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Ayari C, Alotaibi AA, Baashen MA, Perveen F, Almarri AH, Alotaibi KM, Abdelbaky MSM, Garcia-Granda S, Othmani A, Nasr CB, Mrad MH. A New Zn(II) Metal Hybrid Material of 5-Nitrobenzimidazolium Organic Cation (C 7H 6N 3O 2) 2[ZnCl 4]: Elaboration, Structure, Hirshfeld Surface, Spectroscopic, Molecular Docking Analysis, Electric and Dielectric Properties. MATERIALS (BASEL, SWITZERLAND) 2022; 15:7973. [PMID: 36431459 PMCID: PMC9697581 DOI: 10.3390/ma15227973] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/17/2022] [Revised: 10/09/2022] [Accepted: 10/12/2022] [Indexed: 06/16/2023]
Abstract
The slow solvent evaporation approach was used to create a single crystal of (C7H6N3O2)2[ZnCl4] at room temperature. Our compound has been investigated by single-crystal XRD which declares that the complex crystallizes in the monoclinic crystallographic system with the P21/c as a space group. The molecular arrangement of the compound can be described by slightly distorted tetrahedral ZnCl42- anionic entities and 5-nitrobenzimidazolium as cations, linked together by different non-covalent interaction types (H-bonds, Cl…Cl, π…π and C-H…π). Hirshfeld's surface study allows us to identify that the dominant contacts in the crystal building are H…Cl/Cl…H contacts (37.3%). FT-IR method was used to identify the different groups in (C7H6N3O2)2[ZnCl4]. Furthermore, impedance spectroscopy analysis in 393 ≤ T ≤ 438 K shows that the temperature dependence of DC conductivity follows Arrhenius' law. The frequency-temperature dependence of AC conductivity for the studied sample shows one region (Ea = 2.75 eV). In order to determine modes of interactions of compound with double stranded DNA, molecular docking simulations were performed at molecular level.
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Affiliation(s)
- Chaima Ayari
- Materials Chemistry Laboratory, Faculty of Sciences of Bizerte, University of Carthage, Zarzouna, Bizerte 7021, Tunisia
| | - Abdullah A. Alotaibi
- Department of Chemistry, College of Sciences and Humanities, Shaqra University, Ad-Dawadmi 11911, Saudi Arabia
| | - Mohammed A. Baashen
- Department of Chemistry, College of Sciences and Humanities, Shaqra University, Ad-Dawadmi 11911, Saudi Arabia
| | - Fouzia Perveen
- School of Interdisciplinary Engineering and Sciences (SINES), NUST, H-12, Islamabad 44000, Pakistan
| | - Abdulhadi H. Almarri
- Department of Chemistry, University College of Al-Wajah, University of Tabuk, Tabuk 71421, Saudi Arabia
| | - Khalid M. Alotaibi
- Department of Chemistry, College of Science, King Saud University, Riyadh 12271, Saudi Arabia
| | | | - Santiago Garcia-Granda
- Department of Physical and Analytical Chemistry, University of Oviedo-CINN, 33006 Oviedo, Spain
| | - Abdelhak Othmani
- Laboratory of Material Physics: Structures and Properties, LR01 ES15, Faculty of Sciences, University of Carthage, Zarzouna, Bizerte 7021, Tunisia
| | - Cherif Ben Nasr
- Materials Chemistry Laboratory, Faculty of Sciences of Bizerte, University of Carthage, Zarzouna, Bizerte 7021, Tunisia
| | - Mohamed Habib Mrad
- Materials Chemistry Laboratory, Faculty of Sciences of Bizerte, University of Carthage, Zarzouna, Bizerte 7021, Tunisia
- Department of Chemistry, College of Sciences and Humanities, Shaqra University, Ad-Dawadmi 11911, Saudi Arabia
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Hassen S, Zouaghi MO, Slimani I, Arfaoui Y, Namık Özdemir, Özdemir I, Gürbüz N, Mansour L, Gatri R, Hamdi N. Synthesis, crystal structures, DFT calculations, and catalytic application in hydrosilylation of acetophenone derivatives with triethylsilane of novel rhoduim-N-heterocyclic carbene (NHCs) complex. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133397] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Hassen S, Arfaoui Y, Robeyns K, Steenhaut T, Filinchuk Y, Klein A, Chebbi H. Architecture of a dinuclear Co(II) complex based on 3-amino-1,2,4-triazole-5-carboxylic acid: molecular structure, thermal behavior, optical properties, and DFT calculations. J COORD CHEM 2022. [DOI: 10.1080/00958972.2022.2090246] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Affiliation(s)
- Sabri Hassen
- Faculty of Sciences of Tunis, Laboratory of Characterizations, Applications and Modeling of Materials, University of Tunis El Manar, Tunis, Tunisia
| | - Youssef Arfaoui
- Faculty of Sciences of Tunis, Laboratory of Characterizations, Applications and Modeling of Materials, University of Tunis El Manar, Tunis, Tunisia
| | - Koen Robeyns
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain, Louvain-la-Neuve 1348, Belgium
| | - Timothy Steenhaut
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain, Louvain-la-Neuve 1348, Belgium
| | - Yaroslav Filinchuk
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain, Louvain-la-Neuve 1348, Belgium
| | - Axel Klein
- Faculty of Mathematics and Natural Sciences, Department of Chemistry, Institute for Inorganic Chemistry, University of Cologne, Cologne 50939, Germany
| | - Hammouda Chebbi
- Preparatory Institute for Engineering Studies of Tunis, University of Tunis, Montfleury, Tunis 1089, Tunisia
- Faculty of Sciences of Tunis, Laboratory of Materials, Crystal Chemistry and Applied Thermodynamics, University of Tunis El Manar, Tunis, Tunisia
