1
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Luo J, He C. Chemical protein synthesis enabled engineering of saccharide oxidative cleavage activity in artificial metalloenzymes. Int J Biol Macromol 2024; 256:128083. [PMID: 38000595 DOI: 10.1016/j.ijbiomac.2023.128083] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Revised: 10/18/2023] [Accepted: 11/12/2023] [Indexed: 11/26/2023]
Abstract
Chemical protein (semi-)synthesis is a powerful technique allowing the incorporation of unnatural functionalities at any desired protein site. Herein we describe a facile one-pot semi-synthetic strategy for the construction of a type 2 copper center in the active site of azurin, which is achieved by substitution of Met121 with unnatural amino acid residues bearing a strong ligand N,N-bis(pyridylmethyl)amine (DPA) to mimic the function of typical histidine brace-bearing copper monooxygenases, such as lytic polysaccharide monooxygenases (LPMOs) involved in polysaccharide breakdown. The semi-synthetic proteins were routinely obtained in over 10-mg scales to allow for spectroscopic measurements (UV-Vis, CD, and EPR), which provides structural evidences for the CuII-DPA-modified azurins. 4-nitrophenyl-β-D-glucopyranoside (PNPG) was used as a model substrate for the H2O2-driven oxidative cleavage reaction facilitated by semi-synthetic azurins, and the CuII-6 complex showed a highest activity (TTN 253). Interestingly, our semi-synthetic azurins were able to tolerate high H2O2 concentrations (up to 4000-fold of the enzyme), making them promising for practical applications. Collectively, we establish that chemical protein synthesis can be exploited as a reliable technology in affording large quantities of artificial metalloproteins to facilitate the transformation of challenging chemical reactions.
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Affiliation(s)
- Jindi Luo
- School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510640, PR China
| | - Chunmao He
- School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510640, PR China.
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2
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Liu Y, Harnden KA, Van Stappen C, Dikanov SA, Lu Y. A designed Copper Histidine-brace enzyme for oxidative depolymerization of polysaccharides as a model of lytic polysaccharide monooxygenase. Proc Natl Acad Sci U S A 2023; 120:e2308286120. [PMID: 37844252 PMCID: PMC10614608 DOI: 10.1073/pnas.2308286120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Accepted: 09/03/2023] [Indexed: 10/18/2023] Open
Abstract
The "Histidine-brace" (His-brace) copper-binding site, composed of Cu(His)2 with a backbone amine, is found in metalloproteins with diverse functions. A primary example is lytic polysaccharide monooxygenase (LPMO), a class of enzymes that catalyze the oxidative depolymerization of polysaccharides, providing not only an energy source for native microorganisms but also a route to more effective industrial biomass conversion. Despite its importance, how the Cu His-brace site performs this unique and challenging oxidative depolymerization reaction remains to be understood. To answer this question, we have designed a biosynthetic model of LPMO by incorporating the Cu His-brace motif into azurin, an electron transfer protein. Spectroscopic studies, including ultraviolet-visible (UV-Vis) absorption and electron paramagnetic resonance, confirm copper binding at the designed His-brace site. Moreover, the designed protein is catalytically active towards both cellulose and starch, the native substrates of LPMO, generating degraded oligosaccharides with multiturnovers by C1 oxidation. It also performs oxidative cleavage of the model substrate 4-nitrophenyl-D-glucopyranoside, achieving a turnover number ~9% of that of a native LPMO assayed under identical conditions. This work presents a rationally designed artificial metalloenzyme that acts as a structural and functional mimic of LPMO, which provides a promising system for understanding the role of the Cu His-brace site in LPMO activity and potential application in polysaccharide degradation.
