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Gim S, Hong SJ, Reynolds Losin EA, Woo CW. Spatiotemporal integration of contextual and sensory information within the cortical hierarchy in human pain experience. PLoS Biol 2024; 22:e3002910. [PMID: 39536050 DOI: 10.1371/journal.pbio.3002910] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2024] [Accepted: 10/22/2024] [Indexed: 11/16/2024] Open
Abstract
Pain is not a mere reflection of noxious input. Rather, it is constructed through the dynamic integration of current predictions with incoming sensory input. However, the temporal dynamics of the behavioral and neural processes underpinning this integration remain elusive. In the current study involving 59 human participants, we identified a series of brain mediators that integrated cue-induced expectations with noxious inputs into ongoing pain predictions using a semicircular scale designed to capture rating trajectories. Temporal mediation analysis revealed that during the early-to-mid stages of integration, the frontoparietal and dorsal attention network regions, such as the lateral prefrontal, premotor, and parietal cortex, mediated the cue effects. Conversely, during the mid-to-late stages of integration, the somatomotor network regions mediated the effects of stimulus intensity, suggesting that the integration occurs along the cortical hierarchy from the association to sensorimotor brain systems. Our findings advance the understanding of how the brain integrates contextual and sensory information into pain experience over time.
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Affiliation(s)
- Suhwan Gim
- Center for Neuroscience Imaging Research, Institute for Basic Science, Suwon, South Korea
- Department of Biomedical Engineering, Sungkyunkwan University, Suwon, South Korea
- Department of Intelligent Precision Healthcare Convergence, Sungkyunkwan University, Suwon, South Korea
| | - Seok-Jun Hong
- Center for Neuroscience Imaging Research, Institute for Basic Science, Suwon, South Korea
- Department of Biomedical Engineering, Sungkyunkwan University, Suwon, South Korea
- Department of Intelligent Precision Healthcare Convergence, Sungkyunkwan University, Suwon, South Korea
- Center for the Developing Brain, Child Mind Institute, New York, New York State, United States of America
- Life-inspired Neural Network for Prediction and Optimization Research Group, Suwon, South Korea
| | - Elizabeth A Reynolds Losin
- Department of Psychology, University of Miami, Coral Gables, Florida, United States of America
- Department of Biobehavioral Health, Pennsylvania State University, University Park, Pennsylvania, United States of America
| | - Choong-Wan Woo
- Center for Neuroscience Imaging Research, Institute for Basic Science, Suwon, South Korea
- Department of Biomedical Engineering, Sungkyunkwan University, Suwon, South Korea
- Department of Intelligent Precision Healthcare Convergence, Sungkyunkwan University, Suwon, South Korea
- Life-inspired Neural Network for Prediction and Optimization Research Group, Suwon, South Korea
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Oh S, Kim S, Lee JE, Park BY, Hye Won J, Park H. Multimodal analysis of disease onset in Alzheimer's disease using Connectome, Molecular, and genetics data. Neuroimage Clin 2024; 43:103660. [PMID: 39197213 PMCID: PMC11393605 DOI: 10.1016/j.nicl.2024.103660] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2024] [Revised: 08/23/2024] [Accepted: 08/23/2024] [Indexed: 09/01/2024]
Abstract
Alzheimer's disease (AD) and its related age at onset (AAO) are highly heterogeneous, due to the inherent complexity of the disease. They are affected by multiple factors, such as neuroimaging and genetic predisposition. Multimodal integration of various data types is necessary; however, it has been nontrivial due to the high dimensionality of each modality. We aimed to identify multimodal biomarkers of AAO in AD using an extended version of sparse canonical correlation analysis, in which we integrated two imaging modalities, functional magnetic resonance imaging (fMRI) and positron emission tomography (PET), and genetic data in the form of single-nucleotide polymorphisms (SNPs) obtained from the Alzheimer's disease neuroimaging initiative database. These three modalities cover low-to-high-level complementary information and offer multiscale insights into the AAO. We identified multivariate markers of AAO in AD using fMRI, PET, and SNP. Furthermore, the markers identified were largely consistent with those reported in the existing literature. In particular, our serial mediation analysis suggests that genetic variants influence the AAO in AD by indirectly affecting brain connectivity by mediation of amyloid-beta protein accumulation, supporting a plausible path in existing research. Our approach provides comprehensive biomarkers related to AAO in AD and offers novel multimodal insights into AD.
