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Liu C, Li J, Qi X, Wang L, Sun D, Zhang J, Zhang K, Li J, Li Y, Wen H. Cytochrome P450 superfamily in spotted sea bass: Genome-wide identification and expression profiles under trichlorfon and environmental stresses. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY. PART D, GENOMICS & PROTEOMICS 2023; 46:101078. [PMID: 37121223 DOI: 10.1016/j.cbd.2023.101078] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/21/2022] [Revised: 04/10/2023] [Accepted: 04/11/2023] [Indexed: 05/02/2023]
Abstract
Cytochrome P450s (CYPs), as one of the most diverse enzyme superfamilies in nature, play critical functions in antioxidant reactions against endogenous and exogenous compounds. In this study, we performed genome-wide characterization of CYP superfamily members and analyzed their expression patterns under several abiotic stresses in spotted sea bass, which is known as an economically important fish species in the Chinese aquaculture industry. A total of 55 CYP genes were identified and divided into 17 families within 10 clans. The analysis of phylogeny, gene structure, and syntenic relationships provided evidence for the evolution of CYP genes and confirmed their annotation and orthology. The expression of CYP genes was examined in the liver during trichlorfon stress using quantitative real-time PCR. The results showed that 20 tested CYP genes displayed significant mRNA expression changes, indicating that they may play crucial roles in the metabolism of trichlorfon and can be potential biomarkers for trichlorfon pollution. Moreover, by screening transcriptomic databases, 10, 3 and 19 CYP genes exhibited differential expression patterns in response to hypoxia, alkalinity and heat stress, respectively. Taken together, this study provided insights into the regulation of CYP genes by toxicological and environmental stresses, laid basis for extensive functional studies of the CYP superfamily in spotted sea bass and other teleost species.
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Affiliation(s)
- Cong Liu
- Fisheries College, Ocean University of China, Qingdao, Shandong 266003, China; Key Laboratory of Mariculture, Ministry of Education (KLMME), Ocean University of China, Shandong 266003, China
| | - Junjie Li
- Fisheries College, Ocean University of China, Qingdao, Shandong 266003, China; Key Laboratory of Mariculture, Ministry of Education (KLMME), Ocean University of China, Shandong 266003, China
| | - Xin Qi
- Fisheries College, Ocean University of China, Qingdao, Shandong 266003, China; Key Laboratory of Mariculture, Ministry of Education (KLMME), Ocean University of China, Shandong 266003, China
| | - Lingyu Wang
- Fisheries College, Ocean University of China, Qingdao, Shandong 266003, China; Key Laboratory of Mariculture, Ministry of Education (KLMME), Ocean University of China, Shandong 266003, China
| | - Donglei Sun
- Fisheries College, Ocean University of China, Qingdao, Shandong 266003, China; Key Laboratory of Mariculture, Ministry of Education (KLMME), Ocean University of China, Shandong 266003, China
| | - Jingru Zhang
- Fisheries College, Ocean University of China, Qingdao, Shandong 266003, China; Key Laboratory of Mariculture, Ministry of Education (KLMME), Ocean University of China, Shandong 266003, China
| | - Kaiqiang Zhang
- Fisheries College, Ocean University of China, Qingdao, Shandong 266003, China; Key Laboratory of Mariculture, Ministry of Education (KLMME), Ocean University of China, Shandong 266003, China
| | - Jianshuang Li
- Fisheries College, Ocean University of China, Qingdao, Shandong 266003, China; Key Laboratory of Mariculture, Ministry of Education (KLMME), Ocean University of China, Shandong 266003, China
| | - Yun Li
- Fisheries College, Ocean University of China, Qingdao, Shandong 266003, China; Key Laboratory of Mariculture, Ministry of Education (KLMME), Ocean University of China, Shandong 266003, China.
| | - Haishen Wen
- Fisheries College, Ocean University of China, Qingdao, Shandong 266003, China; Key Laboratory of Mariculture, Ministry of Education (KLMME), Ocean University of China, Shandong 266003, China.
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Nordborg FM, Jones RJ, Oelgemöller M, Negri AP. The effects of ultraviolet radiation and climate on oil toxicity to coral reef organisms - A review. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 720:137486. [PMID: 32325569 DOI: 10.1016/j.scitotenv.2020.137486] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2019] [Revised: 02/20/2020] [Accepted: 02/20/2020] [Indexed: 05/20/2023]
Abstract
Oil pollution remains a significant local threat to shallow tropical coral reef environments, but the environmental conditions typical of coral reefs are rarely considered in oil toxicity testing and risk assessments. Here we review the effects of three environmental co-factors on petroleum oil toxicity towards coral reef organisms, and show that the impacts of oil pollution on coral reef taxa can be exacerbated by environmental conditions commonly encountered in tropical reef environments. Shallow reefs are routinely exposed to high levels of ultraviolet radiation (UVR), which can substantially increase the toxicity of some oil components through phototoxicity. Exposure to UVR represents the most likely and harmful environmental co-factor reviewed here, leading to an average toxicity increase of 7.2-fold across all tests reviewed. The clear relevance of UVR co-exposure and its strong influence on tropical reef oil toxicity highlights the need to account for UVR as a standard practice in future oil toxicity studies. Indeed, quantifying the influence of UVR on toxic thresholds of oil to coral reef species is essential to develop credible oil spill risk models required for oil extraction developments, shipping management and spill responses in the tropics. The few studies available indicate that co-exposure to elevated temperature and low pH, both within the range of current daily and seasonal fluctuations and/or projected under continued climate change, can increase oil toxicity on average by 3.0- and 1.3-fold, respectively. While all three of the reviewed environmental co-factors have the potential to substantially increase the impacts of oil pollution in shallow reef environments, their simultaneous effects have not been investigated. Assessments of the combined effects of oil pollution, UVR, temperature and low pH will become increasingly important to identify realistic hazard thresholds suitable for future risk assessments over the coming century.
