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Alhoshy M, Shehata AI, Habib YJ, Abdel-Latif HMR, Wang Y, Zhang Z. Nutrigenomics in crustaceans: Current status and future prospects. FISH & SHELLFISH IMMUNOLOGY 2022; 129:1-12. [PMID: 36031039 DOI: 10.1016/j.fsi.2022.08.056] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2022] [Revised: 07/23/2022] [Accepted: 08/21/2022] [Indexed: 06/15/2023]
Abstract
In aquaculture, nutrigenomics or "nutritional genomics" is concerned with studying the impacts of nutrients and food ingredients on gene expressions and understanding the interactions that may occur between nutrients and dietary bioactive ingredients with the genome and cellular molecules of the treated aquatic animals at the molecular levels that will, in turn, mediate gene expression. This concept will throw light on or provide important information to recognize better how specific nutrients may influence the overall health status of aquatic organisms. In crustaceans, it is well known that the nutritional requirements vary among different species. Thus, studying the nutrigenomics in different crustacean species is of significant importance. Of interest, recognition of the actual mechanisms that may be associated with the effects of the nutrients on the immune responses of crustaceans will provide clear outstanding protection, build a solid immune system, and also decrease the possibilities of the emergence of infectious diseases in the culture systems. Similarly, the growth, molting, lipid metabolism, antioxidant capacity, and reproduction could be effectively enhanced by using specific nutrients. In the area of crustacean research, nutrigenomics has been rapidly grown for addressing several aspects related to the influences of nutrients on crustacean development. Several researchers have studied the relationships between several functional genes and their expression profile with several physiological functions of crustaceans. They found a close association between the effects of optimal feeding with efficient production, growth, reproduction development, and health status of several crustacean species. Moreover, they illustrated that regulation of the gene expression in individual cells by different nutrients and formulated feeds could improve the growth development and immunity-boosting of several crustacean species. The present review will spotlight on such relationships between the dietary nutrients and expression of genes linked with growth, metabolism, molting, antioxidant, reproduction, and immunity of several crustacean species. The literature included in this review article will provide references and future outlooks for the upcoming research plans. This will contribute positively for maintaining the sustainability of the sector of the crustacean industry.
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Affiliation(s)
- Mayada Alhoshy
- College of Marine Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, PR China; College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, PR China
| | - Akram Ismael Shehata
- College of Marine Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, PR China; College of Life Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, PR China; Department of Animal and Fish Production, Faculty of Agriculture (Saba Basha), Alexandria University, Alexandria, 21531, Egypt
| | - Yusuf Jibril Habib
- Department of Medical Analysis, Faculty of Applied Science, Tishk International University, Erbil, Kurdistan Region, Iraq
| | - Hany M R Abdel-Latif
- Department of Poultry and Fish Diseases, Faculty of Veterinary Medicine, Alexandria University, Alexandria, 22758, Egypt
| | - Yilei Wang
- College of Fisheries, Jimei University, Xiamen, 361021, PR China
| | - Ziping Zhang
- College of Marine Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, PR China; Key Laboratory of Marine Biotechnology of Fujian Province, Institute of Oceanology, Fujian Agriculture and Forestry University, Fuzhou, 350002, PR China.
