Nutrient loss and water quality under extensive grazing in the upper Burdekin river catchment, North Queensland

Fresh waters and estuaries of the Great Barrier Reef catchment: Effects and management of anthropogenic disturbance on biodiversity, ecology and connectivity

We review the literature on the ecology, connectivity, human impacts and management of freshwater and estuarine systems in the Great Barrier Reef catchment (424,000 km²), on the Australian east coast. The catchment has high biodiversity, with substantial endemicity (e.g., lungfish). Freshwater and estuarine ecosystems are closely linked to the land and are affected by human disturbance, including climate change, flow management, land clearing, habitat damage, weed invasion, and excessive sediments, nutrients and pesticides. They require holistic integrated management of impacts, interactions, and land-sea linkages. This requirement is additional to land management aimed at reducing pollutant delivery to reef waters. Despite advances in research and management over recent decades, there are substantial deficiencies that need addressing, including understanding of physical and biological processes and impacts in ground waters, large rivers and estuaries; ecological effects of pesticides; management and mitigation for invasive species and climate change; and explicit protection of non-marine waters.

Effect of sugarcane cropping systems on herbicide losses in surface runoff

Herbicide runoff from cropping fields has been identified as a threat to the Great Barrier Reef ecosystem. A field investigation was carried out to monitor the changes in runoff water quality resulting from four different sugarcane cropping systems that included different herbicides and contrasting tillage and trash management practices. These include (i) Conventional - Tillage (beds and inter-rows) with residual herbicides used; (ii) Improved - only the beds were tilled (zonal) with reduced residual herbicides used; (iii) Aspirational - minimum tillage (one pass of a single tine ripper before planting) with trash mulch, no residual herbicides and a legume intercrop after cane establishment; and (iv) New Farming System (NFS) - minimum tillage as in Aspirational practice with a grain legume rotation and a combination of residual and knockdown herbicides. Results suggest soil and trash management had a larger effect on the herbicide losses in runoff than the physico-chemical properties of herbicides. Improved practices with 30% lower atrazine application rates than used in conventional systems produced reduced runoff volumes by 40% and atrazine loss by 62%. There were a 2-fold variation in atrazine and >10-fold variation in metribuzin loads in runoff water between reduced tillage systems differing in soil disturbance and surface residue cover from the previous rotation crops, despite the same herbicide application rates. The elevated risk of offsite losses from herbicides was illustrated by the high concentrations of diuron (14μgL(-1)) recorded in runoff that occurred >2.5months after herbicide application in a 1(st) ratoon crop. A cropping system employing less persistent non-selective herbicides and an inter-row soybean mulch resulted in no residual herbicide contamination in runoff water, but recorded 12.3% lower yield compared to Conventional practice. These findings reveal a trade-off between achieving good water quality with minimal herbicide contamination and maintaining farm profitability with good weed control.

The effect of soil and pasture attributes on rangeland infiltration rates in northern Australia

Surface runoff is an important factor affecting rangeland pasture productivity and off-site sediment transportation. The application of rangeland biophysical models including sub-models of runoff and erosion provides one method to assess how management and climate variability affect the frequency and quantity of surface runoff events. However, there is often limited confidence in extrapolating runoff models developed from site-specific, hillslope field experiments to other locations due to variation in soil types and land condition states. To improve rangeland runoff models, we investigated three potentially important components at 18 paired land condition sites: (1) the importance of a variety of pasture attributes such as biomass and cover on infiltration rates; (2) the impact of surface soil texture on infiltration rates; and (3) whether soil carbon and/or soil bulk density provide valuable indicators of a site’s infiltration rates. The study found that surface soil texture was important when aboveground biomass was low and was found to have a ‘broken-stick’ relationship with infiltration rates (i.e. lowest infiltration occurred at the pivot point of 64% sand). Aboveground biomass, (which included standing grass, grass litter and tree litter) was the best soil or pasture attribute for predicting a plot’s infiltration capacity accounting for 68% of the variability. Plots with surface soil sand content greater than 60% and which had been exclosed for between 4 and 24 years had higher average surface soil carbon mass and concentration (~10%) than adjacent grazed plots. The exclosed plots also had higher surface soil porosity, which was associated with very high infiltration rates.

