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Peng X, Liu Z, Gao J, Zhang Y, Wang H, Li C, Lv X, Gao Y, Deng H, Zhao B, Gao T, Li H. Influence of Spider Silk Protein Structure on Mechanical and Biological Properties for Energetic Material Detection. Molecules 2024; 29:1025. [PMID: 38474537 PMCID: PMC10934110 DOI: 10.3390/molecules29051025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Revised: 02/21/2024] [Accepted: 02/22/2024] [Indexed: 03/14/2024] Open
Abstract
Spider silk protein, renowned for its excellent mechanical properties, biodegradability, chemical stability, and low immune and inflammatory response activation, consists of a core domain with a repeat sequence and non-repeating sequences at the N-terminal and C-terminal. In this review, we focus on the relationship between the silk structure and its mechanical properties, exploring the potential applications of spider silk materials in the detection of energetic materials.
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Affiliation(s)
- Xinying Peng
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Zhiyong Liu
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Junhong Gao
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Yuhao Zhang
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Hong Wang
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Cunzhi Li
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Xiaoqiang Lv
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Yongchao Gao
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Hui Deng
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Bin Zhao
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Ting Gao
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
| | - Huan Li
- Toxicology Research Center, Institute for Hygiene of Ordnance Industry, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China (Z.L.)
- Xi’an Key Laboratory of Toxicology and Biological Effects, NO. 12 Zhangbadong Road, Yanta District, Xi’an 710065, China
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Connor A, Zha RH, Koffas M. Production and secretion of recombinant spider silk in Bacillus megaterium. Microb Cell Fact 2024; 23:35. [PMID: 38279170 PMCID: PMC10821235 DOI: 10.1186/s12934-024-02304-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2023] [Accepted: 01/12/2024] [Indexed: 01/28/2024] Open
Abstract
BACKGROUND Silk proteins have emerged as versatile biomaterials with unique chemical and physical properties, making them appealing for various applications. Among them, spider silk, known for its exceptional mechanical strength, has attracted considerable attention. Recombinant production of spider silk represents the most promising route towards its scaled production; however, challenges persist within the upstream optimization of host organisms, including toxicity and low yields. The high cost of downstream cell lysis and protein purification is an additional barrier preventing the widespread production and use of spider silk proteins. Gram-positive bacteria represent an attractive, but underexplored, microbial chassis that may enable a reduction in the cost and difficulty of recombinant silk production through attributes that include, superior secretory capabilities, frequent GRAS status, and previously established use in industry. RESULTS In this study, we explore the potential of gram-positive hosts by engineering the first production and secretion of recombinant spider silk in the Bacillus genus. Using an industrially relevant B. megaterium host, it was found that the Sec secretion pathway enables secretory production of silk, however, the choice of signal sequence plays a vital role in successful secretion. Attempts at increasing secreted titers revealed that multiple translation initiation sites in tandem do not significantly impact silk production levels, contrary to previous findings for other gram-positive hosts and recombinant proteins. Notwithstanding, targeted amino acid supplementation in minimal media was found to increase production by 135% relative to both rich media and unaltered minimal media, yielding secretory titers of approximately 100 mg/L in flask cultures. CONCLUSION It is hypothesized that the supplementation strategy addressed metabolic bottlenecks, specifically depletion of ATP and NADPH within the central metabolism, that were previously observed for an E. coli host producing the same recombinant silk construct. Furthermore, this study supports the hypothesis that secretion mitigates the toxicity of the produced silk protein on the host organism and enhances host performance in glucose-based minimal media. While promising, future research is warranted to understand metabolic changes more precisely in the Bacillus host system in response to silk production, optimize signal sequences and promoter strengths, investigate the mechanisms behind the effect of tandem translation initiation sites, and evaluate the performance of this system within a bioreactor.
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Affiliation(s)
- Alexander Connor
- Department of Chemical and Biological Engineering, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA
- Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA
| | - R Helen Zha
- Department of Chemical and Biological Engineering, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA.
- Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA.
| | - Mattheos Koffas
- Department of Chemical and Biological Engineering, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA.
- Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA.
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3
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Li T, Kambanis J, Sorenson TL, Sunde M, Shen Y. From Fundamental Amyloid Protein Self-Assembly to Development of Bioplastics. Biomacromolecules 2024; 25:5-23. [PMID: 38147506 PMCID: PMC10777412 DOI: 10.1021/acs.biomac.3c01129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2023] [Revised: 12/03/2023] [Accepted: 12/04/2023] [Indexed: 12/28/2023]
Abstract
Proteins can self-assemble into a range of nanostructures as a result of molecular interactions. Amyloid nanofibrils, as one of them, were first discovered with regard to the relevance of neurodegenerative diseases but now have been exploited as building blocks to generate multiscale materials with designed functions for versatile applications. This review interconnects the mechanism of amyloid fibrillation, the current approaches to synthesizing amyloid protein-based materials, and the application in bioplastic development. We focus on the fundamental structures of self-assembled amyloid fibrils and how external factors can affect protein aggregation to optimize the process. Protein self-assembly is essentially the autonomous congregation of smaller protein units into larger, organized structures. Since the properties of the self-assembly can be manipulated by changing intrinsic factors and external conditions, protein self-assembly serves as an excellent building block for bioplastic development. Building on these principles, general processing methods and pathways from raw protein sources to mature state materials are proposed, providing a guide for the development of large-scale production. Additionally, this review discusses the diverse properties of protein-based amyloid nanofibrils and how they can be utilized as bioplastics. The economic feasibility of the protein bioplastics is also compared to conventional plastics in large-scale production scenarios, supporting their potential as sustainable bioplastics for future applications.
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Affiliation(s)
- Tianchen Li
- School
of Chemical and Biomolecular Engineering and Sydney Nano, The University of Sydney, PNR Building, Darlington NSW 2008, Australia
| | - Jordan Kambanis
- School
of Chemical and Biomolecular Engineering and Sydney Nano, The University of Sydney, PNR Building, Darlington NSW 2008, Australia
| | - Timothy L. Sorenson
- School
of Chemical and Biomolecular Engineering and Sydney Nano, The University of Sydney, PNR Building, Darlington NSW 2008, Australia
| | - Margaret Sunde
- School
of Medical Sciences and Sydney Nano, The
University of Sydney, Sydney NSW 2006, Australia
| | - Yi Shen
- School
of Chemical and Biomolecular Engineering and Sydney Nano, The University of Sydney, PNR Building, Darlington NSW 2008, Australia
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Saldanha DJ, Cai A, Dorval Courchesne NM. The Evolving Role of Proteins in Wearable Sweat Biosensors. ACS Biomater Sci Eng 2023; 9:2020-2047. [PMID: 34491052 DOI: 10.1021/acsbiomaterials.1c00699] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Sweat is an increasingly popular biological medium for fitness monitoring and clinical diagnostics. It contains an abundance of biological information and is available continuously and noninvasively. Sweat-sensing devices often employ proteins in various capacities to create skin-friendly matrices that accurately extract valuable and time-sensitive information from sweat. Proteins were first used in sensors as biorecognition elements in the form of enzymes and antibodies, which are now being tuned to operate at ranges relevant for sweat. In addition, a range of structural proteins, sometimes assembled in conjunction with polymers, can provide flexible and compatible matrices for skin sensors. Other proteins also naturally possess a range of functionalities─as adhesives, charge conductors, fluorescence emitters, and power generators─that can make them useful components in wearable devices. Here, we examine the four main components of wearable sweat sensors─the biorecognition element, the transducer, the scaffold, and the adhesive─and the roles that proteins have played so far, or promise to play in the future, in each component. On a case-by-case basis, we analyze the performance characteristics of existing protein-based devices, their applicable ranges of detection, their transduction mechanism and their mechanical properties. Thereby, we review and compare proteins that can readily be used in sweat sensors and others that will require further efforts to overcome design, stability or scalability challenges. Incorporating proteins in one or multiple components of sweat sensors could lead to the development and deployment of tunable, greener, and safer biosourced devices.
