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Onat-Taşdelen KA, Öztürkel-Kabakaş H, Yüksektepe E, Çatav ŞS, Güzel G, Çöl B, Kim H, Chae YK, Elgin ES. Functional groups matter: metabolomics analysis of Escherichia coli exposed to trans-cinnamic acid and its derivatives unveils common and unique targets. World J Microbiol Biotechnol 2023; 40:47. [PMID: 38114822 DOI: 10.1007/s11274-023-03841-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Accepted: 11/13/2023] [Indexed: 12/21/2023]
Abstract
Phenolic acids are derivatives of benzoic and cinnamic acids, which possess important biological activities at certain concentrations. Trans-cinnamic acid (t-CA) and its derivatives, such as p-coumaric acid (p-CA) and ferulic acid (FA) have been shown to have antibacterial activity against various Gram-positive and -negative bacteria. However, there is limited information available concerning the antibacterial mode of action of these phenolic acids. In this study, we aimed to ascertain metabolic alterations associated with exposure to t-CA, p-CA, and FA in Escherichia coli BW25113 using a nuclear magnetic resonance (NMR)-based metabolomics approach. The results showed that t-CA, p-CA, and FA treatments led to significant changes (p < 0.05) in the concentration of 42, 55, and 74% of the identified metabolites in E. coli, respectively. Partial least-squares discriminant analysis (PLS-DA) revealed a clear separation between control and phenolic acid groups with regard to metabolic response. Moreover, it was found that FA and p-CA treatment groups were clustered closely together but separated from the t-CA treatment group. Arginine, putrescine, cadaverine, galactose, and sucrose had the greatest impact on group differentiation. Quantitative pathway analysis demonstrated that arginine and proline, pyrimidine, glutathione, and galactose metabolisms, as well as aminoacyl-tRNA and arginine biosyntheses, were markedly affected by all phenolic acids. Finally, the H2O2 content of E. coli cells was significantly increased in response to t-CA and p-CA whereas all phenolic acids caused a dramatic increase in the number of apurinic/apyrimidinic sites. Overall, this study suggests that the metabolic response of E. coli cells to t-CA is relatively different from that to p-CA and FA. However, all phenolic acids had a certain impact on oxidative/antioxidant status, genomic stability, arginine-related pathways, and nucleic acid metabolism.
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Affiliation(s)
| | - Hatice Öztürkel-Kabakaş
- Graduate School of Natural and Applied Sciences, Biology Program, Muğla Sıtkı Koçman University, Muğla, Türkiye
| | - Ecem Yüksektepe
- Vocational School of Health Services, Pathology Laboratory Techniques Program, Fenerbahçe University, İstanbul, Türkiye
| | - Şükrü Serter Çatav
- College of Sciences, Department of Biology, Muğla Sıtkı Koçman University, Muğla, Türkiye
| | - Gülnur Güzel
- Graduate School of Natural and Applied Sciences, Chemistry Program, Muğla Sıtkı Koçman University, Muğla, Türkiye
| | - Bekir Çöl
- College of Sciences, Department of Biology, Muğla Sıtkı Koçman University, Muğla, Türkiye
- Biotechnology Research Center, Muğla Sıtkı Koçman University, Muğla, Türkiye
| | - Hakbeom Kim
- College of Natural Sciences, Department of Chemistry, Sejong University, Seoul, South Korea
| | - Young Kee Chae
- College of Natural Sciences, Department of Chemistry, Sejong University, Seoul, South Korea
| | - Emine Sonay Elgin
- College of Sciences, Department of Chemistry, Muğla Sıtkı Koçman University, Muğla, Türkiye.
- Research Laboratories Center, Metabolism Laboratory, Muğla Sıtkı Koçman University, Muğla, Türkiye.
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2
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Letsiou S, Trapali M, Tebbi SO, Benaida-Debbache N. A simple and robust LC-ESI single quadrupole MS-based method to analyze polyphenols in plant extracts using deep eutectic solvents. MethodsX 2023; 11:102303. [PMID: 37593413 PMCID: PMC10428130 DOI: 10.1016/j.mex.2023.102303] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Accepted: 07/26/2023] [Indexed: 08/19/2023] Open
Abstract
Currently, the interest in polyphenols is increasing due to their significant properties in health. Polyphenols exist in a range of natural products, however their extraction as well as their characterization are important issues as they are mainly present in complex matrices. Therefore, sensitive and selective analytical methods based on liquid chromatography coupled to tandem mass spectrometry are essential. Nevertheless, access to such high-resolution techniques is quite rare. Thus, in this work we present a simple, selective and robust method based on a single-quadrupole (Q) MS technique) for the analysis of a wide range of polyphenols such as flavonoids, phenolic acids and anthocyanins. Specifically, we present:•A simple liquid chromatography electro-spray ionization (LC-ESI) single-quadrupole mass selective (MS) method for the analysis of 18 different polyphenols.•Application of the method to three plant-based extracts that are derived after green extraction methods.
