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Zuo Q, Li R, Shi B, Hong J, Zhu Y, Chen X, Wu Y, Guo J. U-shaped convolutional transformer GAN with multi-resolution consistency loss for restoring brain functional time-series and dementia diagnosis. Front Comput Neurosci 2024; 18:1387004. [PMID: 38694950 PMCID: PMC11061376 DOI: 10.3389/fncom.2024.1387004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2024] [Accepted: 04/02/2024] [Indexed: 05/04/2024] Open
Abstract
Introduction The blood oxygen level-dependent (BOLD) signal derived from functional neuroimaging is commonly used in brain network analysis and dementia diagnosis. Missing the BOLD signal may lead to bad performance and misinterpretation of findings when analyzing neurological disease. Few studies have focused on the restoration of brain functional time-series data. Methods In this paper, a novel U-shaped convolutional transformer GAN (UCT-GAN) model is proposed to restore the missing brain functional time-series data. The proposed model leverages the power of generative adversarial networks (GANs) while incorporating a U-shaped architecture to effectively capture hierarchical features in the restoration process. Besides, the multi-level temporal-correlated attention and the convolutional sampling in the transformer-based generator are devised to capture the global and local temporal features for the missing time series and associate their long-range relationship with the other brain regions. Furthermore, by introducing multi-resolution consistency loss, the proposed model can promote the learning of diverse temporal patterns and maintain consistency across different temporal resolutions, thus effectively restoring complex brain functional dynamics. Results We theoretically tested our model on the public Alzheimer's Disease Neuroimaging Initiative (ADNI) dataset, and our experiments demonstrate that the proposed model outperforms existing methods in terms of both quantitative metrics and qualitative assessments. The model's ability to preserve the underlying topological structure of the brain functional networks during restoration is a particularly notable achievement. Conclusion Overall, the proposed model offers a promising solution for restoring brain functional time-series and contributes to the advancement of neuroscience research by providing enhanced tools for disease analysis and interpretation.
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Affiliation(s)
- Qiankun Zuo
- Hubei Key Laboratory of Digital Finance Innovation, Hubei University of Economics, Wuhan, Hubei, China
- School of Information Engineering, Hubei University of Economics, Wuhan, Hubei, China
- Hubei Internet Finance Information Engineering Technology Research Center, Hubei University of Economics, Wuhan, Hubei, China
| | - Ruiheng Li
- Hubei Key Laboratory of Digital Finance Innovation, Hubei University of Economics, Wuhan, Hubei, China
- School of Information Engineering, Hubei University of Economics, Wuhan, Hubei, China
| | - Binghua Shi
- Hubei Key Laboratory of Digital Finance Innovation, Hubei University of Economics, Wuhan, Hubei, China
- School of Information Engineering, Hubei University of Economics, Wuhan, Hubei, China
| | - Jin Hong
- Medical Research Institute, Guangdong Provincial People's Hospital (Guangdong Academy of Medical Sciences), Southern Medical University, Guangzhou, China
| | - Yanfei Zhu
- School of Foreign Languages, Sun Yat-sen University, Guangzhou, China
| | - Xuhang Chen
- Faculty of Science and Technology, University of Macau, Taipa, Macao SAR, China
| | - Yixian Wu
- School of Mechanical Engineering, Beijing Institute of Petrochemical Technology, Beijing, China
| | - Jia Guo
- Hubei Key Laboratory of Digital Finance Innovation, Hubei University of Economics, Wuhan, Hubei, China
- School of Information Engineering, Hubei University of Economics, Wuhan, Hubei, China
- Hubei Internet Finance Information Engineering Technology Research Center, Hubei University of Economics, Wuhan, Hubei, China
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Chumin EJ, Cutts SA, Risacher SL, Apostolova LG, Farlow MR, McDonald BC, Wu YC, Betzel R, Saykin AJ, Sporns O. Edge time series components of functional connectivity and cognitive function in Alzheimer's disease. Brain Imaging Behav 2024; 18:243-255. [PMID: 38008852 PMCID: PMC10844434 DOI: 10.1007/s11682-023-00822-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/04/2023] [Indexed: 11/28/2023]
Abstract
Understanding the interrelationships of brain function as measured by resting-state magnetic resonance imaging and neuropsychological/behavioral measures in Alzheimer's disease is key for advancement of neuroimaging analysis methods in clinical research. The edge time-series framework recently developed in the field of network neuroscience, in combination with other network science methods, allows for investigations of brain-behavior relationships that are not possible with conventional functional connectivity methods. Data from the Indiana Alzheimer's Disease Research Center sample (53 cognitively normal control, 47 subjective cognitive decline, 32 mild cognitive impairment, and 20 Alzheimer's disease participants) were used to investigate relationships between functional connectivity components, each derived from a subset of time points based on co-fluctuation of regional signals, and measures of domain-specific neuropsychological functions. Multiple relationships were identified with the component approach that were not found with conventional functional connectivity. These involved attentional, limbic, frontoparietal, and default mode systems and their interactions, which were shown to couple with cognitive, executive, language, and attention neuropsychological domains. Additionally, overlapping results were obtained with two different statistical strategies (network contingency correlation analysis and network-based statistics correlation). Results demonstrate that connectivity components derived from edge time-series based on co-fluctuation reveal disease-relevant relationships not observed with conventional static functional connectivity.
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Affiliation(s)
- Evgeny J Chumin
- Department of Psychological and Brain Sciences, Indiana University (IU), Psychology Building 308, 1101 E 10th St, Bloomington, IN, 47405, USA.
- Indiana University Network Sciences Institute, IU, Bloomington, IN, USA.
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, USA.
- Indiana Alzheimer's Disease Research Center, IUSM, Indianapolis, IN, USA.
- Department of Radiology and Imaging Sciences, IUSM, Indianapolis, IN, USA.
| | - Sarah A Cutts
- Department of Psychological and Brain Sciences, Indiana University (IU), Psychology Building 308, 1101 E 10th St, Bloomington, IN, 47405, USA
- Program in Neuroscience, IU, Bloomington, IN, USA
| | - Shannon L Risacher
- Indiana University Network Sciences Institute, IU, Bloomington, IN, USA
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, USA
- Indiana Alzheimer's Disease Research Center, IUSM, Indianapolis, IN, USA
- Department of Radiology and Imaging Sciences, IUSM, Indianapolis, IN, USA
| | - Liana G Apostolova
- Indiana University Network Sciences Institute, IU, Bloomington, IN, USA
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, USA
- Indiana Alzheimer's Disease Research Center, IUSM, Indianapolis, IN, USA
- Department of Radiology and Imaging Sciences, IUSM, Indianapolis, IN, USA
- Department of Neurology, IUSM, Indianapolis, IN, USA
| | - Martin R Farlow
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, USA
- Indiana Alzheimer's Disease Research Center, IUSM, Indianapolis, IN, USA
- Department of Neurology, IUSM, Indianapolis, IN, USA
| | - Brenna C McDonald
- Indiana University Network Sciences Institute, IU, Bloomington, IN, USA
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, USA
- Indiana Alzheimer's Disease Research Center, IUSM, Indianapolis, IN, USA
- Department of Radiology and Imaging Sciences, IUSM, Indianapolis, IN, USA
- Department of Neurology, IUSM, Indianapolis, IN, USA
| | - Yu-Chien Wu
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, USA
- Indiana Alzheimer's Disease Research Center, IUSM, Indianapolis, IN, USA
- Department of Radiology and Imaging Sciences, IUSM, Indianapolis, IN, USA
| | - Richard Betzel
- Department of Psychological and Brain Sciences, Indiana University (IU), Psychology Building 308, 1101 E 10th St, Bloomington, IN, 47405, USA
- Indiana University Network Sciences Institute, IU, Bloomington, IN, USA
- Program in Neuroscience, IU, Bloomington, IN, USA
| | - Andrew J Saykin
- Indiana University Network Sciences Institute, IU, Bloomington, IN, USA
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, USA
- Indiana Alzheimer's Disease Research Center, IUSM, Indianapolis, IN, USA
- Department of Radiology and Imaging Sciences, IUSM, Indianapolis, IN, USA
- Department of Neurology, IUSM, Indianapolis, IN, USA
| | - Olaf Sporns
- Department of Psychological and Brain Sciences, Indiana University (IU), Psychology Building 308, 1101 E 10th St, Bloomington, IN, 47405, USA
- Indiana University Network Sciences Institute, IU, Bloomington, IN, USA
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, USA
- Indiana Alzheimer's Disease Research Center, IUSM, Indianapolis, IN, USA
- Program in Neuroscience, IU, Bloomington, IN, USA
- Department of Radiology and Imaging Sciences, IUSM, Indianapolis, IN, USA
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3
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Zhang D, Huang Y, Liu S, Gao J, Liu W, Liu W, Ai K, Lei X, Zhang X. Structural and functional connectivity alteration patterns of the cingulate gyrus in Type 2 diabetes. Ann Clin Transl Neurol 2023; 10:2305-2315. [PMID: 37822294 PMCID: PMC10723245 DOI: 10.1002/acn3.51918] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2023] [Revised: 08/22/2023] [Accepted: 09/08/2023] [Indexed: 10/13/2023] Open
Abstract
OBJECTIVE We aimed to reveal the role of structural and functional alterations of cingulate gyrus in early cognitive impairment in Type 2 diabetes mellitus (T2DM) patients. METHODS Fifty-six T2DM patients and 60 healthy controls (HCs) underwent a neuropsychological assessment and sagittal three-dimensional T1-weighted and resting-state functional MRI. Differences in the cortical thickness of the cingulate cortex and the functional connectivity (FC) of the nine subregions of the cingulate gyrus and the whole brain were compared between T2DM patients and HCs. Correlation analysis was performed between cortex thickness and FC and the participants' clinical/cognitive variables. RESULTS The cortical thickness of the cingulate gyrus was not significantly different between T2DM patients and HCs. However, the T2DM patients showed significantly lower FC between the pregenual ACC (pACC) and the bilateral hippocampus, significantly higher FC between the pACC and bilateral lateral prefrontal cortex (LPFC) and left precentral gyrus, and significantly lower FC between the retrosplenial cortex (RSC) and right cerebellar Crus I. The FC between the pACC and the left hippocampus was negatively correlated with the FC between the pACC and LPFC (r = -0.306, p = 0.022). INTERPRETATION The pACC and the RSC show dysfunctional connectivity before the appearance of structural abnormalities in T2DM patients. Abnormal FC of the pACC with the bilateral hippocampus and LPFC may imply a neural compensatory mechanism for memory function. These findings provide valuable information and new directions for possible interventions for the T2DM-related cognitive impairment.