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Affiliation(s)
- Dalia Jane Saldanha
- Department of Chemical Engineering, McGill University, Montréal, Québec, Canada H3A 0C5
| | - Anqi Cai
- Department of Chemical Engineering, McGill University, Montréal, Québec, Canada H3A 0C5
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5
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Wu SD, Chuang WT, Ho JC, Wu HC, Hsu SH. Self-Healing of Recombinant Spider Silk Gel and Coating. Polymers (Basel) 2023; 15:polym15081855. [PMID: 37112001 PMCID: PMC10141599 DOI: 10.3390/polym15081855] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2023] [Revised: 04/08/2023] [Accepted: 04/10/2023] [Indexed: 04/29/2023] Open
Abstract
Self-healing properties, originating from the natural healing process, are highly desirable for the fitness-enhancing functionality of biomimetic materials. Herein, we fabricated the biomimetic recombinant spider silk by genetic engineering, in which Escherichia coli (E. coli) was employed as a heterologous expression host. The self-assembled recombinant spider silk hydrogel was obtained through the dialysis process (purity > 85%). The recombinant spider silk hydrogel with a storage modulus of ~250 Pa demonstrated autonomous self-healing and high strain-sensitive properties (critical strain ~50%) at 25 °C. The in situ small-angle X-ray scattering (in situ SAXS) analyses revealed that the self-healing mechanism was associated with the stick-slip behavior of the β-sheet nanocrystals (each of ~2-4 nm) based on the slope variation (i.e., ~-0.4 at 100%/200% strains, and ~-0.9 at 1% strain) of SAXS curves in the high q-range. The self-healing phenomenon may occur through the rupture and reformation of the reversible hydrogen bonding within the β-sheet nanocrystals. Furthermore, the recombinant spider silk as a dry coating material demonstrated self-healing under humidity as well as cell affinity. The electrical conductivity of the dry silk coating was ~0.4 mS/m. Neural stem cells (NSCs) proliferated on the coated surface and showed a 2.3-fold number expansion after 3 days of culture. The biomimetic self-healing recombinant spider silk gel and thinly coated surface may have good potential in biomedical applications.
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Affiliation(s)
- Shin-Da Wu
- Institute of Polymer Science and Engineering, National Taiwan University, Taipei 10617, Taiwan
| | - Wei-Tsung Chuang
- National Synchrotron Radiation Research Center (NSRRC), Hsinchu 30076, Taiwan
| | - Jo-Chen Ho
- Department of Biochemical Science and Technology, National Taiwan University, Taipei 10617, Taiwan
| | - Hsuan-Chen Wu
- Department of Biochemical Science and Technology, National Taiwan University, Taipei 10617, Taiwan
| | - Shan-Hui Hsu
- Institute of Polymer Science and Engineering, National Taiwan University, Taipei 10617, Taiwan
- Institute of Cellular and System Medicine, National Health Research Institutes, Miaoli 350, Taiwan
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6
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Rising A, Harrington MJ. Biological Materials Processing: Time-Tested Tricks for Sustainable Fiber Fabrication. Chem Rev 2023; 123:2155-2199. [PMID: 36508546 DOI: 10.1021/acs.chemrev.2c00465] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
There is an urgent need to improve the sustainability of the materials we produce and use. Here, we explore what humans can learn from nature about how to sustainably fabricate polymeric fibers with excellent material properties by reviewing the physical and chemical aspects of materials processing distilled from diverse model systems, including spider silk, mussel byssus, velvet worm slime, hagfish slime, and mistletoe viscin. We identify common and divergent strategies, highlighting the potential for bioinspired design and technology transfer. Despite the diversity of the biopolymeric fibers surveyed, we identify several common strategies across multiple systems, including: (1) use of stimuli-responsive biomolecular building blocks, (2) use of concentrated fluid precursor phases (e.g., coacervates and liquid crystals) stored under controlled chemical conditions, and (3) use of chemical (pH, salt concentration, redox chemistry) and physical (mechanical shear, extensional flow) stimuli to trigger the transition from fluid precursor to solid material. Importantly, because these materials largely form and function outside of the body of the organisms, these principles can more easily be transferred for bioinspired design in synthetic systems. We end the review by discussing ongoing efforts and challenges to mimic biological model systems, with a particular focus on artificial spider silks and mussel-inspired materials.
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Affiliation(s)
- Anna Rising
- Department of Biosciences and Nutrition, Karolinska Institutet, Huddinge 141 52, Sweden.,Department of Anatomy, Physiology and Biochemistry, Swedish University of Agricultural Sciences, Uppsala 750 07, Sweden
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7
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Connor A, Wigham C, Bai Y, Rai M, Nassif S, Koffas M, Zha RH. Novel insights into construct toxicity, strain optimization, and primary sequence design for producing recombinant silk fibroin and elastin-like peptide in E. coli. Metab Eng Commun 2023; 16:e00219. [PMID: 36825067 PMCID: PMC9941211 DOI: 10.1016/j.mec.2023.e00219] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2022] [Revised: 12/06/2022] [Accepted: 01/24/2023] [Indexed: 02/05/2023] Open
Abstract
Spider silk proteins (spidroins) are a remarkable class of biomaterials that exhibit a unique combination of high-value attributes and can be processed into numerous morphologies for targeted applications in diverse fields. Recombinant production of spidroins represents the most promising route towards establishing the industrial production of the material, however, recombinant spider silk production suffers from fundamental difficulties that includes low titers, plasmid instability, and translational inefficiencies. In this work, we sought to gain a deeper understanding of upstream bottlenecks that exist in the field through the production of a panel of systematically varied spidroin sequences in multiple E. coli strains. A restriction on basal expression and specific genetic mutations related to stress responses were identified as primary factors that facilitated higher titers of the recombinant silk constructs. Using these findings, a novel strain of E. coli was created that produces recombinant silk constructs at levels 4-33 times higher than standard BL21(DE3). However, these findings did not extend to a similar recombinant protein, an elastin-like peptide. It was found that the recombinant silk proteins, but not the elastin-like peptide, exert toxicity on the E. coli host system, possibly through their high degree of intrinsic disorder. Along with strain engineering, a bioprocess design that utilizes longer culturing times and attenuated induction was found to raise recombinant silk titers by seven-fold and mitigate toxicity. Targeted alteration to the primary sequence of the recombinant silk constructs was also found to mitigate toxicity. These findings identify multiple points of focus for future work seeking to further optimize the recombinant production of silk proteins and is the first work to identify the intrinsic disorder and subsequent toxicity of certain spidroin constructs as a primary factor related to the difficulties of production.
