Life-history implications of the allometric scaling of growth

Metabolic loads and the costs of metazoan reproduction

Reproduction includes two energy investments-the energy in the offspring and the energy expended to make them. The former is well understood, whereas the latter is unquantified but often assumed to be small. Without understanding both investments, the true energy costs of reproduction are unknown. We present a framework for estimating the total energy costs of reproduction by combining data on the energy content of offspring (direct costs) and the metabolic load of bearing them (indirect costs). We find that direct costs typically represent the smaller fraction of the energy expended on reproduction. Mammals pay the highest reproductive costs (excluding lactation), ~90% of which are indirect. Ectotherms expend less on reproduction overall, and live-bearing ectotherms pay higher indirect costs compared with egg-layers. We show that the energy demands of reproduction exceed standard assumptions.

Effect of Feeding Level on Growth and Slaughter Performance, and Allometric Growth of Tissues and Organs in Female Growing Saanen Dairy Goats

This study aimed to investigate the effect of feeding level on the growth and slaughter performance, and allometric growth of tissues and organs in female growing dairy goats. The trial included 10-20 and 20-30 kg weight stages with 48 female goat kids. The 24 goat kids in each stage were divided into 8 blocks based on weight, with 3 kids per block. Then, three kids from each block were randomly assigned to one of the three treatments, namely ad libitum (AL100), 70% of ad libitum (AL70), or 40% of ad libitum (AL40). The slaughter trial was conducted when the AL100 kids reached the target weight of 20 or 30 kg. The results showed that the ADG and feed conversion rate showed a linear decline as the feed level decreased (p < 0.05). Compared with the AL70 and AL100 groups, the AL40 group exhibited lower shrunk body weight, empty body weight, hot carcass weight, net meat rate, carcass meat rate, and visceral fat weight (p < 0.05) in both stages. Moreover, the AL40 group showed lower weights for skin and mohair, blood, rumen, small intestine, large intestine, mammary gland, and uterus than the AL70 and AL100 groups (p < 0.05) in both stages. However, feeding level did not affect organ indices in the two stages (p > 0.05). The bone, skin and mohair were isometric (b ≈ 1), but the muscle, visceral fat, and most internal organs were positive (b > 1) in both stages. In conclusion, feeding level affects the growth and development of dairy goats, which vary depending on the body weight stage and specific tissues and organs.

Principled, practical, flexible, fast: a new approach to phylogenetic factor analysis

Biological phenotypes are products of complex evolutionary processes in which selective forces influence multiple biological trait measurements in unknown ways. Phylogenetic comparative methods seek to disentangle these relationships across the evolutionary history of a group of organisms. Unfortunately, most existing methods fail to accommodate high-dimensional data with dozens or even thousands of observations per taxon. Phylogenetic factor analysis offers a solution to the challenge of dimensionality. However, scientists seeking to employ this modeling framework confront numerous modeling and implementation decisions, the details of which pose computational and replicability challenges.We develop new inference techniques that increase both the computational efficiency and modeling flexibility of phylogenetic factor analysis. To facilitate adoption of these new methods, we present a practical analysis plan that guides researchers through the web of complex modeling decisions. We codify this analysis plan in an automated pipeline that distills the potentially overwhelming array of decisions into a small handful of (typically binary) choices.We demonstrate the utility of these methods and analysis plan in four real-world problems of varying scales. Specifically, we study floral phenotype and pollination in columbines, domestication in industrial yeast, life history in mammals, and brain morphology in New World monkeys.General and impactful community employment of these methods requires a data scientific analysis plan that balances flexibility, speed and ease of use, while minimizing model and algorithm tuning. Even in the presence of non-trivial phylogenetic model constraints, we show that one may analytically address latent factor uncertainty in a way that (a) aids model flexibility, (b) accelerates computation (by as much as 500-fold) and (c) decreases required tuning. These efforts coalesce to create an accessible Bayesian approach to high-dimensional phylogenetic comparative methods on large trees.