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Affiliation(s)
- Dongsheng Zhang
- Department of MRIShaanxi Provincial People's HospitalXi'an710068China
| | - Yang Huang
- Department of MRIShaanxi Provincial People's HospitalXi'an710068China
| | - Shasha Liu
- Department of MRIShaanxi Provincial People's HospitalXi'an710068China
| | - Jie Gao
- Department of MRIShaanxi Provincial People's HospitalXi'an710068China
| | - Weirui Liu
- Department of MRIShaanxi Provincial People's HospitalXi'an710068China
| | - Wanting Liu
- Department of MRIShaanxi Provincial People's HospitalXi'an710068China
| | - Kai Ai
- Department of Clinical SciencePhilips HealthcareXi'an710000China
| | - Xiaoyan Lei
- Department of MRIShaanxi Provincial People's HospitalXi'an710068China
| | - Xiaoling Zhang
- Department of MRIShaanxi Provincial People's HospitalXi'an710068China
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4
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Sun Y, Shi Q, Ye M, Miao A. Topological properties and connectivity patterns in brain networks of patients with refractory epilepsy combined with intracranial electrical stimulation. Front Neurosci 2023; 17:1282232. [PMID: 38075280 PMCID: PMC10701286 DOI: 10.3389/fnins.2023.1282232] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Accepted: 11/07/2023] [Indexed: 02/12/2024] Open
Abstract
Objective Although intracranial electrical stimulation has emerged as a treatment option for various diseases, its impact on the properties of brain networks remains challenging due to its invasive nature. The combination of intracranial electrical stimulation and whole-brain functional magnetic resonance imaging (fMRI) in patients with refractory epilepsy (RE) makes it possible to study the network properties associated with electrical stimulation. Thus, our study aimed to investigate the brain network characteristics of RE patients with concurrent electrical stimulation and obtain possible clinical biomarkers. Methods Our study used the GRETNA toolbox, a graph theoretical network analysis toolbox for imaging connectomics, to calculate and analyze the network topological attributes including global measures (small-world parameters and network efficiency) and nodal characteristics. The resting-state fMRI (rs-fMRI) and the fMRI concurrent electrical stimulation (es-fMRI) of RE patients were utilized to make group comparisons with healthy controls to identify the differences in network topology properties. Network properties comparisons before and after electrode implantation in the same patient were used to further analyze stimulus-related changes in network properties. Modular analysis was used to examine connectivity and distribution characteristics in the brain networks of all participants in study. Results Compared to healthy controls, the rs-fMRI and the es-fMRI of RE patients exhibited impaired small-world property and reduced network efficiency. Nodal properties, such as nodal clustering coefficient (NCp), betweenness centrality (Bc), and degree centrality (Dc), exhibited differences between RE patients (including rs-fMRI and es-fMRI) and healthy controls. The network connectivity of RE patients (including rs-fMRI and es-fMRI) showed reduced intra-modular connections in subcortical areas and the occipital lobe, as well as decreased inter-modular connections between frontal and subcortical regions, and parieto-occipital regions compared to healthy controls. The brain networks of es-fMRI showed a relatively weaker small-world structure compared to rs-fMRI. Conclusion The brain networks of RE patients exhibited a reduced small-world property, with a tendency toward random networks. The network connectivity patterns in RE patients exhibited reduced connections between cortical and subcortical regions and enhanced connections among parieto-occipital regions. Electrical stimulation can modulate brain network activity, leading to changes in network connectivity patterns and properties.
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Affiliation(s)
- Yulei Sun
- Department of Neurology, Nanjing BenQ Medical Center, The Affiliated BenQ Hospital of Nanjing Medical University, Nanjing, Jiangsu, China
- Department of Neurology, The Affiliated Brain Hospital of Nanjing Medical University, Nanjing, Jiangsu, China
| | - Qi Shi
- Department of Neurology, The Affiliated Wuxi People’s Hospital of Nanjing Medical University, Wuxi, Jiangsu, China
| | - Min Ye
- Department of Neurology, Nanjing BenQ Medical Center, The Affiliated BenQ Hospital of Nanjing Medical University, Nanjing, Jiangsu, China
| | - Ailiang Miao
- Department of Neurology, The Affiliated Brain Hospital of Nanjing Medical University, Nanjing, Jiangsu, China
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5
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Chumin EJ, Cutts SA, Risacher SL, Apostolova LG, Farlow MR, McDonald BC, Wu YC, Betzel R, Saykin AJ, Sporns O. Edge Time Series Components of Functional Connectivity and Cognitive Function in Alzheimer's Disease. MEDRXIV : THE PREPRINT SERVER FOR HEALTH SCIENCES 2023:2023.05.13.23289936. [PMID: 38014005 PMCID: PMC10680898 DOI: 10.1101/2023.05.13.23289936] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2023]
Abstract
Understanding the interrelationships of brain function as measured by resting-state magnetic resonance imaging and neuropsychological/behavioral measures in Alzheimer's disease is key for advancement of neuroimaging analysis methods in clinical research. The edge time-series framework recently developed in the field of network neuroscience, in combination with other network science methods, allows for investigations of brain-behavior relationships that are not possible with conventional functional connectivity methods. Data from the Indiana Alzheimer's Disease Research Center sample (53 cognitively normal control, 47 subjective cognitive decline, 32 mild cognitive impairment, and 20 Alzheimer's disease participants) were used to investigate relationships between functional connectivity components, each derived from a subset of time points based on co-fluctuation of regional signals, and measures of domain-specific neuropsychological functions. Multiple relationships were identified with the component approach that were not found with conventional functional connectivity. These involved attentional, limbic, frontoparietal, and default mode systems and their interactions, which were shown to couple with cognitive, executive, language, and attention neuropsychological domains. Additionally, overlapping results were obtained with two different statistical strategies (network contingency correlation analysis and network-based statistics correlation). Results demonstrate that connectivity components derived from edge time-series based on co-fluctuation reveal disease-relevant relationships not observed with conventional static functional connectivity.
