the method reported a Limit of dDetection 50 (LoD50 ) of 6.3 cfu/25 g, along with relative sensitivity, specificity and accuracy values higher than 90%. Finally, the index of kappa concordance was calculated to be 0.93 which is interpreted as "almost complete concordance" between the reference and alternative method. Overall, the described methodology proved to be faster, specific, and as sensitive as other methods based on RPA or real-time PCR. PRACTICAL APPLICATION: The methodology described in this study significantly reduces the detection time of L. monocytogenes, when compared with culture-based methods, and it requires fewer steps than other molecular methods, making it a reliable and more convenient method for routine testing. Finally, the evaluation of the methodology in spiked food samples, confirms its reliability.
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Affiliation(s)
- Alejandro Garrido-Maestu
- Dept. of Life Sciences, Food Quality and Safety Research Group, Intl. Iberian Nanotechnology Lab., Av. Mestre José Veiga s/n, 4715-330, Braga, Portugal
| | - Sarah Azinheiro
- Dept. of Life Sciences, Food Quality and Safety Research Group, Intl. Iberian Nanotechnology Lab., Av. Mestre José Veiga s/n, 4715-330, Braga, Portugal
| | - Joana Carvalho
- Dept. of Life Sciences, Food Quality and Safety Research Group, Intl. Iberian Nanotechnology Lab., Av. Mestre José Veiga s/n, 4715-330, Braga, Portugal
| | - Marta Prado
- Dept. of Life Sciences, Food Quality and Safety Research Group, Intl. Iberian Nanotechnology Lab., Av. Mestre José Veiga s/n, 4715-330, Braga, Portugal
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Jia Z, Li C, Fang T, Chen J. Predictive Modeling of the Effect of ε-Polylysine Hydrochloride on Growth and Thermal Inactivation of Listeria monocytogenes in Fish Balls. J Food Sci 2018; 84:127-132. [PMID: 30569471 DOI: 10.1111/1750-3841.14420] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2018] [Revised: 11/15/2018] [Accepted: 11/16/2018] [Indexed: 11/30/2022]
Abstract
This study aimed to evaluate the effect of ε-polylysine hydrochloride (ε-PLH) on the growth and thermal inactivation kinetics of Listeria monocytogenes in fish balls. Samples, supplemented with ε-PLH (0, 150, or 300 ppm, w/w), were inoculated with a three-strain cocktail of L. monocytogenes and incubated at constant temperatures of 3.4, 8, 12, or 16 °C for growth studies, or heated at 60, 62.5, 65, or 67.5 °C for thermal inactivation tests. The growth curves were fitted to the Huang primary model, and the Huang and Ratkowsky square-root models (SRM) were used as the secondary models to evaluate the effect of temperature on bacterial growth. The survival during heating was analyzed with a log-linear model. The results showed that, while the lag time of L. monocytogenes was affected by both ε-PLH concentration and temperature, the specific growth rate was unaffected by ε-PLH. Under the same temperature, a 10-time in increase of the lag time would be expected for every 565 ppm in the increase of ε-PLH concentration. Using the Ratkowsky SRM, the estimated nominal minimum growth temperature was -2.04 °C, while the minimum growth temperature was 0.29 °C when estimated with the Huang SRM. Validation at 10 °C showed that the Huang primary model, in combination with either the Huang or Ratkowsky SRM, could accurately predict the growth of L. monocytogenes. On the other hand, the thermal resistance of the pathogen was significantly reduced by increase in temperature or ε-PLH. The thermal z value of L. monocytogenes was 5.78 °C, and the ε-PLH z value was 1642 ppm. The results of this study showed that the combined application of ε-PLH and temperature can be used to control L. monocytogenes in fish balls and to improve food safety and reduce risks to public health.
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Affiliation(s)
- Zhen Jia
- the Fujian Agriculture and Forestry Univ., Fuzhou, 350002, China
| | - Changcheng Li
- the Fujian Agriculture and Forestry Univ., Fuzhou, 350002, China
| | - Ting Fang
- the Fujian Agriculture and Forestry Univ., Fuzhou, 350002, China
| | - Jinquan Chen
- the Fujian Agriculture and Forestry Univ., Fuzhou, 350002, China
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