Relating sediment impacts on coral reefs to watershed sources, processes and management: a review

Modification of terrestrial sediment fluxes can result in increased sedimentation and turbidity in receiving waters, with detrimental impacts on coral reef ecosystems. Preventing anthropogenic sediment reaching coral reefs requires a better understanding of the specific characteristics, sources and processes generating the anthropogenic sediment, so that effective watershed management strategies can be implemented. Here, we review and synthesise research on measured runoff, sediment erosion and sediment delivery from watersheds to near-shore marine areas, with a strong focus on the Burdekin watershed in the Great Barrier Reef region, Australia. We first investigate the characteristics of sediment that pose the greatest risk to coral reef ecosystems. Next we track this sediment back from the marine system into the watershed to determine the storage zones, source areas and processes responsible for sediment generation and run-off. The review determined that only a small proportion of the sediment that has been eroded from the watershed makes it to the mid and outer reefs. The sediment transported >1 km offshore is generally the clay to fine silt (<4-16 μm) fraction, yet there is considerable potential for other terrestrially derived sediment fractions (<63 μm) to be stored in the near-shore zone and remobilised during wind and tide driven re-suspension. The specific source of the fine clay sediments is still under investigation; however, the Bowen, Upper Burdekin and Lower Burdekin sub-watersheds appear to be the dominant source of the clay and fine silt fractions. Sub-surface erosion is the dominant process responsible for the fine sediment exported from these watersheds in recent times, although further work on the particle size of this material is required. Maintaining average minimum ground cover >75% will likely be required to reduce runoff and prevent sub-soil erosion; however, it is not known whether ground cover management alone will reduce sediment supply to ecologically acceptable levels.

Multivariate statistical techniques for the assessment of seasonal variations in surface water quality of pasture ecosystems

This study investigates the applicability of multivariate statistical techniques including cluster analysis (CA), discriminant analysis (DA), and factor analysis (FA) for the assessment of seasonal variations in the surface water quality of tropical pastures. The study was carried out in the TPU catchment, Kuala Lumpur, Malaysia. The dataset consisted of 1-year monitoring of 14 parameters at six sampling sites. The CA yielded two groups of similarity between the sampling sites, i.e., less polluted (LP) and moderately polluted (MP) at temporal scale. Fecal coliform (FC), NO3, DO, and pH were significantly related to the stream grouping in the dry season, whereas NH3, BOD, Escherichia coli, and FC were significantly related to the stream grouping in the rainy season. The best predictors for distinguishing clusters in temporal scale were FC, NH3, and E. coli, respectively. FC, E. coli, and BOD with strong positive loadings were introduced as the first varifactors in the dry season which indicates the biological source of variability. EC with a strong positive loading and DO with a strong negative loading were introduced as the first varifactors in the rainy season, which represents the physiochemical source of variability. Multivariate statistical techniques were effective analytical techniques for classification and processing of large datasets of water quality and the identification of major sources of water pollution in tropical pastures.

A Paddock to reef monitoring and modelling framework for the Great Barrier Reef: Paddock and catchment component

Targets for improvements in water quality entering the Great Barrier Reef (GBR) have been set through the Reef Water Quality Protection Plan (Reef Plan). To measure and report on progress towards the targets set a program has been established that combines monitoring and modelling at paddock through to catchment and reef scales; the Paddock to Reef Integrated Monitoring, Modelling and Reporting Program (Paddock to Reef Program). This program aims to provide evidence of links between land management activities, water quality and reef health. Five lines of evidence are used: the effectiveness of management practices to improve water quality; the prevalence of management practice adoption and change in catchment indicators; long-term monitoring of catchment water quality; paddock & catchment modelling to provide a relative assessment of progress towards meeting targets; and finally marine monitoring of GBR water quality and reef ecosystem health. This paper outlines the first four lines of evidence.