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Affiliation(s)
- Alexander Connor
- Department of Chemical and Biological Engineering, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA,Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA
| | - Caleb Wigham
- Department of Chemical and Biological Engineering, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA,Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA
| | - Yang Bai
- Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA
| | - Manish Rai
- Department of Chemical and Biological Engineering, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA,Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA
| | - Sebastian Nassif
- Department of Chemical and Biological Engineering, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA
| | - Mattheos Koffas
- Department of Chemical and Biological Engineering, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA,Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA,Corresponding author. Department of Chemical and Biological Engineering, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA.
| | - R. Helen Zha
- Department of Chemical and Biological Engineering, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA,Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA,Corresponding author. Department of Chemical and Biological Engineering, Rensselaer Polytechnic Institute, Troy, NY, 12180, USA.
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8
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Torres-Huerta AL, Antonio-Pérez A, García-Huante Y, Alcázar-Ramírez NJ, Rueda-Silva JC. Biomolecule-Based Optical Metamaterials: Design and Applications. BIOSENSORS 2022; 12:962. [PMID: 36354471 PMCID: PMC9688573 DOI: 10.3390/bios12110962] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Revised: 10/21/2022] [Accepted: 10/22/2022] [Indexed: 06/16/2023]
Abstract
Metamaterials are broadly defined as artificial, electromagnetically homogeneous structures that exhibit unusual physical properties that are not present in nature. They possess extraordinary capabilities to bend electromagnetic waves. Their size, shape and composition can be engineered to modify their characteristics, such as iridescence, color shift, absorbance at different wavelengths, etc., and harness them as biosensors. Metamaterial construction from biological sources such as carbohydrates, proteins and nucleic acids represents a low-cost alternative, rendering high quantities and yields. In addition, the malleability of these biomaterials makes it possible to fabricate an endless number of structured materials such as composited nanoparticles, biofilms, nanofibers, quantum dots, and many others, with very specific, invaluable and tremendously useful optical characteristics. The intrinsic characteristics observed in biomaterials make them suitable for biomedical applications. This review addresses the optical characteristics of metamaterials obtained from the major macromolecules found in nature: carbohydrates, proteins and DNA, highlighting their biosensor field use, and pointing out their physical properties and production paths.
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Affiliation(s)
- Ana Laura Torres-Huerta
- Escuela de Ingeniería y Ciencias, Tecnológico de Monterrey, Campus Estado de México, Av. Lago de Guadalupe KM 3.5, Margarita Maza de Juárez, Cd. López Mateos, Atizapán de Zaragoza 52926, Mexico
| | - Aurora Antonio-Pérez
- Escuela de Ingeniería y Ciencias, Tecnológico de Monterrey, Campus Estado de México, Av. Lago de Guadalupe KM 3.5, Margarita Maza de Juárez, Cd. López Mateos, Atizapán de Zaragoza 52926, Mexico
| | - Yolanda García-Huante
- Departamento de Ciencias Básicas, Unidad Profesional Interdisciplinaria en Ingeniería y Tecnologías Avanzadas, Instituto Politécnico Nacional (UPIITA-IPN), Mexico City 07340, Mexico
| | - Nayelhi Julieta Alcázar-Ramírez
- Escuela de Ingeniería y Ciencias, Tecnológico de Monterrey, Campus Estado de México, Av. Lago de Guadalupe KM 3.5, Margarita Maza de Juárez, Cd. López Mateos, Atizapán de Zaragoza 52926, Mexico
| | - Juan Carlos Rueda-Silva
- Escuela de Ingeniería y Ciencias, Tecnológico de Monterrey, Campus Estado de México, Av. Lago de Guadalupe KM 3.5, Margarita Maza de Juárez, Cd. López Mateos, Atizapán de Zaragoza 52926, Mexico
- Department of Genetics, University of Cambridge, Cambridge CB2 3EH, UK
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9
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Bittencourt DMDC, Oliveira P, Michalczechen-Lacerda VA, Rosinha GMS, Jones JA, Rech EL. Bioengineering of spider silks for the production of biomedical materials. Front Bioeng Biotechnol 2022; 10:958486. [PMID: 36017345 PMCID: PMC9397580 DOI: 10.3389/fbioe.2022.958486] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Accepted: 07/14/2022] [Indexed: 11/13/2022] Open
Abstract
Spider silks are well known for their extraordinary mechanical properties. This characteristic is a result of the interplay of composition, structure and self-assembly of spider silk proteins (spidroins). Advances in synthetic biology have enabled the design and production of spidroins with the aim of biomimicking the structure-property-function relationships of spider silks. Although in nature only fibers are formed from spidroins, in vitro, scientists can explore non-natural morphologies including nanofibrils, particles, capsules, hydrogels, films or foams. The versatility of spidroins, along with their biocompatible and biodegradable nature, also placed them as leading-edge biological macromolecules for improved drug delivery and various biomedical applications. Accordingly, in this review, we highlight the relationship between the molecular structure of spider silk and its mechanical properties and aims to provide a critical summary of recent progress in research employing recombinantly produced bioengineered spidroins for the production of innovative bio-derived structural materials.
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Affiliation(s)
- Daniela Matias de C. Bittencourt
- Embrapa Genetic Resources and Biotechnology, National Institute of Science and Technology—Synthetic Biology, Brasília, DF, Brazil
- *Correspondence: Elibio L. Rech, ; Daniela Matias de C. Bittencourt,
| | - Paula Oliveira
- Department of Biology, Utah State University, Logan, UT, United States
| | | | - Grácia Maria Soares Rosinha
- Embrapa Genetic Resources and Biotechnology, National Institute of Science and Technology—Synthetic Biology, Brasília, DF, Brazil
| | - Justin A. Jones
- Department of Biology, Utah State University, Logan, UT, United States
| | - Elibio L. Rech
- Embrapa Genetic Resources and Biotechnology, National Institute of Science and Technology—Synthetic Biology, Brasília, DF, Brazil
- *Correspondence: Elibio L. Rech, ; Daniela Matias de C. Bittencourt,
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10
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Arndt T, Greco G, Schmuck B, Bunz J, Shilkova O, Francis J, Pugno NM, Jaudzems K, Barth A, Johansson J, Rising A. Engineered Spider Silk Proteins for Biomimetic Spinning of Fibers with Toughness Equal to Dragline Silks. ADVANCED FUNCTIONAL MATERIALS 2022; 32:2200986. [PMID: 36505976 PMCID: PMC9720699 DOI: 10.1002/adfm.202200986] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/24/2022] [Revised: 03/10/2022] [Indexed: 06/17/2023]
Abstract
Spider silk is the toughest fiber found in nature, and bulk production of artificial spider silk that matches its mechanical properties remains elusive. Development of miniature spider silk proteins (mini-spidroins) has made large-scale fiber production economically feasible, but the fibers' mechanical properties are inferior to native silk. The spider silk fiber's tensile strength is conferred by poly-alanine stretches that are zipped together by tight side chain packing in β-sheet crystals. Spidroins are secreted so they must be void of long stretches of hydrophobic residues, since such segments get inserted into the endoplasmic reticulum membrane. At the same time, hydrophobic residues have high β-strand propensity and can mediate tight inter-β-sheet interactions, features that are attractive for generation of strong artificial silks. Protein production in prokaryotes can circumvent biological laws that spiders, being eukaryotic organisms, must obey, and the authors thus design mini-spidroins that are predicted to more avidly form stronger β-sheets than the wildtype protein. Biomimetic spinning of the engineered mini-spidroins indeed results in fibers with increased tensile strength and two fiber types display toughness equal to native dragline silks. Bioreactor expression and purification result in a protein yield of ≈9 g L-1 which is in line with requirements for economically feasible bulk scale production.
