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Elsheref M, Messina L, Tarr MA. Photochemistry of oil in marine systems: developments since the Deepwater Horizon spill. ENVIRONMENTAL SCIENCE. PROCESSES & IMPACTS 2023; 25:1878-1908. [PMID: 37881013 DOI: 10.1039/d3em00248a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/27/2023]
Abstract
Oil spills represent a major source of negative environmental impacts in marine systems. Despite many decades of research on oil spill behavior, photochemistry was neglected as a major factor in the fate of oil spilled in marine systems. Subsequent to the Deepwater Horizon oil spill, numerous studies using varied approaches have demonstrated the importance of photochemistry, including short-term impacts (hours to days) that were previously unrecognized. These studies have demonstrated the importance of photochemistry in the overall oil transformation after a spill and more specifically the impacts on emulsification, oxygenation, and microbial interactions. In addition to new perspectives, advances in analytical approaches have allowed an improved understanding of oil photochemistry after maritime spill. Although the literature on the Deepwater Horizon spill is extensive, this review focuses only on studies relevant to the advances in oil photochemistry understanding since the Deepwater Horizon spill.
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Affiliation(s)
- Mohamed Elsheref
- Department of Chemistry, University of New Orleans, New Orleans, LA 70148, USA.
| | - Lena Messina
- Department of Chemistry, University of New Orleans, New Orleans, LA 70148, USA.
| | - Matthew A Tarr
- Department of Chemistry, University of New Orleans, New Orleans, LA 70148, USA.
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Carregosa JC, Castiblanco JEB, Santos TM, Prata PS, Santos JM, Wisniewski A. Assessment of the effect of short-term weathering on the molecular-level chemical composition of crude oils in contact with aquatic environments. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:95738-95757. [PMID: 37556063 DOI: 10.1007/s11356-023-29148-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Accepted: 07/29/2023] [Indexed: 08/10/2023]
Abstract
Multiple studies have focused on the effect of long-term weathering processes on oils after spill events, without considering the chemical compositional changes occurring shortly after the release of oil into the environment. Therefore, the present study provides a broad chemical characterization for understanding of the changes occurring in the chemical compositions of intermediate (°API = 27.0) and heavy (°API = 20.9) oils from the Sergipe-Alagoas basin submitted to two simulated situations, one under marine conditions and the other in a riverine environment. Samples of the oils were collected during the first 72 h of contact with the simulated environments, followed by evaluation of their chemical compositions. SARA fractionation was used to isolate the resins, which were characterized at the molecular level by UHRMS. The evaporation process was highlighted, with the GC-FID chromatographic profiles showing the disappearance of compounds from n-C10 until n-C16, as well as changes in the weathering indexes and pristane + n-C17/phytane + n-C18 ratios for the crude oils submitted to the riverine conditions. Analysis of the resins fraction showed that basic polar compounds underwent little or no alterations during the early stages of weathering. The marine environment was shown to be much less oxidative than the riverine environment. For both environments, a feature highlighted was an increase of acidic oxygenated compounds with the increase of weathering, especially for the crude oil with °API = 27.0.
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Affiliation(s)
- Jhonattas Carvalho Carregosa
- Petroleum and Energy from Biomass Research Group (PEB), Department of Chemistry, Federal University of Sergipe, Jardim Rosa Elze, São Cristóvão, SE, 49107-230, Brazil
| | - Julian Eduardo Ballén Castiblanco
- Petroleum and Energy from Biomass Research Group (PEB), Department of Chemistry, Federal University of Sergipe, Jardim Rosa Elze, São Cristóvão, SE, 49107-230, Brazil
| | - Tarcísio Martins Santos
- Petroleum and Energy from Biomass Research Group (PEB), Department of Chemistry, Federal University of Sergipe, Jardim Rosa Elze, São Cristóvão, SE, 49107-230, Brazil
| | - Paloma Santana Prata
- Petroleum and Energy from Biomass Research Group (PEB), Department of Chemistry, Federal University of Sergipe, Jardim Rosa Elze, São Cristóvão, SE, 49107-230, Brazil
| | - Jandyson Machado Santos
- Department of Chemistry, Federal Rural University of Pernambuco, Dois Irmãos, Recife, PE, 52171-900, Brazil
| | - Alberto Wisniewski
- Petroleum and Energy from Biomass Research Group (PEB), Department of Chemistry, Federal University of Sergipe, Jardim Rosa Elze, São Cristóvão, SE, 49107-230, Brazil.
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Damont A, Legrand A, Cao C, Fenaille F, Tabet JC. Hydrogen/deuterium exchange mass spectrometry in the world of small molecules. MASS SPECTROMETRY REVIEWS 2023; 42:1300-1331. [PMID: 34859466 DOI: 10.1002/mas.21765] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Revised: 11/19/2021] [Accepted: 11/19/2021] [Indexed: 06/07/2023]
Abstract
The combined use of hydrogen/deuterium exchange (HDX) and mass spectrometry (MS), referred to as HDX-MS, is a powerful tool for exploring molecular edifices and has been used for over 60 years. Initially for structural and mechanistic investigation of low-molecular weight organic compounds, then to study protein structure and dynamics, then, the craze to study small molecules by HDX-MS accelerated and has not stopped yet. The purpose of this review is to present its different facets with particular emphasis on recent developments and applications. Reversible H/D exchanges of mobilizable protons as well as stable exchanges of non-labile hydrogen are considered whether they are taking place in solution or in the gas phase, or enzymatically in a biological media. Some fundamental principles are restated, especially for gas-phase processes, and an overview of recent applications, ranging from identification to quantification through the study of metabolic pathways, is given.