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Affiliation(s)
- F Mikaela Nordborg
- James Cook University, College of Science & Engineering, Townsville, Queensland 4810, Australia; AIMS@JCU, Division of Research & Innovation, James Cook University and Australian Institute of Marine Science, Townsville 4810, Queensland, Australia; Australian Institute of Marine Science, Townsville 4810, Queensland, Australia.
| | - Ross J Jones
- Australian Institute of Marine Science, Crawley 6009, Western Australia, Australia
| | - Michael Oelgemöller
- James Cook University, College of Science & Engineering, Townsville, Queensland 4810, Australia
| | - Andrew P Negri
- AIMS@JCU, Division of Research & Innovation, James Cook University and Australian Institute of Marine Science, Townsville 4810, Queensland, Australia; Australian Institute of Marine Science, Townsville 4810, Queensland, Australia
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Transcriptome-Based Identification and Molecular Evolution of the Cytochrome P450 Genes and Expression Profiling under Dimethoate Treatment in Amur Stickleback ( Pungitius sinensis). Animals (Basel) 2019; 9:ani9110873. [PMID: 31661806 PMCID: PMC6912322 DOI: 10.3390/ani9110873] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2019] [Revised: 10/11/2019] [Accepted: 10/18/2019] [Indexed: 01/08/2023] Open
Abstract
Cytochrome P450s (CYPs) are a family of membrane-bound mono-oxygenase proteins, which are involved in cell metabolism and detoxification of various xenobiotic substances. In this study, we identified 58 putative CYP genes in Amur stickleback (Pungitius sinensis) based on the transcriptome sequencing. Conserved motif distribution suggested their functional relevance within each group. Some present recombination events have accelerated the evolution of this gene family. Moreover, a few positive selection sites were identified, which may have accelerated the functional divergence of this family of proteins. Expression patterns of these CYP genes were investigated and indicated that most were affected by dimethoate treatment, suggesting that CYPs were involved in the detoxication of dimethoate. This study will provide a foundation for the further functional investigation of CYP genes in fishes.
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Leggieri LR, De Anna JS, Cárcamo JG, Cerón GA, Darraz LA, Panebianco A, Luquet CM. Gills CYP1A of Oncorhynchus mykiss as a sensitive biomarker of crude oil pollution in freshwater environments. ENVIRONMENTAL TOXICOLOGY AND PHARMACOLOGY 2019; 67:61-65. [PMID: 30716677 DOI: 10.1016/j.etap.2019.01.008] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2018] [Revised: 01/18/2019] [Accepted: 01/20/2019] [Indexed: 06/09/2023]
Abstract
The induction of CYP1A activity (EROD) and protein expression was compared in liver and gills of rainbow trout from a stream polluted with crude oil, and through laboratory exposures to 1% and 5% of water accommodated fraction of the crude oil (WAF) for 1 and 4 days. Gills EROD increased 1.6-2.7-fold in fish from the polluted stream and during experiments, while liver EROD was induced only by 1% WAF at day 1 (1.5-fold). Contrastingly, crude oil pollution strongly induced both liver and gills CYP1A protein expression in the field (14-36-fold) and in experiments (4-25-fold). This highlights that crude oil induced CYP1A activity markedly in gills but only slightly or not at all in the liver, suggesting that differences between organ EROD activities are related to the modulation of CYP1A enzyme activity but not to the regulation at transcriptional or translational levels.
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Affiliation(s)
| | | | - Juan G Cárcamo
- Centro FONDAP, Interdisciplinary Center for Aquaculture Research (INCAR), Chile; Instituto de Bioquímica y Microbiología, Facultad de Ciencias, Universidad Austral de Chile, Valdivia, Chile
| | - Gerardo A Cerón
- Laboratorio de Zoología, CRUB (UNCo) - CONICET, Bariloche, Argentina
| | - Luis Arias Darraz
- Instituto de Bioquímica y Microbiología, Facultad de Ciencias, Universidad Austral de Chile, Valdivia, Chile
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A protocol for identifying suitable biomarkers to assess fish health: A systematic review. PLoS One 2017; 12:e0174762. [PMID: 28403149 PMCID: PMC5389625 DOI: 10.1371/journal.pone.0174762] [Citation(s) in RCA: 64] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2016] [Accepted: 03/15/2017] [Indexed: 12/25/2022] Open
Abstract
Background Biomarkers have been used extensively to provide the connection between external levels of contaminant exposure, internal levels of tissue contamination, and early adverse effects in organisms. Objectives To present a three-step protocol for identifying suitable biomarkers to assess fish health in coastal and marine ecosystems, using Gladstone Harbour (Australia) as a case study. Methods Prior to applying our protocol, clear working definitions for biomarkers were developed to ensure consistency with the global literature on fish health assessment. First, contaminants of concern were identified based on the presence of point and diffuse sources of pollution and available monitoring data for the ecosystem of interest. Second, suitable fish species were identified using fisheries dependent and independent data, and prioritised based on potential pathways of exposure to the contaminants of concern. Finally, a systematic and critical literature review was conducted on the use of biomarkers to assess the health of fish exposed to the contaminants of concern. Results/Discussion We present clear working definitions for bioaccumulation markers, biomarkers of exposure, biomarkers of effect and biomarkers of susceptibility. Based on emission and concentration information, seven metals were identified as contaminants of concern for Gladstone Harbour. Twenty out of 232 fish species were abundant enough to be potentially suitable for biomarker studies; five of these were prioritised based on potential pathways of exposure and susceptibility to metals. The literature search on biomarkers yielded 5,035 articles, of which 151met the inclusion criteria. Based on our review, the most suitable biomarkers include bioaccumulation markers, biomarkers of exposure (CYP1A, EROD, SOD, LPOX, HSP, MT, DNA strand breaks, micronuclei, apoptosis), and biomarkers of effect (histopathology, TAG:ST). Conclusion Our protocol outlines a clear pathway to identify suitable biomarkers to assess fish health in coastal and marine ecosystems, which can be applied to biomarker studies in aquatic ecosystems around the world.