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Affiliation(s)
- Tina Arndt
- Department of Biosciences and NutritionKarolinska InstitutetNeoHuddinge14183Sweden
| | - Gabriele Greco
- Laboratory for Bioinspired, Bionic, Nano, Meta, Materials & MechanicsDepartment of Civil, Environmental and Mechanical EngineeringUniversity of TrentoVia Mesiano 77Trento38123Italy
- Department of AnatomyPhysiology and BiochemistrySwedish University of Agricultural SciencesUppsala75007Sweden
| | - Benjamin Schmuck
- Department of Biosciences and NutritionKarolinska InstitutetNeoHuddinge14183Sweden
- Department of AnatomyPhysiology and BiochemistrySwedish University of Agricultural SciencesUppsala75007Sweden
| | - Jessica Bunz
- Department of Biosciences and NutritionKarolinska InstitutetNeoHuddinge14183Sweden
- Present address:
Spiber Technologies ABAlbaNova University CenterSE‐10691StockholmSweden
| | - Olga Shilkova
- Department of Biosciences and NutritionKarolinska InstitutetNeoHuddinge14183Sweden
| | - Juanita Francis
- Department of Biosciences and NutritionKarolinska InstitutetNeoHuddinge14183Sweden
| | - Nicola M Pugno
- Laboratory for Bioinspired, Bionic, Nano, Meta, Materials & MechanicsDepartment of Civil, Environmental and Mechanical EngineeringUniversity of TrentoVia Mesiano 77Trento38123Italy
- School of Engineering and Materials SciencesQueen Mary University of LondonMile End RoadLondonE1 4NSUK
| | - Kristaps Jaudzems
- Department of Physical Organic ChemistryLatvian Institute of Organic SynthesisRigaLV‐1006Latvia
| | - Andreas Barth
- Department of Biochemistry and BiophysicsThe Arrhenius Laboratories for Natural SciencesStockholm UniversityStockholm10691Sweden
| | - Jan Johansson
- Department of Biosciences and NutritionKarolinska InstitutetNeoHuddinge14183Sweden
| | - Anna Rising
- Department of Biosciences and NutritionKarolinska InstitutetNeoHuddinge14183Sweden
- Department of AnatomyPhysiology and BiochemistrySwedish University of Agricultural SciencesUppsala75007Sweden
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11
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Cruz MV, Shah DU, Warner NC, McCune JA, Scherman OA. Facile, Energy-Efficient Microscale Fibrillation of Polyacrylamides under Ambient Conditions. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2022; 34:e2201577. [PMID: 35365942 DOI: 10.1002/adma.202201577] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2022] [Indexed: 06/14/2023]
Abstract
Insight into fiber formation can provide new rationale for the design and preparation of fibers with programmed mechanical properties. While synthetic bioinspired fibers have shown impressive tensile properties, the fiber formation process remains poorly understood. Moreover, these systems are highly complex and their formation is environmentally and economically costly. Controlled fiber formation under ambient conditions from polyacrylamide solutions with properties comparable to natural fibers such as wool and coir is demonstrated. Photopolymerization and subsequent microscale fibrillation of different acrylamides in water/ethanol mixtures yield a simple and energy-efficient route to fiber formation. This strategy reduces required processing energy by two-to-three orders of magnitude. Through extensive experimental elucidation, insight into precise fiber forming conditions of polymeric solutions is achieved. Ethanol is utilized as a chain transfer agent to control the molecular weight of the polyacrylamides, and the entanglement regimes of the solutions are determined through rheological characterization showing fiber formation above the entanglement concentration. Unique from previously reported hydrogel microfibers, it is shown that fibers with good mechanical properties can be obtained without the need for composites or crosslinkers. The reported approach offers a platform for fiber formation under ambient conditions with molecular-level understanding of their assembly.
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Affiliation(s)
- Menandro V Cruz
- Melville Laboratory for Polymer Synthesis, Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, CB2 1EW, UK
| | - Darshil U Shah
- Department of Architecture, University of Cambridge, Cambridge, CB2 1PX, UK
| | - Nina C Warner
- Melville Laboratory for Polymer Synthesis, Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, CB2 1EW, UK
| | - Jade A McCune
- Melville Laboratory for Polymer Synthesis, Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, CB2 1EW, UK
| | - Oren A Scherman
- Melville Laboratory for Polymer Synthesis, Yusuf Hamied Department of Chemistry, University of Cambridge, Cambridge, CB2 1EW, UK
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12
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Li G, Tian Q, Wu W, Yang S, Wu Q, Zhao Y, Wang J, Zhou X, Wang K, Ren L, Zhao J, Liu Q. Bio-Inspired 4D Printing of Dynamic Spider Silks. Polymers (Basel) 2022; 14:polym14102069. [PMID: 35631954 PMCID: PMC9147410 DOI: 10.3390/polym14102069] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2022] [Revised: 05/10/2022] [Accepted: 05/17/2022] [Indexed: 11/16/2022] Open
Abstract
Spider silks exhibit excellent mechanical properties and have promising application prospects in engineering fields. Because natural spider silk fibers cannot be manufactured on a large scale, researchers have attempted to fabricate bio-inspired spider silks. However, the fabrication of bio-inspired spider silks with dynamically tunable mechanical properties and stimulation–response characteristics remains a challenge. Herein, the 4D printing of shape memory polyurethane is employed to produce dynamic bio-inspired spider silks. The bio-inspired spider silks have two types of energy-absorbing units that can be adjusted, one by means of 4D printing with predefined nodes, and the other through different stimulation methods to make the bio-inspired spider silks contract and undergo spiral deformation. The shape morphing behaviors of bio-inspired spider silks are programmed via pre-stress assemblies enabled by 4D printing. The energy-absorbing units of bio-inspired spider silks can be dynamically adjusted owing to stress release generated with the stimuli of temperature or humidity. Therefore, the mechanical properties of bio-inspired spider silks can be controlled to change dynamically. This can further help in developing applications of bio-inspired spider silks in engineering fields with dynamic changes of environment.
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Affiliation(s)
- Guiwei Li
- Advanced Materials Additive Manufacturing ((AM)2) Lab, School of Mechanical and Aerospace Engineering, Jilin University, Changchun 130025, China; (G.L.); (Q.T.); (W.W.); (S.Y.); (Y.Z.); (J.W.); (L.R.); (J.Z.)