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Affiliation(s)
- Annelaure Damont
- Département Médicaments et Technologies pour la Santé (DMTS), MetaboHUB, Université Paris-Saclay, CEA, INRAE, Gif-sur-Yvette, France
| | - Anaïs Legrand
- Département Médicaments et Technologies pour la Santé (DMTS), MetaboHUB, Université Paris-Saclay, CEA, INRAE, Gif-sur-Yvette, France
| | - Chenqin Cao
- Département Médicaments et Technologies pour la Santé (DMTS), MetaboHUB, Université Paris-Saclay, CEA, INRAE, Gif-sur-Yvette, France
| | - François Fenaille
- Département Médicaments et Technologies pour la Santé (DMTS), MetaboHUB, Université Paris-Saclay, CEA, INRAE, Gif-sur-Yvette, France
| | - Jean-Claude Tabet
- Département Médicaments et Technologies pour la Santé (DMTS), MetaboHUB, Université Paris-Saclay, CEA, INRAE, Gif-sur-Yvette, France
- Faculté des Sciences et de l'Ingénierie, Institut Parisien de Chimie Moléculaire (IPCM), Sorbonne Université, Paris, France
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Acter T, Lee S, Uddin N, Mow KM, Kim S. Characterization of petroleum‐related natural organic matter by ultrahigh‐resolution mass spectrometry. B KOREAN CHEM SOC 2022. [DOI: 10.1002/bkcs.12662] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Thamina Acter
- Department of Mathematical and Physical Sciences East West University Dhaka Bangladesh
| | - Seulgidaun Lee
- Department of Chemistry Kyungpook National University Daegu Republic of Korea
| | - Nizam Uddin
- Department of Nutrition and Food Engineering, Faculty of Allied Health Science Daffodil International University Dhaka Bangladesh
| | - Kamarum Monira Mow
- Department of Computer Science and Engineering East West University Dhaka Bangladesh
| | - Sunghwan Kim
- Department of Chemistry Kyungpook National University Daegu Republic of Korea
- Mass Spectrometry Based Convergence Research Institute Kyungpook National University Daegu Republic of Korea
- Green‐Nano Materials Research Center, Kyungpook National University Daegu Republic of Korea
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Next Challenges for the Comprehensive Molecular Characterization of Complex Organic Mixtures in the Field of Sustainable Energy. Molecules 2022; 27:molecules27248889. [PMID: 36558021 PMCID: PMC9786309 DOI: 10.3390/molecules27248889] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2022] [Revised: 12/06/2022] [Accepted: 12/08/2022] [Indexed: 12/23/2022] Open
Abstract
The conversion of lignocellulosic biomass by pyrolysis or hydrothermal liquefaction gives access to a wide variety of molecules that can be used as fuel or as building blocks in the chemical industry. For such purposes, it is necessary to obtain their detailed chemical composition to adapt the conversion process, including the upgrading steps. Petroleomics has emerged as an integral approach to cover a missing link in the investigation bio-oils and linked products. It relies on ultra-high-resolution mass spectrometry to attempt to unravel the contribution of many compounds in complex samples by a non-targeted approach. The most recent developments in petroleomics partially alter the discriminating nature of the non-targeted analyses. However, a peak referring to one chemical formula possibly hides a forest of isomeric compounds, which may present a large chemical diversity concerning the nature of the chemical functions. This identification of chemical functions is essential in the context of the upgrading of bio-oils. The latest developments dedicated to this analytical challenge will be reviewed and discussed, particularly by integrating ion source features and incorporating new steps in the analytical workflow. The representativeness of the data obtained by the petroleomic approach is still an important issue.
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Yang Z, Yang C, Zhang G, Shah K, Chen B, Hollebone BP, Jackman P, Beaulac V. Effects of asphaltenes on the photolytic and toxic behavior of bitumen and conventional oil products on saltwater. JOURNAL OF HAZARDOUS MATERIALS 2022; 436:129137. [PMID: 35594666 DOI: 10.1016/j.jhazmat.2022.129137] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2022] [Revised: 04/23/2022] [Accepted: 05/09/2022] [Indexed: 06/15/2023]
Abstract
The effects of asphaltenes on the photolytic and toxic behavior of petroleum oil on seawater was investigated by exposing five original oils and their maltenes to solar irradiation for seven days. Polycyclic aromatic hydrocarbons (PAHs) experienced the fastest photo-oxidation, but negligible photolytic loss was observed for most normal alkanes and all the petroleum biomarkers from tri-cyclic to pentyl-cyclic terpanes in the test total oil and maltenes. The removal of most PAHs from some maltenes was greater than the corresponding total oils. Deasphalting process did not affect the characteristics of naphthenic acid fraction components (NAFCs) in all control samples. In all test oils, solar irradiation formed abundant NAFCs, in particular those only containing oxygen as the heteroatoms (Oo species). The formed Oo species were abundant in congeners having highly saturated congeners, and shifted to a lighter carbon number after exposed. Deasphalting process significantly enhanced the formation of Oo species (o from 2 to 4) for all test oils, in particular for the Cold Lake Blend and Bunker C. The toxicity of exposed maltenes was generally higher than the exposed total oil for most oils, suggesting the aqueous toxicity level was positively related to the formed NAFC intermediates.
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Affiliation(s)
- Zeyu Yang
- Emergencies Science and Technology Section Science and Technology Branch, Environment and Climate Change Canada, Ottawa, ON, Canada.
| | - Chun Yang
- Emergencies Science and Technology Section Science and Technology Branch, Environment and Climate Change Canada, Ottawa, ON, Canada
| | - Gong Zhang
- Emergencies Science and Technology Section Science and Technology Branch, Environment and Climate Change Canada, Ottawa, ON, Canada
| | - Keval Shah
- Emergencies Science and Technology Section Science and Technology Branch, Environment and Climate Change Canada, Ottawa, ON, Canada
| | - Brian Chen
- Emergencies Science and Technology Section Science and Technology Branch, Environment and Climate Change Canada, Ottawa, ON, Canada
| | - Bruce P Hollebone
- Emergencies Science and Technology Section Science and Technology Branch, Environment and Climate Change Canada, Ottawa, ON, Canada
| | - Paula Jackman
- Atlantic Laboratory for Environmental Testing Science and Technology Branch, Environment and Climate Change Canada, Moncton, NB, Canada
| | - Vanessa Beaulac
- Emergencies Science and Technology Section Science and Technology Branch, Environment and Climate Change Canada, Ottawa, ON, Canada
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Kim S, Kim D, Jung MJ, Kim S. Analysis of environmental organic matters by Ultrahigh-Resolution mass spectrometry-A review on the development of analytical methods. MASS SPECTROMETRY REVIEWS 2022; 41:352-369. [PMID: 33491249 DOI: 10.1002/mas.21684] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2020] [Revised: 09/10/2020] [Accepted: 09/10/2020] [Indexed: 06/12/2023]
Abstract
Owing to the increasing environmental and climate changes globally, there is an increasing interest in the molecular-level understanding of environmental organic compound mixtures, that is, the pursuit of complete and detailed knowledge of the chemical compositions and related chemical reactions. Environmental organic molecule mixtures, including those in air, soil, rivers, and oceans, have extremely complex and heterogeneous chemical compositions. For their analyses, ultrahigh-resolution and sub-ppb level mass accuracy, achievable using Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR MS), are important. FT-ICR MS has been successfully used to analyze complex environmental organic molecule mixtures such as natural, soil, particulate, and dissolved organic matter. Despite its success, many limitations still need to be overcome. Sample preparation, ionization, structural identification, chromatographic separation, and data interpretation are some key areas that have been the focus of numerous studies. This review describes key developments in analytical techniques in these areas to aid researchers seeking to start or continue investigations for the molecular-level understanding of environmental organic compound mixtures.