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Harbi K, Makridis P, Koukoumis C, Papadionysiou M, Vgenis T, Kornaros M, Ntaikou I, Giokas S, Dailianis S. Evaluation of a battery of marine species-based bioassays against raw and treated municipal wastewaters. JOURNAL OF HAZARDOUS MATERIALS 2017; 321:537-546. [PMID: 27676080 DOI: 10.1016/j.jhazmat.2016.09.036] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2016] [Revised: 09/13/2016] [Accepted: 09/14/2016] [Indexed: 06/06/2023]
Abstract
The present study evaluates a battery of marine species-based bioassays against chemically characterized municipal wastewater samples (raw and WWTP treated). We estimated Dunaliella tertiolecta growth rate inhibition (24-96h IC50 values), Artemia franciscana immobilization (24h LC50 values), mussel hemocytes viability and lipid peroxidation enhancement (in terms of neutral red retention assay/NRRT and malondialdehyde/MDA content, respectively) in influent- and WWTP effluent-treated species. We found algal growth arrest and stimulation respectively, almost similar 24hLC50 values in Artemia sp., and significantly higher adverse effects (in terms of NRRT and MDA levels) in influent-treated mussel hemocytes. Furthermore, the estimation of hatchability, yolk-sac larvae mortality (24-120hLC50) and spinal deformities (SD) in sea bream Sparus aurata showed slight variations over time, with the lowest LC50 and SD50 (representing spinal deformities at 50% of yolk-sac larvae) values to be observed in influent-treated larvae at 120h. Data interpretation (both chemical and biological) revealed that toxic endpoints, such as NRRT50, 96hIC50Dun, 120hLC50Sparus and 120hSD50Sparus, significantly related to WWTP removal efficiency and further mediated by the presence of dominant compounds, such as As and Cr, could be used for identifying main components of toxicity in wastewaters.
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Affiliation(s)
- Kassiani Harbi
- Section of Animal Biology, Department of Biology, Faculty of Sciences, University of Patras, GR 26 500, Greece
| | - Pavlos Makridis
- Section of Animal Biology, Department of Biology, Faculty of Sciences, University of Patras, GR 26 500, Greece
| | - Christos Koukoumis
- Laboratory of Biochemical Engineering and Environmental Technology, Department of Chemical Engineering, University of Patras, 1 Karatheodori St., University Campus, GR 26 500, Patras, Greece
| | - Marina Papadionysiou
- Laboratory of Biochemical Engineering and Environmental Technology, Department of Chemical Engineering, University of Patras, 1 Karatheodori St., University Campus, GR 26 500, Patras, Greece
| | - Theodoros Vgenis
- Laboratory of Biochemical Engineering and Environmental Technology, Department of Chemical Engineering, University of Patras, 1 Karatheodori St., University Campus, GR 26 500, Patras, Greece
| | - Michael Kornaros
- Laboratory of Biochemical Engineering and Environmental Technology, Department of Chemical Engineering, University of Patras, 1 Karatheodori St., University Campus, GR 26 500, Patras, Greece
| | - Ioanna Ntaikou
- Institute of Chemical Engineering Sciences, Foundation of Research & Technology Hellas (ICEHT/FORTH), 10 Stadiou St., Platani, GR 26 504, Patras, Greece
| | - Sinos Giokas
- Section of Animal Biology, Department of Biology, Faculty of Sciences, University of Patras, GR 26 500, Greece
| | - Stefanos Dailianis
- Section of Animal Biology, Department of Biology, Faculty of Sciences, University of Patras, GR 26 500, Greece.
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Bar I, Cummins S, Elizur A. Transcriptome analysis reveals differentially expressed genes associated with germ cell and gonad development in the Southern bluefin tuna (Thunnus maccoyii). BMC Genomics 2016; 17:217. [PMID: 26965070 PMCID: PMC4785667 DOI: 10.1186/s12864-016-2397-8] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2015] [Accepted: 01/14/2016] [Indexed: 12/12/2022] Open
Abstract
BACKGROUND Controlling and managing the breeding of bluefin tuna (Thunnus spp.) in captivity is an imperative step towards obtaining a sustainable supply of these fish in aquaculture production systems. Germ cell transplantation (GCT) is an innovative technology for the production of inter-species surrogates, by transplanting undifferentiated germ cells derived from a donor species into larvae of a host species. The transplanted surrogates will then grow and mature to produce donor-derived seed, thus providing a simpler alternative to maintaining large-bodied broodstock such as the bluefin tuna. Implementation of GCT for new species requires the development of molecular tools to follow the fate of the transplanted germ cells. These tools are based on key reproductive and germ cell-specific genes. RNA-Sequencing (RNA-Seq) provides a rapid, cost-effective method for high throughput gene identification in non-model species. This study utilized RNA-Seq to identify key genes expressed in the gonads of Southern bluefin tuna (Thunnus maccoyii, SBT) and their specific expression patterns in male and female gonad cells. RESULTS Key genes involved in the reproductive molecular pathway and specifically, germ cell development in gonads, were identified using analysis of RNA-Seq transcriptomes of male and female SBT gonad cells. Expression profiles of transcripts from ovary and testis cells were compared, as well as testis germ cell-enriched fraction prepared with Percoll gradient, as used in GCT studies. Ovary cells demonstrated over-expression of genes related to stem cell maintenance, while in testis cells, transcripts encoding for reproduction-associated receptors, sex steroids and hormone synthesis and signaling genes were over-expressed. Within the testis cells, the Percoll-enriched fraction showed over-expression of genes that are related to post-meiosis germ cell populations. CONCLUSIONS Gonad development and germ cell related genes were identified from SBT gonads and their expression patterns in ovary and testis cells were determined. These expression patterns correlate with the reproductive developmental stage of the sampled fish. The majority of the genes described in this study were sequenced for the first time in T. maccoyii. The wealth of SBT gonadal and germ cell-related gene sequences made publicly available by this study provides an extensive resource for further GCT and reproductive molecular biology studies of this commercially valuable fish.