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Affiliation(s)
- Yiwei Liu
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL61801
- Department of Chemistry, University of Texas at Austin, Austin, TX78712
| | - Kevin A. Harnden
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL61801
| | - Casey Van Stappen
- Department of Chemistry, University of Texas at Austin, Austin, TX78712
| | - Sergei A. Dikanov
- Department of Veterinary Clinical Medicine, University of Illinois at Urbana-Champaign, Urbana, IL61801
| | - Yi Lu
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, IL61801
- Department of Chemistry, University of Texas at Austin, Austin, TX78712
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3
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Enikeeva KR, Shamsieva AV, Kasimov AI, Litvinov IA, Lyubina AP, Voloshina AD, Musina EI, Karasik AA. Pyridyl-containing dialkylphosphine oxides and their chelate copper(ii) complexes. Inorganica Chim Acta 2022. [DOI: 10.1016/j.ica.2022.121286] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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4
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Lin H, Qin K, Dong Y, Li B. A newly-constructed bifunctional bacterial consortium for removing butyl xanthate and cadmium simultaneously from mineral processing wastewater: Experimental evaluation, degradation and biomineralization. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2022; 316:115304. [PMID: 35588671 DOI: 10.1016/j.jenvman.2022.115304] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2021] [Revised: 04/19/2022] [Accepted: 05/11/2022] [Indexed: 06/15/2023]
Abstract
Due to the technological limitations associated with beneficiation technology, large amounts of flotation reagents and heavy metals remain in mineral processing wastewater. Unfortunately, however, no treatment methods are available to mitigate the resulting pollution by them. In this study, a bacterial consortium SDMC (simultaneously degrade butyl xanthate and biomineralize cadmium) was constructed in an effort to simultaneously degrade butyl xanthate (BX) and biomineralize cadmium (Cd) by screening and domesticating two different bacterial species including Hypomicrobium and Sporosarcina. SDMC is efficient in removing the combined pollution due to BX and Cd with a 100% degradation rate for BX and 99% biomineralization rate for Cd within 4 h. Besides, SDMC can tolerate high concentrations of Fe(III) (0-40 mg/L). It has an excellent ability to utilize Fe(III) for enhanced removal of the combined pollutants. SDMC can effectively remove pollutants with a pH range of 6-9. Further, we discussed pathways for potential degradation and biomineralization: Cd(BX)2-Cd2+, BX-; BX--CS2, butyl perxanthate (BPX); Cd2+-(Ca0.67,Cd0.33)CO3. The removal of the combined pollutants primarily entails decomposition, degradation, and biomineralization, C-O bond cleavage, and microbially induced carbonate precipitation (MICP). SDMC is a simple, efficient, and eco-friendly bifunctional bacterial consortium for effective treatment of BX-Cd combined pollution in mineral processing wastewater.
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Affiliation(s)
- Hai Lin
- School of Energy and Environmental Engineering, University of Science and Technology Beijing, Beijing, 100083, China; Beijing Key Laboratory on Resource-oriented Treatment of Industrial Pollutants, Beijing, 100083, China
| | - Kangjia Qin
- School of Energy and Environmental Engineering, University of Science and Technology Beijing, Beijing, 100083, China; Beijing Key Laboratory on Resource-oriented Treatment of Industrial Pollutants, Beijing, 100083, China
| | - Yingbo Dong
- School of Energy and Environmental Engineering, University of Science and Technology Beijing, Beijing, 100083, China; Beijing Key Laboratory on Resource-oriented Treatment of Industrial Pollutants, Beijing, 100083, China.