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Affiliation(s)
- Sophia Letsiou
- Laboratory of chemistry, biochemistry and cosmetic science, Department of Biomedical Science, University of West Attica, Agiou Spyridonos 28, Egaleo, Attiki, Greece
| | - Maria Trapali
- Laboratory of chemistry, biochemistry and cosmetic science, Department of Biomedical Science, University of West Attica, Agiou Spyridonos 28, Egaleo, Attiki, Greece
| | - Sara Oumenoune Tebbi
- Laboratoire de Biochimie Appliquée, Faculté des Sciences de la Nature et de la Vie, Université de Bejaia, Bejaia 06000, Algeria
| | - Nadjet Benaida-Debbache
- Laboratoire de Biochimie Appliquée, Faculté des Sciences de la Nature et de la Vie, Université de Bejaia, Bejaia 06000, Algeria
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3
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Vargas-Madriz ÁF, Luzardo-Ocampo I, Chávez-Servín JL, Moreno-Celis U, Roldán-Padrón O, Vargas-Madriz H, Vergara-Castañeda HA, Kuri-García A. Comparison of Phenolic Compounds and Evaluation of Antioxidant Properties of Porophyllum ruderale (Jacq.) Cass ( Asteraceae) from Different Geographical Areas of Queretaro (Mexico). PLANTS (BASEL, SWITZERLAND) 2023; 12:3569. [PMID: 37896032 PMCID: PMC10609970 DOI: 10.3390/plants12203569] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2023] [Revised: 10/10/2023] [Accepted: 10/11/2023] [Indexed: 10/29/2023]
Abstract
Porophyllum ruderale (P. ruderale) is a well-known Mexican plant from the group of "Quelites", widely consumed plant species used for several food and medicinal purposes. As the production is very heterogeneous and the diverse agroclimatic conditions significantly impact the plant's phytochemical composition, this research aimed to compare the phenolic compound composition and the antioxidant capacity of the P. ruderale plant from three different collection sites (Queretaro, Landa de Matamoros, and Arroyo Seco) in the State of Queretaro (Mexico). Plants collected from Queretaro displayed the lowest total phenolic compounds, flavonoids, and condensed tannins, reflected in a lower antioxidant capacity (DPPH, FRAP, ABTS), compared to the other collection places. Flavones (epicatechin and epigallocatechin gallate) were the most abundant (36.1-195.2 μg equivalents/g) phenolics quantified by HPLC-DAD, while 31 compounds were identified by UHPLC-DAD-QToF/MS-ESI. Most compounds were linked to biological mechanisms related to the antioxidant properties of the leaves. A PCA analysis clustered Landa de Matamoros and Arroyo Seco into two groups based on flavones, hydroxybenzoic acids, the antioxidant capacity (ABTS and DPPH), and total phenolic compounds, the main contributors to its variation. The results indicated contrasting differences in the polyphenolic composition of collected P. ruderale in Queretaro, suggesting the need to standardize and select plants with favorable agroclimatic conditions to obtain desirable polyphenolic compositions while displaying potential health benefits.
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Affiliation(s)
- Ángel Félix Vargas-Madriz
- Department of Cell and Molecular Biology, School of Natural Sciences, Universidad Autonoma de Queretaro, Qro 76230, Mexico; (Á.F.V.-M.); (J.L.C.-S.); (U.M.-C.); (O.R.-P.)
| | - Ivan Luzardo-Ocampo
- Tecnologico de Monterrey, The Institute for Obesity Research, Ave. Eugenio Garza Sada 2501 Sur, Monterrey 64841, Mexico;
- Tecnologico de Monterrey, School of Engineering and Sciences, Campus Guadalajara, Av. General Ramon Corona 2514, Zapopan 45201, Mexico
| | - Jorge Luis Chávez-Servín
- Department of Cell and Molecular Biology, School of Natural Sciences, Universidad Autonoma de Queretaro, Qro 76230, Mexico; (Á.F.V.-M.); (J.L.C.-S.); (U.M.-C.); (O.R.-P.)