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Affiliation(s)
- Ido Bar
- Genecology Research Centre, Faculty of Science, Health, Education and Engineering, University of the Sunshine Coast, 4558 Maroochydore DC, Queensland, Australia
| | - Scott Cummins
- Genecology Research Centre, Faculty of Science, Health, Education and Engineering, University of the Sunshine Coast, 4558 Maroochydore DC, Queensland, Australia
| | - Abigail Elizur
- Genecology Research Centre, Faculty of Science, Health, Education and Engineering, University of the Sunshine Coast, 4558 Maroochydore DC, Queensland, Australia
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Wan R, Meng F, Fu W, Wang Q, Su E. Biochemical responses in the gills of Meretrix meretrix after exposure to treated municipal effluent. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2015; 111:78-85. [PMID: 25450918 DOI: 10.1016/j.ecoenv.2014.09.038] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2014] [Revised: 09/24/2014] [Accepted: 09/26/2014] [Indexed: 06/04/2023]
Abstract
The biochemical effects in marine bivalves exposed to increasing concentrations of treated municipal effluent (TME), as discharged into receiving marine waters, are investigated. The effluent was collected from a municipal sewage treatment plant (STP) in Qingdao (China). Meretrix meretrix were exposed to effluent volume ratio (EVR, ratio of effluent volume accounted for tailwater seawater mixture) 0%, 1%, 5%, 10%, and 20% (v/v) TME for 15 days and the following biochemical responses in gills were measured: (1) the activity of superoxide dismutase (SOD), catalase (CAT), glutathione peroxidase (GPx), glutathione reductase (GR), and glutathione (GSH) content, and lipid peroxidation levels of malondialdehyde (MDA), as oxidative stress biomarkers; (2) the activity of 7-ethoxyresorufin O-deethylase (EROD) and gluthathione S-transferase (GST), as phase I and phase II conjugation enzymes, respectively; (3) acetylcholinesterase (AChE), as a biomarker of neurotoxicity, and (4) metallothioneins (MTs), as proteins strongly induced by heavy metals. Most of the biochemical indices present high and significant variation frequency (above 50%). There is enhancement in the antioxidant enzymes, EROD, GST, AChE, and MTs, as well as consumption of GSH. The current experimental results suggest that effluent with concentrations less than 20% (v/v) do not cause lipid peroxidation damage. This implies that the activated defense is sufficient to protect the bivalves' gill tissues from cytotoxicity produced by the effluent. Furthermore, GSH, GPx, MTs, and GR are suitable, and sufficiently sensitive, biomarkers to indicate the pollution levels in marine environments receiving such effluent.
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Affiliation(s)
- Ru Wan
- Key Laboratory for Marine Environment and Ecology of Ministry of Education, Ocean University of China, Qingdao, Shandong Province 266100, China
| | - Fanping Meng
- Key Laboratory for Marine Environment and Ecology of Ministry of Education, Ocean University of China, Qingdao, Shandong Province 266100, China
| | - Wenchao Fu
- Key Laboratory for Marine Environment and Ecology of Ministry of Education, Ocean University of China, Qingdao, Shandong Province 266100, China
| | - Qun Wang
- Key Laboratory for Marine Environment and Ecology of Ministry of Education, Ocean University of China, Qingdao, Shandong Province 266100, China
| | - Enping Su
- Key Laboratory for Marine Environment and Ecology of Ministry of Education, Ocean University of China, Qingdao, Shandong Province 266100, China
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Pampanin DM, Larssen E, Øysæd KB, Sundt RC, Sydnes MO. Study of the bile proteome of Atlantic cod (Gadus morhua): Multi-biological markers of exposure to polycyclic aromatic hydrocarbons. MARINE ENVIRONMENTAL RESEARCH 2014; 101:161-168. [PMID: 25440786 DOI: 10.1016/j.marenvres.2014.10.002] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2014] [Revised: 10/14/2014] [Accepted: 10/15/2014] [Indexed: 06/04/2023]
Abstract
PAH metabolites present in bile are well-known biological markers of exposure in fish, and their investigation is recommended by the ICES (International Council for the Exploration of the Sea) and the OSPAR convention (Convention for the Protection of the Marine Environment of the North-East Atlantic) for monitoring purposes. Development of analytical strategies for fish bile is encouraged by the need for more sensitive and informative markers (e.g., capable of tracking the PAH composition of contamination sources) and strengthened by recent results in both fish genomics and proteomics. Herein, the study of the Atlantic cod bile proteome is presented. Preliminary testing for discovering new sensitive markers in the form of expressed proteins affected by PAH exposure (i.e., PAH-protein adducts) is reported. Protein markers were identified using LC-MS/MS analysis, as single biological indicators. Through multivariate analyses, the overall proteome was revealed to be a sensitive multi-biological marker of exposure to PAHs.
