Molecular structure and quantum descriptors of cefradine by using vibrational spectroscopy (IR and Raman), NBO, AIM, chemical reactivity and molecular docking

Long-Acting Antibacterial Hydrogels Constructed by Interface-Induced Directional Assembly

Self-assembled supermolecular hydrogels of therapeutic agents without structural modification are of great significance in biomedical applications. Nevertheless, the complex conformations and elusive interactions of therapeutic molecules limit the controlled assembly of hydrogels. Molecules at the interface might have different arrangements and assemblies compared to those in bulk aqueous solution, which could potentially alter the selectivity of supramolecular polymorphs. However, this effect is still not well understood. Here, we demonstrate the interface-induced self-assembly of fibers for hydrogels, which is distinct from the spherical aggregates in the bulk aqueous solution, using cephradine (CEP) as a model compound. This phenomenon is caused by the packing of anisotropic molecules at the interface, and it can be applied to control the supramolecular polymorphism for the direct self-assembly of hydrogels of therapeutic agents. The interface-induced hydrogel exhibits a high degree of adjustable release and a long-acting bactericidal effect.

New tetrahydroisoquinoline-4-carbonitrile derivatives as potent agents against cyclin-dependent kinases, crystal structures, and computational studies

The synthesis of two new hexahydroisoquinoline-4-carbonitrile derivatives (3a and 3b) is reported along with spectroscopic data and their crystal structures. In compound 3a, the intramolecular O-H···O hydrogen bond constraints the acetyl and hydroxyl groups to be syn. In the crystal, inversion dimers are generated by C-H···O hydrogen bonds and are connected into layers parallel to (10-1) by additional C-H···O hydrogen bonds. The layers are stacked with Cl···S contacts 0.17 Å less than the sum of the respective van der Waals radii. The conformation of the compound 3b is partially determined by the intramolecular O-H···O hydrogen bond. A puckering analysis of the tetrahydroisoquinoline unit was performed. In the crystal, O-H···O and C-H···O hydrogen bonds together with C-H···π(ring) interactions form layers parallel to (01-1) which pack with normal van der Waals interactions. To understand the binding efficiency and stability of the title molecules, molecular docking, and 100 ns dynamic simulation analyses were performed with CDK5A1. To rationalize their structure-activity relationship(s), a DFT study at the B3LYP/6-311++G** theoretical level was also done. The 3D Hirshfled surfaces were also taken to investigate the crystal packings of both compounds. In addition, their ADMET properties were explored.Communicated by Ramaswamy H. Sarma.

The chemical adsorption effect of surface enhanced Raman spectroscopy of nitrobenzene and aniline using the density functional theory

Nitrobenzene and Aniline are representatives of the nitro or amino compounds of benzene, mainly used in the manufacture of dyes, spices, medicines, and so on. Extensive use of Nitrobenzene and Aniline may cause pesticide residue pollution and have carcinogenic effects on organisms. In this paper, the Nitrobenzene and Aniline single molecules and their complexes with gold nanoparticles are studied theoretically by Raman spectroscopy, the surface-enhanced Raman spectroscopy (SERS) and the density functional theory (DFT) simulations. Selective binding of gold nanoparticles (AuNPs) to the analyte was used to study the molecular electrostatic potential (MEP), frontier molecular orbital (FMO) and the Raman activity spectra of Nitrobenzene and Aniline, as well as the Raman activity spectrum of the complexes. The most electronegative sites of Nitrobenzene and Aniline are found in the MEP and the hypothesis that these sites might be the adsorption sites of Nitrobenzene/Aniline molecules at the gold surface. At the same time, the MEP of the Nitrobenzene/Aniline complexes also prove the existence of the charge transfer effect between Nitrobenzene/Aniline and Au. The FMO energy gap of Nitrobenzene/Aniline is 0.18983 eV and 0.18953 eV, respectively, and which, after adding the Au₃ clusters, change to 0.03376 eV and 0.0797 eV, respectively, indicating that the Nitrobenzene/Aniline-Au₃ complexes have stronger chemical activities and are more prone to the charge transfer effects. The electrophilic indices of Nitrobenzene (0.17921 eV) and Aniline (0.05635 eV) are calculated and analyzed, as well as that of Nitrobenzene/Aniline-Au₃ complexes after adding the Au₃ atomic clusters, 0.80819 eV and 0.19819 eV, respectively. The obvious increasing trend in the electrophilic indices of the Nitrobenzene/Aniline-Au₃ complexes indicate their stronger biological activities and more prone to chemical reactions. The chemisorption of Nitrobenzene/Aniline and gold nanoparticles complexes is studied by the SERS, and the Raman formation of the complexes at different binding sites of Nitrobenzene/Aniline and Nitrobenzene/Aniline-Au₃ is well explained by the surface selection rule. The reason for the selective enhancement of the spectral peaks presented in the Raman activity spectrum is calculated, and the enhancement factor of the chemical enhancement due to the charge transfer effect is calculated as well. The reason for the peak offset in the SERS spectrum to the conventional Raman spectrum is explained.