| | - Ulisses Moreno-Celis
- Department of Cell and Molecular Biology, School of Natural Sciences, Universidad Autonoma de Queretaro, Qro 76230, Mexico; (Á.F.V.-M.); (J.L.C.-S.); (U.M.-C.); (O.R.-P.)
| | - Octavio Roldán-Padrón
- Department of Cell and Molecular Biology, School of Natural Sciences, Universidad Autonoma de Queretaro, Qro 76230, Mexico; (Á.F.V.-M.); (J.L.C.-S.); (U.M.-C.); (O.R.-P.)
| | - Haidel Vargas-Madriz
- Department of Agricultural Production, Centro Universitario de la Costa Sur, University of Guadalajara, Av. Independencia Nacional, No. 151, Autlán 48900, Mexico;
| | | | - Aarón Kuri-García
- Department of Cell and Molecular Biology, School of Natural Sciences, Universidad Autonoma de Queretaro, Qro 76230, Mexico; (Á.F.V.-M.); (J.L.C.-S.); (U.M.-C.); (O.R.-P.)
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Talib WH, AlHur MJ, Al.Naimat S, Ahmad RE, Al-Yasari AH, Al-Dalaeen A, Thiab S, Mahmod AI. Anticancer Effect of Spices Used in Mediterranean Diet: Preventive and Therapeutic Potentials. Front Nutr 2022; 9:905658. [PMID: 35774546 PMCID: PMC9237507 DOI: 10.3389/fnut.2022.905658] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2022] [Accepted: 05/16/2022] [Indexed: 01/18/2023] Open
Abstract
Cancer is one of the leading causes of death worldwide, with almost 10 million cancer-related deaths worldwide in 2020, so any investigation to prevent or cure this disease is very important. Spices have been studied widely in several countries to treat different diseases. However, studies that summarize the potential anticancer effect of spices used in Mediterranean diet are very limited. This review highlighted chemo-therapeutic and chemo-preventive effect of ginger, pepper, rosemary, turmeric, black cumin and clove. Moreover, the mechanisms of action for each one of them were figured out such as anti-angiogenesis, antioxidant, altering signaling pathways, induction of cell apoptosis, and cell cycle arrest, for several types of cancer. The most widely used spice in Mediterranean diet is black pepper (Piper nigrum L). Ginger and black cumin have the highest anticancer activity by targeting multiple cancer hallmarks. Apoptosis induction is the most common pathway activated by different spices in Mediterranean diet to inhibit cancer. Studies discussed in this review may help researchers to design and test new anticancer diets enriched with selected spices that have high activities.
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Affiliation(s)
- Wamidh H. Talib
- Department of Clinical Pharmacy and Therapeutics, Applied Science Private University, Amman, Jordan
- *Correspondence: Wamidh H. Talib
| | - Mallak J. AlHur
- Office of Scientific Affairs and Research, King Hussein Cancer Center, Amman, Jordan
| | - Sumaiah Al.Naimat
- Office of Scientific Affairs and Research, King Hussein Cancer Center, Amman, Jordan
| | - Rawand E. Ahmad
- Department of Clinical Pharmacy and Therapeutics, Applied Science Private University, Amman, Jordan
| | | | - Anfal Al-Dalaeen
- Department of Clinical Nutrition and Dietetics, Faculty of Pharmacy, Applied Science Private University, Amman, Jordan
| | - Samar Thiab
- Department of Pharmaceutical Chemistry and Pharmacognosy, Applied Science Private University, Amman, Jordan
| | - Asma Ismail Mahmod
- Department of Clinical Pharmacy and Therapeutics, Applied Science Private University, Amman, Jordan
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5
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Özcan MM, Uslu N, Efe NS, Erdem AN, Değerli Z, Kulluk DA, Can Sağlık N. Effect of thermal processing on the bioactive compounds and color parameters of types of three sweet pepper. J FOOD PROCESS PRES 2021. [DOI: 10.1111/jfpp.15661] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Mehmet Musa Özcan
- Department of Food Engineering Faculty of Agriculture Selcuk University Konya Turkey