| | - Bing Li
- School of Energy and Environmental Engineering, University of Science and Technology Beijing, Beijing, 100083, China; Beijing Key Laboratory on Resource-oriented Treatment of Industrial Pollutants, Beijing, 100083, China
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5
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Long L, Hu Y, Sun F, Gao W, Hao Z, Yin H. Advances in lytic polysaccharide monooxygenases with the cellulose-degrading auxiliary activity family 9 to facilitate cellulose degradation for biorefinery. Int J Biol Macromol 2022; 219:68-83. [PMID: 35931294 DOI: 10.1016/j.ijbiomac.2022.07.240] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2022] [Revised: 07/29/2022] [Accepted: 07/30/2022] [Indexed: 11/18/2022]
Abstract
One crucial step in processing the recalcitrant lignocellulosic biomass is the fast hydrolysis of natural cellulose to fermentable sugars that can be subsequently converted to biofuels and bio-based chemicals. Recent studies have shown that lytic polysaccharide monooxygenase (LPMOs) with auxiliary activity family 9 (AA9) are capable of efficiently depolymerizing the crystalline cellulose via regioselective oxidation reaction. Intriguingly, the catalysis by AA9 LPMOs requires reductant to provide electrons, and lignin and its phenolic derivatives can be oxidized, releasing reductant to activate the reaction. The activity of AA9 LPMOs can be enhanced by in-situ generation of H2O2 in the presence of O2. Although scientific understanding of these enzymes remains somewhat unknown or controversial, structure modifications on AA9 LPMOs through protein engineering have emerged in recent years, which are prerequisite for their extensive applications in the development of cellulase-mediated lignocellulosic biorefinery processes. In this review, we critically comment on advances in studies for AA9 LPMOs, i.e., characteristic of AA9 LPMOs catalysis, external electron donors to AA9 LPMOs, especially the role of the oxidization of lignin and its derivatives, and AA9 LPMOs protein engineering as well as their extensive applications in the bioprocessing of lignocellulosic biomass. Perspectives are also highlighted for addressing the challenges.
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Affiliation(s)
- Lingfeng Long
- Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi 214122, China
| | - Yun Hu
- Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi 214122, China
| | - Fubao Sun
- Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi 214122, China.
| | - Wa Gao
- Dalian Engineering Research Center for Carbohydrate Agricultural Preparations, Liaoning Provincial Key Laboratory of Carbohydrates, Dalian Institute of Chemical Physics, Chinese Academy of Sciences (CAS(, Dalian 116023, China
| | - Zhikui Hao
- Institute of Applied Biotechnology, School of Medicine and Pharmaceutical Engineering, Taizhou Vocational and Technical College, Taizhou 318000, China
| | - Heng Yin
- Dalian Engineering Research Center for Carbohydrate Agricultural Preparations, Liaoning Provincial Key Laboratory of Carbohydrates, Dalian Institute of Chemical Physics, Chinese Academy of Sciences (CAS(, Dalian 116023, China
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6
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Saikia J, Bhat VT, Potnuru LR, Redkar AS, Agarwal V, Ramakrishnan V. Minimalist De Novo Design of an Artificial Enzyme. ACS OMEGA 2022; 7:19131-19140. [PMID: 35721939 PMCID: PMC9202009 DOI: 10.1021/acsomega.1c07075] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Accepted: 05/16/2022] [Indexed: 06/15/2023]
Abstract
We employed a reductionist approach in designing the first heterochiral tripeptide that forms a robust heterogeneous short peptide catalyst similar to the "histidine brace" active site of lytic polysaccharide monooxygenases. The histidine brace is a conserved divalent copper ion-binding motif that comprises two histidine side chains and an amino group to create the T-shaped 3N geometry at the reaction center. The geometry parameters, including a large twist angle (73°) between the two imidazole rings of the model complex, are identical to those of native lytic polysaccharide monooxygenases (72.61°). The complex was synthesized and characterized as a structural and functional mimic of the histidine brace. UV-vis, vis-circular dichroism, Raman, and electron paramagnetic resonance spectroscopic analyses suggest a distorted square-pyramidal geometry with a 3N coordination at pH 7. Solution- and solid-state NMR results further confirm the 3N coordination in the copper center of the complex. The complex is pH-dependent and could catalyze the oxidation of benzyl alcohol in water to benzaldehyde with yields up to 82% in 3 h at pH 7 and above at 40 °C. The catalyst achieved 100% selectivity for benzaldehyde compared to conventional copper catalysis. The design of such a minimalist building block for functional soft materials with a pH switch can be a stepping stone in addressing needs for a cleaner and sustainable future catalyst.