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Affiliation(s)
- Sungjune Kim
- Department of Chemistry, Kyungpook National University, Daegu, Korea
| | - Donghwi Kim
- Oil and POPs Research Group, Korea Institute of Ocean Science and Technology, Geoje, Korea
| | - Maeng-Joon Jung
- Department of Chemistry, Kyungpook National University, Daegu, Korea
| | - Sunghwan Kim
- Department of Chemistry, Kyungpook National University, Daegu, Korea
- Mass Spectrometry Convergence Research Center and Green-Nano Materials Research Center, Daegu, Korea
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Acter T, Solihat NN, Kim S, Uddin N, Mustafa AI, Shamsuddin SM, Kim S. Application of silver-assisted laser desorption ionization ultrahigh-resolution mass spectrometry for the speciation of sulfur compounds. Anal Bioanal Chem 2019; 412:243-255. [DOI: 10.1007/s00216-019-02272-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2019] [Revised: 10/31/2019] [Accepted: 11/08/2019] [Indexed: 01/06/2023]
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9
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Kim D, Jung JH, Ha SY, An JG, Shankar R, Kwon JH, Yim UH, Kim SH. Molecular level determination of water accommodated fraction with embryonic developmental toxicity generated by photooxidation of spilled oil. CHEMOSPHERE 2019; 237:124346. [PMID: 31376702 DOI: 10.1016/j.chemosphere.2019.124346] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2019] [Revised: 07/03/2019] [Accepted: 07/09/2019] [Indexed: 06/10/2023]
Abstract
In this study, developmental toxicity was increased as the oil was further degraded under natural sunlight. Detailed chemical composition of the degraded oils was examined by use of gas chromatography (GC) and (-) electrospray ionization ultrahigh resolution mass spectrometry (UHR-MS). Baseline toxicities were estimated based on chemical activities of polycyclic aromatic hydrocarbons, and it was obvious that the predicted chemical activities can not explain increased toxicity alone. However, the ultrahigh resolution mass spectral abundance of polar compounds including O3 and O4 class compounds was significantly increased as the photodegradation proceeded. Further examination of double bond equivalence values of the compounds showed that polar compounds with both non-aromatic and aromatic polar structures were increased. Statistical analysis indicates that the increased toxicity can be well explained by the increased polar compounds. Therefore, the oxygenated compounds identified in this study can play an important role in toxicity of degraded oils.
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Affiliation(s)
- Donghwi Kim
- Department of Chemistry, Kyungpook National University, Daegu, 41566, Republic of Korea; Analytical Research Center, Korea Institute of Toxicology, Daejeon, 34114, Republic of Korea
| | - Jee-Hyun Jung
- Oil and POPs Research Group, Korea Institute of Ocean Science and Technology, Geoje, 53201, Republic of Korea; Marine Environmental Science Major, Korea University of Science and Technology, Geoje, 53201, Republic of Korea
| | - Sung Yong Ha
- Oil and POPs Research Group, Korea Institute of Ocean Science and Technology, Geoje, 53201, Republic of Korea
| | - Joon Geon An
- Oil and POPs Research Group, Korea Institute of Ocean Science and Technology, Geoje, 53201, Republic of Korea
| | - Ravi Shankar
- Oil and POPs Research Group, Korea Institute of Ocean Science and Technology, Geoje, 53201, Republic of Korea; Marine Environmental Science Major, Korea University of Science and Technology, Geoje, 53201, Republic of Korea
| | - Jung-Hwan Kwon
- Division of Environmental Science and Ecological Engineering, Korea University, Seoul, 02841, Republic of Korea
| | - Un Hyuk Yim
- Oil and POPs Research Group, Korea Institute of Ocean Science and Technology, Geoje, 53201, Republic of Korea; Marine Environmental Science Major, Korea University of Science and Technology, Geoje, 53201, Republic of Korea.
| | - Sung Hwan Kim
- Department of Chemistry, Kyungpook National University, Daegu, 41566, Republic of Korea; Green-Nano Materials Research Center, Daegu, 41566, Republic of Korea.
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10
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Vergeynst L, Greer CW, Mosbech A, Gustavson K, Meire L, Poulsen KG, Christensen JH. Biodegradation, Photo-oxidation, and Dissolution of Petroleum Compounds in an Arctic Fjord during Summer. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2019; 53:12197-12206. [PMID: 31566367 DOI: 10.1021/acs.est.9b03336] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Increased economic activity in the Arctic may increase the risk of oil spills. Yet, little is known about the degradation of oil spills by solar radiation and the impact of nutrient limitation on oil biodegradation under Arctic conditions. We deployed adsorbents coated with thin oil films for up to 4 months in a fjord in SW Greenland to simulate and investigate in situ biodegradation and photo-oxidation of dispersed oil droplets. Oil compound depletion by dissolution, biodegradation, and photo-oxidation was untangled by gas chromatography-mass spectrometry-based oil fingerprinting. Biodegradation was limited by low nutrient concentrations, reaching 97% removal of nC13-26-alkanes only after 112 days. Sequencing of bacterial DNA showed the slow development of a bacterial biofilm on the oil films predominated by the known oil degrading bacteria Oleispira, Alkanindiges and Cycloclasticus. These taxa could be related to biodegradation of shorter-chain (≤C26) alkanes, longer-chain (≥C16) and branched alkanes, and polycyclic aromatic compounds (PACs), respectively. The combination of biodegradation, dissolution, and photo-oxidation depleted most PACs at substantially faster rates than the biodegradation of alkanes. In Arctic fjords during summer, nutrient limitation may severely delay oil biodegradation, but in the photic zone, photolytic transformation of PACs may play an important role.
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Affiliation(s)
| | - Charles W Greer
- National Research Council Canada , Montreal H4P 2R2 , Quebec , Canada
| | | | | | - Lorenz Meire
- Greenland Climate Research Centre , Greenland Institute of Natural Resources , Nuuk 3900 , Greenland
- Department of Estuarine and Delta Systems, Royal Netherlands Institute of Sea Research , Utrecht University , Yerseke 4401 NT , The Netherlands
| | - Kristoffer G Poulsen
- Department of Plant and Environmental Sciences, Faculty of Science , University of Copenhagen , Copenhagen 1871 , Denmark
| | - Jan H Christensen
- Department of Plant and Environmental Sciences, Faculty of Science , University of Copenhagen , Copenhagen 1871 , Denmark
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Cho E, Park M, Hur M, Kang G, Kim YH, Kim S. Molecular-level investigation of soils contaminated by oil spilled during the Gulf War. JOURNAL OF HAZARDOUS MATERIALS 2019; 373:271-277. [PMID: 30925386 DOI: 10.1016/j.jhazmat.2019.03.084] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2018] [Revised: 03/12/2019] [Accepted: 03/18/2019] [Indexed: 06/09/2023]
Abstract
In this study, molecular-level chemical compositions of soils contaminated by oil spilled during the Gulf War were studied. Two soil samples, respectively collected at 0.1 m and between 0.5 and 1 m below the surface from an oil spill site, were extracted with organic solvents and water. The extracts were analyzed via ultrahigh resolution FT-ICR and two-dimensional gas chromatography/high resolution mass spectrometry. The data showed that the spilled oil was significantly affected by vaporization due to high surface temperatures in the desert. The data obtained with (+) atmospheric pressure photo ionization (APPI) and (-) electrospray ionization (ESI) coupled with ultrahigh resolution-mass spectrometry (UHR-MS) indicated that the degradation of aromatic compounds and increase in oxygen-containing classes occurred in the following order: surface soil > below surface soil > crude oil. The oxygenated compounds were confirmed by principal component analysis. The score and loading plots of Ox and SOx showed that they were the major contributors to differentiate the samples. However, a comparison with previously reported oceanic oil spills showed that less significant degradation occurred even after almost 30 years. Our data can provide an information basis for designing a strategy for clean-up and restoration efforts of Gulf War oil spills.