| | - Nurhan Uslu
- Department of Food Engineering Faculty of Agriculture Selcuk University Konya Turkey
| | - Nazife Sultan Efe
- Department of Food Engineering Faculty of Agriculture Selcuk University Konya Turkey
| | - Ayşe Nur Erdem
- Department of Food Engineering Faculty of Agriculture Selcuk University Konya Turkey
| | - Zeliha Değerli
- Department of Food Engineering Faculty of Agriculture Selcuk University Konya Turkey
| | - Duygu Akçay Kulluk
- Department of Soil Science Faculty of Agriculture Selcuk University Konya Turkey
| | - Nazlı Can Sağlık
- Department of Soil Science Faculty of Agriculture Selcuk University Konya Turkey
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6
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Valdés-Jiménez A, Peña-Varas C, Borrego-Muñoz P, Arrue L, Alegría-Arcos M, Nour-Eldin H, Dreyer I, Nuñez-Vivanco G, Ramírez D. PSC-db: A Structured and Searchable 3D-Database for Plant Secondary Compounds. Molecules 2021; 26:1124. [PMID: 33672700 PMCID: PMC7924326 DOI: 10.3390/molecules26041124] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2021] [Revised: 02/11/2021] [Accepted: 02/17/2021] [Indexed: 12/23/2022] Open
Abstract
Plants synthesize a large number of natural products, many of which are bioactive and have practical values as well as commercial potential. To explore this vast structural diversity, we present PSC-db, a unique plant metabolite database aimed to categorize the diverse phytochemical space by providing 3D-structural information along with physicochemical and pharmaceutical properties of the most relevant natural products. PSC-db may be utilized, for example, in qualitative estimation of biological activities (Quantitative Structure-Activity Relationship, QSAR) or massive docking campaigns to identify new bioactive compounds, as well as potential binding sites in target proteins. PSC-db has been implemented using the open-source PostgreSQL database platform where all compounds with their complementary and calculated information (classification, redundant names, unique IDs, physicochemical properties, etc.) were hierarchically organized. The source organism for each compound, as well as its biological activities against protein targets, cell lines and different organism were also included. PSC-db is freely available for public use and is hosted at the Universidad de Talca.
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Affiliation(s)
- Alejandro Valdés-Jiménez
- Center for Bioinformatics, Simulations, and Modeling (CBSM), Faculty of Engineering, University of Talca, Talca 3460000, Chile; (A.V.-J.); (I.D.); (G.N.-V.)
| | - Carlos Peña-Varas
- Instituto de Ciencias Biomédicas, Universidad Autónoma de Chile, Santiago 8900000, Chile; (C.P.-V.); (L.A.); (M.A.-A.)
| | - Paola Borrego-Muñoz
- Bioorganic Chemistry Laboratory, Facultad de Ciencias Básicas y Aplicadas, Campus Nueva Granada, Universidad Militar Nueva Granada, Cajicá 250247, Colombia;
| | - Lily Arrue
- Instituto de Ciencias Biomédicas, Universidad Autónoma de Chile, Santiago 8900000, Chile; (C.P.-V.); (L.A.); (M.A.-A.)
| | - Melissa Alegría-Arcos
- Instituto de Ciencias Biomédicas, Universidad Autónoma de Chile, Santiago 8900000, Chile; (C.P.-V.); (L.A.); (M.A.-A.)
| | - Hussam Nour-Eldin
- DynaMo Center, Department of Plant and Environmental Sciences, University of Copenhagen, 1017 Copenhagen, Denmark;
| | - Ingo Dreyer
- Center for Bioinformatics, Simulations, and Modeling (CBSM), Faculty of Engineering, University of Talca, Talca 3460000, Chile; (A.V.-J.); (I.D.); (G.N.-V.)
| | - Gabriel Nuñez-Vivanco
- Center for Bioinformatics, Simulations, and Modeling (CBSM), Faculty of Engineering, University of Talca, Talca 3460000, Chile; (A.V.-J.); (I.D.); (G.N.-V.)
| | - David Ramírez
- Instituto de Ciencias Biomédicas, Universidad Autónoma de Chile, Santiago 8900000, Chile; (C.P.-V.); (L.A.); (M.A.-A.)