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Affiliation(s)
- Daniela M Pampanin
- IRIS-Environment, International Research Institute of Stavanger, Mekjarvik 12, NO-4070 Randaberg, Norway.
| | - Eivind Larssen
- IRIS-Environment, International Research Institute of Stavanger, Mekjarvik 12, NO-4070 Randaberg, Norway
| | - Kjell Birger Øysæd
- IRIS-Environment, International Research Institute of Stavanger, Mekjarvik 12, NO-4070 Randaberg, Norway
| | - Rolf C Sundt
- IRIS-Environment, International Research Institute of Stavanger, Mekjarvik 12, NO-4070 Randaberg, Norway
| | - Magne O Sydnes
- IRIS-Environment, International Research Institute of Stavanger, Mekjarvik 12, NO-4070 Randaberg, Norway; Faculty of Science and Technology, Department of Mathematics and Natural Science, University of Stavanger, NO-4036 Stavanger, Norway
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Rhee JS, Kim BM, Choi BS, Choi IY, Wu RSS, Nelson DR, Lee JS. Whole spectrum of cytochrome P450 genes and molecular responses to water-accommodated fractions exposure in the marine medaka. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2013; 47:4804-4812. [PMID: 23573833 DOI: 10.1021/es400186r] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
Water-accommodated fractions (WAFs) of crude oil include chemicals that are potent toxicants in fish. Increasing oil pollution thus demands a better understanding of molecular mechanisms for detoxification, metabolism, toxicity, and adaptation of fish. Previous studies with fish show modulation of expression of key genes in relation to stress response against WAF exposure, but there is still a lack of studies on responses of cytochrome P450 (CYP) genes and changes in biotransformation upon WAF exposure. In this study, we used the full spectrum of CYP genes of the marine medaka, Oryzias melastigma, to understand their potential mode of action on WAFs-triggered molecular mechanisms. We also analyzed further CYP-involved detoxification and endogenous steroidogenic metabolism after exposure to different concentrations of WAFs over different time courses in the marine medaka. Also, detoxification- and antioxidant-related enzymes' activities were analyzed with different concentrations of WAFs. As a result, the WAF exposure induced CYP-involved detoxification mechanism but reduced CYP-involved steroidogenic metabolism in the marine medaka. These data suggest that whole CYP profiling can be a way of understanding and uncovering the mode of action particularly with respect to emerging chemicals such as WAF exposure with the new finding that WAFs have dual functions on CYP-involved metabolisms.
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Affiliation(s)
- Jae-Sung Rhee
- Research Institute for Natural Sciences, Hanyang University, Seoul 133-791, South Korea
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Uno T, Ishizuka M, Itakura T. Cytochrome P450 (CYP) in fish. ENVIRONMENTAL TOXICOLOGY AND PHARMACOLOGY 2012; 34:1-13. [PMID: 22418068 DOI: 10.1016/j.etap.2012.02.004] [Citation(s) in RCA: 217] [Impact Index Per Article: 18.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2011] [Revised: 01/31/2012] [Accepted: 02/05/2012] [Indexed: 05/31/2023]
Abstract
Cytochrome P450 (CYP) enzymes are members of the hemoprotein superfamily, and are involved in the mono-oxygenation reactions of a wide range of endogenous and exogenous compounds in mammals and plants. Characterization of CYP genes in fish has been carried out intensively over the last 20 years. In Japanese pufferfish (Takifugu rubripes), 54 genes encoding P450s have been identified. Across all species of fish, 137 genes encoding P450s have been identified. These genes are classified into 18 CYP families: namely, CYP1, CYP2, CYP3, CYP4, CYP5, CYP7, CYP8, CYP11, CYP17, CYP19, CYP20, CYP21, CYP24, CYP26, CYP27, CYP39, CYP46 and CYP51.We pinpointed eight CYP families: namely, CYP1, CYP2, CYP3, CYP4, CYP11, CYP17, CYP19 and CYP26 in this review because these CYP families are studied in detail. Studies of fish P450s have provided insights into the regulation of P450 genes by environmental stresses including water pollution. In this review, we present an overview of the CYP families in fish.
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Affiliation(s)
- Tomohide Uno
- Laboratory of Biological Chemistry, Department of Biofunctional Chemistry, Faculty of Agriculture, Kobe University, Nada-ku Hyogo, Japan.
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12
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Liu F, Wiseman S, Wan Y, Doering JA, Hecker M, Lam MHW, Giesy JP. Multi-species comparison of the mechanism of biotransformation of MeO-BDEs to OH-BDEs in fish. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2012; 114-115:182-188. [PMID: 22446830 DOI: 10.1016/j.aquatox.2012.02.024] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2011] [Revised: 02/21/2012] [Accepted: 02/21/2012] [Indexed: 05/31/2023]
Abstract
Polybrominated diphenyl ethers (PBDEs) and their methoxylated- (MeO-) and hydroxylated- (OH-) analogs are ubiquitously distributed in the environment worldwide. The OH-BDEs have greater potency than PBDEs and can be produced from the transformation of MeO-BDEs. The objectives of the current study were to (1) identify the enzyme(s) that catalyze biotransformation of 6-MeO-BDE-47 to 6-OH-BDE-47 in livers from rainbow trout, and (2) compare biotransformation of 6-MeO-BDE-47 to 6-OH-BDE-47 among rainbow trout, white sturgeon and goldfish. Cytochrome P450 1A (CYP1A) enzymes did not catalyze the biotransformation reaction. However, biotransformation was significantly inhibited by the CYP inhibitors clotrimazole and 1-benzylimidazole but not gestodene. Therefore, the reaction is likely catalyzed by CYP2 enzymes. When biotransformation was compared among species, concentrations of 6-OH-BDE-47 were significantly 3.4- and 9.1-fold greater in microsomes from rainbow trout compared to goldfish or white sturgeon, respectively. Concentrations of 6-OH-BDE-47 in microsomes from goldfish were non-significantly 2.7-fold greater than in sturgeon. The initial rate of biotransformation in microsomes from livers of rainbow trout was significantly 2.0- and 6.2-fold greater than the initial rate of biotransformation in microsomes from livers of goldfish or sturgeon, respectively, while the initial rate in goldfish was significantly 3.1-fold greater than in sturgeon. It is hypothesized that differences in CYP-mediated biotransformation of MeO-BDEs to OH-BDEs could influence concentrations of OH-BDEs in different species of fish.