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Chen D, Guo L, Yi C, Wang S, Ru Y, Wang H. Hepatopancreatic transcriptome analysis and humoral immune factor assays in red claw crayfish (Cherax quadricarinatus) provide insight into innate immunomodulation under Vibrio parahaemolyticus infection. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2021; 217:112266. [PMID: 33930770 DOI: 10.1016/j.ecoenv.2021.112266] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2020] [Revised: 04/14/2021] [Accepted: 04/16/2021] [Indexed: 06/12/2023]
Abstract
Red claw crayfish (Cherax quadricarinatus) is an economically and nutritionally important specie. We aimed to assess the immunostimulatory response to C. quadricarinatus infection with Vibrio parahaemolyticus. After determining the LD50, we infected C. quadricarinatus and examined the differential expression profiles of hepatopancreas transcriptional genes, and observed the temporal changes of hepatopancreas pathological sections and serum immunoenzymatic activities at different time points to reveal the infection mechanism of V. parahaemolyticus and the immune detoxification mechanism of the organism. The results showed that V. parahaemolyticus infection with C. quadricarinatus caused hepatopancreas injury and the immune enzyme activity of the organism changed with time delay. Transcriptome analysis of 47,338 single genes obtained by RNA sequencing and de nove transcriptome assembly identified a total of 3678 differentially expressed genes (P < 0.05) in the expression profiles of susceptible and normal animals for comparative analysis, and 2516 differentially expressed genes (P < 0.05) in the expression profiles of asymptomatic (infection-resistant) and normal animals. GO and KEGG and analyses revealed immune-related pathways under V. parahaemolyticus infection, including Vibrio cholerae infection, phagosome, lysozyme, oxidative phosphorylation, antigen processing and presentation, apoptosis, and Toll-like receptor signaling, as well as significant differences in the expression patterns of related immune genes at different times (P < 0.05). These new experimental results reveal the molecular response of the hepatopancreas to V. parahaemolyticus infection and the corresponding adaptive mechanisms, thus further revealing the pathogenesis due to bacterial infection in the aquatic environment, and providing a reference for further understanding of microbial-host interactions in aquatic systems.
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Affiliation(s)
- Duanduan Chen
- Aquaculture Research Lab, College of Animal Science and Veterinary Medicine, Shandong Agricultural University, Taian 271018, China
| | - Leifeng Guo
- Aquaculture Research Lab, College of Animal Science and Veterinary Medicine, Shandong Agricultural University, Taian 271018, China
| | - Cao Yi
- Aquaculture Research Lab, College of Animal Science and Veterinary Medicine, Shandong Agricultural University, Taian 271018, China
| | - Shouquan Wang
- Aquaculture Research Lab, College of Animal Science and Veterinary Medicine, Shandong Agricultural University, Taian 271018, China
| | - Yuanyuan Ru
- Aquaculture Research Lab, College of Animal Science and Veterinary Medicine, Shandong Agricultural University, Taian 271018, China
| | - Hui Wang
- Aquaculture Research Lab, College of Animal Science and Veterinary Medicine, Shandong Agricultural University, Taian 271018, China.
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Li Y, Liu Z, Li M, Jiang Q, Wu D, Huang Y, Jiao Y, Zhang M, Zhao Y. Effects of nanoplastics on antioxidant and immune enzyme activities and related gene expression in juvenile Macrobrachium nipponense. JOURNAL OF HAZARDOUS MATERIALS 2020; 398:122990. [PMID: 32516731 DOI: 10.1016/j.jhazmat.2020.122990] [Citation(s) in RCA: 111] [Impact Index Per Article: 27.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2020] [Revised: 05/15/2020] [Accepted: 05/15/2020] [Indexed: 06/11/2023]
Abstract
Nanoplastics are widely distributed in aquatic environments, and nanoplastic pollution has become a global concern. However, few studies have evaluated the toxicity of nanoplastics to freshwater crustaceans. In this study, by adding different concentrations of nanoplastics to water, we explored the effects of nanoplastics on the survival, antioxidant activity, immune enzyme activity, and related gene expression levels in juvenile Macrobrachium nipponense. The results showed that the 96 -h half-lethal concentration of nanoplastics to juvenile shrimp was 396.391 mg/L. As the concentration of nanoplastics increased, the activities of antioxidant enzymes generally decreased, while the contents of hydrogen peroxide and lipid peroxidation products increased. The activities of non-specific immune enzymes first increased and then decreased with increasing nanoplastic concentration. The trends in the expressions of antioxidant-related genes were generally consistent with those in the activities of antioxidant enzymes. As the nanoplastic concentration increased, the expressions of immune-related genes generally increased at first and then decreased. These results indicate that low concentrations of nanoplastics (5 mg/L) may enhance the viability of juvenile shrimp, whereas high concentrations (10,20, 40 mg/L) have inhibitory and/or toxic effects. The findings provide basic information on the toxic effects of nanoplastics in juvenile shrimp.