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Affiliation(s)
- Jahnu Saikia
- Department
of Biosciences and Bioengineering, Indian
Institute of Technology Guwahati, Guwahati 781039, India
| | - Venugopal T. Bhat
- Organic
Synthesis and Catalysis Laboratory SRM Research Institute and Department
of Chemistry SRM Institute of Science and Technology, Kattankulathur 603203, Tamilnadu, India
| | - Lokeswara Rao Potnuru
- TIFR
Centre for Interdisciplinary Sciences, Tata
Institute of Fundamental Research Hyderabad, Hyderabad 500107, India
| | - Amay S. Redkar
- Department
of Biosciences and Bioengineering, Indian
Institute of Technology Guwahati, Guwahati 781039, India
| | - Vipin Agarwal
- TIFR
Centre for Interdisciplinary Sciences, Tata
Institute of Fundamental Research Hyderabad, Hyderabad 500107, India
| | - Vibin Ramakrishnan
- Department
of Biosciences and Bioengineering, Indian
Institute of Technology Guwahati, Guwahati 781039, India
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7
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Hassoon AA, Szorcsik A, Fülöp L, Papp ZI, May NV, Gajda T. Peptide-based chemical models for lytic polysaccharide monooxygenases. Dalton Trans 2022; 51:17241-17254. [DOI: 10.1039/d2dt02836k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The Cu(ii)–HPH-NH2 and Cu(ii)–HPHPY-NH2 systems were proved to be relevant functional models of LPMOs, even at neutral pH.
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Affiliation(s)
- Azza A. Hassoon
- Department of Inorganic and Analytical Chemistry, University of Szeged, Szeged, Hungary
- Chemistry Department, Faculty of Science, Mansoura University, Mansoura, 35516, Egypt
| | - Attila Szorcsik
- Department of Inorganic and Analytical Chemistry, University of Szeged, Szeged, Hungary
| | - Lívia Fülöp
- Institute of Medical Chemistry, University of Szeged, Szeged, Hungary
| | - Zita I. Papp
- Institute of Medical Chemistry, University of Szeged, Szeged, Hungary
| | - Nóra V. May
- Centre for Structural Science, Research Centre for Natural Sciences, Budapest, Hungary
| | - Tamás Gajda
- Department of Inorganic and Analytical Chemistry, University of Szeged, Szeged, Hungary
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8
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Gerz I, Jannuzzi SAV, Hylland KT, Negri C, Wragg DS, Øien‐Ødegaard S, Tilset M, Olsbye U, DeBeer S, Amedjkouh M. Structural Elucidation, Aggregation, and Dynamic Behaviour of N,N,N,N-Copper(I) Schiff Base Complexes in Solid and in Solution: A Combined NMR, X-ray Spectroscopic and Crystallographic Investigation. Eur J Inorg Chem 2021; 2021:4762-4775. [PMID: 35874966 PMCID: PMC9298233 DOI: 10.1002/ejic.202100722] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2021] [Revised: 09/22/2021] [Indexed: 12/30/2022]
Abstract
A series of Cu(I) complexes of bidentate or tetradentate Schiff base ligands bearing either 1-H-imidazole or pyridine moieties were synthesized. The complexes were studied by a combination of NMR and X-ray spectroscopic techniques. The differences between the imidazole- and pyridine-based ligands were examined by 1H, 13C and 15N NMR spectroscopy. The magnitude of the 15Nimine coordination shifts was found to be strongly affected by the nature of the heterocycle in the complexes. These trends showed good correlation with the obtained Cu-Nimine bond lengths from single-crystal X-ray diffraction measurements. Variable-temperature NMR experiments, in combination with diffusion ordered spectroscopy (DOSY) revealed that one of the complexes underwent a temperature-dependent interconversion between a monomer, a dimer and a higher aggregate. The complexes bearing tetradentate imidazole ligands were further studied using Cu K-edge XAS and VtC XES, where DFT-assisted assignment of spectral features suggested that these complexes may form polynuclear oligomers in solid state. Additionally, the Cu(II) analogue of one of the complexes was incorporated into a metal-organic framework (MOF) as a way to obtain discrete, mononuclear complexes in the solid state.