- Key Laboratory of Bionic Engineering (Ministry of Education), Jilin University, Changchun 130022, China; (Q.W.); (X.Z.); (K.W.)
| | - Qi Tian
- Advanced Materials Additive Manufacturing ((AM)2) Lab, School of Mechanical and Aerospace Engineering, Jilin University, Changchun 130025, China; (G.L.); (Q.T.); (W.W.); (S.Y.); (Y.Z.); (J.W.); (L.R.); (J.Z.)
| | - Wenzheng Wu
- Advanced Materials Additive Manufacturing ((AM)2) Lab, School of Mechanical and Aerospace Engineering, Jilin University, Changchun 130025, China; (G.L.); (Q.T.); (W.W.); (S.Y.); (Y.Z.); (J.W.); (L.R.); (J.Z.)
| | - Shida Yang
- Advanced Materials Additive Manufacturing ((AM)2) Lab, School of Mechanical and Aerospace Engineering, Jilin University, Changchun 130025, China; (G.L.); (Q.T.); (W.W.); (S.Y.); (Y.Z.); (J.W.); (L.R.); (J.Z.)
| | - Qian Wu
- Key Laboratory of Bionic Engineering (Ministry of Education), Jilin University, Changchun 130022, China; (Q.W.); (X.Z.); (K.W.)
| | - Yihang Zhao
- Advanced Materials Additive Manufacturing ((AM)2) Lab, School of Mechanical and Aerospace Engineering, Jilin University, Changchun 130025, China; (G.L.); (Q.T.); (W.W.); (S.Y.); (Y.Z.); (J.W.); (L.R.); (J.Z.)
| | - Jiaqing Wang
- Advanced Materials Additive Manufacturing ((AM)2) Lab, School of Mechanical and Aerospace Engineering, Jilin University, Changchun 130025, China; (G.L.); (Q.T.); (W.W.); (S.Y.); (Y.Z.); (J.W.); (L.R.); (J.Z.)
| | - Xueli Zhou
- Key Laboratory of Bionic Engineering (Ministry of Education), Jilin University, Changchun 130022, China; (Q.W.); (X.Z.); (K.W.)
| | - Kunyang Wang
- Key Laboratory of Bionic Engineering (Ministry of Education), Jilin University, Changchun 130022, China; (Q.W.); (X.Z.); (K.W.)
| | - Luquan Ren
- Advanced Materials Additive Manufacturing ((AM)2) Lab, School of Mechanical and Aerospace Engineering, Jilin University, Changchun 130025, China; (G.L.); (Q.T.); (W.W.); (S.Y.); (Y.Z.); (J.W.); (L.R.); (J.Z.)
- Key Laboratory of Bionic Engineering (Ministry of Education), Jilin University, Changchun 130022, China; (Q.W.); (X.Z.); (K.W.)
| | - Ji Zhao
- Advanced Materials Additive Manufacturing ((AM)2) Lab, School of Mechanical and Aerospace Engineering, Jilin University, Changchun 130025, China; (G.L.); (Q.T.); (W.W.); (S.Y.); (Y.Z.); (J.W.); (L.R.); (J.Z.)
- School of Mechanical Engineering and Automation, Northeastern University, Shenyang 110004, China
| | - Qingping Liu
- Key Laboratory of Bionic Engineering (Ministry of Education), Jilin University, Changchun 130022, China; (Q.W.); (X.Z.); (K.W.)
- Correspondence:
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13
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Computing within bacteria: Programming of bacterial behavior by means of a plasmid encoding a perceptron neural network. Biosystems 2022; 213:104608. [DOI: 10.1016/j.biosystems.2022.104608] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2021] [Revised: 12/07/2021] [Accepted: 01/11/2022] [Indexed: 01/12/2023]
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14
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Britt DW. Plug-and-play bioinspired seed coatings. NATURE FOOD 2021; 2:456-457. [PMID: 37117675 DOI: 10.1038/s43016-021-00325-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/30/2023]
Affiliation(s)
- David W Britt
- Department of Biological Engineering, Utah State University, Logan, UT, USA.
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15
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Oliveira PE, Chen D, Bell BE, Harris TI, Walker C, Zhang H, Grob B, Lewis RV, Jones JA. The next generation of protein super-fibres: robust recombinant production and recovery of hagfish intermediate filament proteins with fibre spinning and mechanical-structural characterizations. Microb Biotechnol 2021; 14:1976-1989. [PMID: 34191387 PMCID: PMC8449652 DOI: 10.1111/1751-7915.13869] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2020] [Revised: 05/05/2021] [Accepted: 06/04/2021] [Indexed: 11/29/2022] Open
Abstract
Native hagfish intermediate filament proteins have impressive mechanical properties. However, using these native fibres for any application is impractical, necessitating their recombinant production. In the only literature report on the proteins (denoted α and ɣ), heterologous expression levels, using E. coli, were low and no attempts were made to optimize expression, explore wet‐spinning, or spin the two proteins individually into fibres. Reported here is the high production (~8 g l−1 of dry protein) of the hagfish intermediate filament proteins, with yields orders of magnitude higher (325–1000×) than previous reports. The proteins were spun into fibres individually and in their native‐like 1:1 ratio. For all fibres, the hallmark α‐helix to β‐sheet conversion occurred after draw‐processing. The native‐like 1:1 ratio fibres achieved the highest average tensile strength in this study at nearly 200 MPa with an elastic modulus of 5.7 GPa, representing the highest tensile strength reported for these proteins without chemical cross‐linking. Interestingly, the recombinant α protein achieved nearly the same mechanical properties when spun as a homopolymeric fibre. These results suggest that varying the two protein ratios beyond the natural 1:1 ratio will allow a high degree of tunability. With robust heterologous expression and purification established, optimizing fibre spinning will be accelerated compared to difficult to produce proteins such as spider silks.
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Affiliation(s)
- Paula E Oliveira
- Department of Biology, Utah State University, Logan, UT, 84322, USA
| | - Dong Chen
- Department of Biology, Utah State University, Logan, UT, 84322, USA
| | - Brianne E Bell
- Department of Biology, Utah State University, Logan, UT, 84322, USA
| | - Thomas I Harris
- Department of Biology, Utah State University, Logan, UT, 84322, USA
| | - Caleb Walker
- Department of Biological Engineering, Utah State University, Logan, UT, 84322, USA
| | - Haixia Zhang
- Key Laboratory of Biotechnology and Bioengineering of State Ethnic Affairs Commission, Biomedical Research Center, Northwest Minzu University, Lanzhou, Gansu, China
| | - Brittany Grob
- Department of Biology, Utah State University, Logan, UT, 84322, USA
| | - Randolph V Lewis
- Department of Biology, Utah State University, Logan, UT, 84322, USA.,Department of Biological Engineering, Utah State University, Logan, UT, 84322, USA
| | - Justin A Jones
- Department of Biology, Utah State University, Logan, UT, 84322, USA.,Department of Biological Engineering, Utah State University, Logan, UT, 84322, USA
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16
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Whittall DR, Baker KV, Breitling R, Takano E. Host Systems for the Production of Recombinant Spider Silk. Trends Biotechnol 2021; 39:560-573. [PMID: 33051051 DOI: 10.1016/j.tibtech.2020.09.007] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2020] [Revised: 09/16/2020] [Accepted: 09/17/2020] [Indexed: 11/18/2022]
Abstract
Spider silk is renowned for its impressive mechanical properties. It is one of the strongest known biomaterials, possessing mechanical properties that outmatch both steel and Kevlar. However, the farming of spiders for their silk is unfeasible. Consequently, production of recombinant spider silk proteins (spidroins) in more amenable hosts is an exciting field of research. For large-scale production to be viable, a heterologous silk production system that is both highly efficient and cost effective is essential. Genes encoding recombinant spidroin have been expressed in bacterial, yeast, insect, and mammalian cells, in addition to many other platforms. This review discusses the recent advances in exploiting an increasingly diverse range of host platforms in the heterologous production of recombinant spidroins.
