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For: Chum WW, Ng KT, Shih RS, Au CH, Kwan HS. Gene expression studies of the dikaryotic mycelium and primordium of Lentinula edodes by serial analysis of gene expression. ACTA ACUST UNITED AC 2008;112:950-64. [PMID: 18555678 DOI: 10.1016/j.mycres.2008.01.028] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2007] [Revised: 01/16/2008] [Accepted: 01/24/2008] [Indexed: 02/02/2023]
Number Cited by Other Article(s)
1
Song X, Chen M, Zhao Y, Zhang M, Zhang L, Zhang D, Song C, Shang X, Tan Q. Multi-stage nuclear transcriptomic insights of morphogenesis and biparental role changes in Lentinula edodes. Appl Microbiol Biotechnol 2023:10.1007/s00253-023-12624-y. [PMID: 37439832 DOI: 10.1007/s00253-023-12624-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2023] [Revised: 05/24/2023] [Accepted: 05/26/2023] [Indexed: 07/14/2023]
2
Nagy L, Vonk P, Künzler M, Földi C, Virágh M, Ohm R, Hennicke F, Bálint B, Csernetics Á, Hegedüs B, Hou Z, Liu X, Nan S, Pareek M, Sahu N, Szathmári B, Varga T, Wu H, Yang X, Merényi Z. Lessons on fruiting body morphogenesis from genomes and transcriptomes of Agaricomycetes. Stud Mycol 2023;104:1-85. [PMID: 37351542 PMCID: PMC10282164 DOI: 10.3114/sim.2022.104.01] [Citation(s) in RCA: 11] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2021] [Accepted: 12/02/2022] [Indexed: 01/09/2024]  Open
3
Zhang L, Gong W, Li C, Shen N, Gui Y, Bian Y, Kwan HS, Cheung MK, Xiao Y. RNA-Seq-based high-resolution linkage map reveals the genetic architecture of fruiting body development in shiitake mushroom, Lentinula edodes. Comput Struct Biotechnol J 2021;19:1641-1653. [PMID: 33868600 PMCID: PMC8026754 DOI: 10.1016/j.csbj.2021.03.016] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2020] [Revised: 03/07/2021] [Accepted: 03/12/2021] [Indexed: 01/21/2023]  Open
4
Song T, Shen Y, Jin Q, Feng W, Fan L, Cai W. Comparative phosphoproteome analysis to identify candidate phosphoproteins involved in blue light-induced brown film formation in Lentinula edodes. PeerJ 2020;8:e9859. [PMID: 33384895 PMCID: PMC7751435 DOI: 10.7717/peerj.9859] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2020] [Accepted: 08/12/2020] [Indexed: 01/30/2023]  Open
5
Gong M, Wang Y, Zhang J, Zhao Y, Wan J, Shang J, Yang R, Wu Y, Li Y, Tan Q, Bao D. Chilling Stress Triggers VvAgo1-Mediated miRNA-Like RNA Biogenesis in Volvariella volvacea. Front Microbiol 2020;11:523593. [PMID: 33042047 PMCID: PMC7522536 DOI: 10.3389/fmicb.2020.523593] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2020] [Accepted: 08/21/2020] [Indexed: 12/11/2022]  Open
6
Kim JY, Kim DY, Park YJ, Jang MJ. Transcriptome analysis of the edible mushroom Lentinula edodes in response to blue light. PLoS One 2020;15:e0230680. [PMID: 32218597 PMCID: PMC7100940 DOI: 10.1371/journal.pone.0230680] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2019] [Accepted: 03/05/2020] [Indexed: 01/04/2023]  Open
7
SOUSA MADC, COSTA LMAS, PEREIRA TS, ZIED DC, RINKER DL, DIAS ES. Enzyme activity and biochemical changes during production of Lentinula edodes (Berk.) Pegler. FOOD SCIENCE AND TECHNOLOGY 2019. [DOI: 10.1590/fst.38517] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
8
Discovery of microRNA-like RNAs during early fruiting body development in the model mushroom Coprinopsis cinerea. PLoS One 2018;13:e0198234. [PMID: 30231028 PMCID: PMC6145500 DOI: 10.1371/journal.pone.0198234] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2018] [Accepted: 08/29/2018] [Indexed: 12/19/2022]  Open