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Affiliation(s)
- Yiming Li
- School of Life Science, East China Normal University, Shanghai 200241, China
| | - Zhiquan Liu
- School of Life Science, East China Normal University, Shanghai 200241, China
| | - Maofeng Li
- School of Life Science, East China Normal University, Shanghai 200241, China
| | - Qichen Jiang
- Freshwater Fisheries Research Institute of Jiangsu Province, Nanjing 210017, China
| | - Donglei Wu
- School of Life Science, East China Normal University, Shanghai 200241, China
| | - Youhui Huang
- School of Life Science, East China Normal University, Shanghai 200241, China
| | - Yang Jiao
- School of Life Science, East China Normal University, Shanghai 200241, China
| | - Meng Zhang
- School of Life Science, East China Normal University, Shanghai 200241, China
| | - Yunlong Zhao
- School of Life Science, East China Normal University, Shanghai 200241, China; State Key Laboratory of Estuarine and Coastal Research, East China Normal University, Shanghai 200241, China.
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Huang Y, Ren Q. Research progress in innate immunity of freshwater crustaceans. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY 2020; 104:103569. [PMID: 31830502 DOI: 10.1016/j.dci.2019.103569] [Citation(s) in RCA: 56] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2019] [Revised: 12/07/2019] [Accepted: 12/08/2019] [Indexed: 06/10/2023]
Abstract
Invertebrates lack adaptive immunity and innate immunity plays important roles in combating foreign invasive pathogens. Freshwater crustaceans, which are invertebrates, depend completely on their innate immune system. In recent years, many immune-related molecules in freshwater crustaceans, as well as their functions, have been identified. Three main immune signaling pathways, namely, Toll, immune deficiency (IMD), and Janus kinase-signal transducer activator of transcription (JAK/STAT) pathways, were found in freshwater crustaceans. A series of pattern recognition receptors (PRRs), including Toll receptors, lectins, lipopolysaccharide and β-1,3-glucan binding protein, scavenger receptors, Down syndrome cell adhesion molecules, and thioester-containing proteins, were reported. Prophenoloxidase activation system and antimicrobial peptide synthesis are two important immune effector systems. These components are involved in the innate immunity of freshwater crustaceans, and they function in the innate immune defense against invading pathogens. This review mainly summarizes innate immune signaling pathways, PRRs, and effector molecules in freshwater crustaceans.
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Affiliation(s)
- Ying Huang
- College of Oceanography, Hohai University, 1 Xikang Road, Nanjing, Jiangsu, 210098, China; Postdoctoral Innovation Practice Base, Jiangsu Shuixian Industrial Company Limited, 40 Tonghu Road, Baoying, Yangzhou, Jiangsu, 225800, China
| | - Qian Ren
- Co-Innovation Center for Marine Bio-Industry Technology of Jiangsu Province, Lianyungang, Jiangsu, 222005, China; College of Marine Science and Engineering, Nanjing Normal University, 1 Wenyuan Road, Nanjing, Jiangsu, 210023, China.
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Involvement of a TNF homologue in balancing the host immune system of Macrobrachium nipponense. Int J Biol Macromol 2019; 134:73-79. [DOI: 10.1016/j.ijbiomac.2019.05.045] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2019] [Revised: 04/23/2019] [Accepted: 05/06/2019] [Indexed: 02/08/2023]
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Ren X, Liu P, Li J. Comparative transcriptomic analysis of Marsupenaeus japonicus hepatopancreas in response to Vibrio parahaemolyticus and white spot syndrome virus. FISH & SHELLFISH IMMUNOLOGY 2019; 87:755-764. [PMID: 30790658 DOI: 10.1016/j.fsi.2019.02.030] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2018] [Revised: 02/13/2019] [Accepted: 02/15/2019] [Indexed: 06/09/2023]
Abstract
Vibrio parahaemolyticus and white spot syndrome virus (WSSV) are pathogens that cause epidemics in kuruma shrimp (Marsupenaeus japonicus) during aquaculture, resulting in severe economic losses to local farmers. To characterise the mechanisms of the molecular responses to V. parahaemolyticus and WSSV infection in M. japonicus, the transcriptome of hepatopancreas was sequenced using next-generation sequencing after infection. A total of 29,180 unigenes were assembled, with an average length of 1,151 bp (N50 = 1,951 bp). After BLASTX searching against the Nr database (E-value cut-off = 10-5), 15,176 assembled unigenes remained, with 3,039 and 1,803 differentially expressed transcripts identified in the V. parahaemolyticus- and WSSV-infected groups, respectively. Of these, 1466 transcripts were up-regulated and 1573 were down-regulated in V. parahaemolyticus-infected shrimps, and 970 transcripts were up-regulated and 833 were down-regulated in the WSSV-infected shrimps. Additionally, 761 transcripts were differentially expressed in both V. parahaemolyticus- and WSSV-infected shrimps. Several known immune-related genes including caspase 4, integrin, crustin, ubiquitin-conjugating enzyme E2, C-type lectin, and α2-macroglobulin were among the differentially expressed transcripts. These results provide valuable information for characterising the immune mechanisms of the shrimp responses of to V. parahaemolyticus andWSSV infection.