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Affiliation(s)
- Dominic R Whittall
- Manchester Institute of Biotechnology, Manchester Synthetic Biology Research Centre SYNBIOCHEM, Department of Chemistry, The University of Manchester, Manchester, M1 7DN, UK
| | - Katherine V Baker
- Manchester Institute of Biotechnology, Manchester Synthetic Biology Research Centre SYNBIOCHEM, Department of Chemistry, The University of Manchester, Manchester, M1 7DN, UK
| | - Rainer Breitling
- Manchester Institute of Biotechnology, Manchester Synthetic Biology Research Centre SYNBIOCHEM, Department of Chemistry, The University of Manchester, Manchester, M1 7DN, UK
| | - Eriko Takano
- Manchester Institute of Biotechnology, Manchester Synthetic Biology Research Centre SYNBIOCHEM, Department of Chemistry, The University of Manchester, Manchester, M1 7DN, UK.
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17
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Gu Y, Yu L, Mou J, Wu D, Zhou P, Xu M. Mechanical properties and application analysis of spider silk bionic material. E-POLYMERS 2020. [DOI: 10.1515/epoly-2020-0049] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
AbstractSpider silk is a kind of natural biomaterial with superior performance. Its mechanical properties and biocompatibility are incomparable with those of other natural and artificial materials. This article first summarizes the structure and the characteristics of natural spider silk. It shows the great research value of spider silk and spider silk bionic materials. Then, the development status of spider silk bionic materials is reviewed from the perspectives of material mechanical properties and application. The part of the material characteristics mainly describes the biocomposites based on spider silk proteins and spider silk fibers, nanomaterials and man-made fiber materials based on spider silk and spider-web structures. The principles and characteristics of new materials and their potential applications in the future are described. In addition, from the perspective of practical applications, the latest application of spider silk biomimetic materials in the fields of medicine, textiles, and sensors is reviewed, and the inspiration, feasibility, and performance of finished products are briefly introduced and analyzed. Finally, the research directions and future development trends of spider silk biomimetic materials are prospected.
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Affiliation(s)
- Yunqing Gu
- College of Metrology & Measurement Engineering, China Jiliang University, Hangzhou, 310018, China
| | - Lingzhi Yu
- College of Metrology & Measurement Engineering, China Jiliang University, Hangzhou, 310018, China
| | - Jiegang Mou
- College of Metrology & Measurement Engineering, China Jiliang University, Hangzhou, 310018, China
| | - Denghao Wu
- College of Metrology & Measurement Engineering, China Jiliang University, Hangzhou, 310018, China
| | - Peijian Zhou
- College of Metrology & Measurement Engineering, China Jiliang University, Hangzhou, 310018, China
| | - Maosen Xu
- College of Metrology & Measurement Engineering, China Jiliang University, Hangzhou, 310018, China
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18
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Mu X, Fitzpatrick V, Kaplan DL. From Silk Spinning to 3D Printing: Polymer Manufacturing using Directed Hierarchical Molecular Assembly. Adv Healthc Mater 2020; 9:e1901552. [PMID: 32109007 PMCID: PMC7415583 DOI: 10.1002/adhm.201901552] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2019] [Revised: 12/18/2019] [Indexed: 12/25/2022]
Abstract
Silk spinning offers an evolution-based manufacturing strategy for industrial polymer manufacturing, yet remains largely inaccessible as the manufacturing mechanisms in biological and synthetic systems, especially at the molecular level, are fundamentally different. The appealing characteristics of silk spinning include the sustainable sourcing of the protein material, the all-aqueous processing into fibers, and the unique material properties of silks in various formats. Substantial progress has been made to mimic silk spinning in artificial manufacturing processes, despite the gap between natural and artificial systems. This report emphasizes the universal spinning conditions utilized by both spiders and silkworms to generate silk fibers in nature, as a scientific and technical framework for directing molecular assembly into high-performance structures. The preparation of regenerated silk feedstocks and mimicking native spinning conditions in artificial manufacturing are discussed, as is progress and challenges in fiber spinning and 3D printing of silk-composites. Silk spinning is a biomimetic model for advanced and sustainable artificial polymer manufacturing, offering benefits in biomedical applications for tissue scaffolds and implantable devices.
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Affiliation(s)
- Xuan Mu
- Department of Biomedical Engineering, Tufts University, Medford, MA, 02155, USA
| | - Vincent Fitzpatrick
- Department of Biomedical Engineering, Tufts University, Medford, MA, 02155, USA
| | - David L Kaplan
- Department of Biomedical Engineering, Tufts University, Medford, MA, 02155, USA
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19
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Greco G, Francis J, Arndt T, Schmuck B, G. Bäcklund F, Barth A, Johansson J, M. Pugno N, Rising A. Properties of Biomimetic Artificial Spider Silk Fibers Tuned by PostSpin Bath Incubation. Molecules 2020; 25:E3248. [PMID: 32708777 PMCID: PMC7397010 DOI: 10.3390/molecules25143248] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2020] [Revised: 07/10/2020] [Accepted: 07/13/2020] [Indexed: 11/17/2022] Open
Abstract
Efficient production of artificial spider silk fibers with properties that match its natural counterpart has still not been achieved. Recently, a biomimetic process for spinning recombinant spider silk proteins (spidroins) was presented, in which important molecular mechanisms involved in native spider silk spinning were recapitulated. However, drawbacks of these fibers included inferior mechanical properties and problems with low resistance to aqueous environments. In this work, we show that ≥5 h incubation of the fibers, in a collection bath of 500 mM NaAc and 200 mM NaCl, at pH 5 results in fibers that do not dissolve in water or phosphate buffered saline, which implies that the fibers can be used for applications that involve wet/humid conditions. Furthermore, incubation in the collection bath improved the strain at break and was associated with increased β-sheet content, but did not affect the fiber morphology. In summary, we present a simple way to improve artificial spider silk fiber strain at break and resistance to aqueous solvents.