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Affiliation(s)
- Fengyan Liu
- Toxicology Centre, University of Saskatchewan, Saskatoon, SK S7N5B3, Canada
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13
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Baldisserotto B, Garcia LO, Benaduce AP, Duarte RM, Nascimento TL, Gomes LC, Chippari Gomes AR, Val AL. Sodium fluxes in tamoatá, Hoplosternum litoralle, exposed to formation water from Urucu Reserve (Amazon, Brazil). ARCHIVES OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY 2012; 62:78-84. [PMID: 21503699 DOI: 10.1007/s00244-011-9673-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2010] [Accepted: 04/04/2011] [Indexed: 05/30/2023]
Abstract
Formation water (produce water or oil field brine) from oil and gas production usually has high concentrations of soluble salts and metals. The objective of this study was to examine the effect of formation water from Urucu Reserve, Amazon, on whole-body uptake and internal distribution of newly accumulated Na+ in juvenile tamoatá, Hoplosternum litoralle. Groups of fish were submitted to nine treatments for 3 h in 400-ml chambers: control (well water), 5% formation water, and well water with respective concentrations of 5% formation water of Ca2+, Fe, Mn, Ba2+, Fe+Ca2+, Mn+Ca2+, and Ba+Ca2+ added. Specimens of tamoatá exposed to 5% formation water presented a very high Na+ influx, probably due to the high Na+ levels in this water. Waterborne Fe and Mn stimulated Na+ influx, but Fe increased Na+ efflux, causing Na+ loss. Waterborne Mn, on the other hand, decreased Na+ efflux, reducing Na+ loss by this species. Waterborne Ca2+ also affected Na+ influx but had no significant effect on net Na+ fluxes. These results demonstrated that spilling of formation water in ion-poor Amazon rivers would dramatically disrupt osmoregulatory balance of tamoatá and probably other Amazon fish species, impairing their survival and reduce biodiversity.
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Affiliation(s)
- Bernardo Baldisserotto
- Departamento de Fisiologia e Farmacologia, Universidade Federal de Santa Maria, Santa Maria, RS, Brazil.
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14
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Sundt RC, Ruus A, Jonsson H, Skarphéðinsdóttir H, Meier S, Grung M, Beyer J, Pampanin DM. Biomarker responses in Atlantic cod (Gadus morhua) exposed to produced water from a North Sea oil field: laboratory and field assessments. MARINE POLLUTION BULLETIN 2012; 64:144-152. [PMID: 22070981 DOI: 10.1016/j.marpolbul.2011.10.005] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2011] [Revised: 10/05/2011] [Accepted: 10/07/2011] [Indexed: 05/31/2023]
Abstract
Biological markers of produced water (PW) exposure were studied in Atlantic cod (Gadus morhua) in both laboratory and field experiments, using authentic PW from a North Sea oil field. In the laboratory study, the PW exposure yielded significantly elevated levels of metabolites of polycyclic aromatic hydrocarbons (PAHs) and alkylphenols (APs) in bile even at the lowest exposure dose (0.125% PW). Other biomarkers (hepatic CYP1A induction and DNA adduct formation) responded at 0.25% and 0.5% PW concentrations. In the field study, bile metabolite markers and hepatic CYP1A were clearly increased in fish caged close to the PW outfall. Induction of plasma vitellogenin was not found in laboratory or field exposures, suggesting that the levels of oestrogen agonists (such as APs) might not have been sufficient to elicit induction, under the present conditions. The applicability of the biomarkers for use in water column biomonitoring programs is discussed.
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Affiliation(s)
- Rolf C Sundt
- IRIS - International Research Institute of Stavanger, P.O. Box 8046, N-4068 Stavanger, Norway.