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Affiliation(s)
- Xianyun Ren
- Key Laboratory for Sustainable Utilization of Marine Fisheries Resources, Ministry of Agriculture, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, PR China; Function Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao, PR China
| | - Ping Liu
- Key Laboratory for Sustainable Utilization of Marine Fisheries Resources, Ministry of Agriculture, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, PR China; Function Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao, PR China
| | - Jian Li
- Key Laboratory for Sustainable Utilization of Marine Fisheries Resources, Ministry of Agriculture, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, PR China; Function Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, Qingdao, PR China.
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Zhang D, Wan W, Kong T, Zhang M, Aweya JJ, Gong Y, Li S. A clip domain serine protease regulates the expression of proPO and hemolymph clotting in mud crab, Scylla paramamosain. FISH & SHELLFISH IMMUNOLOGY 2018; 79:52-64. [PMID: 29747010 DOI: 10.1016/j.fsi.2018.05.013] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2018] [Revised: 04/30/2018] [Accepted: 05/06/2018] [Indexed: 06/08/2023]
Abstract
The clip domain serine proteinases (clip-SPs) play vital roles in embryonic development and in various innate immune functions in invertebrates such as antimicrobial activity, cell adhesion, hemolymph clotting, pattern recognition and regulation of the prophenoloxidase system. However, little is known about the role of the clip domain serine proteinase in Scylla paramamosain (designated SpcSP) immunity. In the present study, we cloned a clip-SP from S. paramamosain hemocytes using rapid amplification of cDNA end (RACE) approach. The full-length cDNA of SpcSP was 1823 bp, containing a 5' untranslated region (UTR) of 334 bp, an open reading frame of 1122 bp, and a 3' UTR of 367 bp. The open reading frame encoded a polypeptide of 373 amino acids with a calculated molecular weight of 39.7 kDa and an isoelectric point of 6.64. Structurally, SpcSP has a predicted 21-residue signal peptide and possessed the characteristic features of the clip domain family of serine proteases, namely one clip domain in the amino-terminal with six highly conserved cysteine residues and one enzyme active serine proteinase domain in the carboxyl-terminal with a highly conserved catalytic triad (His156, Asp226, Ser321). Phylogenetic analysis showed that SpcSP was clustered together with PtcSP (clip domain serine proteinase from Portunus trituberculatus). Quantitative real-time PCR (qPCR) analysis showed that the mRNA of SpcSP was constitutively expressed at different levels in all tested tissues in untreated S. paramamosain, with hemocytes and skin expressing the most. The transcriptional level of SpcSP in hemocytes was significantly up-regulated upon challenge with V. parahaemolyticus and LPS, indicating its involvement in antibacterial immune response. Indirect immunofluorescence analysis showed that SpcSP was expressed in the cytoplasm of all three hemocyte cell types (hyaline, semigranular and granular cells). Further, recombinant SpcSP protein exhibited strong binding ability and has antimicrobial activity against both Gram-positive and Gram-negative bacteria as well as fungi. Moreover, knockdown of SpcSP resulted in increased hemolymph clotting time and decreased the mRNA expression of SpproPO mRNA in hemocytes. These findings therefore suggest that SpcSP plays an important role in the antimicrobial defense mechanism of S. paramamosain by regulating the expression of SpproPO and hemolymph clotting in S. paramamosain.