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Affiliation(s)
- Eunji Cho
- Department of Chemistry, Kyungpook National University, 80 Daehak-ro, Buk-gu, Daegu 41566, Republic of Korea
| | - Moonhee Park
- Biomedical Omics Group, Korea Basic Science Institute, 162 Yeongudanji-ro, Cheongju, Chungcheongbuk-do 28119, Republic of Korea
| | - Manhoi Hur
- Department of Botany and Plant Sciences, and Institute of Integrative Genome Biology, University of California, Riverside, CA 92506, United States
| | - Guyoung Kang
- Department of Environmental Sciences, Hankuk University of Foreign Studies, 81 Oedae-ro, Mohyeon-eup, Cheoin-gu 17035, Republic of Korea.
| | - Young Hwan Kim
- Biomedical Omics Group, Korea Basic Science Institute, 162 Yeongudanji-ro, Cheongju, Chungcheongbuk-do 28119, Republic of Korea; Graduate School of Analytical Science and Technology, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, Republic of Korea.
| | - Sunghwan Kim
- Department of Chemistry, Kyungpook National University, 80 Daehak-ro, Buk-gu, Daegu 41566, Republic of Korea; Green-Nano Materials Research Center, 80 Daehak-ro, Buk-gu, Daegu 41566, Republic of Korea.
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Kostyukevich Y, Vlaskin M, Zherebker A, Grigorenko A, Borisova L, Nikolaev E. High-Resolution Mass Spectrometry Study of the Bio-Oil Samples Produced by Thermal Liquefaction of Microalgae in Different Solvents. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2019; 30:605-614. [PMID: 30761476 DOI: 10.1007/s13361-018-02128-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2018] [Revised: 12/03/2018] [Accepted: 12/18/2018] [Indexed: 06/09/2023]
Abstract
We have performed a comparative analysis of the bio-oil produced by thermal liquefaction of microalgae in different solvents using high-resolution Orbitrap mass spectrometry and GC-MS approach. Water, methanol, ethanol, butanol, isopropanol, acetonitrile, toluene, and hexane were used as solvents in which the liquefaction was performed. It was observed that all resulting oils demonstrate a considerable degree of similarity. For all samples, compounds containing 1 and 2 nitrogen atoms dominated in the positive ESI spectra, while a relative contribution of other compounds was small. In negative ESI mode, compounds having 2 to 7 oxygens were observed. Statistical analysis revealed that products can be combined in two groups depending on the solvent used for the liquefaction. To the first group, we can attribute the products obtained by using protic (alcohols) and to the second by using aprotic (acetonitrile, toluene) solvents. Nevertheless, based on our results, we concluded that solvent possesses a minor impact on molecular composition of bio-oil. We suggested that the driving force of the liquefaction reaction is the thermal dehydration of the carbohydrate in algae, resulting in water formation, which could be the trigger of the producing of bio-oil. To prove this hypothesis, we performed the reaction with the dry algae in the absence of the solvent and observed the formation of bio-oil. Graphical Abstract.
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Affiliation(s)
- Yury Kostyukevich
- Skolkovo Institute of Science and Technology, Novaya St. 100, Skolkovo, Moscow, 143025, Russia
- Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Leninskij pr. 38 k.2, Moscow, 119334, Russia
- Moscow Institute of Physics and Technology, Dolgoprudnyi, Moscow Region, 141700, Russia
| | - Mihail Vlaskin
- Joint Institute for High Temperatures (JIHT) of Russian Academy of Sciences, Izhorskaya st. 13 Bd.2, Moscow, 125412, Russia
| | - Alexander Zherebker
- Skolkovo Institute of Science and Technology, Novaya St. 100, Skolkovo, Moscow, 143025, Russia
- Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Leninskij pr. 38 k.2, Moscow, 119334, Russia
| | - Anatoly Grigorenko
- Joint Institute for High Temperatures (JIHT) of Russian Academy of Sciences, Izhorskaya st. 13 Bd.2, Moscow, 125412, Russia
| | - Ludmila Borisova
- National Research University Higher School of Economics, 20 Miasnitskaya Ulitsa, Moscow, 101000, Russia
| | - Eugene Nikolaev
- Skolkovo Institute of Science and Technology, Novaya St. 100, Skolkovo, Moscow, 143025, Russia.
- Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Leninskij pr. 38 k.2, Moscow, 119334, Russia.
- Moscow Institute of Physics and Technology, Dolgoprudnyi, Moscow Region, 141700, Russia.
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13
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Kostyukevich Y, Acter T, Zherebker A, Ahmed A, Kim S, Nikolaev E. Hydrogen/deuterium exchange in mass spectrometry. MASS SPECTROMETRY REVIEWS 2018; 37:811-853. [PMID: 29603316 DOI: 10.1002/mas.21565] [Citation(s) in RCA: 50] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2017] [Revised: 02/22/2018] [Accepted: 03/08/2018] [Indexed: 05/22/2023]
Abstract
The isotopic exchange approach is in use since the first observation of such reactions in 1933 by Lewis. This approach allows the investigation of the pathways of chemical and biochemical reactions, determination of structure, composition, and conformation of molecules. Mass spectrometry has now become one of the most important analytical tools for the monitoring of the isotopic exchange reactions. Investigation of conformational dynamics of proteins, quantitative measurements, obtaining chemical, and structural information about individual compounds of the complex natural mixtures are mainly based on the use of isotope exchange in combination with high resolution mass spectrometry. The most important reaction is the Hydrogen/Deuterium exchange, which is mainly performed in the solution. Recently we have developed the approach allowing performing of the Hydrogen/Deuterium reaction on-line directly in the ionization source under atmospheric pressure. Such approach simplifies the sample preparation and can accelerate the exchange reaction so that certain hydrogens that are considered as non-labile will also participate in the exchange. The use of in-ionization source H/D exchange in modern mass spectrometry for structural elucidation of molecules serves as the basic theme in this review. We will focus on the mechanisms of the isotopic exchange reactions and on the application of in-ESI, in-APCI, and in-APPI source Hydrogen/Deuterium exchange for the investigation of petroleum, natural organic matter, oligosaccharides, and proteins including protein-protein complexes. The simple scenario for adaptation of H/D exchange reactions into mass spectrometric method is also highlighted along with a couple of examples collected from previous studies.