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Affiliation(s)
- Sewook Oh
- Department of Electrical and Computer Engineering, Sungkyunkwan University, Suwon, Republic of Korea
| | - Sunghun Kim
- Department of Electrical and Computer Engineering, Sungkyunkwan University, Suwon, Republic of Korea; Department of Artificial Intelligence, Sungkyunkwan University, Suwon, Republic of Korea; Center for Neuroscience Imaging Research, Institute for Basic Science, Suwon, Republic of Korea
| | - Jong-Eun Lee
- Department of Electrical and Computer Engineering, Sungkyunkwan University, Suwon, Republic of Korea; Center for Neuroscience Imaging Research, Institute for Basic Science, Suwon, Republic of Korea
| | - Bo-Yong Park
- Center for Neuroscience Imaging Research, Institute for Basic Science, Suwon, Republic of Korea; Department of Brain and Cognitive Engineering, Korea University, Seoul, Republic of Korea
| | - Ji Hye Won
- Department of Computer Engineering, Pukyong National University, Busan, Republic of Korea
| | - Hyunjin Park
- Department of Electrical and Computer Engineering, Sungkyunkwan University, Suwon, Republic of Korea; Department of Artificial Intelligence, Sungkyunkwan University, Suwon, Republic of Korea; Center for Neuroscience Imaging Research, Institute for Basic Science, Suwon, Republic of Korea.
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Wang Y, Wang Y, Wang H, Ma L, Eickhoff SB, Madsen KH, Chu C, Fan L. Spatio-molecular profiles shape the human cerebellar hierarchy along the sensorimotor-association axis. Cell Rep 2024; 43:113770. [PMID: 38363683 DOI: 10.1016/j.celrep.2024.113770] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2023] [Revised: 12/27/2023] [Accepted: 01/25/2024] [Indexed: 02/18/2024] Open
Abstract
Cerebellar involvement in both motor and non-motor functions manifests in specific regions of the human cerebellum, revealing the functional heterogeneity within it. One compelling theory places the heterogeneity within the cerebellar functional hierarchy along the sensorimotor-association (SA) axis. Despite extensive neuroimaging studies, evidence for the cerebellar SA axis from different modalities and scales was lacking. Thus, we establish a significant link between the cerebellar SA axis and spatio-molecular profiles. Utilizing the gene set variation analysis, we find the intermediate biological principles the significant genes leveraged to scaffold the cerebellar SA axis. Interestingly, we find these spatio-molecular profiles notably associated with neuropsychiatric dysfunction and recent evolution. Furthermore, cerebello-cerebral interactions at genetic and functional connectivity levels mirror the cerebral cortex and cerebellum's SA axis. These findings can provide a deeper understanding of how the human cerebellar SA axis is shaped and its role in transitioning from sensorimotor to association functions.
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Affiliation(s)
- Yaping Wang
- Sino-Danish Center, University of Chinese Academy of Sciences, Beijing 100190, China; Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China
| | - Yufan Wang
- Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China
| | - Haiyan Wang
- Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China
| | - Liang Ma
- Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China
| | - Simon B Eickhoff
- Institute of Neuroscience and Medicine (INM-7: Brain and Behaviour), Research Centre Jülich, 52425 Jülich, Germany; Institute of Systems Neuroscience, Heinrich Heine University Düsseldorf, 40225 Düsseldorf, Germany
| | - Kristoffer Hougaard Madsen
- Sino-Danish Center, University of Chinese Academy of Sciences, Beijing 100190, China; Department of Applied Mathematics and Computer Science, Technical University of Denmark, 2800 Kongens Lyngby, Denmark; Danish Research Centre for Magnetic Resonance, Centre for Functional and Diagnostic Imaging and Research, Copenhagen University Hospital-Amager and Hvidovre, 2650 Hvidovre, Denmark
| | - Congying Chu
- Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China.
| | - Lingzhong Fan
- Sino-Danish Center, University of Chinese Academy of Sciences, Beijing 100190, China; Brainnetome Center, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China; CAS Center for Excellence in Brain Science and Intelligence Technology, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China; School of Health and Life Sciences, University of Health and Rehabilitation Sciences, Qingdao 266000, China.
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Betzel RF, Faskowitz J, Sporns O. Living on the edge: network neuroscience beyond nodes. Trends Cogn Sci 2023; 27:1068-1084. [PMID: 37716895 PMCID: PMC10592364 DOI: 10.1016/j.tics.2023.08.009] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Revised: 07/14/2023] [Accepted: 08/10/2023] [Indexed: 09/18/2023]
Abstract
Network neuroscience has emphasized the connectional properties of neural elements - cells, populations, and regions. This has come at the expense of the anatomical and functional connections that link these elements to one another. A new perspective - namely one that emphasizes 'edges' - may prove fruitful in addressing outstanding questions in network neuroscience. We highlight one recently proposed 'edge-centric' method and review its current applications, merits, and limitations. We also seek to establish conceptual and mathematical links between this method and previously proposed approaches in the network science and neuroimaging literature. We conclude by presenting several avenues for future work to extend and refine existing edge-centric analysis.