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7
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Nina N, Theoduloz C, Giménez A, Schmeda-Hirschmann G. Phenolics from the Bolivian highlands food plant Ombrophytum subterraneum (Aspl.) B. Hansen (Balanophoraceae): Antioxidant and α-glucosidase inhibitory activity. Food Res Int 2020; 137:109382. [PMID: 33233084 DOI: 10.1016/j.foodres.2020.109382] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2020] [Revised: 05/23/2020] [Accepted: 06/02/2020] [Indexed: 02/08/2023]
Abstract
The Balanophoraceae Ombrophytum subterraneum is an endemic highland food plant occurring in Bolivia, northern Argentina and Chile. The upper part of this parasitic plant is eaten fresh. The aim of this work was to characterize the compounds occurring in the edible part and to assess any differences between the inflorescence and tuber. Ethanol extracts of the different plant parts were analyzed for antioxidant activity by the ORAC, TEAC, FRAP, CUPRAC and DPPH methods as well as for the effect on enzymes related to metabolic syndrome (α-amylase, α-glucosidase and pancreatic lipase). The main constituents were isolated by a combination of gel permeation in Sephadex LH-20 and countercurrent chromatography (CCC). Five compounds were isolated and fully identified by spectroscopic and spectrometric means. The new 3',5,5',7-tetrahydroxyflavanone 7-O-β-D-1 → 6 diglucoside was isolated for the first time. HPLC-ESI-MS/MS analysis allowed the identification of 19 compounds, including flavanones, flavanols, flavonols, dehydroflavonols and lignans, mainly as glycosides. A strong inhibition towards α-glucosidase was observed for the edible parts (IC50: 1.46 µg/mL) as well as for the tuber and inflorescence (IC50: 1.56 µg/mL and 0.87 µg/mL, respectively). A significant correlation was established between the total phenolic and the antioxidant capacity of the extracts as well as with the content of the new flavanone diglucoside. This is the first comprehensive report on the naturally occurring antioxidants and enzyme inhibitors from this native highland food resource.
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Affiliation(s)
- Nélida Nina
- Laboratorio de Química de Productos Naturales, Instituto de Química de Recursos Naturales, Universidad de Talca, Campus Lircay, 3460000 Talca, Chile
| | - Cristina Theoduloz
- Laboratorio de Cultivo Celular, Facultad de Ciencias de la Salud, Universidad de Talca, Campus Lircay, 3460000 Talca, Chile
| | - Alberto Giménez
- Instituto de Investigaciones Fármaco-Bioquímicas, Facultad de Ciencias Farmacéuticas y Bioquímicas, Universidad Mayor de San Andrés, La Paz, Bolivia
| | - Guillermo Schmeda-Hirschmann
- Laboratorio de Química de Productos Naturales, Instituto de Química de Recursos Naturales, Universidad de Talca, Campus Lircay, 3460000 Talca, Chile.
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8
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Allegra A, Tonacci A, Pioggia G, Musolino C, Gangemi S. Anticancer Activity of Rosmarinus officinalis L.: Mechanisms of Action and Therapeutic Potentials. Nutrients 2020; 12:E1739. [PMID: 32532056 PMCID: PMC7352773 DOI: 10.3390/nu12061739] [Citation(s) in RCA: 48] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2020] [Revised: 06/05/2020] [Accepted: 06/08/2020] [Indexed: 12/16/2022] Open
Abstract
Alternative treatments for neoplastic diseases with new drugs are necessary because the clinical effectiveness of chemotherapy is often reduced by collateral effects. Several natural substances of plant origin have been demonstrated to be successful in the prevention and treatment of numerous tumors. Rosmarinus officinalis L. is a herb that is cultivated in diverse areas of the world. There is increasing attention being directed towards the pharmaceutical capacities of rosemary, utilized for its anti-inflammatory, anti-infective or anticancer action. The antitumor effect of rosemary has been related to diverse mechanisms, such as the antioxidant effect, antiangiogenic properties, epigenetic actions, regulation of the immune response and anti-inflammatory response, modification of specific metabolic pathways, and increased expression of onco-suppressor genes. In this review, we aim to report the results of preclinical studies dealing with the anticancer effects of rosemary, the molecular mechanisms related to these actions, and the interactions between rosemary and anticancer drugs. The prospect of utilizing rosemary as an agent in the treatment of different neoplastic diseases is discussed. However, although the use of rosemary in the therapy of neoplasms constitutes a fascinating field of study, large and controlled studies must be conducted to definitively clarify the real impact of this substance in clinical practice.