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Affiliation(s)
- Yury Kostyukevich
- Skolkovo Institute of Science and Technology, Skolkovo, Russian Federation
- Institute for Energy Problems of Chemical Physics Russian Academy of Sciences, Moscow, Russia
- Moscow Institute of Physics and Technology, Dolgoprudnyi, Moscow Region, Russia
| | - Thamina Acter
- Department of Chemistry, Kyungpook National University, Daegu, Republic of Korea
| | - Alexander Zherebker
- Skolkovo Institute of Science and Technology, Skolkovo, Russian Federation
- Institute for Energy Problems of Chemical Physics Russian Academy of Sciences, Moscow, Russia
| | - Arif Ahmed
- Department of Chemistry, Kyungpook National University, Daegu, Republic of Korea
| | - Sunghwan Kim
- Department of Chemistry, Kyungpook National University, Daegu, Republic of Korea
- Green Nano Center, Kyungpook National University, Daegu, Republic of Korea
| | - Eugene Nikolaev
- Skolkovo Institute of Science and Technology, Skolkovo, Russian Federation
- Institute for Energy Problems of Chemical Physics Russian Academy of Sciences, Moscow, Russia
- Moscow Institute of Physics and Technology, Dolgoprudnyi, Moscow Region, Russia
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Lee S, Ahmed A, Kim S. Solvent composition dependent signal reduction of molecular ions generated from aromatic compounds in (+) atmospheric pressure photoionization mass spectrometry. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2018; 32:973-980. [PMID: 29600539 DOI: 10.1002/rcm.8127] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2018] [Revised: 03/14/2018] [Accepted: 03/16/2018] [Indexed: 06/08/2023]
Abstract
RATIONALE The ionization process is essential for successful mass spectrometric (MS) analysis because of its influence on selectivity and sensitivity. In particular, certain solvents reduce the ionization of the analyte, thereby reducing the overall sensitivity in atmospheric pressure photoionization (APPI). Since the sensitivity varies greatly depending on the solvents, a fundamental understanding of the mechanism is required. METHODS Standard solutions were analyzed using a (+)-APPI Q Exactive ion trap mass spectrometer (Thermo Scientific). Each solution was infused directly into the APPI source at a flow rate of 100 μL/min and the APPI source temperature was 300°C. Other operating mass spectrometric parameters were maintained under the same conditions. Quantum mechanical calculations were carried out using the Gaussian 09 suite program. RESULTS Density functional theory was used to calculate the reaction enthalpies (∆H) of the reactions between toluene and other solvents. The experimental and theoretical results showed good agreement. The abundances of analyte ions were well correlated with the calculated ∆H values. Therefore, the results strongly support the suggested signal reduction mechanism. In addition, linear correlations between the abundance of toluene and analyte molecular ions were observed, which also supports the suggested mechanism. CONCLUSIONS A solvent composition dependent signal reduction mechanism was suggested and evaluated for the (+)-APPI-MS analysis of polyaromatic hydrocarbons (PAHs) generating mainly molecular ions. Overall, the evidence provided in this work suggests that reactions between solvent cluster(s) and toluene molecular ions are responsible for the observed reductions in signal.
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Affiliation(s)
- Seulgidaun Lee
- Department of Chemistry, Kyungpook National University, Daegu, 702-701, Republic of Korea
| | - Arif Ahmed
- Department of Chemistry, Kyungpook National University, Daegu, 702-701, Republic of Korea
| | - Sunghwan Kim
- Department of Chemistry, Kyungpook National University, Daegu, 702-701, Republic of Korea
- Department of Chemistry, Green Nano Center, Daegu, 702-701, Republic of Korea
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Vergeynst L, Wegeberg S, Aamand J, Lassen P, Gosewinkel U, Fritt-Rasmussen J, Gustavson K, Mosbech A. Biodegradation of marine oil spills in the Arctic with a Greenland perspective. THE SCIENCE OF THE TOTAL ENVIRONMENT 2018; 626:1243-1258. [PMID: 29898532 DOI: 10.1016/j.scitotenv.2018.01.173] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2017] [Revised: 01/17/2018] [Accepted: 01/18/2018] [Indexed: 06/08/2023]
Abstract
New economic developments in the Arctic, such as shipping and oil exploitation, bring along unprecedented risks of marine oil spills. Microorganisms have played a central role in degrading and reducing the impact of the spilled oil during past oil disasters. However, in the Arctic, and in particular in its pristine areas, the self-cleaning capacity and biodegradation potential of the natural microbial communities have yet to be uncovered. This review compiles and investigates the current knowledge with respect to environmental parameters and biochemical constraints that control oil biodegradation in the Arctic. Hereby, seawaters off Greenland are considered as a case study. Key factors for biodegradation include the bioavailability of hydrocarbons, the presence of hydrocarbon-degrading bacteria and the availability of nutrients. We show how these key factors may be influenced by the physical oceanographic conditions in seawaters off Greenland and other environmental parameters including low temperature, sea ice, sunlight regime, suspended sediment plumes and phytoplankton blooms that characterize the Arctic. Based on the acquired insights, a first qualitative assessment of the biodegradation potential in seawaters off Greenland is presented. In addition to the most apparent Arctic characteristics, such as low temperature and sea ice, the impact of typical Arctic features such as the oligotrophic environment, poor microbial adaptation to hydrocarbon degradation, mixing of stratified water masses, and massive phytoplankton blooms and suspended sediment plumes merit to be topics of future investigation.
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Affiliation(s)
- Leendert Vergeynst
- Arctic Research Centre, Department of Bioscience, Aarhus University, Denmark.
| | - Susse Wegeberg
- Arctic Research Centre, Department of Bioscience, Aarhus University, Denmark
| | - Jens Aamand
- Department of Geochemistry, Geological Survey of Denmark and Greenland, Denmark
| | - Pia Lassen
- Department of Environmental Science, Aarhus University, Denmark
| | | | | | - Kim Gustavson
- Arctic Research Centre, Department of Bioscience, Aarhus University, Denmark
| | - Anders Mosbech
- Arctic Research Centre, Department of Bioscience, Aarhus University, Denmark
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16
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Kostyukevich Y, Vlaskin M, Borisova L, Zherebker A, Perminova I, Kononikhin A, Popov I, Nikolaev E. Investigation of bio-oil produced by hydrothermal liquefaction of food waste using ultrahigh resolution Fourier transform ion cyclotron resonance mass spectrometry. EUROPEAN JOURNAL OF MASS SPECTROMETRY (CHICHESTER, ENGLAND) 2018; 24:116-123. [PMID: 29050496 DOI: 10.1177/1469066717737904] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Recent research has revealed that more than 1.3 billion tons of food is wasted globally every year. The disposal of such huge biomass has become a challenge. In the present paper, we report the production of the bio-oil by hydrothermal liquefaction of three classes of food waste: meat, cheese and fruits. The highest yield of the bio-oil was observed for meat (∼60%) and cheese (∼75%), while for fruits, it was considerably low (∼10%). The molecular composition of the obtained bio-oil was investigated using ultrahigh resolution Fourier Transform Ion Cyclotron Resonance mass spectrometry and was found to be similar to that obtained from algae. Several thousand heteroatom compounds (N, N2, ON2, etc. classes) were reliably identified from each sample. It was found that bio-oils produced from meat and cheese have many compounds (∼90%) with common molecular formulas, while bio-oil produced from fruits differs considerably (∼30% of compounds are unique).