Quantifying the sources of pollutants in the Great Barrier Reef catchments and the relative risk to reef ecosystems

Development of the Great Barrier Reef (GBR) catchments in the last 150 years has increased the loads of suspended sediment, nutrients and pesticides ('pollutants') delivered to the GBR. The scale and type of development, the pollutants generated and the ecosystems offshore vary regionally. We analysed the relative risk of pollutants from agricultural land uses and identified the sources of these pollutants from different land uses for each region to develop priorities for management. The assessment showed the Wet Tropics and Mackay Whitsunday regions to be of relatively high risk dominated by sugarcane cultivation, contributing pesticide and dissolved inorganic nitrogen (DIN). The Burdekin and Fitzroy ranked medium-high risk dominated by grazing suspended sediment inputs for both, and additionally sugarcane DIN and pesticide inputs for the Burdekin. The Burnett Mary ranked medium risk, dominated by grazing and sugarcane. Cape York was not formally ranked but is considered to be low risk.

A new empirical model of sub-daily rainfall intensity and its application in a rangeland biophysical model

Sub-daily rainfall intensity has a significant impact on runoff and erosion rates in northern Australian rangelands. However, it has been difficult to include sub-daily rainfall intensity in rangeland biophysical models using historical climate data due to the limited number of pluviograph stations with long-term records. In this paper a new empirical model (‘Temperature I15’ model) was developed to predict the daily maximum 15-min rainfall intensity (I15) using daily minimum and maximum temperature and daily rainfall totals from 12 selected pluviograph stations across Australia. The ‘Temperature I15’ model accounted for 46% (P < 0.01) of the variation in observed daily I15 for an independent validation dataset derived from 67 Australia-wide pluviograph stations and represented both geographical and seasonal variability in I15. The model also accounted for 70% (P < 0.01) of the variation in the observed historical trend in I15 for the full record period (average record period was 37 years) of 73 Australia-wide pluviograph stations. The ‘Temperature I15’ model was found to be an improvement on a past empirical model of I15 and can be easily implemented in biophysical models by using readily available daily climate data. However, as the ‘Temperature I15’ model only represented 46% of the variation in daily observed I15, the model is best used in simulation studies on ‘timeframes’ in excess of 5 years. The new ‘Temperature I15’ model was implemented in the runoff equation of the Australia-wide spatial pasture growth model AussieGRASS, which predicts daily water balance and pasture growth for 185 different pasture communities. This resulted in an improved simulation of green cover for 71% of pasture communities but was worse for 25% of communities, with no change for 4% of communities.

Managing for rainfall variability: long-term profitability of different grazing strategies in a northern Australian tropical savanna

Several grazing strategies are recommended to manage sustainably for rainfall variability in northern Australia, but there is little objective data on their profitability relative to less sustainable management systems such as heavy stocking. In 1997, a large cattle grazing trial was initiated in northern Queensland to quantify the relative performance of a range of grazing strategies in a variable climate. These strategies were (i) moderate stocking (MSR) stocked at the calculated long-term carrying capacity (LTCC), (ii) heavy stocking (HSR) at twice LTCC, (iii) rotational wet-season spelling (R/Spell) at 1.5 LTCC, (iv) variable stocking (VAR), with stocking rates adjusted in May based on available forage and (v) a southern oscillation index (SOI)-variable strategy, with stocking rates adjusted in November based on available forage and SOI-based seasonal forecasts. Rainfall varied over the 12-year trial period, with sequences of dry and wet years. Gross margins (GM) in the HSR were initially high but collapsed in drier years due to high costs and reduced product value. GMs only recovered in later years with a reduced stocking rate and increased rainfall. The VAR and SOI were also initially very profitable, but GMs plunged as rainfall declined due to reduced animal performance and the sale of poor-condition cattle. This sharp cut in stocking rates nevertheless allowed GMs to recover well in subsequent years. In the MSR, GMs remained relatively constant across most years due to low costs and a higher product value. The R/Spell also performed relatively well despite being compromised by an ill-timed fire, drought and the subsequent sale of poor-condition cattle. Net present value (NPV) after 12 years was highest in the VAR ($11 962/100 ha), followed by the MSR ($11 873/100 ha), the SOI ($11 167/100 ha) and the R/Spell ($10 665/100 ha). NPV was by far the lowest in the HSR ($6930/100 ha). Profitability also varied the most in the HSR, with a negative GM in 6 of the 12 years. Incorporating the costs of natural resource decline would further reinforce the case against heavy stocking. These results challenge the assumption that sustainable management in a variable environment is unprofitable.