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Affiliation(s)
- Isabelle Gerz
- Department of ChemistryUniversity of OsloP. O. Box 1033 Blindern0315OsloNorway
- Centre for Materials Science and NanotechnologyUniversity of OsloP.O. Box 1126 Blindern0316OsloNorway
| | | | - Knut T. Hylland
- Department of ChemistryUniversity of OsloP. O. Box 1033 Blindern0315OsloNorway
- Centre for Materials Science and NanotechnologyUniversity of OsloP.O. Box 1126 Blindern0316OsloNorway
| | - Chiara Negri
- Department of ChemistryUniversity of OsloP. O. Box 1033 Blindern0315OsloNorway
- Centre for Materials Science and NanotechnologyUniversity of OsloP.O. Box 1126 Blindern0316OsloNorway
| | - David S. Wragg
- Department of ChemistryUniversity of OsloP. O. Box 1033 Blindern0315OsloNorway
- Centre for Materials Science and NanotechnologyUniversity of OsloP.O. Box 1126 Blindern0316OsloNorway
| | - Sigurd Øien‐Ødegaard
- Department of ChemistryUniversity of OsloP. O. Box 1033 Blindern0315OsloNorway
- Centre for Materials Science and NanotechnologyUniversity of OsloP.O. Box 1126 Blindern0316OsloNorway
| | - Mats Tilset
- Department of ChemistryUniversity of OsloP. O. Box 1033 Blindern0315OsloNorway
- Centre for Materials Science and NanotechnologyUniversity of OsloP.O. Box 1126 Blindern0316OsloNorway
| | - Unni Olsbye
- Department of ChemistryUniversity of OsloP. O. Box 1033 Blindern0315OsloNorway
- Centre for Materials Science and NanotechnologyUniversity of OsloP.O. Box 1126 Blindern0316OsloNorway
| | - Serena DeBeer
- Department of Inorganic SpectroscopyMax Planck Institute for Chemical Energy ConversionStiftstraße 34–3645470Mülheim an der RuhrGermany
| | - Mohamed Amedjkouh
- Department of ChemistryUniversity of OsloP. O. Box 1033 Blindern0315OsloNorway
- Centre for Materials Science and NanotechnologyUniversity of OsloP.O. Box 1126 Blindern0316OsloNorway
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9
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Castillo I, Torres‐Flores AP, Abad‐Aguilar DF, Berlanga‐Vázquez A, Orio M, Martínez‐Otero D. Cellulose Depolymerization with LPMO‐inspired Cu Complexes. ChemCatChem 2021. [DOI: 10.1002/cctc.202101169] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Ivan Castillo
- Instituto de Química Universidad Nacional Autónoma de México Circuito Exterior Cu, 04510 México
| | - Andrea P. Torres‐Flores
- Instituto de Química Universidad Nacional Autónoma de México Circuito Exterior Cu, 04510 México
| | - Diego F. Abad‐Aguilar
- Instituto de Química Universidad Nacional Autónoma de México Circuito Exterior Cu, 04510 México
| | | | - Maylis Orio
- Aix Marseille Université CNRS, Centrale Marseille, iSm2 13397 Marseille France
| | - Diego Martínez‐Otero
- Centro Conjunto de Investigación en Química Sustentable UAEM-UNAM Carretera Toluca-Atlacomulco km 14.5 Toluca 50200 Estado de México México
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11
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Muthuramalingam S, Velusamy M, Mayilmurugan R. Fixation of atmospheric CO 2 as C1-feedstock by nickel(ii) complexes. Dalton Trans 2021; 50:7984-7994. [PMID: 34018501 DOI: 10.1039/d0dt03887c] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
The development of molecular catalysts for the activation and conversion of atmospheric carbon dioxide (CO2) into a value-added product is a great challenge. A series of nickel(ii) complexes, [Ni(L)(CH3CN)3](BPh4)2, 1-4 of diazepane based ligands, 4-methyl-1-[(pyridin-2-yl-methyl)]-1,4-diazepane (L1), 4-methyl-1-[2-(pyridine-2-yl)ethyl]-1,4-diazepane (L2), 4-methyl-1-[(quinoline-2-yl)-methyl]-1,4-diazepane (L3) and 1-[(4-methoxy-3,5-dimethyl-pyridin-2-yl)methyl]-4-methyl-1,4-diazepane (L4), have been synthesized and characterized as catalysts for the activation of atmospheric CO2. The single-crystal X-ray structure of 1 shows