Environmentally Modulated Repeat Evolution of Polymorphic Arctic Charr Life History Traits

Sympatric Arctic charr, Salvelinus alpinus (L. 1758), morphs have flexible but repeated life history strategies tested across five Norwegian lakes. In several Scandinavian polymorphic Arctic charr populations differentiated by their diet and habitat use, a large littoral omnivorous (LO) morph commonly cooccurs with a smaller profundal spawning (PB/PZ) morph. A third, large piscivorous (PP) morph is also known to occur within a portion of Arctic charr populations in the profundal habitat along with the PB/PZ individuals. Life history traits, such as age at maturity, growth, and diet are known to differ among coexisting morphs. Notably, the PP morph was the longest morph with the oldest age at maturity while the PB/PZ morph showed the shortest lengths overall and youngest age with LO morph being intermediate in both traits. Growth parameters differed across all the morphs. When examining growth within morph groups, the LO morph was found to have different growth across all lakes, while similar reproductive investments and different energy acquisition patterns were seen within the PB/PZ and PP morphs. These results suggest repeat evolution in several life history strategies of reproductively isolated Arctic charr sympatric morphs, notably for the first time in the PP morph, while also highlighting the importance of the local environment in modulating life history traits.

Palaeohistology reveals a slow pace of life for the dwarfed Sicilian elephant

The 1-m-tall dwarf elephant Palaeoloxodon falconeri from the Pleistocene of Sicily (Italy) is an extreme example of insular dwarfism and epitomizes the Island Rule. Based on scaling of life-history (LH) traits with body mass, P. falconeri is widely considered to be ‘r-selected’ by truncation of the growth period, associated with an early onset of reproduction and an abbreviated lifespan. These conjectures are, however, at odds with predictions from LH models for adaptive shifts in body size on islands. To settle the LH strategy of P. falconeri, we used bone, molar, and tusk histology to infer growth rates, age at first reproduction, and longevity. Our results from all approaches are congruent and provide evidence that the insular dwarf elephant grew at very slow rates over an extended period; attained maturity at the age of 15 years; and had a minimum lifespan of 68 years. This surpasses not only the values predicted from body mass but even those of both its giant sister taxon (P. antiquus) and its large mainland cousin (L. africana). The suite of LH traits of P. falconeri is consistent with the LH data hitherto inferred for other dwarfed insular mammals. P. falconeri, thus, not only epitomizes the Island Rule but it can also be viewed as a paradigm of evolutionary change towards a slow LH that accompanies the process of dwarfing in insular mammals.

Effective investments due to seasonal morphological changes? Possible reasons and consequences of allometric growth and reproduction in adult signal crayfish (Pacifastacus leniusculus)

Signal crayfish (Pacifastacus leniusculus (Dana, 1852)) are among the most invasive macroinvertebrates in Europe, representing economic value as well as serious threats to ecosystems. Despite decades of research, uncertainties with respect to its biology remain. The present study describes the observations of adult signal crayfish during a single growing season, with a sex ratio of 1:1, reared under natural ambient conditions, in which moulting events, growth increments, morphological changes, mortality, and reproductive output were monitored. Two moults were observed in the majority of both sexes, with significant differences in moult growth increments of once- and twice-moulted animals. These led to modifications in morphology during the growing season. Females showed isometric growth at the first moult, while, at the second moult, they strengthened the functional state of structures linked to reproduction. In males, the effect was similar, but to a lesser extent, with extensive chelae development at the second moult. There were no differences in relative fecundity of once- and twice-moulted females. However, signal crayfish have different needs during the growing and reproductive seasons. The presented results indicate the ability to use resources according to current needs (development of strategical body parts) via their seasonal morphological plasticity as seen in representatives of the family Cambaridae.

Growth stanza in fish life history using otoliths shape: the protandric Centropomus case (Carangaria: Centropomidae)

ABSTRACT Morphoanatomical or physiological changes coupled with changes in body size are known as allometric relationships. The objective of this study was to identify the points of growth changes in Centropomus based on otolith morphometry and morphogeometry. For this purpose, 455 individuals of C. undecimalis and 176 of C. parallelus were collected from artisanal fishermen of the coast of the state of Alagoas, Brazil. The sagittal otoliths were measured for length, height, perimeter, area and weighed. The potential and polyphasic models were fitted between total fish length and otolith length. The morphotypes otoliths wen describe by form Fourier descriptors and shape indices. The polyphasic model detected three growth phases. The first stanza for C. undecimalis was at 46.8 cm and the second at 75.9 cm. For C. parallelus, it was at 18.8 cm and at 41.2 cm. Each stanza has a specific otoliths morphotype in both species. The otoliths of C. undecimalis and C. parallelus exhibited ontogenetic allometric changes in their growth pattern with two stanzas changing points. The stanzas corresponded to specific lengths reached by individuals over their life cycles, such as their size at maturity and length at sexual reversion.