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Affiliation(s)
- Gabriele Greco
- Laboratory of Bio-Inspired, Bionic, Nano, Meta, Materials & Mechanics, Department of Civil, Environmental and Mechanical Engineering, University of Trento, Via Mesiano 77, 38123 Trento, Italy;
| | - Juanita Francis
- Department of Neurobiology, Care Sciences and Society, Karolinska Institutet, Neo, 14186 Huddinge, Sweden; (J.F.); (T.A.); (B.S.); (F.G.B.); (J.J.)
| | - Tina Arndt
- Department of Neurobiology, Care Sciences and Society, Karolinska Institutet, Neo, 14186 Huddinge, Sweden; (J.F.); (T.A.); (B.S.); (F.G.B.); (J.J.)
| | - Benjamin Schmuck
- Department of Neurobiology, Care Sciences and Society, Karolinska Institutet, Neo, 14186 Huddinge, Sweden; (J.F.); (T.A.); (B.S.); (F.G.B.); (J.J.)
| | - Fredrik G. Bäcklund
- Department of Neurobiology, Care Sciences and Society, Karolinska Institutet, Neo, 14186 Huddinge, Sweden; (J.F.); (T.A.); (B.S.); (F.G.B.); (J.J.)
| | - Andreas Barth
- Department of Biochemistry and Biophysics, The Arrhenius Laboratories for Natural Sciences, Stockholm University, 10691 Stockholm, Sweden;
| | - Jan Johansson
- Department of Neurobiology, Care Sciences and Society, Karolinska Institutet, Neo, 14186 Huddinge, Sweden; (J.F.); (T.A.); (B.S.); (F.G.B.); (J.J.)
| | - Nicola M. Pugno
- Laboratory of Bio-Inspired, Bionic, Nano, Meta, Materials & Mechanics, Department of Civil, Environmental and Mechanical Engineering, University of Trento, Via Mesiano 77, 38123 Trento, Italy;
- School of Engineering and Materials Science, Queen Mary University of London, Mile End Road, London E1 4NS, UK
| | - Anna Rising
- Department of Neurobiology, Care Sciences and Society, Karolinska Institutet, Neo, 14186 Huddinge, Sweden; (J.F.); (T.A.); (B.S.); (F.G.B.); (J.J.)
- Department of Anatomy, Physiology and Biochemistry, Swedish University of Agricultural Sciences, 75007 Uppsala, Sweden
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20
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Cai H, Chen G, Yu H, Tang Y, Xiong S, Qi X. One-step heating strategy for efficient solubilization of recombinant spider silk protein from inclusion bodies. BMC Biotechnol 2020; 20:37. [PMID: 32650749 PMCID: PMC7350728 DOI: 10.1186/s12896-020-00630-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2020] [Accepted: 07/02/2020] [Indexed: 11/18/2022] Open
Abstract
Background Spider silk is a proteinaceous fiber with remarkable mechanical properties spun from spider silk proteins (spidroins). Engineering spidroins have been successfully produced in a variety of heterologous hosts and the most widely used expression system is Escherichia coli (E. coli). So far, recombinantly expressed spidroins often form insoluble inclusion bodies (IBs), which will often be dissolved under extremely harsh conditions in a traditional manner, e.g. either 8 mol/L urea or 6 mol/L guanidine hydrochloride, highly risking to poor recovery of bioactive proteins as well as unexpected precipitations during dialysis process. Results Here, we present a mild solubilization strategy—one-step heating method to solubilize spidroins from IBs, with combining spidroins’ high thermal stability with low concentration of urea. A 430-aa recombinant protein (designated as NM) derived from the minor ampullate spidroin of Araneus ventricosus was expressed in E. coli, and the recombinant proteins were mainly present in insoluble fraction as IBs. The isolated IBs were solubilized parallelly by both traditional urea-denatured method and one-step heating method, respectively. The solubilization efficiency of NM IBs in Tris-HCl pH 8.0 containing 4 mol/L urea by one-step heating method was already comparable to that of 7 mol/L urea with using traditional urea-denatured method. The effects of buffer, pH and temperature conditions on NM IBs solubilization of one-step heating method were evaluated, respectively, based on which the recommended conditions are: heating temperature 70–90 °C for 20 min, pH 7.0–10, urea concentration 2–4 mol/L in normal biological buffers. The recombinant NM generated via the one-step heating method held the potential functions with self-assembling into sphere nanoparticles with smooth morphology. Conclusions The one-step heating method introduced here efficiently solubilizes IBs under relatively mild conditions compared to the traditional ones, which might be important for the downstream applications; however, this protocol should be pursued carefully in terms of urea-induced modification sensitive applications. Further, this method can be applied under broad buffer, pH and temperature conditions, conferring the potential to apply to other thermal stable proteins.
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Affiliation(s)
- Hui Cai
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou, 215123, Jiangsu, China
| | - Gefei Chen
- Department of Neurobiology, Care Sciences and Society, Center for Alzheimer Research, Division of Neurogeriatrics, Karolinska Institutet, 14157, Huddinge, Sweden
| | - Hairui Yu
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou, 215123, Jiangsu, China
| | - Ying Tang
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou, 215123, Jiangsu, China
| | - Sidong Xiong
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou, 215123, Jiangsu, China.
| | - Xingmei Qi
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou, 215123, Jiangsu, China.
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21
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Abstract
Spider web proteins are unique materials created by nature that, considering the combination of their properties, do not have analogues among natural or human-created materials. Obtaining significant amounts of these proteins from natural sources is not feasible. Biotechnological manufacturing in heterological systems is complicated by the very high molecular weight of spidroins and their specific amino acid composition. Obtaining recombinant analogues of spidroins in heterological systems, mainly in bacteria and yeast, has become a compromise solution. Because they can self-assemble, these proteins can form various materials, such as fibers, films, 3D-foams, hydrogels, tubes, and microcapsules. The effectiveness of spidroin hydrogels in deep wound healing, as 3D scaffolds for bone tissue regeneration and as oriented fibers for axon growth and nerve tissue regeneration, was demonstrated in animal models. The possibility to use spidroin micro- and nanoparticles for drug delivery was demonstrated, including the use of modified spidroins for virus-free DNA delivery into animal cell nuclei. In the past few years, significant interest has arisen concerning the use of these materials as biocompatible and biodegradable soft optics to construct photonic crystal super lenses and fiber optics and as soft electronics to use in triboelectric nanogenerators. This review summarizes the latest achievements in the field of spidroin production, the creation of materials based on them, the study of these materials as a scaffold for the growth, proliferation, and differentiation of various types of cells, and the prospects for using these materials for medical applications (e.g., tissue engineering, drug delivery, coating medical devices), soft optics, and electronics. Accumulated data suggest the use of recombinant spidroins in medical practice in the near future.