a distorted octahedral geometry with a cis-β configuration around the NiN6 coordination sphere. All the complexes are used as catalysts for the conversion of atmospheric CO2 and epoxides into cyclic carbonates at 1 atmosphere (atm) pressure and in the presence of Et3N. Catalyst 4 was found to be the most efficient catalyst and showed a 31% formation of cyclic carbonates with a TON of 620 under 1 atm air as the CO2 source. This yield was enhanced to 94% with a TON of 1880 under 1 atm pure CO2 gas and it is the highest catalytic efficiency known for nickel(ii)-based catalysts. Catalyst 4 enabled the transformation of a wide range of epoxides (eight examples) into corresponding cyclic carbonates with excellent selectivity (>99%) and yields of 59-94% and 11-31% under pure CO2 and atmospheric CO2, respectively. The catalytic efficiency is strongly influenced by the electronic nature of the complexes. The CO2 fixation reactions without an epoxide substrate led to the formation of the carbonate bridged dinuclear nickel(ii) complexes [(LNiII)2CO3](BPh4)21a-4a, which are speculated as catalytically active intermediates. The formation of these species was accompanied by the formation of new absorption bands around 592-681 nm and was further confirmed by the ESI-MS and IR spectral studies. The molecular structures of these carbonate-bridged key intermediates were determined by X-ray analysis. The structures contain two Ni2+-centers bridged via a carbonate ion that originated from CO2. Distorted square pyramidal geometries are adopted around each Ni(ii) center. All these results support that CO2 fixation reactions occur via CO2-bound nickel key intermediates.
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Affiliation(s)
- Sethuraman Muthuramalingam
- Bioinorganic Chemistry Laboratory/Physical Chemistry, School of Chemistry, Madurai Kamaraj University, Madurai-625021, India.
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12
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Sohtun WP, Muthuramalingam S, Sankaralingam M, Velusamy M, Mayilmurugan R. Copper(II) complexes of tripodal ligand scaffold (N 3O) as functional models for phenoxazinone synthase. J Inorg Biochem 2020; 216:111313. [PMID: 33277049 DOI: 10.1016/j.jinorgbio.2020.111313] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2020] [Revised: 11/12/2020] [Accepted: 11/12/2020] [Indexed: 11/30/2022]
Abstract
The copper(II) complexes [Cu(L)NO3] (1-9) of newer N3O ligands (L1-L9) have been synthesized and characterized. The molecular structure of 1, 4, and 7 exhibited nearly a perfect square pyramidal geometry (τ, 0.04-0.11). The Cu-OPhenolate bonds (~ 1.91 Å) are shorter than the Cu-N bonds (~ 2.06 Å) due to the stronger coordination of anionic phenolate oxygen. The Cu(II)/Cu(I) redox potentials of 1-9 appeared around -0.102 to -0.428 V versus Ag/Ag+ in water. The electronic spectra of the complexes showed the d-d transitions around 643-735 nm and axial EPR parameter (g||, 2.243-2.270; A||, 164-179 × 10-4 cm-1) that corresponds to square pyramidal geometry. The bonding parameters α2, 0.760-0.825; β2, 0.761-0.994; γ2, 0.504-0.856 and K||, 0.698-0.954 and K⊥, 0.383-0.820 calculated from EPR spectra and energies of d-d transitions. The complexes catalyzed the conversion of substrate 2-aminophenol into 2-aminophenoxazine-3-one using molecular oxygen in the water and exhibited the yields of 41-61%. The formation of the product is accomplished by the appearance of a new absorption band at 430 nm and the rates of formation were calculated as 6.98-15.65 × 10-3 s-1 in water. The reaction follows Michaelis-Menten enzymatic reaction kinetics with turnover numbers (kcat) 9.11 × 105 h-1 for 1 and 4.66 × 105 h-1 for 9 in water. The spectral, redox and kinetic studies were performed in water to mimic the enzymatic oxidation reaction conditions.