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Affiliation(s)
- Yury Kostyukevich
- 1 Skolkovo Institute of Science and Technology, Skolkovo, Russia
- 2 Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Moscow, Russia
- 3 Moscow Institute of Physics and Technology, Moscow Region, Russia
- 4 The Joint Institute for High Temperatures of Russian Academy of Sciences, Moscow, Russia
| | - Mikhail Vlaskin
- 4 The Joint Institute for High Temperatures of Russian Academy of Sciences, Moscow, Russia
| | - Ludmila Borisova
- 5 National Research University Higher School of Economics, Moscow, Russia
| | - Alexander Zherebker
- 6 Department of Chemistry, Lomonosov Moscow State University, Moscow, Russia
| | - Irina Perminova
- 6 Department of Chemistry, Lomonosov Moscow State University, Moscow, Russia
| | - Alexey Kononikhin
- 2 Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Moscow, Russia
- 4 The Joint Institute for High Temperatures of Russian Academy of Sciences, Moscow, Russia
| | - Igor Popov
- 2 Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Moscow, Russia
- 3 Moscow Institute of Physics and Technology, Moscow Region, Russia
| | - Eugene Nikolaev
- 1 Skolkovo Institute of Science and Technology, Skolkovo, Russia
- 2 Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Moscow, Russia
- 3 Moscow Institute of Physics and Technology, Moscow Region, Russia
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17
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Acter T, Lee S, Cho E, Jung MJ, Kim S. Design and Validation of In-Source Atmospheric Pressure Photoionization Hydrogen/Deuterium Exchange Mass Spectrometry with Continuous Feeding of D 2O. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 2018; 29:85-94. [PMID: 29080204 DOI: 10.1007/s13361-017-1831-8] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2017] [Revised: 09/24/2017] [Accepted: 10/01/2017] [Indexed: 06/07/2023]
Abstract
In this study, continuous in-source hydrogen/deuterium exchange (HDX) atmospheric pressure photoionization (APPI) mass spectrometry (MS) with continuous feeding of D2O was developed and validated. D2O was continuously fed using a capillary line placed on the center of a metal plate positioned between the UV lamp and nebulizer. The proposed system overcomes the limitations of previously reported APPI HDX-MS approaches where deuterated solvents were premixed with sample solutions before ionization. This is particularly important for APPI because solvent composition can greatly influence ionization efficiency as well as the solubility of analytes. The experimental parameters for APPI HDX-MS with continuous feeding of D2O were optimized, and the optimized conditions were applied for the analysis of nitrogen-, oxygen-, and sulfur-containing compounds. The developed method was also applied for the analysis of the polar fraction of a petroleum sample. Thus, the data presented in this study clearly show that the proposed HDX approach can serve as an effective analytical tool for the structural analysis of complex mixtures. Graphical abstract ᅟ.
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Affiliation(s)
- Thamina Acter
- Department of Chemistry, Kyungpook National University, Daegu, 702-701, Republic of Korea
| | - Seulgidaun Lee
- Department of Chemistry, Kyungpook National University, Daegu, 702-701, Republic of Korea
| | - Eunji Cho
- Department of Chemistry, Kyungpook National University, Daegu, 702-701, Republic of Korea
| | - Maeng-Joon Jung
- Department of Chemistry, Kyungpook National University, Daegu, 702-701, Republic of Korea
| | - Sunghwan Kim
- Department of Chemistry, Kyungpook National University, Daegu, 702-701, Republic of Korea.
- Department of Chemistry, Green Nano Center, Daegu, 702-701, Republic of Korea.
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18
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Kostyukevich Y, Shulga AA, Kononikhin A, Popov I, Nikolaev E, Deyev S. CID fragmentation, H/D exchange and supermetallization of Barnase-Barstar complex. Sci Rep 2017; 7:6176. [PMID: 28733680 PMCID: PMC5522418 DOI: 10.1038/s41598-017-06507-2] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2016] [Accepted: 06/13/2017] [Indexed: 01/02/2023] Open
Abstract
The barnase-barstar complex is one of the most stable protein-protein complexes and has a very wide range of possible applications. Here we report the use of top-down mass spectrometry for the investigation of the structure of this complex, its ionization via ESI, isolation and fragmentation. It was found that the asymmetry of the resulting charge state distributions of the protein monomer product ions increased as the charge state of the precursor ions increased. For the investigation of the 3D structure of the complex, the gas phase H/D exchange reaction was used. In addition, supermetallized ions of the complex with Zn were produced and investigated. It was observed that an increase in the number of metals bound to the complex results in a change in complex stability and the charge distribution between protein fragment. Analysis of the fragmentation pattern of the supermetallized complex [bn-b* + 5Zn]10+ indicated that this ion is present in different conformations with different charges and Zn distributions. Since Zn cannot migrate, such structures must be formed during ionization.
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Affiliation(s)
- Yury Kostyukevich
- Skolkovo Institute of Science and Technology Novaya St., 100, Skolkovo, 143025, Russian Federation.,Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Leninskij pr. 38, k.2, 119334, Moscow, Russia.,Emanuel Institute for Biochemical Physics, Russian Academy of Sciences Kosygina st. 4, 119334, Moscow, Russia.,Moscow Institute of Physics and Technology, 141700, Dolgoprudnyi, Moscow Region, Russia
| | - Aleksej A Shulga
- Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences, 16/10, Miklukho-Maklaya str., Moscow, 117997, Russian Federation
| | - Alexey Kononikhin
- Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Leninskij pr. 38, k.2, 119334, Moscow, Russia.,Moscow Institute of Physics and Technology, 141700, Dolgoprudnyi, Moscow Region, Russia
| | - Igor Popov
- Emanuel Institute for Biochemical Physics, Russian Academy of Sciences Kosygina st. 4, 119334, Moscow, Russia.,Moscow Institute of Physics and Technology, 141700, Dolgoprudnyi, Moscow Region, Russia
| | - Eugene Nikolaev
- Skolkovo Institute of Science and Technology Novaya St., 100, Skolkovo, 143025, Russian Federation. .,Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Leninskij pr. 38, k.2, 119334, Moscow, Russia. .,Emanuel Institute for Biochemical Physics, Russian Academy of Sciences Kosygina st. 4, 119334, Moscow, Russia. .,Moscow Institute of Physics and Technology, 141700, Dolgoprudnyi, Moscow Region, Russia.