| | - Anders Ruus
- Norwegian Institute for Water Research, Gaustadalléen 21, N-0349 Oslo, Norway
| | - Henrik Jonsson
- IRIS - International Research Institute of Stavanger, P.O. Box 8046, N-4068 Stavanger, Norway
| | - Halldóra Skarphéðinsdóttir
- Laboratory for Aquatic Ecotoxicology, The Department of Applied Environmental Science, Stockholm University, SE-106 91 Stockholm, Sweden
| | - Sonnich Meier
- Institute of Marine Research, P.O. Box 1870, N-5817 Bergen, Norway
| | - Merete Grung
- Norwegian Institute for Water Research, Gaustadalléen 21, N-0349 Oslo, Norway
| | - Jonny Beyer
- IRIS - International Research Institute of Stavanger, P.O. Box 8046, N-4068 Stavanger, Norway
| | - Daniela M Pampanin
- IRIS - International Research Institute of Stavanger, P.O. Box 8046, N-4068 Stavanger, Norway
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dos Anjos NA, Schulze T, Brack W, Val AL, Schirmer K, Scholz S. Identification and evaluation of cyp1a transcript expression in fish as molecular biomarker for petroleum contamination in tropical fresh water ecosystems. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2011; 103:46-52. [PMID: 21392494 DOI: 10.1016/j.aquatox.2011.02.004] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2010] [Revised: 02/03/2011] [Accepted: 02/08/2011] [Indexed: 05/30/2023]
Abstract
In order to monitor potential contamination deriving from exploration and transport of oil in the Urucu region (Brazil), there is a need to establish suitable biomarkers for native Amazonian fish. Therefore, the transcript expression of various potentially sensitive genes (ahr2(1), cyp1a, hmox1, hsp70, maft, mt, nfe212, gstp1 and nqo1) in fish exposed to water soluble fractions of oil (WSF) was compared. The analysis was first performed in an established laboratory model, the zebrafish embryo. The cyp1a gene proved to be the most sensitive and robust marker for oil contamination and, hence, was selected to study the effect of oil-derived contaminants in the Amazonian cichlid Astronotus ocellatus. Induction of cyp1a transcript expression was observed for ≥0.0061% (v/v) WSFs. In liver samples of fish, collected from different lakes in the Urucu oil mining area, no elevated expression of cyp1a transcripts was observed. The data demonstrate the high sensitivity of cyp1a as indicator of oil exposure; further studies should be considered to test its usefulness at known contaminated sites and to evaluate influential factors by, e.g. mesocosm experiments.
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Affiliation(s)
- Nislanha Ana dos Anjos
- Laboratory of Ecophysiology and Molecular Evolution, National Institute for Research in the Amazon (INPA) Ave André Araújo 2936, 69060-001 Manaus, AM, Brazil
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Brooks S, Harman C, Zaldibar B, Izagirre U, Glette T, Marigómez I. Integrated biomarker assessment of the effects exerted by treated produced water from an onshore natural gas processing plant in the North Sea on the mussel Mytilus edulis. MARINE POLLUTION BULLETIN 2011; 62:327-39. [PMID: 21055778 DOI: 10.1016/j.marpolbul.2010.10.007] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2010] [Revised: 10/11/2010] [Accepted: 10/15/2010] [Indexed: 05/04/2023]
Abstract
The biological impact of a treated produced water (PW) was investigated under controlled laboratory conditions in the blue mussel, Mytilus edulis. Mussel health status was assessed using an integrated biomarker approach in combination with chemical analysis of both water (with SPMDs), and mussel tissues. Acyl-CoA oxidase activity, neutral lipid accumulation, catalase activity, micronuclei formation, lysosomal membrane stability in digestive cells and haemocytes, cell-type composition in digestive gland epithelium, and the integrity of the digestive gland tissue were measured after 5 week exposure to 0%, 0.01%, 0.1%, 0.5% and 1% PW. The suite of biomarkers employed were sensitive to treated PW exposure with significant sublethal responses found at 0.01-0.5% PW, even though individual chemical compounds of PW were at extremely low concentrations in both water and mussel tissues. The study highlights the benefits of an integrated biomarker approach for determining the potential effects of exposure to complex mixtures at low concentrations. Biomarkers were integrated in the Integrative Biological Response (IBR/n) index.
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Affiliation(s)
- Steven Brooks
- Norwegian Institute for Water Research (NIVA), Oslo, Norway.
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Meier S, Craig Morton H, Nyhammer G, Grøsvik BE, Makhotin V, Geffen A, Boitsov S, Kvestad KA, Bohne-Kjersem A, Goksøyr A, Folkvord A, Klungsøyr J, Svardal A. Development of Atlantic cod (Gadus morhua) exposed to produced water during early life stages: Effects on embryos, larvae, and juvenile fish. MARINE ENVIRONMENTAL RESEARCH 2010; 70:383-394. [PMID: 20846718 DOI: 10.1016/j.marenvres.2010.08.002] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2009] [Revised: 08/10/2010] [Accepted: 08/13/2010] [Indexed: 05/29/2023]
Abstract
Produced water (PW) contains numerous toxic compounds of natural origin, such as dispersed oil, metals, alkylphenols (APs), and polycyclic aromatic hydrocarbons (PAHs). In addition, PW also contains many different chemicals which have been added during the oil production process. In the study described here, cod were exposed to real PW collected from an oil production platform in the North Sea. This was done in order to best recreate the most realistic field-exposure regime in which fish will be affected by a wide range of chemicals. The biological effects found in this study therefore cannot be assigned to one group of chemicals alone, but are the result of exposure to the complex chemical mixture found in real PW. Since APs are well known to cause endocrine disruption in marine organisms, we focused our chemical analysis on APs in an attempt to better understand the long-term effects of APs from PW on the biology of fish. In this study, cod were exposed to several concentrations of real PW and 17β-oestradiol (E(2)), a natural oestrogen, at different developmental stages. Cod were exposed to PW either during the embryo and early larvae stage (up to 3 months of age) or during the early juvenile stage (from 3 to 6 months of age). Results showed that, in general, APs bioconcentrate in fish tissue in a dose and developmental stage dependent manner during PW exposure. However, juveniles appeared able to effectively metabolise the short chain APs. Importantly, PW exposure had no effect on embryo survival or hatching success. However, 1% PW clearly interfered with the development of normal larval pigmentation. After hatching most of the larvae exposed to 1% PW failed to begin feeding and died of starvation. This inability to feed may be linked to the increased incidence of jaw deformities seen in these larvae. In addition, cod exposed to 1% PW, had significantly higher levels of the biomarkers vitellogenin and CYP1A in plasma and liver, respectively. No similar effects were seen in cod exposed to either 0.1% or 0.01% PW.