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Affiliation(s)
- Evgeny J. Chumin
- Department of Psychological and Brain Sciences, Indiana University (IU), Bloomington, IN, United States
- Indiana University Network Sciences Institute, IU, Bloomington, IN, United States
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, United States
- Indiana Alzheimer’s Disease Research Center, IUSM, Indianapolis, IN, United States
- Department of Radiology and Imaging Sciences, IUSM, Indianapolis, IN, United States
| | - Sarah A. Cutts
- Department of Psychological and Brain Sciences, Indiana University (IU), Bloomington, IN, United States
- Program in Neuroscience, IU, Bloomington, IN, United States
| | - Shannon L. Risacher
- Indiana University Network Sciences Institute, IU, Bloomington, IN, United States
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, United States
- Indiana Alzheimer’s Disease Research Center, IUSM, Indianapolis, IN, United States
- Department of Radiology and Imaging Sciences, IUSM, Indianapolis, IN, United States
| | - Liana G. Apostolova
- Indiana University Network Sciences Institute, IU, Bloomington, IN, United States
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, United States
- Indiana Alzheimer’s Disease Research Center, IUSM, Indianapolis, IN, United States
- Department of Radiology and Imaging Sciences, IUSM, Indianapolis, IN, United States
- Department of Neurology, IUSM, Indianapolis, IN, United States
| | - Martin R. Farlow
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, United States
- Indiana Alzheimer’s Disease Research Center, IUSM, Indianapolis, IN, United States
- Department of Neurology, IUSM, Indianapolis, IN, United States
| | - Brenna C. McDonald
- Indiana University Network Sciences Institute, IU, Bloomington, IN, United States
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, United States
- Indiana Alzheimer’s Disease Research Center, IUSM, Indianapolis, IN, United States
- Department of Radiology and Imaging Sciences, IUSM, Indianapolis, IN, United States
- Department of Neurology, IUSM, Indianapolis, IN, United States
| | - Yu-Chien Wu
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, United States
- Indiana Alzheimer’s Disease Research Center, IUSM, Indianapolis, IN, United States
- Department of Radiology and Imaging Sciences, IUSM, Indianapolis, IN, United States
| | - Richard Betzel
- Department of Psychological and Brain Sciences, Indiana University (IU), Bloomington, IN, United States
- Indiana University Network Sciences Institute, IU, Bloomington, IN, United States
- Program in Neuroscience, IU, Bloomington, IN, United States
| | - Andrew J. Saykin
- Indiana University Network Sciences Institute, IU, Bloomington, IN, United States
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, United States
- Indiana Alzheimer’s Disease Research Center, IUSM, Indianapolis, IN, United States
- Department of Radiology and Imaging Sciences, IUSM, Indianapolis, IN, United States
- Department of Neurology, IUSM, Indianapolis, IN, United States
| | - Olaf Sporns
- Department of Psychological and Brain Sciences, Indiana University (IU), Bloomington, IN, United States
- Indiana University Network Sciences Institute, IU, Bloomington, IN, United States
- Stark Neurosciences Research Institute, Indiana University School of Medicine (IUSM), Indianapolis, IN, United States
- Indiana Alzheimer’s Disease Research Center, IUSM, Indianapolis, IN, United States
- Program in Neuroscience, IU, Bloomington, IN, United States
- Department of Radiology and Imaging Sciences, IUSM, Indianapolis, IN, United States
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Dang C, Wang Y, Li Q, Lu Y. Neuroimaging modalities in the detection of Alzheimer's disease-associated biomarkers. PSYCHORADIOLOGY 2023; 3:kkad009. [PMID: 38666112 PMCID: PMC11003434 DOI: 10.1093/psyrad/kkad009] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 05/07/2023] [Revised: 06/04/2023] [Accepted: 06/20/2023] [Indexed: 04/28/2024]
Abstract
Alzheimer's disease (AD) is the most common cause of dementia. Neuropathological changes in AD patients occur up to 10-20 years before the emergence of clinical symptoms. Specific diagnosis and appropriate intervention strategies are crucial during the phase of mild cognitive impairment (MCI) and AD. The detection of biomarkers has emerged as a promising tool for tracking the efficacy of potential therapies, making an early disease diagnosis, and prejudging treatment prognosis. Specifically, multiple neuroimaging modalities, including magnetic resonance imaging (MRI), positron emission tomography, optical imaging, and single photon emission-computed tomography, have provided a few potential biomarkers for clinical application. The MRI modalities described in this review include structural MRI, functional MRI, diffusion tensor imaging, magnetic resonance spectroscopy, and arterial spin labelling. These techniques allow the detection of presymptomatic diagnostic biomarkers in the brains of cognitively normal elderly people and might also be used to monitor AD disease progression after the onset of clinical symptoms. This review highlights potential biomarkers, merits, and demerits of different neuroimaging modalities and their clinical value in MCI and AD patients. Further studies are necessary to explore more biomarkers and overcome the limitations of multiple neuroimaging modalities for inclusion in diagnostic criteria for AD.
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Affiliation(s)
- Chun Dang
- Department of Periodical Press, West China Hospital, Sichuan University, Chengdu 610000, China
| | - Yanchao Wang
- Department of Neurology, Chifeng University of Affiliated Hospital, Chifeng 024000, China
| | - Qian Li
- Department of Neurology, the Second Affiliated Hospital of Harbin Medical University, Harbin 150081, China
| | - Yaoheng Lu
- Department of General Surgery, Chengdu Integrated Traditional Chinese Medicine and Western Medicine Hospital, Chengdu 610000, China
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7
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El-Sappagh S, Alonso-Moral JM, Abuhmed T, Ali F, Bugarín-Diz A. Trustworthy artificial intelligence in Alzheimer’s disease: state of the art, opportunities, and challenges. Artif Intell Rev 2023. [DOI: 10.1007/s10462-023-10415-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/28/2023]
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8
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Mavragani A, Michels L, Schmidt A, Barinka F, de Bruin ED. Effectiveness of an Individualized Exergame-Based Motor-Cognitive Training Concept Targeted to Improve Cognitive Functioning in Older Adults With Mild Neurocognitive Disorder: Study Protocol for a Randomized Controlled Trial. JMIR Res Protoc 2023; 12:e41173. [PMID: 36745483 PMCID: PMC9941909 DOI: 10.2196/41173] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2022] [Revised: 11/21/2022] [Accepted: 11/29/2022] [Indexed: 02/07/2023] Open
Abstract
BACKGROUND Simultaneous motor-cognitive training is considered promising for preventing the decline in cognitive functioning in older adults with mild neurocognitive disorder (mNCD) and can be highly motivating when applied in the form of exergaming. The literature points to opportunities for improvement in the application of exergames in individuals with mNCD by developing novel exergames and exergame-based training concepts that are specifically tailored to patients with mNCD and ensuring the implementation of effective training components. OBJECTIVE This study systematically explores the effectiveness of a newly developed exergame-based motor-cognitive training concept (called "Brain-IT") targeted to improve cognitive functioning in older adults with mNCD. METHODS A 2-arm, parallel-group, single-blinded randomized controlled trial with a 1:1 allocation ratio (ie, intervention: control), including 34 to 40 older adults with mNCD will be conducted between May 2022 and December 2023. The control group will proceed with the usual care provided by the (memory) clinics where the patients are recruited. The intervention group will perform a 12-week training intervention according to the "Brain-IT" training concept, in addition to usual care. Global cognitive functioning will be assessed as the primary outcome. As secondary outcomes, domain-specific cognitive functioning, brain structure and function, spatiotemporal parameters of gait, instrumental activities of daily living, psychosocial factors, and resting cardiac vagal modulation will be assessed. Pre- and postintervention measurements will take place within 2 weeks before starting and after completing the intervention. A 2-way analysis of covariance or the Quade nonparametric analysis of covariance will be computed for all primary and secondary outcomes, with the premeasurement value as a covariate for the predicting group factor and the postmeasurement value as the outcome variable. To determine whether the effects are substantive, partial eta-squared (η2p) effect sizes will be calculated for all primary and secondary outcomes. RESULTS Upon the initial submission of this study protocol, 13 patients were contacted by the study team. Four patients were included in the study, 2 were excluded because they were not eligible, and 7 were being informed about the study in detail. Of the 4 included patients, 2 already completed all premeasurements and were in week 2 of the intervention period. Data collection is expected to be completed by December 2023. A manuscript of the results will be submitted for publication in a peer-reviewed open-access journal in 2024. CONCLUSIONS This study contributes to the evidence base in the highly relevant area of preventing disability because of cognitive impairment, which has been declared a public health priority by the World Health Organization. TRIAL REGISTRATION ClinicalTrials.gov NCT05387057; https://clinicaltrials.gov/ct2/show/NCT05387057. INTERNATIONAL REGISTERED REPORT IDENTIFIER (IRRID) DERR1-10.2196/41173.