| | - Sergey Deyev
- Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences, 16/10, Miklukho-Maklaya str., Moscow, 117997, Russian Federation.,National Research Tomsk Polytechnic University, 30, av. Lenina, Tomsk, 634050, Russia
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19
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Kostyukevich Y, Kononikhin A, Popov I, Nikolaev E. Thermal dissociation of ions limits the degree of the gas-phase H/D exchange at the atmospheric pressure. JOURNAL OF MASS SPECTROMETRY : JMS 2017; 52:204-209. [PMID: 28152260 DOI: 10.1002/jms.3917] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2016] [Revised: 01/18/2017] [Accepted: 01/27/2017] [Indexed: 06/06/2023]
Abstract
We present the application of the extended desolvating capillaries for increasing the degree of the gas-phase hydrogen/deuterium exchange reaction at atmospheric pressure. The use of the extended capillaries results in the increase of the time that ions spend in the high pressure region, what leads to the significant improvement of the efficiency of the reaction. For the small protein ubiquitin, it was observed that for the same temperature, the number of exchanges increases with the decrease of the charge state so that the lowest charge state can exchange twice the number of hydrogen than the highest one. With the increase of the temperature, the difference decreases, and eventually, the number of exchanges equalizes for all charge states. The value of this temperature and the corresponding number of exchanges depend on the geometric parameters of the capillary. Further increase of the temperature leads to the thermal dissociation of the protein ion. The observed b/y fragments are identical to those produced by collision-induced dissociation performed in the ion trap. Copyright © 2017 John Wiley & Sons, Ltd.
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Affiliation(s)
- Y Kostyukevich
- Skolkovo Institute of Science and Technology, Novaya St., 100, Skolkovo, 143025, Russia
- Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Leninskij pr. 38 k.2, 119334, Moscow, Russia
- Emanuel Institute for Biochemical Physics, Russian Academy of Sciences, Kosygina st. 4, 119334, Moscow, Russia
- Moscow Institute of Physics and Technology, 141700 Dolgoprudnyi, Moscow Region, Russia
| | - A Kononikhin
- Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Leninskij pr. 38 k.2, 119334, Moscow, Russia
- Moscow Institute of Physics and Technology, 141700 Dolgoprudnyi, Moscow Region, Russia
| | - I Popov
- Emanuel Institute for Biochemical Physics, Russian Academy of Sciences, Kosygina st. 4, 119334, Moscow, Russia
- Moscow Institute of Physics and Technology, 141700 Dolgoprudnyi, Moscow Region, Russia
| | - E Nikolaev
- Skolkovo Institute of Science and Technology, Novaya St., 100, Skolkovo, 143025, Russia
- Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Leninskij pr. 38 k.2, 119334, Moscow, Russia
- Emanuel Institute for Biochemical Physics, Russian Academy of Sciences, Kosygina st. 4, 119334, Moscow, Russia
- Moscow Institute of Physics and Technology, 141700 Dolgoprudnyi, Moscow Region, Russia
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20
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Kostyukevich Y, Vlaskin M, Vladimirov G, Zherebker A, Kononikhin A, Popov I, Nikolaev E. The investigation of the bio-oil produced by hydrothermal liquefaction of Spirulina platensis using ultrahigh resolution Fourier transform ion cyclotron resonance mass spectrometry. EUROPEAN JOURNAL OF MASS SPECTROMETRY (CHICHESTER, ENGLAND) 2017; 23:83-88. [PMID: 28657415 DOI: 10.1177/1469066717702648] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
We report the investigation of the hydrothermal liquefaction products of the Spirulina platensis microalgae by using the Fourier transform ion cyclotron resonance mass spectrometry. The hydrothermal liquefaction produced two fractions: one with boiling temperature below 300℃ and the dense residue that remained in the reactor. It was observed that N2 and N classes of compounds that dominate in the positive ESI Fourier transform ion cyclotron resonance spectra for both fractions, and that the light fraction is considerably more saturated then the heavy one. The performed hydrogen/deuterium exchange reaction indicated the presence of the onium compounds in the bio-oil.
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Affiliation(s)
- Yury Kostyukevich
- 1 Skolkovo Institute of Science and Technology, Skolkovo, Russian
- 2 Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Moscow, Russia
- 3 Emanuel Institute for Biochemical Physics, Russian Academy of Sciences, Moscow, Russia
- 4 Moscow Institute of Physics and Technology, Moscow, Russia
| | - Mikhail Vlaskin
- 5 Joint Institute for High Temperatures (JIHT) of Russian Academy of Sciences, Moscow, Russia
| | - Gleb Vladimirov
- 1 Skolkovo Institute of Science and Technology, Skolkovo, Russian
- 2 Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Moscow, Russia
| | - Alexander Zherebker
- 1 Skolkovo Institute of Science and Technology, Skolkovo, Russian
- 2 Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Moscow, Russia
- 6 Department of Chemistry, Lomonosov Moscow State University, Moscow, Russia
| | - Alexey Kononikhin
- 2 Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Moscow, Russia
- 4 Moscow Institute of Physics and Technology, Moscow, Russia
| | - Igor Popov
- 3 Emanuel Institute for Biochemical Physics, Russian Academy of Sciences, Moscow, Russia
- 4 Moscow Institute of Physics and Technology, Moscow, Russia
| | - Eugene Nikolaev
- 1 Skolkovo Institute of Science and Technology, Skolkovo, Russian
- 2 Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Moscow, Russia
- 3 Emanuel Institute for Biochemical Physics, Russian Academy of Sciences, Moscow, Russia
- 4 Moscow Institute of Physics and Technology, Moscow, Russia
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21
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Islam A, Ahmed A, Hur M, Thorn K, Kim S. Molecular-level evidence provided by ultrahigh resolution mass spectrometry for oil-derived doc in groundwater at Bemidji, Minnesota. JOURNAL OF HAZARDOUS MATERIALS 2016; 320:123-132. [PMID: 27526278 DOI: 10.1016/j.jhazmat.2016.08.018] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2016] [Revised: 08/05/2016] [Accepted: 08/06/2016] [Indexed: 06/06/2023]
Abstract
Dissolved organic matter samples extracted from ground water at the USGS Bemidji oil spill site in Minnesota were investigated by ultrahigh resolution mass spectrometry. Principle component analysis (PCA) of the elemental composition assignments of the samples showed that the score plots for the contaminated sites were well separated from those for the uncontaminated sites. Additionally, spectra obtained from the same sampling site 7 and 19 years after the spill were grouped together in the score plot, strongly suggesting a steady state of contamination within the 12year interval. The double bond equivalence (DBE) of Ox class compounds was broader for the samples from the contaminated sites, because of the complex nature of oil and the consequent formation of compounds with saturated and/or aromatic structures from the oxygenated products of oil. In addition, Ox class compounds with a relatively smaller number of x (x<8; x=number of oxygen) and OxS1 class compounds were more abundant in the samples from the contaminated sites, because of the lower oxygen and higher sulfur contents of the oil compared to humic substances. The molecular-level signatures presented here can be a fundamental basis for in-depth analysis of oil contamination.