Changes in the wing shape and size in Drosophila melanogaster treated with food grade titanium dioxide nanoparticles (E171) - A multigenerational study

Drosophila is among the most commonly used models for toxicity assessment of different types of nanoparticles. This study aims to examine the effects of a constant exposure to the low concentration of human food grade titanium dioxide nanoparticles (TiO₂ E171) on Drosophila melanogaster wing morphology over multiple generations. Subsequently, the Geometric Morphometrics Analysis was employed to examine possible changes in the wing shape and size of the treated flies. The treatment resulted in the diminishment but not a disruption in the sexual dimorphism in wings. Consequently, the female flies were clearly separated from the male flies by the differences in wing morphology as in the control group. A splitting by generations was overly similar within the control and the treatment, but it was slightly more pronounced in the treatment. However, the observed generational differences seemed mostly random between generations, irrespective of the treatment. Specifically, the treated groups displayed slightly higher splitting by generations in females than in males. Regardless of the generation, the results show a clear splitting by the differences in the wing shape between the treated flies and the flies from control. The mean value of centroid size, which refers to the wing size, of both female and male wings was smaller in the treatment when compared to the control. The overall effect of TiO₂ was to induce significant difference in Drosophila wing morphology but it did not alter the general wing morphology pattern. Therefore, the change in the wings occurred only within the normally allowed wing variation.

Selection for small body size favours contrasting sex-specific life histories, boldness and feeding in medaka, Oryzias latipes

BACKGROUND

Studying variation in life-history traits and correlated behaviours, such as boldness and foraging (i.e., pace-of-life syndrome), allows us to better understand how these traits evolve in a changing environment. In fish, it is particularly relevant studying the interplay of resource abundance and size-selection. These are two environmental stressors affecting fish in natural conditions, but also associated with human-induced environmental change. For instance, fishing, one of the most important threats for freshwater and marine populations, results in both higher mortality on large-sized fish and reduced population density.

RESULTS

Medaka, Oryzias latipes, from lines selected for large or small size over ten generations, were exposed individually to high or low food availability from birth to adulthood. Maturation schedules, reproductive investment, growth, boldness and feeding were assessed to evaluate the effect of size-selection on the pace of life, and whether it differed between food contexts (high and low). Different food abundance and size-selection resulted in diverse life histories associated with different feeding and boldness behaviour, thus showing different pace-of-life-syndromes. High availability of food favoured faster growth, earlier maturation and increased shyness. Selection for small size led to slower growth in both males and females. But, the life-history trajectory to reach such growth was sex- and food-specific. Under low food conditions, females selected for small size showed earlier maturation, which led to slower adult growth and subsequent low willingness to feed, compared to females selected for large size. No line differences were found in females at high food conditions. In contrast, males exposed to selection for small size grew slower both as juvenile and adult, and were bolder under both feeding regimes. Therefore, the response to size-selection was more sensitive to food availability in females than in males.

CONCLUSIONS

We showed that size-selection (over ten generations) and resource abundance (over developmental time) led to changes in life history and behaviour. However, the effect of size-selection was sex- and context-specific, calling for precaution when drawing general conclusions on the population-level effects (or lack of them) of size-selective fishing. Conservation and management plans should consider this sex- and context-specificity.

Have We Outgrown the Existing Models of Growth?

Theories of growth have a long history in biology. Two major branches of theory (mechanistic and phenomenological) describe the dynamics of growth and explain variation in the size of organisms. Both theory branches usually assume that reproductive output scales proportionately with body size, in other words that reproductive output is isometric. A meta-analysis of hundreds of marine fishes contradicts this assumption, larger mothers reproduce disproportionately more in 95% of species studied, and patterns in other taxa suggest that reproductive hyperallometry is widespread. We argue here that reproductive hyperallometry represents a profound challenge to mechanistic theories of growth in particular, and that they should be revised accordingly. We suspect that hyperallometric reproduction drives growth trajectories in ways that are largely unanticipated by current theories.