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Affiliation(s)
- Alessandro Allegra
- Division of Haematology, Department of Human Pathology in Adulthood and Childhood “Gaetano Barresi”, University of Messina, 98125 Messina, Italy;
| | - Alessandro Tonacci
- Clinical Physiology Institute, National Research Council of Italy (IFC-CNR), 56124 Pisa, Italy;
| | - Giovanni Pioggia
- Institute for Biomedical Research and Innovation (IRIB), National Research Council of Italy (CNR), 98164 Messina, Italy;
| | - Caterina Musolino
- Division of Haematology, Department of Human Pathology in Adulthood and Childhood “Gaetano Barresi”, University of Messina, 98125 Messina, Italy;
| | - Sebastiano Gangemi
- School and Operative Unit of Allergy and Clinical Immunology, Department of Clinical and Experimental Medicine, University of Messina, 98125 Messina, Italy;
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López-Fernández O, Domínguez R, Pateiro M, Munekata PE, Rocchetti G, Lorenzo JM. Determination of Polyphenols Using Liquid Chromatography-Tandem Mass Spectrometry Technique (LC-MS/MS): A Review. Antioxidants (Basel) 2020; 9:antiox9060479. [PMID: 32498428 PMCID: PMC7346120 DOI: 10.3390/antiox9060479] [Citation(s) in RCA: 65] [Impact Index Per Article: 16.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2020] [Revised: 05/25/2020] [Accepted: 05/31/2020] [Indexed: 12/14/2022] Open
Abstract
In recent years, the consumption of polyphenols has been increasing, largely due to its beneficial effects on health. They are present in a wide variety of foods, but their extraction and characterization are complicated since they are mostly in complex matrices. For this reason, the use of selective, sensitive, and versatile analytical techniques such as liquid chromatography coupled to tandem mass spectrometry (LC–MS/MS) is necessary. In this review, the most relevant studies of the last years regarding the analysis of polyphenols in different matrices by comprehensive LC–MS/MS are discussed. Relevant steps such as extraction, sample purification, and chromatographic analysis methods are emphasized. In particular, the following methodological aspects are discussed: (a) the proper selection of the extraction technique, (b) the extraction and elution solvents, (c) the purification step, (d) the selection of both stationary and mobile phases for the chromatographic separation of compounds, and (e) the different conditions for mass spectrometry. Overall, this review presents the data from the most recent studies, in a comprehensive way, thus providing and simplifying the information of the great variety of works that exist in the literature on this wide topic.
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Affiliation(s)
- Olalla López-Fernández
- Centro Tecnológico de la Carne de Galicia, Rúa Galicia No 4, Parque Tecnológico de Galicia, San Cibrao das Viñas, 32900 Ourense, Spain; (O.L.-F.); (R.D.); (M.P.); (P.E.S.M.)
| | - Rubén Domínguez
- Centro Tecnológico de la Carne de Galicia, Rúa Galicia No 4, Parque Tecnológico de Galicia, San Cibrao das Viñas, 32900 Ourense, Spain; (O.L.-F.); (R.D.); (M.P.); (P.E.S.M.)
| | - Mirian Pateiro
- Centro Tecnológico de la Carne de Galicia, Rúa Galicia No 4, Parque Tecnológico de Galicia, San Cibrao das Viñas, 32900 Ourense, Spain; (O.L.-F.); (R.D.); (M.P.); (P.E.S.M.)
| | - Paulo E.S. Munekata
- Centro Tecnológico de la Carne de Galicia, Rúa Galicia No 4, Parque Tecnológico de Galicia, San Cibrao das Viñas, 32900 Ourense, Spain; (O.L.-F.); (R.D.); (M.P.); (P.E.S.M.)
| | - Gabriele Rocchetti
- Department for sustainable food process, Università Cattolica del Sacro Cuore, Via Emilia Parmense 84, 29122 Piacenza, Italy;
| | - José M. Lorenzo
- Centro Tecnológico de la Carne de Galicia, Rúa Galicia No 4, Parque Tecnológico de Galicia, San Cibrao das Viñas, 32900 Ourense, Spain; (O.L.-F.); (R.D.); (M.P.); (P.E.S.M.)
- Área de Tecnología de los Alimentos, Facultad de Ciencias de Ourense, Universidad de Vigo, 32004 Ourense, Spain
- Correspondence: ; Tel.: +34-988-548-277; Fax: +34-988-548-276
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10
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Lee HK, Kim K, Lee J, Lee J, Lee J, Kim S, Lee SE, Kim JH. Targeted toxicometabolomics of endosulfan sulfate in adult zebrafish (Danio rerio) using GC-MS/MS in multiple reaction monitoring mode. JOURNAL OF HAZARDOUS MATERIALS 2020; 389:122056. [PMID: 32000124 DOI: 10.1016/j.jhazmat.2020.122056] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2019] [Revised: 12/16/2019] [Accepted: 01/08/2020] [Indexed: 06/10/2023]
Abstract
Endosulfan sulfate is a major oxidative metabolite of the chlorinated insecticide endosulfan. In this study, a targeted metabolomics approach was used to investigate the toxic mechanisms of endosulfan sulfate in adult zebrafish using the multiple reaction monitoring mode of a GC-MS/MS. The LC50 of endosulfan sulfate in adult zebrafish was determined and then zebrafish were exposed to endosulfan sulfate at one-tenth the LC50 (0.1LC50) or the LC50 for 24 and 48 h. After exposure, the fish were extracted, derivatized and analyzed by GC-MS/MS for 379 metabolites to identify 170 metabolites. Three experimental groups (control, 0.1LC50 and LC50) were clearly separated in PLS-DA score plots. Based on the VIP, ANOVA, and fold change results, 40 metabolites were selected as biomarkers. Metabolic pathways associated with those metabolites were identified using MetaboAnalyst 4.0 as follows: aminoacyl-tRNA biosynthesis, valine/leucine/isoleucine biosynthesis, citrate cycle, glycerolipid metabolism, and arginine/proline metabolism. Gene expression studies confirmed the activation of citrate cycle and glycerolipids metabolism. MDA levels of the exposed group significantly increased in oxidative toxicity assay tests. Such significant perturbations of important metabolites within key biochemical pathways must result in biologically hazardous effects in zebrafish.