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Affiliation(s)
- Winaki P Sohtun
- Department of Chemistry, North Eastern Hill University, Shillong 793022, India
| | - Sethuraman Muthuramalingam
- Bioinorganic Chemistry Laboratory/Physical Chemistry, School of Chemistry, Madurai Kamaraj University, Madurai 625 021, Tamil Nadu, India
| | - Muniyandi Sankaralingam
- Bioinspired & Biomimetic Inorganic Chemistry Lab, Department of Chemistry, National Institute of Technology Calicut, Kozhikode, Kerala 673601, India
| | - Marappan Velusamy
- Department of Chemistry, North Eastern Hill University, Shillong 793022, India.
| | - Ramasamy Mayilmurugan
- Bioinorganic Chemistry Laboratory/Physical Chemistry, School of Chemistry, Madurai Kamaraj University, Madurai 625 021, Tamil Nadu, India.
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13
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Muthuramalingam S, Anandababu K, Velusamy M, Mayilmurugan R. Benzene Hydroxylation by Bioinspired Copper(II) Complexes: Coordination Geometry versus Reactivity. Inorg Chem 2020; 59:5918-5928. [DOI: 10.1021/acs.inorgchem.9b03676] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Sethuraman Muthuramalingam
- Bioinorganic Chemistry Laboratory/Physical Chemistry, School of Chemistry, Madurai Kamaraj University, Madurai 625021, India
| | - Karunanithi Anandababu
- Bioinorganic Chemistry Laboratory/Physical Chemistry, School of Chemistry, Madurai Kamaraj University, Madurai 625021, India
| | - Marappan Velusamy
- Department of Chemistry, North Eastern Hill University, Shillong 793022, India
| | - Ramasamy Mayilmurugan
- Bioinorganic Chemistry Laboratory/Physical Chemistry, School of Chemistry, Madurai Kamaraj University, Madurai 625021, India
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14
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Fukatsu A, Morimoto Y, Sugimoto H, Itoh S. Modelling a ‘histidine brace’ motif in mononuclear copper monooxygenases. Chem Commun (Camb) 2020; 56:5123-5126. [DOI: 10.1039/d0cc01392g] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
A mononuclear copper complex bearing a ‘histidine brace’ is synthesised and characterised as an active-site model of mononuclear copper monooxygenases such as lytic polysaccharide monooxygenases (LPMOs) and particulate methane monooxygenase (pMMO).
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Affiliation(s)
- Arisa Fukatsu
- Department of Material and Life Science
- Division of Advanced Science and Biotechnology
- Graduate School of Engineering
- Osaka University
- Osaka 565-0871
| | - Yuma Morimoto
- Department of Material and Life Science
- Division of Advanced Science and Biotechnology
- Graduate School of Engineering
- Osaka University
- Osaka 565-0871
| | - Hideki Sugimoto
- Department of Material and Life Science
- Division of Advanced Science and Biotechnology
- Graduate School of Engineering
- Osaka University
- Osaka 565-0871
| | - Shinobu Itoh
- Department of Material and Life Science
- Division of Advanced Science and Biotechnology
- Graduate School of Engineering
- Osaka University
- Osaka 565-0871
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Neira A, Martínez-Alanis PR, Aullón G, Flores-Alamo M, Zerón P, Company A, Chen J, Kasper JB, Browne WR, Nordlander E, Castillo I. Oxidative Cleavage of Cellobiose by Lytic Polysaccharide Monooxygenase (LPMO)-Inspired Copper Complexes. ACS OMEGA 2019; 4:10729-10740. [PMID: 31460171 PMCID: PMC6648734 DOI: 10.1021/acsomega.9b00785] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/21/2019] [Accepted: 06/06/2019] [Indexed: 06/10/2023]
Abstract