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Affiliation(s)
| | - Lars Michels
- Department of Neuroradiology, University Hospital Zurich, Zurich, Switzerland
| | - André Schmidt
- Department of Psychiatry, University of Basel, Basel, Switzerland
| | - Filip Barinka
- Clinic for Neurology, Hirslanden Hospital Zurich, Zurich, Switzerland
| | - Eling D de Bruin
- Motor Control and Learning Group - Institute of Human Movement Sciences and Sport, Department of Health Sciences and Technology, ETH Zurich, Zurich, Switzerland.,Department of Neurobiology, Care Sciences and Society, Karolinska Institute, Stockholm, Sweden.,Department of Health, OST - Eastern Swiss University of Applied Sciences, St. Gallen, Switzerland
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9
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Effective Connectivity Evaluation of Resting-State Brain Networks in Alzheimer's Disease, Amnestic Mild Cognitive Impairment, and Normal Aging: An Exploratory Study. Brain Sci 2023; 13:brainsci13020265. [PMID: 36831808 PMCID: PMC9954618 DOI: 10.3390/brainsci13020265] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2022] [Revised: 01/27/2023] [Accepted: 02/01/2023] [Indexed: 02/09/2023] Open
Abstract
(1) Background: Alzheimer's disease (AD) is a neurodegenerative disease with a high prevalence. Despite the cognitive tests to diagnose AD, there are pitfalls in early diagnosis. Brain deposition of pathological markers of AD can affect the direction and intensity of the signaling. The study of effective connectivity allows the evaluation of intensity flow and signaling pathways in functional regions, even in the early stage, known as amnestic mild cognitive impairment (aMCI). (2) Methods: 16 aMCI, 13 AD, and 14 normal subjects were scanned using resting-state fMRI and T1-weighted protocols. After data pre-processing, the signal of the predefined nodes was extracted, and spectral dynamic causal modeling analysis (spDCM) was constructed. Afterward, the mean and standard deviation of the Jacobin matrix of each subject describing effective connectivity was calculated and compared. (3) Results: The maps of effective connectivity in the brain networks of the three groups were different, and the direction and strength of the causal effect with the progression of the disease showed substantial changes. (4) Conclusions: Impaired information flow in the resting-state networks of the aMCI and AD groups was found versus normal groups. Effective connectivity can serve as a potential marker of Alzheimer's pathophysiology, even in the early stages of the disease.
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10
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Cheirdaris DG. Graph Theory-Based Approach in Brain Connectivity Modeling and Alzheimer's Disease Detection. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2023; 1424:49-58. [PMID: 37486478 DOI: 10.1007/978-3-031-31982-2_5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/25/2023]
Abstract
There is strong evidence that the pathological findings of Alzheimer's disease (AD), consisting of accumulated amyloid plaques and neurofibrillary tangles, could spread around the brain through synapses and neural connections of neighboring brain sections. Graph theory is a helpful tool in depicting the complex human brain divided into various regions of interest (ROIs) and the connections among them. Thus, applying graph theory-based models in the study of brain connectivity comes natural in the study of AD propagation mechanisms. Moreover, graph theory-based computational approaches have been lately applied in order to boost data-driven analysis, extract model measures and robustness-effectiveness indexes, and provide insights on casual interactions between regions of interest (ROI), as imposed by the models' architecture.
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Affiliation(s)
- Dionysios G Cheirdaris
- Bioinformatics and Human Electrophysiology Laboratory, Department of Informatics, Ionian University, Corfu, Greece.
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Strain JF, Brier MR, Tanenbaum A, Gordon BA, McCarthy JE, Dincer A, Marcus DS, Chhatwal JP, Graff-Radford NR, Day GS, la Fougère C, Perrin RJ, Salloway S, Schofield PR, Yakushev I, Ikeuchi T, Vöglein J, Morris JC, Benzinger TLS, Bateman RJ, Ances BM, Snyder AZ. Covariance-based vs. correlation-based functional connectivity dissociates healthy aging from Alzheimer disease. Neuroimage 2022; 261:119511. [PMID: 35914670 PMCID: PMC9750733 DOI: 10.1016/j.neuroimage.2022.119511] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2022] [Revised: 07/04/2022] [Accepted: 07/22/2022] [Indexed: 01/05/2023] Open
Abstract
Prior studies of aging and Alzheimer disease have evaluated resting state functional connectivity (FC) using either seed-based correlation (SBC) or independent component analysis (ICA), with a focus on particular functional systems. SBC and ICA both are insensitive to differences in signal amplitude. At the same time, accumulating evidence indicates that the amplitude of spontaneous BOLD signal fluctuations is physiologically meaningful. We systematically compared covariance-based FC, which is sensitive to amplitude, vs. correlation-based FC, which is not, in affected individuals and controls drawn from two cohorts of participants including autosomal dominant Alzheimer disease (ADAD), late onset Alzheimer disease (LOAD), and age-matched controls. Functional connectivity was computed over 222 regions of interest and group differences were evaluated in terms of components projected onto a space of lower dimension. Our principal observations are: (1) Aging is associated with global loss of resting state fMRI signal amplitude that is approximately uniform across resting state networks. (2) Thus, covariance FC measures decrease with age whereas correlation FC is relatively preserved in healthy aging. (3) In contrast, symptomatic ADAD and LOAD both lead to loss of spontaneous activity amplitude as well as severely degraded correlation structure. These results demonstrate a double dissociation between age vs. Alzheimer disease and the amplitude vs. correlation structure of resting state BOLD signals. Modeling results suggest that the AD-associated loss of correlation structure is attributable to a relative increase in the fraction of locally restricted as opposed to widely shared variance.
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Affiliation(s)
- Jeremy F Strain
- Department of Neurology, Washington University in Saint Louis, St. Louis, MO 63110, USA
| | - Matthew R Brier
- Department of Neurology, Washington University in Saint Louis, St. Louis, MO 63110, USA
| | - Aaron Tanenbaum
- Department of Neurology, Washington University in Saint Louis, St. Louis, MO 63110, USA
| | - Brian A Gordon
- Department of Radiology, Washington University in Saint Louis, Box 8225, 660 South Euclid Ave, St. Louis, MO 63110, USA; Knight Alzheimer Disease Research Center, Washington University in St. Louis, St. Louis, MO 63110, USA; Department of Psychological & Brain Sciences, Washington University, St. Louis, MO, USA
| | - John E McCarthy
- Department of Mathematics and Statistics, Washington University, St. Louis, MO 63130, USA
| | - Aylin Dincer
- Department of Radiology, Washington University in Saint Louis, Box 8225, 660 South Euclid Ave, St. Louis, MO 63110, USA
| | - Daniel S Marcus
- Department of Radiology, Washington University in Saint Louis, Box 8225, 660 South Euclid Ave, St. Louis, MO 63110, USA; Knight Alzheimer Disease Research Center, Washington University in St. Louis, St. Louis, MO 63110, USA
| | - Jasmeer P Chhatwal
- Martinos Center, Massachusetts General Hospital, 149 13th St Room 2662, Charlestown, MA 02129, USA
| | - Neill R Graff-Radford
- Department of Neurology, Mayo Clinic Florida, 4500 San Pablo Road, Jacksonville, Fl 32224, USA
| | - Gregory S Day
- Department of Neurology, Mayo Clinic Florida, 4500 San Pablo Road, Jacksonville, Fl 32224, USA
| | - Christian la Fougère
- Department of Nuclear Medicine and Clinical Molecular Imaging, Universityhospital Tübingen, Tübingen, Germany; German Center for Neurodegenerative Diseases (DZNE) Tübingen, Germany
| | - Richard J Perrin
- Department of Neurology, Washington University in Saint Louis, St. Louis, MO 63110, USA; Knight Alzheimer Disease Research Center, Washington University in St. Louis, St. Louis, MO 63110, USA; Hope Center for Neurological Disorders, Washington University in St. Louis, St. Louis, MO 63110, USA; Department of Pathology and Immunology, Washington University in St. Louis, St. Louis, MO 63110, USA
| | - Stephen Salloway
- Alpert Medical School of Brown University, 345 Blackstone Boulevard, Providence, RI 02906, USA
| | - Peter R Schofield
- Neuroscience Research Australia, Sydney, NSW 2131, Australia; School of Medical Sciences, University of New South Wales, Sydney, NSW 2052, Australia
| | - Igor Yakushev
- Department of Nuclear Medicine, Klinikum Rechts der Isar, School of Medicine, Technical University of Munich, Ismaninger Str. 22, Munich 81675, Germany
| | - Takeshi Ikeuchi
- Department of Molecular Genetics, Brain Research Institute, Niigata University, Japan
| | - Jonathan Vöglein
- Department of Neurology, Ludwig-Maximilians-Universität Munich, Germany
| | - John C Morris
- Department of Neurology, Washington University in Saint Louis, St. Louis, MO 63110, USA; Knight Alzheimer Disease Research Center, Washington University in St. Louis, St. Louis, MO 63110, USA
| | - Tammie L S Benzinger
- Department of Radiology, Washington University in Saint Louis, Box 8225, 660 South Euclid Ave, St. Louis, MO 63110, USA; Knight Alzheimer Disease Research Center, Washington University in St. Louis, St. Louis, MO 63110, USA
| | - Randall J Bateman
- Department of Neurology, Washington University in Saint Louis, St. Louis, MO 63110, USA; Knight Alzheimer Disease Research Center, Washington University in St. Louis, St. Louis, MO 63110, USA; Hope Center for Neurological Disorders, Washington University in St. Louis, St. Louis, MO 63110, USA
| | - Beau M Ances
- Department of Neurology, Washington University in Saint Louis, St. Louis, MO 63110, USA; Department of Radiology, Washington University in Saint Louis, Box 8225, 660 South Euclid Ave, St. Louis, MO 63110, USA; Hope Center for Neurological Disorders, Washington University in St. Louis, St. Louis, MO 63110, USA
| | - Abraham Z Snyder
- Department of Neurology, Washington University in Saint Louis, St. Louis, MO 63110, USA; Department of Radiology, Washington University in Saint Louis, Box 8225, 660 South Euclid Ave, St. Louis, MO 63110, USA.