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Affiliation(s)
- Richard F Betzel
- Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN 47405, USA; Cognitive Science Program, Indiana University, Bloomington, IN 47405, USA; Program in Neuroscience, Indiana University, Bloomington, IN 47405, USA; Network Science Institute, Indiana University, Bloomington, IN 47405, USA.
| | - Joshua Faskowitz
- Section on Functional Imaging Methods, National Institute of Mental Health, Bethesda, MD, USA
| | - Olaf Sporns
- Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN 47405, USA; Cognitive Science Program, Indiana University, Bloomington, IN 47405, USA; Program in Neuroscience, Indiana University, Bloomington, IN 47405, USA; Network Science Institute, Indiana University, Bloomington, IN 47405, USA
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Simpson-Kent IL, Gataviņš MM, Tooley UA, Boroshok AL, McDermott CL, Park AT, Delgado Reyes L, Bathelt J, Tisdall MD, Mackey AP. Multilayer network associations between the exposome and childhood brain development. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.10.23.563611. [PMID: 37961103 PMCID: PMC10634748 DOI: 10.1101/2023.10.23.563611] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/15/2023]
Abstract
Growing up in a high poverty neighborhood is associated with elevated risk for academic challenges and health problems. Here, we take a data-driven approach to exploring how measures of children's environments relate to the development of their brain structure and function in a community sample of children between the ages of 4 and 10 years. We constructed exposomes including measures of family socioeconomic status, children's exposure to adversity, and geocoded measures of neighborhood socioeconomic status, crime, and environmental toxins. We connected the exposome to two structural measures (cortical thickness and surface area, n = 170) and two functional measures (participation coefficient and clustering coefficient, n = 130). We found dense connections within exposome and brain layers and sparse connections between exposome and brain layers. Lower family income was associated with thinner visual cortex, consistent with the theory that accelerated development is detectable in early-developing regions. Greater neighborhood incidence of high blood lead levels was associated with greater segregation of the default mode network, consistent with evidence that toxins are deposited into the brain along the midline. Our study demonstrates the utility of multilayer network analysis to bridge environmental and neural explanatory levels to better understand the complexity of child development.
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Affiliation(s)
- Ivan L. Simpson-Kent
- Institute of Psychology, Developmental and Educational Psychology Unit, Leiden University, Leiden, the Netherlands
- Department of Psychology, University of Pennsylvania, Philadelphia, PA, USA
| | - Mārtiņš M. Gataviņš
- Department of Psychology, University of Pennsylvania, Philadelphia, PA, USA
- Lifespan Brain Institute, Children’s Hospital of Philadelphia, Philadelphia, PA, USA
| | - Ursula A. Tooley
- Department of Psychology, University of Pennsylvania, Philadelphia, PA, USA
- Department of Neuroscience, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
- Department of Psychiatry, Washington University in St. Louis, USA
- Department of Neurology, Washington University in St. Louis, USA
| | - Austin L. Boroshok
- Department of Psychology, University of Pennsylvania, Philadelphia, PA, USA
| | | | - Anne T. Park
- Department of Psychology, University of Pennsylvania, Philadelphia, PA, USA
| | | | - Joe Bathelt
- Department of Psychology, Royal Holloway, University of London, Egham, Surrey, United Kingdom
| | - M. Dylan Tisdall
- Department of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA
| | - Allyson P. Mackey
- Department of Psychology, University of Pennsylvania, Philadelphia, PA, USA
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Gong ZQ, Zuo XN. Connectivity gradients in spontaneous brain activity at multiple frequency bands. Cereb Cortex 2023; 33:9718-9728. [PMID: 37381580 PMCID: PMC10656950 DOI: 10.1093/cercor/bhad238] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Revised: 06/11/2023] [Accepted: 06/12/2023] [Indexed: 06/30/2023] Open
Abstract
The intrinsic organizational structure of the brain is reflected in spontaneous brain oscillations. Its functional integration and segregation hierarchy have been discovered in space by leveraging gradient approaches to low-frequency functional connectivity. This hierarchy of brain oscillations has not yet been fully understood, since previous studies have mainly concentrated on the brain oscillations from a single limited frequency range (~ 0.01-0.1 Hz). In this work, we extended the frequency range and performed gradient analysis across multiple frequency bands of fast resting-state fMRI signals from the Human Connectome Project and condensed a frequency-rank cortical map of the highest gradient. We found that the coarse skeletons of the functional organization hierarchy are generalizable across the multiple frequency bands. Beyond that, the highest integration levels of connectivity vary in the frequency domain across different large-scale brain networks. These findings are replicated in another independent dataset and demonstrated that different brain networks can integrate information at varying rates, indicating the significance of examining the intrinsic architecture of spontaneous brain activity from the perspective of multiple frequency bands.
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Affiliation(s)
- Zhu-Qing Gong
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing 100875, China
- Developmental Population Neuroscience Center, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China
| | - Xi-Nian Zuo
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing 100875, China
- Developmental Population Neuroscience Center, IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China
- National Basic Science Data Center, Beijing 100190, China
- Institute of Psychology, Chinese Academy of Sciences, Beijing 100101, China
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