9
Song HY, Kim DH, Kim JM. Comparative transcriptome analysis of dikaryotic mycelia and mature fruiting bodies in the edible mushroom Lentinula edodes. Sci Rep 2018;8:8983. [PMID: 29895888 PMCID: PMC5997629 DOI: 10.1038/s41598-018-27318-z] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2018] [Accepted: 05/31/2018] [Indexed: 02/08/2023]  Open
10
Xiang Q, Li J, Qin P, He M, Yu X, Zhao K, Zhang X, Ma M, Chen Q, Chen X, Zeng X, Gu Y. Identification and evaluation of reference genes for qRT-PCR studies in Lentinula edodes. PLoS One 2018;13:e0190226. [PMID: 29293626 PMCID: PMC5749753 DOI: 10.1371/journal.pone.0190226] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2017] [Accepted: 12/11/2017] [Indexed: 11/26/2022]  Open
11
Feng K, Wang LY, Liao DJ, Lu XP, Hu DJ, Liang X, Zhao J, Mo ZY, Li SP. Potential molecular mechanisms for fruiting body formation of Cordyceps illustrated in the case of Cordyceps sinensis. Mycology 2017;8:231-258. [PMID: 30123644 PMCID: PMC6059060 DOI: 10.1080/21501203.2017.1365314] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2017] [Accepted: 08/04/2017] [Indexed: 11/30/2022]  Open
12
Lentinula edodes Genome Survey and Postharvest Transcriptome Analysis. Appl Environ Microbiol 2017;83:AEM.02990-16. [PMID: 28314725 DOI: 10.1128/aem.02990-16] [Citation(s) in RCA: 55] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2016] [Accepted: 03/07/2017] [Indexed: 12/22/2022]  Open
13
León-Ramírez CG, Cabrera-Ponce JL, Martínez-Soto D, Sánchez-Arreguin A, Aréchiga-Carvajal ET, Ruiz-Herrera J. Transcriptomic analysis of basidiocarp development in Ustilago maydis (DC) Cda. Fungal Genet Biol 2017;101:34-45. [PMID: 28285895 DOI: 10.1016/j.fgb.2017.02.007] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2016] [Revised: 02/07/2017] [Accepted: 02/28/2017] [Indexed: 01/20/2023]
14
Gong WB, Li L, Zhou Y, Bian YB, Kwan HS, Cheung MK, Xiao Y. Genetic dissection of fruiting body-related traits using quantitative trait loci mapping in Lentinula edodes. Appl Microbiol Biotechnol 2016;100:5437-52. [PMID: 26875873 DOI: 10.1007/s00253-016-7347-5] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2015] [Revised: 01/18/2016] [Accepted: 01/22/2016] [Indexed: 11/28/2022]
15
Zhang J, Ren A, Chen H, Zhao M, Shi L, Chen M, Wang H, Feng Z. Transcriptome analysis and its application in identifying genes associated with fruiting body development in basidiomycete Hypsizygus marmoreus. PLoS One 2015;10:e0123025. [PMID: 25837428 PMCID: PMC4383556 DOI: 10.1371/journal.pone.0123025] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2014] [Accepted: 01/05/2015] [Indexed: 02/06/2023]  Open
16
The first set of expressed sequence tags (EST) from the medicinal mushroom Agaricus subrufescens delivers resource for gene discovery and marker development. Appl Microbiol Biotechnol 2014;98:7879-92. [PMID: 24917377 DOI: 10.1007/s00253-014-5844-y] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2014] [Revised: 05/15/2014] [Accepted: 05/19/2014] [Indexed: 10/25/2022]
17
Transcriptome analysis of candidate genes and signaling pathways associated with light-induced brown film formation in Lentinula edodes. Appl Microbiol Biotechnol 2013;97:4977-89. [DOI: 10.1007/s00253-013-4832-y] [Citation(s) in RCA: 58] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2012] [Revised: 02/27/2013] [Accepted: 03/03/2013] [Indexed: 01/10/2023]