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Affiliation(s)
- Hwa-Kyung Lee
- Department of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, 08826, Republic of Korea
| | - Kyeongnam Kim
- School of Applied Biosciences, Kyungpook National University, Daegu, 41566, Republic of Korea
| | - Junghak Lee
- Department of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, 08826, Republic of Korea
| | - Jonghwa Lee
- Department of Veterinary and Animal Sciences, University of Massachusetts, Amherst, MA, 01003, USA
| | - Jiho Lee
- Environmental Medical Center, Korea Conformity Laboratories, Incheon, 21999, Republic of Korea
| | - Sooyeon Kim
- Gyeongnam Department of Environmental Toxicology and Chemistry, Korea Institute of Toxicology, Gyeongsangnam-do, 52834, Republic of Korea
| | - Sung-Eun Lee
- School of Applied Biosciences, Kyungpook National University, Daegu, 41566, Republic of Korea.
| | - Jeong-Han Kim
- Department of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, 08826, Republic of Korea.
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11
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Current trends in isotope‐coded derivatization liquid chromatographic‐mass spectrometric analyses with special emphasis on their biomedical application. Biomed Chromatogr 2020; 34:e4756. [DOI: 10.1002/bmc.4756] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2019] [Revised: 11/13/2019] [Accepted: 11/18/2019] [Indexed: 12/17/2022]
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12
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Promraksa B, Phetcharaburanin J, Namwat N, Techasen A, Boonsiri P, Loilome W. Evaluation of anticancer potential of Thai medicinal herb extracts against cholangiocarcinoma cell lines. PLoS One 2019; 14:e0216721. [PMID: 31120926 PMCID: PMC6532846 DOI: 10.1371/journal.pone.0216721] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2018] [Accepted: 04/26/2019] [Indexed: 01/01/2023] Open
Abstract
Although cholangiocarcinoma (CCA) has a low incidence globally, this is extremely high in Northeast Thailand. The lack of both early detection measures and effective therapeutic drugs is the major problem for the poor prognosis of CCA patients. Based on regional knowledge, it would be advantageous to search for effective natural phyto-products for the treatment of CCA. Cardiospermum halicacabum L., Gomphrena celosioides Mart. and Scoparia dulcis L., very well-known medicinal herbs in Asian countries, were selected for the investigation of inhibitory effects on CCA cells. Of the three different ethanolic extracts, S. dulcis L extract showed most inhibitory effects on cell growth of CCA cell lines KKU-100 and KKU-213, at percentages of 56.06 and 74.76, respectively, compared to the untreated group after treatment with 250 μg/mL of extracts for 72 hrs. At 400 and 500 μg/mL of the extracts, the inhibitory effect of KKU-213 was indicated by a significant increase in the BAX/Bcl-2 ratio and cell membrane permeability. Moreover, metabolic profiling-based screening employed in the current study revealed a significant positive association between the lignin compound and a decrease in CCA cell viability. Our study suggests, for the first time, that ESD has the ability to inhibit CCA cell growth through the induction of apoptosis.