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Garci F, Chebbi H, Rouzbeh N, Rochels L, Disch S, Klein A, Faouzi Zid M. Structure, optical and magnetic properties of the pyridinium cobaltate (C6H9N2)2[CoCl4]. Inorganica Chim Acta 2022. [DOI: 10.1016/j.ica.2022.121003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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Garci F, Chebbi H, Klein A, Zid MF. Crystal structure, vibrational spectra, optical properties and thermal behavior of the 1D perovskite (2-amino-4-methylpyridinium)trichlorocadmate(II) (C6H9N2)1∞[CdCl3]. J COORD CHEM 2022. [DOI: 10.1080/00958972.2021.2024171] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Fatma Garci
- Faculty of Sciences of Tunis, Laboratory of Materials, Crystal Chemistry and Applied Thermodynamics, University of Tunis El Manar, Tunis, Tunisia
| | - Hammouda Chebbi
- Faculty of Sciences of Tunis, Laboratory of Materials, Crystal Chemistry and Applied Thermodynamics, University of Tunis El Manar, Tunis, Tunisia
- Preparatory Institute for Engineering Studies of Tunis, University of Tunis, Tunis, Tunisia
| | - Axel Klein
- Faculty of Mathematics and Natural Sciences, Department of Chemistry, Institute for Inorganic Chemistry, University of Cologne, Cologne, Germany
| | - Mohamed Faouzi Zid
- Faculty of Sciences of Tunis, Laboratory of Materials, Crystal Chemistry and Applied Thermodynamics, University of Tunis El Manar, Tunis, Tunisia
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Synthesis, crystal structure, spectroscopic study and Hirshfeld surface analysis of [Ni(C6H8N2)3]Cl2.2(H2O) (1). J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2020.129123] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Hassen S, Chebbi H, Arfaoui Y, Robeyns K, Steenhaut T, Hermans S, Filinchuk Y. Spectroscopic and structural studies, thermal characterization, optical proprieties and theoretical investigation of 2-aminobenzimidazolium tetrachlorocobaltate(II). SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2020; 240:118612. [PMID: 32604047 DOI: 10.1016/j.saa.2020.118612] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2020] [Revised: 05/24/2020] [Accepted: 06/10/2020] [Indexed: 06/11/2023]
Abstract
In this study we present the crystal structure, spectroscopic and thermal behavior, Hirshfeld surface analysis, and DFT calculations of a new organic-inorganic hybrid compound (C7H8N3)2[CoCl4]. This compound crystallizes in the centrosymmetric space group P1¯. Single-crystal X-ray diffraction analysis indicates that structure consists of a succession of mixed layers formed by organic cations and inorganic anions parallel to the (001) plane and propagate according to the c-axis. Layers further are assembled into a 3D supramolecular architecture through N-H…Cl hydrogen bonds and π…π interactions. The peak positions of the experimental PXRD pattern are in agreement with the simulated ones from the crystal structure, indicating phase purity of the title compound. The presence of the different functional groups and the nature of their vibrations were identified by ATR-FTIR and FT-Raman spectroscopies. The tetrahedral environment of Co2+ was confirmed by UV-visible spectroscopy, where the spectrum shows three weak absorption bands in the visible range due to d-d electronic transitions 4A2(F) → 4T2(F), 4A2(F) → 4T1(F) and 4A2(F) → 4T1(P) typical of Co(II) coordination compounds. The direct and indirect optical band gap values were determined by Tauc method. The optimized structure and calculated vibrational frequencies were obtained by density functional theory (DFT) using B3LYP functional. TGA and DSC coupled to mass spectrometry (MS) experiments under argon atmosphere in the temperature range (25-950 °C) were carried out in order to determine the thermal stability of the title compound.
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Affiliation(s)
- S Hassen
- University of Tunis El Manar, Faculty of Sciences of Tunis, Laboratory of Characterizations, Applications and Modeling of Materials, 2092 El Manar II, Tunis, Tunisia
| | - H Chebbi
- University of Tunis, Preparatory Institute for Engineering Studies of Tunis, Street Jawaher Lel Nehru, 1089 Montfleury, Tunis, Tunisia; University of Tunis El Manar, Faculty of Sciences of Tunis, Laboratory of Materials, Crystal Chemistry and Applied Thermodynamics, 2092 El Manar II, Tunis, Tunisia.
| | - Y Arfaoui
- University of Tunis El Manar, Faculty of Sciences of Tunis, Laboratory of Characterizations, Applications and Modeling of Materials, 2092 El Manar II, Tunis, Tunisia
| | - K Robeyns
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain place L. Pasteur 1, 1348 Louvain-la-Neuve, Belgium
| | - T Steenhaut
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain place L. Pasteur 1, 1348 Louvain-la-Neuve, Belgium
| | - S Hermans
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain place L. Pasteur 1, 1348 Louvain-la-Neuve, Belgium
| | - Y Filinchuk
- Institute of Condensed Matter and Nanosciences, Université catholique de Louvain place L. Pasteur 1, 1348 Louvain-la-Neuve, Belgium
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Assembly and weak interactions in the crystal structure of 2-amino-4-(3-bromophenyl)-1,3,5-triazinobenzimidazolium chloride studied by X-ray diffraction, vibrational spectroscopy, Hirshfeld surface analysis and DFT calculations. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.11.054] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Wei XJ, Li YH, Qin ZB, Cui GH. Two zinc(II) coordination polymers for selective luminescence sensing of iron(III) ions and photocatalytic degradation of methylene blue. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.08.001] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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