Managing for rainfall variability: effect of grazing strategy on cattle production in a dry tropical savanna

Rainfall variability is a challenge to sustainable and profitable cattle production in northern Australia. Strategies recommended to manage for rainfall variability, like light or variable stocking, are not widely adopted. This is due partly to the perception that sustainability and profitability are incompatible. A large, long-term grazing trial was initiated in 1997 in north Queensland, Australia, to test the effect of different grazing strategies on cattle production. These strategies are: (i) constant light stocking (LSR) at long-term carrying capacity (LTCC); (ii) constant heavy stocking (HSR) at twice LTCC; (iii) rotational wet-season spelling (R/Spell) at 1.5 LTCC; (iv) variable stocking (VAR), with stocking rates adjusted in May based on available pasture; and (v) a Southern Oscillation Index (SOI) variable strategy, with stocking rates adjusted in November, based on available pasture and SOI seasonal forecasts. Animal performance varied markedly over the 10 years for which data is presented, due to pronounced differences in rainfall and pasture availability. Nonetheless, lighter stocking at or about LTCC consistently gave the best individual liveweight gain (LWG), condition score and skeletal growth; mean LWG per annum was thus highest in the LSR (113 kg), intermediate in the R/Spell (104 kg) and lowest in the HSR (86 kg). Mean LWG was 106 kg in the VAR and 103 kg in the SOI but, in all years, the relative performance of these strategies was dependent upon the stocking rate applied. After 2 years on the trial, steers from lightly stocked strategies were 60–100 kg heavier and received appreciable carcass price premiums at the meatworks compared to those under heavy stocking. In contrast, LWG per unit area was greatest at stocking rates of about twice LTCC; mean LWG/ha was thus greatest in the HSR (21 kg/ha), but this strategy required drought feeding in four of the 10 years and was unsustainable. Although LWG/ha was lower in the LSR (mean 14 kg/ha), or in strategies that reduced stocking rates in dry years like the VAR (mean 18 kg/ha) and SOI (mean 17 kg/ha), these strategies did not require drought feeding and appeared sustainable. The R/Spell strategy (mean 104 kg/ha) was compromised by an ill-timed fire, but also performed satisfactorily. The present results provide important evidence challenging the assumption that sustainable management in a variable environment is unprofitable. Further research is required to fully quantify the long-term effects of these strategies on land condition and profitability and to extrapolate the results to breeder performance at the property level.

Broad-scale environmental influences on the abundance of saltwater crocodiles (Crocodylus porosus) in Australia

Saltwater crocodile (Crocodylus porosus) populations have recovered strongly across northern Australia over the 30 years since the species was protected from hunting. However, monitoring studies show large geographical variations in abundance across the Northern Territory, Queensland and Western Australia. The Northern Territory has considerably higher densities, raising questions about constraints on recovery in the other states. We examined broad-scale environmental influences on population abundance by modelling the species–environment relationships across northern Australia. The hypothesis-based models showed strong support for the linkage to (1) the ratio of total area of favourable wetland vegetation types (Melaleuca, grass and sedge) to total catchment area, (2) a measure of rainfall seasonality, namely the ratio of total precipitation in the coldest quarter to total precipitation in the warmest quarter of a year, and (3) the mean temperature in the coldest quarter of a year. On the other hand, we were unable to show any clear negative association with landscape modification, as indicated by the extent of high-impact land uses or human population density in catchments. We conclude that geographical variations in crocodile density are mostly attributable to differences in habitat quality rather than the management regimes adopted in the respective jurisdictions.

Regional scale nutrient modelling: exports to the Great Barrier Reef World Heritage Area

Clearing of native vegetation and replacement with cropping and grazing systems has increased nutrient exports to the Great Barrier Reef (GBR) to a level many times the natural rate. We present a technique for modelling nutrient transport, based on material budgets of river systems, and use it to identify the patterns and sources of nutrients exported. The outputs of the model can then be used to help prioritise catchment areas and land uses for management and assess various management options. Hillslope erosion is the largest source of particulate nutrients because of its dominance as a sediment source and the higher nutrient concentrations on surface soils. Dissolved nutrient fractions contribute 30% of total nitrogen and 15% of total phosphorus inputs. Spatial patterns show the elevated dissolved inorganic nitrogen export in the wetter catchments, and the dominance of particulate N and P from soil erosion in coastal areas. This study has identified catchments with high levels of contribution to exports and targeting these should be a priority.