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Affiliation(s)
- Daimeng Zhang
- Guangdong Provincial Key Laboratory of Marine Biology, Shantou University, Shantou 515063, China; Marine Biology Institute, Shantou University, Shantou 515063, China
| | - Weisong Wan
- Guangdong Provincial Key Laboratory of Marine Biology, Shantou University, Shantou 515063, China; Marine Biology Institute, Shantou University, Shantou 515063, China
| | - Tongtong Kong
- Guangdong Provincial Key Laboratory of Marine Biology, Shantou University, Shantou 515063, China; Marine Biology Institute, Shantou University, Shantou 515063, China
| | - Ming Zhang
- Guangdong Provincial Key Laboratory of Marine Biology, Shantou University, Shantou 515063, China; Marine Biology Institute, Shantou University, Shantou 515063, China
| | - Jude Juventus Aweya
- Guangdong Provincial Key Laboratory of Marine Biology, Shantou University, Shantou 515063, China; Marine Biology Institute, Shantou University, Shantou 515063, China
| | - Yi Gong
- Guangdong Provincial Key Laboratory of Marine Biology, Shantou University, Shantou 515063, China; Marine Biology Institute, Shantou University, Shantou 515063, China
| | - Shengkang Li
- Guangdong Provincial Key Laboratory of Marine Biology, Shantou University, Shantou 515063, China; Marine Biology Institute, Shantou University, Shantou 515063, China.
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Wang Y, Tang T, Gu J, Li X, Yang X, Gao X, Liu F, Wang J. Identification of five anti-lipopolysaccharide factors in oriental river prawn, Macrobrachium nipponense. FISH & SHELLFISH IMMUNOLOGY 2015; 46:252-260. [PMID: 26159095 DOI: 10.1016/j.fsi.2015.07.003] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2015] [Revised: 06/25/2015] [Accepted: 07/01/2015] [Indexed: 06/04/2023]
Abstract
Anti-lipopolysaccharide factors (ALFs) are a group of antimicrobial peptides (AMPs) with broad-spectrum antimicrobial activities and antiviral activities mainly found in crustaceans and horseshoe crabs. In the present study, we identified 5 ALF expression sequence tags (ESTs) through analysis of the established M. nipponense transcriptome, and cloned their full-length cDNA sequences using rapid amplification of cDNA ends (RACE) method. The 5 ALFs were designated as MnALF1-5, and all of them showed high similarity with their Macrobrachium rosenbergii homologs in the phylogenetic analyses, especially in LPS binding domains. In healthy adult prawns, we found the highest expression of MnALF2 and MnALF4 in haemocytes, and the highest expression of MnALF4 and MnALF3 in intestine. Some isoforms of MnALF were down-regulated but the majority was up-regulated in different prawn tissues upon Aeromonas hydrophila challenge. To conform the expected antimicrobial activities harbored in MnALFs' LPS binding domains, we used a synthesized peptide cMnALF24 that corresponds to the LPS binding domain of MnALF2 as a representative molecule for the antibacterial activity test, and found that cMnALF24 possessed strong and broad-spectrum antibacterial activity against Gram positive and Gram negative bacteria, but no inhibition activity against fungi; Meanwhile, in the hemolytic test, cMnALF24 showed weak hemolysis activities (around 10%) to the rabbit red blood cells at concentrations of 0.67-33.50 μM. This study provides insights into understanding the antibacterial function of ALFs in the innate immunity of freshwater prawn, and reports a peptide that can be a potential drug candidate with good efficacy against bacterial infection and low toxicity to host cells.
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Affiliation(s)
- Yili Wang
- College of Life Sciences, Hebei University, Baoding, Hebei, China
| | - Ting Tang
- College of Life Sciences, Hebei University, Baoding, Hebei, China; The Key Laboratory of Zoological Systematics and Application, College of Life Sciences, Hebei University, Baoding, Hebei, 071002, China
| | - Jihai Gu
- College of Life Sciences, Hebei University, Baoding, Hebei, China
| | - Xiang Li
- College of Life Sciences, Hebei University, Baoding, Hebei, China
| | - Xue Yang
- College of Life Sciences, Hebei University, Baoding, Hebei, China
| | - Xiaobin Gao
- Department of Pathology, Yale University, New Haven, CT, USA
| | - Fengsong Liu
- College of Life Sciences, Hebei University, Baoding, Hebei, China; The Key Laboratory of Zoological Systematics and Application, College of Life Sciences, Hebei University, Baoding, Hebei, 071002, China.
| | - Jianhui Wang
- Department of Pathology, Yale University, New Haven, CT, USA.
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