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Affiliation(s)
- Bundit Promraksa
- Department of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand
- Cholangiocarcinoma Research Institute, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand
| | - Jutarop Phetcharaburanin
- Department of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand
- Cholangiocarcinoma Research Institute, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand
- Center of Excellence for Innovation in Chemistry, Mahidol University, Bangkok, Thailand
| | - Nisana Namwat
- Department of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand
- Cholangiocarcinoma Research Institute, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand
| | - Anchalee Techasen
- Cholangiocarcinoma Research Institute, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand
- Faculty of Associated Medical Science, Khon Kaen University, Khon Kaen, Thailand
| | - Patcharee Boonsiri
- Department of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand
| | - Watcharin Loilome
- Department of Biochemistry, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand
- Cholangiocarcinoma Research Institute, Faculty of Medicine, Khon Kaen University, Khon Kaen, Thailand
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13
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Herrero P, Rodríguez MÁ, Ras MR, Del Pino A, Arola L, Canela N. Metabolomics Analyses to Investigate the Role of Diet and Physical Training. Methods Mol Biol 2019; 1978:403-430. [PMID: 31119677 DOI: 10.1007/978-1-4939-9236-2_25] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
The metabolic and physiologic responses to healthy dietary habits and physical exercise have become an increasingly interesting research area, since equilibrated diet and regular physical activity are commonly recommended for their antioxidant capacity and for the prevention and treatment of several disorders as insulin resistance, dyslipidemia, obesity, and hypertension that may result in cardiovascular disease and type II diabetes.Nutritional and exercise-induced responses and the biological mechanisms that explain these associations have been tackled by several researchers using metabolomic approaches that have emerged as a powerful tool to comprehensively evaluate individual metabolic signatures, analyzing metabolome composition in serum, urine, stool, or tissue samples.The overview of the wide range of metabolites related to dietary and to physical training interventions reported from numerous human or animal studies endorses the complexity for assessing metabolic changes and compound identification, and a combination of targeted and non-targeted global profiling studies is recommended for increasing the understanding of nutrition and exercise metabolic mechanisms.The present protocol attempt to identify variations in human blood circulating metabolites with a multiplatform global analysis based on LC-MS, GC-MS, and NMR, combining targeted and untargeted strategies, to complete the holistic understanding of the serum metabolome.
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Affiliation(s)
- Pol Herrero
- Technological Joint Unit of Omic Sciences, EURECAT-Technological Center of Catalonia, Universitat Rovira i Virgili, Reus, Spain
| | - Miguel Ángel Rodríguez
- Technological Joint Unit of Omic Sciences, EURECAT-Technological Center of Catalonia, Universitat Rovira i Virgili, Reus, Spain
| | - Maria Rosa Ras
- Technological Joint Unit of Omic Sciences, EURECAT-Technological Center of Catalonia, Universitat Rovira i Virgili, Reus, Spain
| | - Antoni Del Pino
- Technological Joint Unit of Omic Sciences, EURECAT-Technological Center of Catalonia, Universitat Rovira i Virgili, Reus, Spain
| | - Lluís Arola
- Nutrigenomics Research Group, Biochemistry and Biotechnological Department, Universitat Rovira i Virgili, Tarragona, Spain.
- Biotechnological Area, EURECAT-Technological Center of Catalonia, Reus, Spain.
| | - Núria Canela
- Technological Joint Unit of Omic Sciences, EURECAT-Technological Center of Catalonia, Universitat Rovira i Virgili, Reus, Spain
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Antti H, Sellstedt M. Metabolic effects of an aspartate aminotransferase-inhibitor on two T-cell lines. PLoS One 2018; 13:e0208025. [PMID: 30532126 PMCID: PMC6285999 DOI: 10.1371/journal.pone.0208025] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2018] [Accepted: 11/11/2018] [Indexed: 12/29/2022] Open
Abstract
An emerging method to help elucidate the mode of action of experimental drugs is to use untargeted metabolomics of cell-systems. The interpretations of such screens are however complex and more examples with inhibitors of known targets are needed. Here two T-cell lines were treated with an inhibitor of aspartate aminotransferase and analyzed with untargeted GC-MS. The interpretation of the data was enhanced by the use of two different cell-lines and supports aspartate aminotransferase as a target. In addition, the data suggest an unexpected off-target effect on glutamate decarboxylase. The results exemplify the potency of metabolomics to provide insight into both mode of action and off-target effects of drug candidates.
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Affiliation(s)
- Henrik Antti
- Department of Chemistry, Umeå University, Umeå, Sweden
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15
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do Carmo MAV, Pressete CG, Marques MJ, Granato D, Azevedo L. Polyphenols as potential antiproliferative agents: scientific trends. Curr Opin Food Sci 2018. [DOI: 10.1016/j.cofs.2018.10.013] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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16
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Di Nunzio M, Picone G, Pasini F, Caboni MF, Gianotti A, Bordoni A, Capozzi F. Olive oil industry by-products. Effects of a polyphenol-rich extract on the metabolome and response to inflammation in cultured intestinal cell. Food Res Int 2018; 113:392-400. [DOI: 10.1016/j.foodres.2018.07.025] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2018] [Revised: 07/09/2018] [Accepted: 07/14/2018] [Indexed: 01/03/2023]
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