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Affiliation(s)
- Vladimir G Debabov
- State Research Institute for Genetics and Selection of Industrial Microorganisms of National Research Center "Kurchatov Institute" (NRC "Kurchatov Institute"-GOSNIIGENETIKA), Moscow 117545, Russia
| | - Vladimir G Bogush
- State Research Institute for Genetics and Selection of Industrial Microorganisms of National Research Center "Kurchatov Institute" (NRC "Kurchatov Institute"-GOSNIIGENETIKA), Moscow 117545, Russia
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Leem JW, Fraser MJ, Kim YL. Transgenic and Diet-Enhanced Silk Production for Reinforced Biomaterials: A Metamaterial Perspective. Annu Rev Biomed Eng 2020; 22:79-102. [PMID: 32160010 DOI: 10.1146/annurev-bioeng-082719-032747] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Silk fibers, which are protein-based biopolymers produced by spiders and silkworms, are fascinating biomaterials that have been extensively studied for numerous biomedical applications. Silk fibers often have remarkable physical and biological properties that typical synthetic materials do not exhibit. These attributes have prompted a wide variety of silk research, including genetic engineering, biotechnological synthesis, and bioinspired fiber spinning, to produce silk proteins on a large scale and to further enhance their properties. In this review, we describe the basic properties of spider silk and silkworm silk and the important production methods for silk proteins. We discuss recent advances in reinforced silk using silkworm transgenesis and functional additive diets with a focus on biomedical applications. We also explain that reinforced silk has an analogy with metamaterials such that user-designed atypical responses can be engineered beyond what naturally occurring materials offer. These insights into reinforced silk can guide better engineering of superior synthetic biomaterials and lead to discoveries of unexplored biological and medical applications of silk.
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Affiliation(s)
- Jung Woo Leem
- Weldon School of Biomedical Engineering, Purdue University, West Lafayette, Indiana 47907, USA
| | - Malcolm J Fraser
- Department of Biological Sciences, University of Notre Dame, Notre Dame, Indiana 46556, USA.,Eck Institute for Global Health, University of Notre Dame, Notre Dame, Indiana 46556, USA
| | - Young L Kim
- Weldon School of Biomedical Engineering, Purdue University, West Lafayette, Indiana 47907, USA.,Purdue University Center for Cancer Research, Regenstrief Center for Healthcare Engineering, and Purdue Quantum Science and Engineering Institute, West Lafayette, Indiana 47907, USA;
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Duigou T, du Lac M, Carbonell P, Faulon JL. RetroRules: a database of reaction rules for engineering biology. Nucleic Acids Res 2020; 47:D1229-D1235. [PMID: 30321422 PMCID: PMC6323975 DOI: 10.1093/nar/gky940] [Citation(s) in RCA: 44] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2018] [Accepted: 10/09/2018] [Indexed: 01/03/2023] Open
Abstract
RetroRules is a database of reaction rules for metabolic engineering (https://retrorules.org). Reaction rules are generic descriptions of chemical reactions that can be used in retrosynthesis workflows in order to enumerate all possible biosynthetic routes connecting a target molecule to its precursors. The use of such rules is becoming increasingly important in the context of synthetic biology applied to de novo pathway discovery and in systems biology to discover underground metabolism due to enzyme promiscuity. Here, we provide for the first time a complete set containing >400 000 stereochemistry-aware reaction rules extracted from public databases and expressed in the community-standard SMARTS (SMIRKS) format, augmented by a rule representation at different levels of specificity (the atomic environment around the reaction center). Such numerous representations of reactions expand natural chemical diversity by predicting de novo reactions of promiscuous enzymes.
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Affiliation(s)
- Thomas Duigou
- Micalis Institute, INRA, AgroParisTech, Université Paris-Saclay, 78350 Jouy-en-Josas, France
| | - Melchior du Lac
- Micalis Institute, INRA, AgroParisTech, Université Paris-Saclay, 78350 Jouy-en-Josas, France
| | - Pablo Carbonell
- SYNBIOCHEM Centre, Manchester Institute of Biotechnology, University of Manchester, Manchester M1 7DN, UK
| | - Jean-Loup Faulon
- Micalis Institute, INRA, AgroParisTech, Université Paris-Saclay, 78350 Jouy-en-Josas, France.,SYNBIOCHEM Centre, Manchester Institute of Biotechnology, University of Manchester, Manchester M1 7DN, UK.,CNRS-UMR8030/Laboratoire iSSB, Université Paris-Saclay, Évry 91000, France
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24
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Opportunities for Improving the Environmental Profile of Silk Cocoon Production under Brazilian Conditions. SUSTAINABILITY 2020. [DOI: 10.3390/su12083214] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Brazilian silk production is amongst the five largest in the world. Nonetheless, there is no life cycle assessment study on silk cocoon production and its upstream processes, pertaining to the mulberry production (fundamental upstream process for silk production), in the existing literature. The objective of this study was to identify opportunities to improve the environmental profile of mulberry and silk cocoon production under Brazilian conditions. To that end, a life cycle assessment was conducted for the core processes of mulberry and silk cocoon production and upstream processes of raw material production, using the ReCiPe method for life cycle impact assessment using nine impact categories. Overall, the mulberry production showed greater impacts than the cocoon production for the impact categories analyzed. A few opportunities for improving the environmental profile of mulberry and silk cocoon production under Brazilian conditions included replacing the Kraft paper used to cover the rearing beds, replacing the standard tractor used to fetch mulberry leaves, replacing light bulbs, conducting a more sustainable mulberry and cocoon production, and setting a reverse logistics system for plastic and paper packaging waste. Nevertheless, many of these measures are long-term strategies. Besides, many of them need further economic feasibility assessment.
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25
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Peng CA, Kozubowski L, Marcotte WR. Advances in Plant-Derived Scaffold Proteins. FRONTIERS IN PLANT SCIENCE 2020; 11:122. [PMID: 32161608 PMCID: PMC7052361 DOI: 10.3389/fpls.2020.00122] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2019] [Accepted: 01/27/2020] [Indexed: 05/13/2023]
Abstract
Scaffold proteins form critical biomatrices that support cell adhesion and proliferation for regenerative medicine and drug screening. The increasing demand for such applications urges solutions for cost effective and sustainable supplies of hypoallergenic and biocompatible scaffold proteins. Here, we summarize recent efforts in obtaining plant-derived biosynthetic spider silk analogue and the extracellular matrix protein, collagen. Both proteins are composed of a large number of tandem block repeats, which makes production in bacterial hosts challenging. Furthermore, post-translational modification of collagen is essential for its function which requires co-transformation of multiple copies of human prolyl 4-hydroxylase. We discuss our perspectives on how the GAANTRY system could potentially assist the production of native-sized spider dragline silk proteins and prolyl hydroxylated collagen. The potential of recombinant scaffold proteins in drug delivery and drug discovery is also addressed.
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Bowen CH, Dai B, Sargent CJ, Bai W, Ladiwala P, Feng H, Huang W, Kaplan DL, Galazka JM, Zhang F. Recombinant Spidroins Fully Replicate Primary Mechanical Properties of Natural Spider Silk. Biomacromolecules 2018; 19:3853-3860. [DOI: 10.1021/acs.biomac.8b00980] [Citation(s) in RCA: 103] [Impact Index Per Article: 17.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Affiliation(s)
| | | | | | | | | | | | - Wenwen Huang
- Department of Biomedical Engineering, Tufts University, Medford, Massachusetts 02155, United States
| | - David L. Kaplan
- Department of Biomedical Engineering, Tufts University, Medford, Massachusetts 02155, United States
| | - Jonathan M. Galazka
- Space Biosciences Division, Ames Research Center, National Aeronautics and Space Administration, Moffett Field, California 94035, United States
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