The potentially tridentate ligand bis[(1-methyl-2-benzimidazolyl)ethyl]amine (2BB) was employed to prepare copper complexes [(2BB)CuI]OTf and [(2BB)CuII(H2O)2](OTf)2 as bioinspired models of lytic polysaccharide copper-dependent monooxygenase (LPMO) enzymes. Solid-state characterization of [(2BB)CuI]OTf revealed a Cu(I) center with a T-shaped coordination environment and metric parameters in the range of those observed in reduced LPMOs. Solution characterization of [(2BB)CuII(H2O)2](OTf)2 indicates that [(2BB)CuII(H2O)2]2+ is the main species from pH 4 to 7.5; above pH 7.5, the hydroxo-bridged species [{(2BB)CuII(H2O) x }2(μ-OH)2]2+ is also present, on the basis of cyclic voltammetry and mass spectrometry. These observations imply that deprotonation of the central amine of Cu(II)-coordinated 2BB is precluded, and by extension, amine deprotonation in the histidine brace of LPMOs appears unlikely at neutral pH. The complexes [(2BB)CuI]OTf and [(2BB)CuII(H2O)2](OTf)2 act as precursors for the oxidative degradation of cellobiose as a cellulose model substrate. Spectroscopic and reactivity studies indicate that a dicopper(II) side-on peroxide complex generated from [(2BB)CuI]OTf/O2 or [(2BB)CuII(H2O)2](OTf)2/H2O2/NEt3 oxidizes cellobiose both in acetonitrile and aqueous phosphate buffer solutions, as evidenced from product analysis by high-performance liquid chromatography-mass spectrometry. The mixture of [(2BB)CuII(H2O)2](OTf)2/H2O2/NEt3 results in more extensive cellobiose degradation. Likewise, the use of both [(2BB)CuI]OTf and [(2BB)CuII(H2O)2](OTf)2 with KO2 afforded cellobiose oxidation products. In all cases, a common Cu(II) complex formulated as [(2BB)CuII(OH)(H2O)]+ was detected by mass spectrometry as the final form of the complex.
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Affiliation(s)
- Andrea.
C. Neira
- Instituto
de Química and Facultad de Química, División
de Estudios de Posgrado, Universidad Nacional
Autónoma de México, Circuito Exterior, CU, 04510 Ciudad de
México, México
| | - Paulina R. Martínez-Alanis
- Departament
de Química Inorgànica i Orgànica and Institut
de Química Teòrica i Computacional, Universitat de Barcelona, Martí i Franquès 1-11, 08028 Barcelona, Spain
| | - Gabriel Aullón
- Departament
de Química Inorgànica i Orgànica and Institut
de Química Teòrica i Computacional, Universitat de Barcelona, Martí i Franquès 1-11, 08028 Barcelona, Spain
| | - Marcos Flores-Alamo
- Instituto
de Química and Facultad de Química, División
de Estudios de Posgrado, Universidad Nacional
Autónoma de México, Circuito Exterior, CU, 04510 Ciudad de
México, México
| | - Paulino Zerón
- Instituto
de Química and Facultad de Química, División
de Estudios de Posgrado, Universidad Nacional
Autónoma de México, Circuito Exterior, CU, 04510 Ciudad de
México, México
| | - Anna Company
- Institut
de Química Computacional i Catàlisi (IQCC), Departament
de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003 Girona, Catalonia, Spain
| | - Juan Chen
- Molecular
Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of
Science and Health, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Johann B. Kasper
- Molecular
Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of
Science and Health, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Wesley R. Browne
- Molecular
Inorganic Chemistry, Stratingh Institute for Chemistry, Faculty of
Science and Health, University of Groningen, Nijenborgh 4, 9747AG Groningen, The Netherlands
| | - Ebbe Nordlander
- Chemical
Physics, Department of Chemistry, Lund University, Box 124, SE-221 00 Lund, Sweden
| | - Ivan Castillo
- Instituto
de Química and Facultad de Química, División
de Estudios de Posgrado, Universidad Nacional
Autónoma de México, Circuito Exterior, CU, 04510 Ciudad de
México, México
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