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El-Sappagh S, Saleh H, Ali F, Amer E, Abuhmed T. Two-stage deep learning model for Alzheimer’s disease detection and prediction of the mild cognitive impairment time. Neural Comput Appl 2022. [DOI: 10.1007/s00521-022-07263-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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13
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Abnormal EEG Signal Energy in the Elderly: A Wavelet Analysis of Event-related Potentials During a Stroop Task. J Neurosci Methods 2022; 376:109608. [PMID: 35487316 DOI: 10.1016/j.jneumeth.2022.109608] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2021] [Revised: 01/17/2022] [Accepted: 04/21/2022] [Indexed: 11/23/2022]
Abstract
BACKGROUND Previous work showed that elderly with excess in theta activity in their resting state electroencephalogram (EEG) are at higher risk of cognitive decline than those with a normal EEG. By using event-related potentials (ERP) during a counting Stroop task, our prior work showed that elderly with theta excess have a large P300 component compared with normal EEG group. This increased activity could be related to a higher EEG signal energy used during this task. NEW METHOD By wavelet analysis applied to ERP obtained during a counting Stroop task we quantified the energy in the different frequency bands of a group of elderly with altered EEG. RESULTS In theta and alpha bands, the total energy was higher in elderly subjects with theta excess, specifically in the stimulus categorization window (258-516 ms). Both groups solved the task with similar efficiency. COMPARISON WITH EXISTING METHODS The traditional ERP analysis in elderly compares voltage among conditions and groups for a given time windows, while the frequency composition is not usually examined. We complemented our previous ERP analysis using a wavelet methodology. Furthermore, we showed the advantages of wavelet analysis over Short Time Fourier Transform when exploring EEG signal during this task. CONCLUSIONS The higher EEG signal energy in ERP might reflect undergoing neurobiological mechanisms that allow the elderly with theta excess to cope with the cognitive task with similar behavioral results as the normal EEG group. This increased energy could promote a metabolic and cellular dysregulation causing a greater decline in cognitive function.
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Qu C, Zou Y, Ma Y, Chen Q, Luo J, Fan H, Jia Z, Gong Q, Chen T. Diagnostic Performance of Generative Adversarial Network-Based Deep Learning Methods for Alzheimer’s Disease: A Systematic Review and Meta-Analysis. Front Aging Neurosci 2022; 14:841696. [PMID: 35527734 PMCID: PMC9068970 DOI: 10.3389/fnagi.2022.841696] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2021] [Accepted: 03/03/2022] [Indexed: 12/28/2022] Open
Abstract
Alzheimer’s disease (AD) is the most common form of dementia. Currently, only symptomatic management is available, and early diagnosis and intervention are crucial for AD treatment. As a recent deep learning strategy, generative adversarial networks (GANs) are expected to benefit AD diagnosis, but their performance remains to be verified. This study provided a systematic review on the application of the GAN-based deep learning method in the diagnosis of AD and conducted a meta-analysis to evaluate its diagnostic performance. A search of the following electronic databases was performed by two researchers independently in August 2021: MEDLINE (PubMed), Cochrane Library, EMBASE, and Web of Science. The Quality Assessment of Diagnostic Accuracy Studies-2 (QUADAS-2) tool was applied to assess the quality of the included studies. The accuracy of the model applied in the diagnosis of AD was determined by calculating odds ratios (ORs) with 95% confidence intervals (CIs). A bivariate random-effects model was used to calculate the pooled sensitivity and specificity with their 95% CIs. Fourteen studies were included, 11 of which were included in the meta-analysis. The overall quality of the included studies was high according to the QUADAS-2 assessment. For the AD vs. cognitively normal (CN) classification, the GAN-based deep learning method exhibited better performance than the non-GAN method, with significantly higher accuracy (OR 1.425, 95% CI: 1.150–1.766, P = 0.001), pooled sensitivity (0.88 vs. 0.83), pooled specificity (0.93 vs. 0.89), and area under the curve (AUC) of the summary receiver operating characteristic curve (SROC) (0.96 vs. 0.93). For the progressing MCI (pMCI) vs. stable MCI (sMCI) classification, the GAN method exhibited no significant increase in the accuracy (OR 1.149, 95% CI: 0.878–1.505, P = 0.310) or the pooled sensitivity (0.66 vs. 0.66). The pooled specificity and AUC of the SROC in the GAN group were slightly higher than those in the non-GAN group (0.81 vs. 0.78 and 0.81 vs. 0.80, respectively). The present results suggested that the GAN-based deep learning method performed well in the task of AD vs. CN classification. However, the diagnostic performance of GAN in the task of pMCI vs. sMCI classification needs to be improved. Systematic Review Registration: [PROSPERO], Identifier: [CRD42021275294].
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Affiliation(s)
- Changxing Qu
- Huaxi MR Research Center (HMRRC), Department of Radiology, West China Hospital, Sichuan University, Chengdu, China
- State Key Laboratory of Oral Diseases, National Clinical Research Center for Oral Diseases, West China School of Stomatology, Sichuan University, Chengdu, China
| | - Yinxi Zou
- Huaxi MR Research Center (HMRRC), Department of Radiology, West China Hospital, Sichuan University, Chengdu, China
- West China School of Medicine, Sichuan University, Chengdu, China
| | - Yingqiao Ma
- Huaxi MR Research Center (HMRRC), Department of Radiology, West China Hospital, Sichuan University, Chengdu, China
| | - Qin Chen
- Department of Neurology, West China Hospital, Sichuan University, Chengdu, China
| | - Jiawei Luo
- West China Biomedical Big Data Center, West China Clinical Medical College of Sichuan University, Chengdu, China
| | - Huiyong Fan
- College of Education Science, Bohai University, Jinzhou, China
| | - Zhiyun Jia
- Huaxi MR Research Center (HMRRC), Department of Radiology, West China Hospital, Sichuan University, Chengdu, China
| | - Qiyong Gong
- Huaxi MR Research Center (HMRRC), Department of Radiology, West China Hospital, Sichuan University, Chengdu, China
- Department of Radiology, West China Xiamen Hospital of Sichuan University, Xiamen, China
- Qiyong Gong,
| | - Taolin Chen
- Huaxi MR Research Center (HMRRC), Department of Radiology, West China Hospital, Sichuan University, Chengdu, China
- Research Unit of Psychoradiology, Chinese Academy of Medical Sciences, Chengdu, China
- Functional and Molecular Imaging Key Laboratory of Sichuan Province, Department of Radiology, West China Hospital of Sichuan University, Chengdu, China
- *Correspondence: Taolin Chen,
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Enhanced Fuzzy Elephant Herding Optimization-Based OTSU Segmentation and Deep Learning for Alzheimer’s Disease Diagnosis. MATHEMATICS 2022. [DOI: 10.3390/math10081259] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Several neurological illnesses and diseased sites have been studied, along with the anatomical framework of the brain, using structural MRI (sMRI). It is critical to diagnose Alzheimer’s disease (AD) patients in a timely manner to implement preventative treatments. The segmentation of brain anatomy and categorization of AD have received increased attention since they can deliver good findings spanning a vast range of information. The first research gap considered in this work is the real-time efficiency of OTSU segmentation, which is not high, despite its simplicity and good accuracy. A second issue is that feature extraction could be automated by implementing deep learning techniques. To improve picture segmentation’s real-timeliness, enhanced fuzzy elephant herding optimization (EFEHO) was used for OTSU segmentation, and named EFEHO-OTSU. The main contribution of this work is twofold. One is utilizing EFEHO in the recommended technique to seek the optimal segmentation threshold for the OTSU method. Second, dual attention multi-instance deep learning network (DA-MIDL) is recommended for the timely diagnosis of AD and its prodromal phase, mild cognitive impairment (MCI). Tests show that this technique converges faster and takes less time than the classic OTSU approach without reducing segmentation performance. This study develops a valuable tool for quick picture segmentation with good real-time efficiency. Compared to numerous conventional techniques, the suggested study attains improved categorization performance regarding accuracy and transferability.