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Affiliation(s)
- Ananna Islam
- Kyungpook National University, Department of Chemistry, Daegu 702-701, Republic of Korea
| | - Arif Ahmed
- Kyungpook National University, Department of Chemistry, Daegu 702-701, Republic of Korea
| | - Manhoi Hur
- Department of Genetics, Development and Cell Biology, Iowa State University, Ames, IA 50011, USA; Center for Metabolic Biology, Iowa State University, Ames, IA 50011, USA
| | - Kevin Thorn
- Water Mission Area, U.S. Geological Survey, Denver, CO 80225, USA
| | - Sunghwan Kim
- Kyungpook National University, Department of Chemistry, Daegu 702-701, Republic of Korea; Green Nano Center, Department of Chemistry, Daegu 702-701, Republic of Korea.
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Evaporation of the charged droplets in the heating flow tube under atmospheric pressure: observation of the H/D exchange and supermetallization. MENDELEEV COMMUNICATIONS 2016. [DOI: 10.1016/j.mencom.2016.09.026] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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23
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Kostyukevich Y, Solovyov S, Kononikhin A, Popov I, Nikolaev E. The investigation of the bitumen from ancient Greek amphora using FT ICR MS, H/D exchange and novel spectrum reduction approach. JOURNAL OF MASS SPECTROMETRY : JMS 2016; 51:430-436. [PMID: 27270866 DOI: 10.1002/jms.3769] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2016] [Revised: 03/18/2016] [Accepted: 03/26/2016] [Indexed: 06/06/2023]
Abstract
Recently Russian archeologists have discovered on Taman peninsula an ancient (V B.C.) Greek amphora full of dense bitumen. This is the oldest amphora in the world that contains bitumen. We report the investigation of this bitumen using ultrahigh resolution Fourier transform mass spectrometry. Also we used recently developed in-ESI source Hydrogen/Deuterium exchange approach for the structural characterization of the individual molecules and estimation of the biodegradation of the bitumen. The increase of number of the labile hydrogens compared to the non-degraded oil can serve as an additional evidence of the degradation of bitumen via oxidation. For the facilitation of the spectrum processing we have developed the special iterative spectrum reduction approach. It was observed that molecules that have only oxygen heteroatoms possess two -OH groups what is unusual for the petroleum. Based on this we suggested that the bitumen degraded during its being in amphora for 2500 years. Copyright © 2016 John Wiley & Sons, Ltd.
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Affiliation(s)
- Yury Kostyukevich
- Skolkovo Institute of Science and Technology, Novaya St., 100, Skolkovo, 143025, Russia
- Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Leninskij pr 38 k.2, 119334, Moscow, Russia
- Emanuel Institute for Biochemical Physics, Russian Academy of Sciences, Kosygina st. 4, 119334, Moscow, Russia
- Moscow Institute of Physics and Technology, 141700, Dolgoprudnyi, Moscow Region, Russia
| | - Sergey Solovyov
- Institute for the History of Material Culture, Dvortsovaya Naberezhnaya, 18, Saint Petersburg, 191186, Russia
| | - Alexey Kononikhin
- Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Leninskij pr 38 k.2, 119334, Moscow, Russia
- Moscow Institute of Physics and Technology, 141700, Dolgoprudnyi, Moscow Region, Russia
| | - Igor Popov
- Emanuel Institute for Biochemical Physics, Russian Academy of Sciences, Kosygina st. 4, 119334, Moscow, Russia
- Moscow Institute of Physics and Technology, 141700, Dolgoprudnyi, Moscow Region, Russia
| | - Eugene Nikolaev
- Skolkovo Institute of Science and Technology, Novaya St., 100, Skolkovo, 143025, Russia
- Institute for Energy Problems of Chemical Physics, Russian Academy of Sciences, Leninskij pr 38 k.2, 119334, Moscow, Russia
- Emanuel Institute for Biochemical Physics, Russian Academy of Sciences, Kosygina st. 4, 119334, Moscow, Russia
- Moscow Institute of Physics and Technology, 141700, Dolgoprudnyi, Moscow Region, Russia
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Kostyukevich Y, Borisova L, Kononikhin A, Popov I, Kukaev E, Nikolaev E. Thermal desorption combined with atmospheric pressure photo ionization for the analysis of volatile compounds and its possible applications. EUROPEAN JOURNAL OF MASS SPECTROMETRY (CHICHESTER, ENGLAND) 2016; 22:313-317. [PMID: 27900861 DOI: 10.1255/ejms.1442] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
We report an approach to study volatile organic compounds based on thermal desorption combined with atmospheric pressure photo ionization. The approach allows the sequential evaporation of different fractions of the sample, which simplifies the mass spectrum. We have applied the developed method for the detection of petroleum in vegetable oil. We have shown that in the negative mode, ions of fatty acids corresponding to vegetable oil dominates, while in the positive mode under relatively low temperature the light fraction of petroleum rapidly evaporates making it easy detectable.
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Affiliation(s)
- Yury Kostyukevich
- Skolkovo Institute of Science and Technology Novaya St., 100, Skolkovo 143025 Russian Federation and Institute for Energy Problems of Chemical Physics Russian Academy of Sciences Leninskij pr. 38 k.2, 119334 Moscow, Russia and Emanuel Institute for Biochemical Physics Russian Academy of Sciences Kosygina st. 4, 119334 Moscow, Russia and Moscow Institute of Physics and Technology, 141700 Dolgoprudnyi, Moscow Region, Russia.
| | - Ludmila Borisova
- National Research University Higher School of Economics, 20 Miasnitskaya Ulitsa, Moscow 101000, Russia
| | - Alexey Kononikhin
- Institute for Energy Problems of Chemical Physics Russian Academy of Sciences Leninskij pr. 38 k.2, 119334 Moscow, Russia and Moscow Institute of Physics and Technology, 141700 Dolgoprudnyi, Moscow Region, Russia
| | - Igor Popov
- Emanuel Institute for Biochemical Physics Russian Academy of Sciences Kosygina st. 4, 119334 Moscow, Russia and Moscow Institute of Physics and Technology, 141700 Dolgoprudnyi, Moscow Region, Russia
| | - Eugene Kukaev
- Emanuel Institute for Biochemical Physics Russian Academy of Sciences Kosygina st. 4, 119334 Moscow, Russia and Moscow Institute of Physics and Technology, 141700 Dolgoprudnyi, Moscow Region, Russia
| | - Eugene Nikolaev
- Skolkovo Institute of Science and Technology Novaya St., 100, Skolkovo 143025 Russian Federation and Institute for Energy Problems of Chemical Physics Russian Academy of Sciences Leninskij pr. 38 k.2, 119334 Moscow, Russia and Emanuel Institute for Biochemical Physics Russian Academy of Sciences Kosygina st. 4, 119334 Moscow, Russia and Moscow Institute of Physics and Technology, 141700 Dolgoprudnyi, Moscow Region, Russia
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