Synthesis, crystal structure, and a molecular modeling approach to identify effective antiviral hydrazide derivative against the main protease of SARS-CoV-2

In the fall of 2019, a new type of coronavirus took place in Wuhan city, China, and rapidly spread across the world and urges the scientific community to develop antiviral therapeutic agents. In our effort we have synthesized a new hydrazide derivative, (E)-N'-(1-(4-bromophenyl)ethylidene)-2-(6-methoxynaphthalen-2-yl)propanehydrazide for this purpose because of its potential inhibitory proprieties. The asymmetric unit of the title molecule consists of two independent molecules differing noticeably in conformation. In the crystal, the independent molecules are linked by N-H···O and C-H···O hydrogen bonds and C-H···π(ring) interactions into helical chains extending along the b-axis direction. The chains are further joined by additional C-H···π(ring) interactions into the full 3-D structure. To obtain a structure-activity relationship, the DFT-NBO analysis is performed to study the intrinsic electronic properties of the title compound. Molecular modeling studies were also conducted to examine the binding affinity of the compound for the SARS-CoV-2 main protease enzyme and to determine intermolecular binding interactions. The compound revealed a stable binding mode at the enzyme active pocket with a binding energy value of -8.1 kcal/mol. Further, stable dynamics were revealed for the enzyme-compound complex and reported highly favorable binding energies. The net MMGBSA binding energy of the complex is -37.41 kcal/mol while the net MMPBSA binding energy is -40.5 kcal/mol. Overall, the compound disclosed the strongest bond of ing the main protease enzyme and might be a good lead for further structural optimization.

Raman spectral analysis for rapid determination of zearalenone and alpha-zearalanol

Mycotoxins, including zearalenone, are important natural products produced by fungi that occasionally contaminate agricultural commodities and pose serious health risks to consumers of food and feed. Zearalenone and its metabolite, α-zearalanol, are of significant concern due to their estrogenic and anabolic steroid activity. Several governments have regulatory standards and advisory guidelines for zearalenone and α-zearalanol. Raman and ultraviolet spectroscopy were employed with density functional theory methods to evaluate spectroscopic properties to distinguish between zearalenone and α-zearalanol systematically. Raman bands were assigned based on vibrational frequency calculations. A portable Raman spectroscopy instrument (785 nm laser) distinguished between zearalenone and α-zearalanol in a label-free manner. Many vibrational bands of zearalenone and α-zearalanol are similar, including high-intensity peaks at 1315 cm^-1 and 1650 cm^-1. However, the intensities in the Raman spectra at 1465 cm^-1, 1495 cm^-1, and 1620 cm^-1 enabled the identification of zearalenone. The Raman peak at 1450 cm^-1 is associated with α-zearalanol. These vibrational bands serve as spectral indicators to differentiate between the structurally similar zearalenone and α-zearalanol.

The characteristics of Raman spectroscopy of isomer CBD- and THC-Au nanoparticles using the density functional theory

The isomers cannabidiol (CBD) and Δ9-tetrahydrocannabinol (THC) can both be extracted from cannabis. We use density functional theory to study the Raman activity spectra, frontier molecular orbitals, and molecular electrostatic potentials of CBD, THC, and their respective gold complexes. A "selectivity enhancement" phenomenon for the spectral peaks at frequencies of 1144 cm^-1 and 1553 cm^-1 in the Raman spectrum of the CBD-Au_n complex, and at frequencies of 865 cm^-1, 1335 cm^-1, and 1553 cm^-1 in the Raman spectrum of the THC-Au_n complex, was observed and explained. The frontier molecular orbital energy gaps of CBD and THC are 5.4085 eV and 5.4461 eV, respectively, indicating that CBD is more likely to react than THC. The CBD/THC-Au complexes had the strongest chemical activities and greater charge transfer effects with an Au₃ cluster. The most electronegative sites of CBD and THC were found from molecular electrostatic potential (MEP) mapping. It is assumed that these sites are the adsorption sites of the CBD/THC molecules and gold surface. The MEP of the CBD/THC complexes also demonstrates the charge transfer effect between CBD/THC and Au. Both the "selectivity" phenomenon in the Raman activity spectra of the complex and the above assumption are explained by a surface selection rule. The conformation of the CBD/THC molecules on the gold surface are determined, showing that CBD is adsorbed vertically through the resorcinol structure while THC is adsorbed vertically through the tetrahydropyran and benzene ring.

An Open-Label, Randomized, 2-Way, Crossover Bioequivalence Study of Cefradine Capsules in Healthy Chinese Volunteers

The purpose of this study was to evaluate whether test cefradine capsules and reference cefradine capsules were bioequivalent in healthy Chinese volunteers. An open-label, randomized, biperiodic, crossover design was used. In each of the 2 study periods (separated by a 1-week washout period), 250-mg single doses of either the test or reference cefradine capsule were administered to study participants under fasted and fed conditions. Blood samples were collected at intervals from predose to 8 hours afterward. In the fasting study, the 90% confidence intervals (90%CI) of the C_max , AUC_0-8h , and AUC_0-∞ for the test and reference preparations were 93.7%-112.2%, 94.6%-100.8%, and 94.7%-100.9%, respectively. In the fed study, the 90%CI of the C_max , AUC_0-8h , and AUC_0-∞ for the test and reference preparations was 81.0%-99.1%, 100.5%-106.3%, and 100.5%-105.9%, respectively. The results showed that the test cefradine capsules and the reference formulation are bioequivalent under both fasting and fed conditions.