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Yuan G, Zheng Y, Wang Y, Qi X, Wang R, Ma Z, Guo X, Wang X, Zhang J. Multiscale entropy and small-world network analysis in rs-fMRI - new tools to evaluate early basal ganglia dysfunction in diabetic peripheral neuropathy. Front Endocrinol (Lausanne) 2022; 13:974254. [PMID: 36407323 PMCID: PMC9672501 DOI: 10.3389/fendo.2022.974254] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/21/2022] [Accepted: 10/04/2022] [Indexed: 11/06/2022] Open
Abstract
OBJECTIVE The risk of falling increases in diabetic peripheral neuropathy (DPN) patients. As a central part, Basal ganglia play an important role in motor and balance control, but whether its involvement in DPN is unclear. METHODS Ten patients with confirmed DPN, ten diabetes patients without DPN, and ten healthy age-matched controls(HC) were recruited to undergo magnetic resonance imaging(MRI) to assess brain structure and zone adaptability. Multiscale entropy and small-world network analysis were then used to assess the complexity of the hemodynamic response signal, reflecting the adaptability of the basal ganglia. RESULTS There was no significant difference in brain structure among the three groups, except the duration of diabetes in DPN patients was longer (p < 0.05). The complexity of basal ganglia was significantly decreased in the DPN group compared with the non-DPN and HC group (p < 0.05), which suggested their poor adaptability. CONCLUSION In the sensorimotor loop, peripheral and early central nervous lesions exist simultaneously in DPN patients. Multiscale Entropy and Small-world Network Analysis could detect basal ganglia dysfunction prior to structural changes in MRI, potentially valuable tools for early non-invasive screening and follow-up.
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Affiliation(s)
- Geheng Yuan
- Department of Endocrinology, Peking University First Hospital, Beijing, China
| | - Yijia Zheng
- Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, China
| | - Ye Wang
- Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, China
- State Key Laboratory of Media Convergence and Communication, Communication University of China, Beijing, China
- Neuroscience and Intelligent Media Institute, Communication University of China, Beijing, China
| | - Xin Qi
- Department of Plastic Surgery & Burns, Peking University First Hospital, Beijing, China
| | - Rui Wang
- Department of Radiology, Peking University First Hospital, Beijing, China
| | - Zhanyang Ma
- Department of Endocrinology, Peking University First Hospital, Beijing, China
| | - Xiaohui Guo
- Department of Endocrinology, Peking University First Hospital, Beijing, China
| | - Xiaoying Wang
- Department of Radiology, Peking University First Hospital, Beijing, China
| | - Jue Zhang
- Academy for Advanced Interdisciplinary Studies, Peking University, Beijing, China
- College of Engineering, Peking University, Beijing, China
- *Correspondence: Jue Zhang, ;
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17
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Zhou Y, Song Z, Han X, Li H, Tang X. Prediction of Alzheimer's Disease Progression Based on Magnetic Resonance Imaging. ACS Chem Neurosci 2021; 12:4209-4223. [PMID: 34723463 DOI: 10.1021/acschemneuro.1c00472] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022] Open
Abstract
The neuroimaging method of multimodal magnetic resonance imaging (MRI) can identify the changes in brain structure and function caused by Alzheimer's disease (AD) at different stages, and it is a practical method to study the mechanism of AD progression. This paper reviews the studies of methods and biomarkers for predicting AD progression based on multimodal MRI. First, different approaches for predicting AD progression are analyzed and summarized, including machine learning, deep learning, regression, and other MRI analysis methods. Then, the effective biomarkers of AD progression under structural magnetic resonance imaging, diffusion tensor imaging, functional magnetic resonance imaging, and arterial spin labeling modes of MRI are summarized. It is believed that the brain changes shown on MRI may be related to the cognitive decline in different prodrome stages of AD, which is conducive to the further realization of early intervention and prevention of AD. Finally, the deficiencies of the existing studies are analyzed in terms of data set size, data heterogeneity, processing methods, and research depth. More importantly, future research directions are proposed, including enriching data sets, simplifying biomarkers, utilizing multimodal magnetic resonance, etc. In the future, the study of AD progression by multimodal MRI will still be a challenge but also a significant research hotspot.
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Affiliation(s)
- Ying Zhou
- School of Life Science, Beijing Institute of Technology, 5 South Zhongguancun Street, Beijing 100081, P.R. China
| | - Zeyu Song
- School of Life Science, Beijing Institute of Technology, 5 South Zhongguancun Street, Beijing 100081, P.R. China
| | - Xiao Han
- School of Life Science, Beijing Institute of Technology, 5 South Zhongguancun Street, Beijing 100081, P.R. China
| | - Hanjun Li
- School of Life Science, Beijing Institute of Technology, 5 South Zhongguancun Street, Beijing 100081, P.R. China
| | - Xiaoying Tang
- School of Life Science, Beijing Institute of Technology, 5 South Zhongguancun Street, Beijing 100081, P.R. China
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18
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Yao W, Chen H, Sheng X, Zhao H, Xu Y, Bai F. Core-Centered Connection Abnormalities Associated with Pathological Features Mediate the Progress of Cognitive Impairments in Alzheimer's Disease Spectrum Patients. J Alzheimers Dis 2021; 82:1499-1511. [PMID: 34180417 DOI: 10.3233/jad-210481] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
BACKGROUND Abnormal default mode network (DMN) was associated with the progress of Alzheimer's disease (AD). Rather than treat the DMN as a unitary network, it can be further divided into three subsystems with different functions. OBJECTIVE It remains unclear the interactions of DMN subsystems associated with the progress of cognitive impairments and AD pathological features. METHODS This study has recruited 187 participants, including test data and verification data. Firstly, an imaging analysis approach was utilized to investigate disease-related differences in the interactions of DMN subsystems in test data (n = 149), including 42 cognitively normal subjects, 43 early mild cognitive impairment (EMCI), 32 late mild cognitive impairment (LMCI), and 32 AD patients. Brain-behavior-pathological relationships regarding to the interactions among DMN subsystems were then further examined. Secondly, DMN subsystems abnormalities for classifying AD spectrum population in the independent verification data (n = 38). RESULTS This study found that the impaired cognition relates to disturbances in the interactions between DMN subsystems but preferentially in core subsystem, and the abnormal regulatory processes of core subsystem were significantly associated with the levels of cerebrospinal fluid Aβ and tau in AD-spectrum patients. Meantime, the nonlinear relationship between dysfunctional core subsystem and impaired cognition was observed as one progresses through the stages of MCI to AD. Importantly, this classification presented a higher sensitivity and specificity dependent on the core-centered connection abnormalities. CONCLUSION The abnormal interaction patterns of DMN subsystems at an early stage of AD appeared and presented as core-centered connection abnormalities, which were the potential neuroimaging features for monitoring the development of AD.