18
Cheng CK, Au CH, Wilke SK, Stajich JE, Zolan ME, Pukkila PJ, Kwan HS. 5'-Serial Analysis of Gene Expression studies reveal a transcriptomic switch during fruiting body development in Coprinopsis cinerea. BMC Genomics 2013;14:195. [PMID: 23514374 PMCID: PMC3606632 DOI: 10.1186/1471-2164-14-195] [Citation(s) in RCA: 51] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2012] [Accepted: 03/08/2013] [Indexed: 12/02/2022]  Open
19
Wang M, Gu B, Huang J, Jiang S, Chen Y, Yin Y, Pan Y, Yu G, Li Y, Wong BHC, Liang Y, Sun H. Transcriptome and proteome exploration to provide a resource for the study of Agrocybe aegerita. PLoS One 2013;8:e56686. [PMID: 23418592 PMCID: PMC3572045 DOI: 10.1371/journal.pone.0056686] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2012] [Accepted: 01/14/2013] [Indexed: 01/02/2023]  Open
20
Eastwood DC, Herman B, Noble R, Dobrovin-Pennington A, Sreenivasaprasad S, Burton KS. Environmental regulation of reproductive phase change in Agaricus bisporus by 1-octen-3-ol, temperature and CO₂. Fungal Genet Biol 2013;55:54-66. [PMID: 23354075 DOI: 10.1016/j.fgb.2013.01.001] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2012] [Revised: 12/03/2012] [Accepted: 01/01/2013] [Indexed: 11/25/2022]
21
Wong KS, Huang Q, Au CH, Wang J, Kwan HS. Biodegradation of dyes and polyaromatic hydrocarbons by two allelic forms of Lentinula edodes laccase expressed from Pichia pastoris. BIORESOURCE TECHNOLOGY 2012;104:157-164. [PMID: 22130082 DOI: 10.1016/j.biortech.2011.10.097] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2011] [Revised: 10/26/2011] [Accepted: 10/28/2011] [Indexed: 05/31/2023]
22
Gene silencing of the Lentinula edodes lcc1 gene by expression of a homologous inverted repeat sequence. Microbiol Res 2011;166:484-93. [DOI: 10.1016/j.micres.2010.09.004] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2010] [Accepted: 09/25/2010] [Indexed: 11/23/2022]
23
Chum WWY, Kwan HS, Au CH, Kwok ISW, Fung YW. Cataloging and profiling genes expressed in Lentinula edodes fruiting body by massive cDNA pyrosequencing and LongSAGE. Fungal Genet Biol 2011;48:359-69. [PMID: 21281728 DOI: 10.1016/j.fgb.2011.01.009] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2009] [Revised: 12/29/2010] [Accepted: 01/23/2011] [Indexed: 11/25/2022]
24
Mutations in the Cc.rmt1 gene encoding a putative protein arginine methyltransferase alter developmental programs in the basidiomycete Coprinopsis cinerea. Curr Genet 2010;56:361-7. [PMID: 20495806 DOI: 10.1007/s00294-010-0307-1] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2010] [Revised: 04/23/2010] [Accepted: 05/06/2010] [Indexed: 10/19/2022]
25
The homologue of Lentinula edodes ctg1, a target for CDC5 and its interacting partner CIPB, from Coprinopsis cinerea is involved in fruitingbody morphogenesis of C. cinerea. MYCOSCIENCE 2009. [DOI: 10.1007/s10267-009-0489-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
26
Characterization of the post-harvest changes in gene transcription in the gill of the Lentinula edodes fruiting body. Curr Genet 2009;55:409-23. [PMID: 19488757 DOI: 10.1007/s00294-009-0255-9] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2009] [Revised: 05/07/2009] [Accepted: 05/13/2009] [Indexed: 01/19/2023]
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