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Affiliation(s)
- Sonnich Meier
- Institute of Marine Research, P.O. Box 1870, N-5817 Nordnes, Bergen, Norway.
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Deér AK, Henczová M, Banka L, Varanka Z, Nemcsók J. Effects of crude oil and oil fractions on the liver P450-dependent monooxygenase activities and antioxidant defence system of different freshwater fish species. ACTA BIOLOGICA HUNGARICA 2010; 61:262-73. [PMID: 20724273 DOI: 10.1556/abiol.61.2010.3.3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
The effects of crude oil (Szeged-Algyo, Hungary) and oil fractions (F1: rich in aromatics; F2 fraction: free from aromatics) were investigated on liver CYP1A isoenzymes and antioxidant defence system following their i.p. injection into different freshwater fish species: carp (Cyprinus carpio L.), silver carp (Hyphothalmichtys molitrix V.), and European eel (Anquilla anquilla). A dose of 2 mL kg -1 crude oil enhanced EROD activity 8-fold in carp and only 5-fold in eel after 3 days. Oil fraction F1 caused only a 2-fold induction in EROD activity only in carp, while F2 fraction caused significant inhibition in all three investigated fish species. The antioxidant parameters [lipid peroxidation (LP), catalase (CAT), superoxide dismutase (SOD), glutathione peroxidase (GPx), glutathione (GSH)] were measured following the treatment. A decrease of 50% in CAT activity was observed after oil treatment. The GSH level enhanced, resulting the protective effects against LP. The same dose of crude oil but a longer duration time resulted in lower CYP1A induction in carp and antioxidant parameters had returned close to control. In all treatments the EROD isoenzymes proved to be more sensitive and the effects of oil treatment showed species to be different. Carp proved to be more sensitive than eel or silver carp.
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Affiliation(s)
- Aranka Kiss Deér
- Department of Biochemistry and Molecular Biology, University of Szeged, Szeged, Hungary.
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Stefania G, Maura B, Claudia VL, Barbara P, Ginevra M, Francesco R. Biological effects of diethylene glycol (DEG) and produced waters (PWs) released from offshore activities: a multi-biomarker approach with the sea bass Dicentrarchus labrax. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2009; 157:3166-3173. [PMID: 19515471 DOI: 10.1016/j.envpol.2009.05.021] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2009] [Revised: 03/31/2009] [Accepted: 05/06/2009] [Indexed: 05/27/2023]
Abstract
Diethylene glycol (DEG) is largely used during oil and gas exploitation by offshore platforms. The aim of this work was to investigate if this compound induces direct molecular/cellular effects in marine organisms, or indirectly modulate those of produced waters (PWs). Sea bass (Dicentrarchus labrax) were exposed to DEG dosed alone or in combination with PWs from an Adriatic platform. A wide array of analysed biomarkers included cytochrome P450-dependent enzymatic activity, bile metabolites, glutathione S-transferases, acetylcholinesterase, peroxisomal proliferation, antioxidant defences (catalase, glutathione reductase, glutathione peroxidases, glutathione), total oxyradical scavenging capacity, malondialdehyde and DNA integrity (single strand breaks and frequency of micronuclei). Results did not reveal marked effects of DEG, while PWs influenced the biotransformation system, the oxidative status and the onset of genotoxic damages. Co-exposures caused only limited differences of biomarker responses at some experimental conditions, overall suggesting a limited biological impact of DEG at levels normally deriving from offshore activities.
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Affiliation(s)
- Gorbi Stefania
- Dipartimento di Biochimica, Biologia e Genetica, Università Politecnica delle Marche, Ancona, Italy
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Wang Y, Zhou Q, Peng S, Ma LQ, Niu X. Toxic effects of crude-oil-contaminated soil in aquatic environment on Carassius auratus and their hepatic antioxidant defense system. J Environ Sci (China) 2009; 21:612-617. [PMID: 20108662 DOI: 10.1016/s1001-0742(08)62315-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Under the indoor simulant conditions, toxic effects of crude-oil-contaminated soil which was put into aquatic environment on the young fishes Carassius auratus and their hepatic antioxidant system after a 20-d exposure were investigated. Results showed that the relationship between the mortality of C. auratus and the exposed doses could be divided into 3 phases: fishes exposed to the low dose groups (0.5-5.0 g/L) were dead due to the ingestion of crude-oil-contaminated soils in aquatic environment; at the medium dose groups (5.0-25.0 g/L) fishes were dead due to the penetration of toxic substances; at the high dose groups (25.0-50.0 g/L) fishes were dead due to environmental stress. The highest mortality and death speed were found in the 1.0 g/L dose group, and the death speed was sharply increased in the 50.0 g/L dose group in the late phase of exposure. The activities of superoxide dismutase (SOD), catalase (CAT) and glutathione S-transferase (GST) and the content of malaondialdehyde (MDA) in the hepatic tissues of C. auratus were induced significantly. The activity of SOD was increased and then decreased. It was significantly inhibited in the 50.0 g/L dose group. The activity of CAT was highly induced, and restored to a level which is little more than the control when the exposed doses exceeded 10.0 g/L. The activity of GST was the most sensitive, it was significantly induced in all dose groups, and the highest elevation was up to 6 times in the 0.5 g/L dose group comparing with the control. The MDA content was significantly elevated in the 50.0 g/L dose group, and the changes of the MDA content were opposite with the changes of GST activity.
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Affiliation(s)
- Yuanyuan Wang
- Key Laboratory of Pollution Processes and Environmental Criteria, Ministry of Education of China, College of Environmental Science and Engineering, Nankai University, Tianjin 300071, China.
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