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Affiliation(s)
- Weina Yao
- Department of Neurology, Nanjing Drum Tower Hospital Clinical College of Traditional Chinese and Western Medicine, Nanjing University of Chinese Medicine, Nanjing, China
| | - Haifeng Chen
- Department of Neurology, Nanjing Drum Tower Hospital of The Affiliated Hospital of Nanjing University Medical School, Nanjing University, Nanjing, China.,The State Key Laboratory of Pharmaceutical Biotechnology, Institute of Brain Science, Nanjing University, Nanjing, China.,Jiangsu Province Stroke Center for Diagnosis and Therapy, Nanjing, China.,Nanjing Neuropsychiatry Clinic Medical Center, Nanjing, China
| | - Xiaoning Sheng
- Department of Neurology, Nanjing Drum Tower Hospital of The Affiliated Hospital of Nanjing University Medical School, Nanjing University, Nanjing, China.,The State Key Laboratory of Pharmaceutical Biotechnology, Institute of Brain Science, Nanjing University, Nanjing, China
| | - Hui Zhao
- Department of Neurology, Nanjing Drum Tower Hospital of The Affiliated Hospital of Nanjing University Medical School, Nanjing University, Nanjing, China.,The State Key Laboratory of Pharmaceutical Biotechnology, Institute of Brain Science, Nanjing University, Nanjing, China.,Jiangsu Province Stroke Center for Diagnosis and Therapy, Nanjing, China.,Nanjing Neuropsychiatry Clinic Medical Center, Nanjing, China
| | - Yun Xu
- Department of Neurology, Nanjing Drum Tower Hospital of The Affiliated Hospital of Nanjing University Medical School, Nanjing University, Nanjing, China.,The State Key Laboratory of Pharmaceutical Biotechnology, Institute of Brain Science, Nanjing University, Nanjing, China.,Jiangsu Province Stroke Center for Diagnosis and Therapy, Nanjing, China.,Nanjing Neuropsychiatry Clinic Medical Center, Nanjing, China
| | - Feng Bai
- Department of Neurology, Nanjing Drum Tower Hospital of The Affiliated Hospital of Nanjing University Medical School, Nanjing University, Nanjing, China.,The State Key Laboratory of Pharmaceutical Biotechnology, Institute of Brain Science, Nanjing University, Nanjing, China.,Jiangsu Province Stroke Center for Diagnosis and Therapy, Nanjing, China.,Nanjing Neuropsychiatry Clinic Medical Center, Nanjing, China
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Takao H, Amemiya S, Abe O. Longitudinal stability of resting-state networks in normal aging, mild cognitive impairment, and Alzheimer's disease. Magn Reson Imaging 2021; 82:55-73. [PMID: 34153437 DOI: 10.1016/j.mri.2021.06.020] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2020] [Revised: 06/16/2021] [Accepted: 06/16/2021] [Indexed: 11/18/2022]
Abstract
Test-retest reliability is essential for using resting-state functional magnetic resonance imaging (rs-fMRI) as a potential biomarker for Alzheimer's disease (AD), especially when monitoring longitudinal changes and treatment effects. In addition, test-retest variability itself might represent a feature of AD. Using 3.0 T rs-fMRI data from the Alzheimer's Disease Neuroimaging Initiative (ADNI) database, we examined the long-term (1-year) test-retest reliability of resting-state networks (RSNs) in 31 healthy elderly subjects, 63 patients with mild cognitive impairment (MCI), and 17 patients with AD by applying temporal concatenation group independent component analysis and dual regression. The intraclass correlation coefficient estimates of RSN amplitudes ranged from 0.44 to 0.77 in healthy elderly subjects, from 0.31 to 0.62 in patients with MCI, and from -0.06 to 0.44 in patients with AD. The overall test-retest reliability of RSNs was lower in patients with MCI than in healthy elderly subjects, and was lower in patients with AD than in patients with MCI. The differences in the test-retest reliabilities were due to the RSN amplitudes rather than the RSN shapes. Head motion was not significantly different among the three groups of subjects. The results indicate that the test-retest stability of RSNs generally declines with progression to MCI and AD, mainly due to the RSN amplitudes rather than the RSN shapes. The test-retest instability in MCI and AD may reflect progressive neurofunctional alterations related to the pathology of AD.
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Affiliation(s)
- Hidemasa Takao
- Department of Radiology, Graduate School of Medicine, University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan.
| | - Shiori Amemiya
- Department of Radiology, Graduate School of Medicine, University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan
| | - Osamu Abe
- Department of Radiology, Graduate School of Medicine, University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8655, Japan
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Zhang YD, Dong Z, Wang SH, Yu X, Yao X, Zhou Q, Hu H, Li M, Jiménez-Mesa C, Ramirez J, Martinez FJ, Gorriz JM. Advances in multimodal data fusion in neuroimaging: Overview, challenges, and novel orientation. AN INTERNATIONAL JOURNAL ON INFORMATION FUSION 2020; 64:149-187. [PMID: 32834795 PMCID: PMC7366126 DOI: 10.1016/j.inffus.2020.07.006] [Citation(s) in RCA: 111] [Impact Index Per Article: 27.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2020] [Revised: 07/06/2020] [Accepted: 07/14/2020] [Indexed: 05/13/2023]
Abstract
Multimodal fusion in neuroimaging combines data from multiple imaging modalities to overcome the fundamental limitations of individual modalities. Neuroimaging fusion can achieve higher temporal and spatial resolution, enhance contrast, correct imaging distortions, and bridge physiological and cognitive information. In this study, we analyzed over 450 references from PubMed, Google Scholar, IEEE, ScienceDirect, Web of Science, and various sources published from 1978 to 2020. We provide a review that encompasses (1) an overview of current challenges in multimodal fusion (2) the current medical applications of fusion for specific neurological diseases, (3) strengths and limitations of available imaging modalities, (4) fundamental fusion rules, (5) fusion quality assessment methods, and (6) the applications of fusion for atlas-based segmentation and quantification. Overall, multimodal fusion shows significant benefits in clinical diagnosis and neuroscience research. Widespread education and further research amongst engineers, researchers and clinicians will benefit the field of multimodal neuroimaging.
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Affiliation(s)
- Yu-Dong Zhang
- School of Informatics, University of Leicester, Leicester, LE1 7RH, Leicestershire, UK
- Department of Information Systems, Faculty of Computing and Information Technology, King Abdulaziz University, Jeddah 21589, Saudi Arabia
| | - Zhengchao Dong
- Department of Psychiatry, Columbia University, USA
- New York State Psychiatric Institute, New York, NY 10032, USA
| | - Shui-Hua Wang
- Department of Information Systems, Faculty of Computing and Information Technology, King Abdulaziz University, Jeddah 21589, Saudi Arabia
- School of Architecture Building and Civil engineering, Loughborough University, Loughborough, LE11 3TU, UK
- School of Mathematics and Actuarial Science, University of Leicester, LE1 7RH, UK
| | - Xiang Yu
- School of Informatics, University of Leicester, Leicester, LE1 7RH, Leicestershire, UK
| | - Xujing Yao
- School of Informatics, University of Leicester, Leicester, LE1 7RH, Leicestershire, UK
| | - Qinghua Zhou
- School of Informatics, University of Leicester, Leicester, LE1 7RH, Leicestershire, UK
| | - Hua Hu
- Department of Psychiatry, Columbia University, USA
- Department of Neurology, The Second Affiliated Hospital of Soochow University, China
| | - Min Li
- Department of Psychiatry, Columbia University, USA
- School of Internet of Things, Hohai University, Changzhou, China
| | - Carmen Jiménez-Mesa
- Department of Signal Theory, Networking and Communications, University of Granada, Granada, Spain
| | - Javier Ramirez
- Department of Signal Theory, Networking and Communications, University of Granada, Granada, Spain
| | - Francisco J Martinez
- Department of Signal Theory, Networking and Communications, University of Granada, Granada, Spain
| | - Juan Manuel Gorriz
- Department of Signal Theory, Networking and Communications, University of Granada, Granada, Spain
- Department of Psychiatry, University of Cambridge, Cambridge CB21TN, UK
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Trujillo Villarreal LA, Cárdenas-Tueme M, Maldonado-Ruiz R, Reséndez-Pérez D, Camacho-Morales A. Potential role of primed microglia during obesity on the mesocorticolimbic circuit in autism spectrum disorder. J Neurochem 2020; 156:415-434. [PMID: 32902852 DOI: 10.1111/jnc.15141] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2020] [Revised: 07/12/2020] [Accepted: 07/27/2020] [Indexed: 12/19/2022]
Abstract
Autism spectrum disorder (ASD) is a complex neurodevelopmental disease which involves functional and structural defects in selective central nervous system (CNS) regions that harm function and individual ability to process and respond to external stimuli. Individuals with ASD spend less time engaging in social interaction compared to non-affected subjects. Studies employing structural and functional magnetic resonance imaging reported morphological and functional abnormalities in the connectivity of the mesocorticolimbic reward pathway between the nucleus accumbens and the ventral tegmental area (VTA) in response to social stimuli, as well as diminished medial prefrontal cortex in response to visual cues, whereas stronger reward system responses for the non-social realm (e.g., video games) than social rewards (e.g., approval), associated with caudate nucleus responsiveness in ASD children. Defects in the mesocorticolimbic reward pathway have been modulated in transgenic murine models using D2 dopamine receptor heterozygous (D2+/-) or dopamine transporter knockout mice, which exhibit sociability deficits and repetitive behaviors observed in ASD phenotypes. Notably, the mesocorticolimbic reward pathway is modulated by systemic and central inflammation, such as primed microglia, which occurs during obesity or maternal overnutrition. Therefore, we propose that a positive energy balance during obesity/maternal overnutrition coordinates a systemic and central inflammatory crosstalk that modulates the dopaminergic neurotransmission in selective brain areas of the mesocorticolimbic reward pathway. Here, we will describe how obesity/maternal overnutrition may prime microglia, causing abnormalities in dopamine neurotransmission of the mesocorticolimbic reward pathway, postulating a possible immune role in the development of ASD.