The Energetic Cost of Reproduction and Its Effect on Optimal Life-History Strategies

Trade-offs in energy allocation between growth, reproduction, and survival are at the core of life-history theory. While age-specific mortality is considered to be the main determinant of the optimal allocation, some life-history strategies, such as delayed or skipped reproduction, may be better understood when also accounting for reproduction costs. Here, we present a two-pool indeterminate grower model that includes survival and energetic costs of reproduction. The energetic cost sets a minimum reserve required for reproduction, while the survival cost reflects increased mortality from low postreproductive body condition. Three life-history parameters determining age-dependent energy allocation to soma, reserve, and reproduction are optimized, and we show that the optimal strategies can reproduce realistic emergent growth trajectories, maturation ages, and reproductive outputs for fish. The model predicts maturation phase shifts along the gradient of condition-related mortality and shows that increased harvesting will select for earlier maturation and higher energy allocation to reproduction. However, since the energetic reproduction cost sets limits on how early an individual can mature, an increase in fitness at high harvesting can only be achieved by diverting most reserves into reproduction. The model presented here can improve predictions of life-history responses to environmental change and human impacts because key life-history traits such as maturation age and size, maximum body size, and size-specific fecundity emerge dynamically.

A novel growth function incorporating the effects of reproductive energy allocation

Ontogenetic growth functions provide basic information in biological and ecological studies. Various growth functions classified into the Pütter model have been used historically, regardless of controversies over their appropriateness. Here, we present a novel growth function for fish and aquatic organisms (generalised q-VBGF) by considering an allocation schedule of allometrically produced surplus energy between somatic growth and reproduction. The generalised q-VBGF can track growth trajectories in different life history strategies from determinate to indeterminate growth by adjusting the value of the 'growth indeterminacy exponent' q. The timing of maturation and attainable body size can be adjusted by the 'maturation timing parameter' τ while maintaining a common growth trajectory before maturation. The generalised q-VBGF is a comprehensive growth function in which exponentials in the traditional monomolecular, von Bertalanffy, Gompertz, logistic, and Richards functions are replaced with q-exponentials defined in the non-extensive Tsallis statistics, and it fits to actual data more adequately than these conventional functions. The relationship between the estimated parameter values τ and rq forms a unique hyperbola, which provides a new insight into the continuum of life history strategies of organisms.

Accurate estimates of age at maturity from the growth trajectories of fishes and other ectotherms

Age at maturity (AAM) is a key life history trait that provides insight into ecology, evolution, and population dynamics. However, maturity data can be costly to collect or may not be available. Life history theory suggests that growth is biphasic for many organisms, with a change-point in growth occurring at maturity. If so, then it should be possible to use a biphasic growth model to estimate AAM from growth data. To test this prediction, we used the Lester biphasic growth model in a likelihood profiling framework to estimate AAM from length at age data. We fit our model to simulated growth trajectories to determine minimum data requirements (in terms of sample size, precision in length at age, and the cost to somatic growth of maturity) for accurate AAM estimates. We then applied our method to a large walleye Sander vitreus data set and show that our AAM estimates are in close agreement with conventional estimates when our model fits well. Finally, we highlight the potential of our method by applying it to length at age data for a variety of ectotherms. Our method shows promise as a tool for estimating AAM and other life history traits from contemporary and historical samples.

Effects of ambient oxygen and size-selective mortality on growth and maturation in guppies

Growth, onset of maturity and investment in reproduction are key traits for understanding variation in life-history strategies. Many environmental factors affect variation in these traits, but for fish, hypoxia and size-dependent mortality have become increasingly important because of human activities, such as increased nutrient enrichment (eutrophication), climate warming and selective fishing. Here, we study experimentally the effect of oxygen availability on maturation and growth in guppies (Poecilia reticulata) from two different selected lines, one subjected to positive and the other negative size-dependent fishing. This is the first study to assess the effects of both reduced ambient oxygen and size-dependent mortality in fish. We show that reduced ambient oxygen led to stunting, early maturation and high reproductive investment. Likewise, lineages that had been exposed to high mortality of larger-sized individuals displayed earlier maturation at smaller size, greater investment in reproduction and faster growth. These life-history changes were particularly evident for males. The widely reported trends towards earlier maturation in wild fish populations are often interpreted as resulting from size-selective fishing. Our results highlight that reduced ambient oxygen, which has received little experimental investigation to date, can lead to similar phenotypic changes. Thus, changes in ambient oxygen levels can be a confounding factor that occurs in parallel with fishing, complicating the causal interpretation of changes in life-history traits. We believe that better disentangling of the effects of these two extrinsic factors, which increasingly affect many freshwater and marine ecosystems, is important for making more informed management decisions.