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Affiliation(s)
- Luis A- Trujillo Villarreal
- Departamento de Bioquímica, Facultad de Medicina, Universidad Autónoma de Nuevo León, San Nicolas de los Garza, México.,Unidad de Neurometabolismo, Centro de Investigación y Desarrollo en Ciencias de la Salud, Universidad Autónoma de Nuevo León, San Nicolas de los Garza, México
| | - Marcela Cárdenas-Tueme
- Departamento de Biología Celular y Genética, Facultad de Ciencias Biológicas, Universidad Autónoma de Nuevo León, San Nicolas de los Garza, México
| | - Roger Maldonado-Ruiz
- Departamento de Bioquímica, Facultad de Medicina, Universidad Autónoma de Nuevo León, San Nicolas de los Garza, México.,Unidad de Neurometabolismo, Centro de Investigación y Desarrollo en Ciencias de la Salud, Universidad Autónoma de Nuevo León, San Nicolas de los Garza, México
| | - Diana Reséndez-Pérez
- Departamento de Biología Celular y Genética, Facultad de Ciencias Biológicas, Universidad Autónoma de Nuevo León, San Nicolas de los Garza, México
| | - Alberto Camacho-Morales
- Departamento de Bioquímica, Facultad de Medicina, Universidad Autónoma de Nuevo León, San Nicolas de los Garza, México.,Unidad de Neurometabolismo, Centro de Investigación y Desarrollo en Ciencias de la Salud, Universidad Autónoma de Nuevo León, San Nicolas de los Garza, México
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22
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Forouzannezhad P, Abbaspour A, Li C, Fang C, Williams U, Cabrerizo M, Barreto A, Andrian J, Rishe N, Curiel RE, Loewenstein D, Duara R, Adjouadi M. A Gaussian-based model for early detection of mild cognitive impairment using multimodal neuroimaging. J Neurosci Methods 2020; 333:108544. [PMID: 31838182 PMCID: PMC11163390 DOI: 10.1016/j.jneumeth.2019.108544] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2018] [Revised: 11/26/2019] [Accepted: 12/05/2019] [Indexed: 12/14/2022]
Abstract
BACKGROUND Diagnosis of early mild cognitive impairment (EMCI) as a prodromal stage of Alzheimer's disease (AD) with its delineation from the cognitively normal (CN) group remains a challenging but essential step for the planning of early treatment. Although several studies have focused on the MCI diagnosis, this study introduces the early stage of MCI to assess more thoroughly the earliest signs of disease manifestation and progression. NEW METHOD We used random forest feature selection model with a Gaussian-based algorithm to perform method evaluation. This integrated method serves to define multivariate normal distributions in order to classify different stages of AD, with the focus placed on detecting EMCI subjects in the most challenging classification of CN vs. EMCI. RESULTS Using 896 participants classified into the four categories of CN, EMCI, late mild cognitive impairment (LMCI) and AD, the results show that the EMCI group can be delineated from the CN group with a relatively high accuracy of 78.8% and sensitivity of 81.3%. COMPARISON WITH EXISTING METHOD(S) The feature selection model and classifier are compared with some other prominent algorithms. Although higher accuracy has been achieved using the Gaussian process (GP) model (78.8%) over the SVM classifier (75.6%) for CN vs. EMCI classification, with 0.05 being the cutoff for significance, and based on student's t-test, it was determined that the differences for accuracy, sensitivity, specificity between the GP method and support vector machine (SVM) are not statistically significant. CONCLUSION Addressing the challenging classification of CN vs. EMCI provides useful information to help clinicians and researchers determine essential measures that can help in the early detection of AD.
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Affiliation(s)
- Parisa Forouzannezhad
- Department of Electrical and Computer Engineering, Florida International University, Miami, FL, USA
| | - Alireza Abbaspour
- Department of Electrical and Computer Engineering, Florida International University, Miami, FL, USA
| | - Chunfei Li
- Department of Electrical and Computer Engineering, Florida International University, Miami, FL, USA
| | - Chen Fang
- Department of Electrical and Computer Engineering, Florida International University, Miami, FL, USA
| | - Ulyana Williams
- Department of Electrical and Computer Engineering, Florida International University, Miami, FL, USA
| | - Mercedes Cabrerizo
- Department of Electrical and Computer Engineering, Florida International University, Miami, FL, USA
| | - Armando Barreto
- Department of Electrical and Computer Engineering, Florida International University, Miami, FL, USA
| | - Jean Andrian
- Department of Electrical and Computer Engineering, Florida International University, Miami, FL, USA
| | - Naphtali Rishe
- School of Computing and Information Sciences, Florida International University, Miami, FL, USA
| | - Rosie E Curiel
- Center for Cognitive Neuroscience and Aging, Department of Psychiatry and Behavioral Sciences, University of Miami School of Medicine, Miami, FL, USA; 1Florida Alzheimer's Disease Research Center (ADRC), University of Florida, Gainesville, FL, USA
| | - David Loewenstein
- Center for Cognitive Neuroscience and Aging, Department of Psychiatry and Behavioral Sciences, University of Miami School of Medicine, Miami, FL, USA; 1Florida Alzheimer's Disease Research Center (ADRC), University of Florida, Gainesville, FL, USA; Wien Center for Alzheimer's Disease and Memory Disorders, Mount Sinai Medical Center, Miami Beach, FL, USA
| | - Ranjan Duara
- 1Florida Alzheimer's Disease Research Center (ADRC), University of Florida, Gainesville, FL, USA; Wien Center for Alzheimer's Disease and Memory Disorders, Mount Sinai Medical Center, Miami Beach, FL, USA
| | - Malek Adjouadi
- Department of Electrical and Computer Engineering, Florida International University, Miami, FL, USA; 1Florida Alzheimer's Disease Research Center (ADRC), University of Florida, Gainesville, FL, USA
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23
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Zhang T, Zhao Z, Zhang C, Zhang J, Jin Z, Li L. Classification of Early and Late Mild Cognitive Impairment Using Functional Brain Network of Resting-State fMRI. Front Psychiatry 2019; 10:572. [PMID: 31555157 PMCID: PMC6727827 DOI: 10.3389/fpsyt.2019.00572] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/05/2019] [Accepted: 07/22/2019] [Indexed: 01/25/2023] Open
Abstract
Using the Pearson correlation coefficient to constructing functional brain network has been evidenced to be an effective means to diagnose different stages of mild cognitive impairment (MCI) disease. In this study, we investigated the efficacy of a classification framework to distinguish early mild cognitive impairment (EMCI) from late mild cognitive impairment (LMCI) by using the effective features derived from functional brain network of three frequency bands (full-band: 0.01-0.08 Hz; slow-4: 0.027-0.08 Hz; slow-5: 0.01-0.027 Hz) at Rest. Graphic theory was performed to calculate and analyze the relationship between changes in network connectivity. Subsequently, three different algorithms [minimal redundancy maximal relevance (mRMR), sparse linear regression feature selection algorithm based on stationary selection (SS-LR), and Fisher Score (FS)] were applied to select the features of network attributes, respectively. Finally, we used the support vector machine (SVM) with nested cross validation to classify the samples into two categories to obtain unbiased results. Our results showed that the global efficiency, the local efficiency, and the average clustering coefficient were significantly higher in the slow-5 band for the LMCI-EMCI comparison, while the characteristic path length was significantly longer under most threshold values. The classification results showed that the features selected by the mRMR algorithm have higher classification performance than those selected by the SS-LR and FS algorithms. The classification results obtained by using mRMR algorithm in slow-5 band are the best, with 83.87% accuracy (ACC), 86.21% sensitivity (SEN), 81.21% specificity (SPE), and the area under receiver operating characteristic curve (AUC) of 0.905. The present results suggest that the method we proposed could effectively help diagnose MCI disease in clinic and predict its conversion to Alzheimer's disease at an early stage.
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Affiliation(s)
| | | | | | | | | | - Ling Li
- MOE Key Lab for Neuroinformation, High-Field Magnetic Resonance Brain Imaging Key Laboratory of Sichuan Province, Center for Psychiatry and Psychology, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, China
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