A novel bioaugmentation strategy to accelerate methanogenesis via adding Geobacter sulfurreducens PCA in anaerobic digestion system

Advances in microbial community, mechanisms and stimulation effects of direct interspecies electron transfer in anaerobic digestion

Anaerobic digestion (AD) has been proven to be an effective green technology for producing biomethane while reducing environmental pollution. The interspecies electron transfer (IET) processes in AD are critical for acetogenesis and methanogenesis, and these IET processes are carried out via mediated interspecies electron transfer (MIET) and direct interspecies electron transfer (DIET). The latter has recently become a topic of significant interest, considering its potential to allow diffusion-free electron transfer during the AD process steps. To date, different multi-heme c-type cytochromes, electrically conductive pili (e-pili), and other relevant accessories during DIET between microorganisms of different natures have been reported. Additionally, several studies have been carried out on metagenomics and metatranscriptomics for better detection of DIET, the role of DIET's stimulation in alleviating stressed conditions, such as high organic loading rates (OLR) and low pH, and the stimulation mechanisms of DIET in mixed cultures and co-cultures by various conductive materials. Keeping in view this significant research progress, this study provides in-depth insights into the DIET-active microbial community, DIET mechanisms of different species, utilization of various approaches for stimulating DIET, characterization approaches for effectively detecting DIET, and potential future research directions. This study can help accelerate the field's research progress, enable a better understanding of DIET in complex microbial communities, and allow its utilization to alleviate various inhibitions in complex AD processes.

Electrical stress and acid orange 7 synergistically clear the blockage of electron flow in the methanogenesis of low-strength wastewater

Energy recovery from low-strength wastewater through anaerobic methanogenesis is constrained by limited substrate availability. The development of efficient methanogenic communities is critical but challenging. Here we develop a strategy to acclimate methanogenic communities using conductive carrier (CC), electrical stress (ES), and Acid Orange 7 (AO7) in a modified biofilter. The synergistic integration of CC, ES, and AO7 precipitated a remarkable 72-fold surge in methane production rate compared to the baseline. This increase was attributed to an altered methanogenic community function, independent of the continuous presence of AO7 and ES. AO7 acted as an external electron acceptor, accelerating acetogenesis from fermentation intermediates, restructuring the bacterial community, and enriching electroactive bacteria (EAB). Meanwhile, CC and ES orchestrated the assembly of the archaeal community and promoted electrotrophic methanogens, enhancing acetotrophic methanogenesis electron flow via a mechanism distinct from direct electrochemical interactions. The collective application of CC, ES, and AO7 effectively mitigated electron flow impediments in low-strength wastewater methanogenesis, achieving an additional 34% electron recovery from the substrate. This study proposes a new method of amending anaerobic digestion systems with conductive materials to advance wastewater treatment, sustainability, and energy self-sufficiency.

Mechanistic insights into synergistic facilitation of copper/zinc ions and dewatered swine manure-derived biochar on anaerobic digestion of swine wastewater

Biochar-assisted anaerobic digestion (AD) has been proposed an advanced system for swine wastewater (SW) management. However, the effects of metallic nutrients in SW, such as copper/zinc ions (Cu2+/Zn2+), on the biochar-assisted AD of SW are not well understood. This study investigated the influences of individual Cu2+/Zn2+ or dewatered swine manure-derived biochar, as well as their combined additions, on the AD of SW. The results showed that exposure to 50 mg/L Cu2+/Zn2+ temporary inhibited methane production, but the addition of 20 g/L biochar alleviated this inhibition by shortening the methanogenic lag time and increasing methane yield. Following a period of acclimation, both Cu2+/Zn2+ and biochar promoted methane production, although metagenomic analysis revealed distinct mechanisms underlying their promotion. Cu2+/Zn2+ enhanced ATP processing, including electron exchange between NADH/NAD+ and succinate/fumarate transformation, by 26.0-35.8%. Additionally, the gene encoding Coenzyme M methylation was upregulated by 36.2% along with enrichments of Methanocullus and Methanosarcina, contributing to accelerated hydrolysis and methanogenesis rates by 54.7% and 44.8%, respectively. On the other hand, biochar mainly stimulated bacterial F-type ATPase activities by 28.4%, likely facilitating direct interspecies electron transfer between Geobacter and Methanosarcina for syntrophic methanogenesis. The combined addition of Cu2+/Zn2+ and biochar resulted in "win-win" benefits, significantly increasing the maximum methane production rate from 40.3 mL CH4/d to 53.7 mL CH4/d. Moreover, the introduction of biochar into AD of SW facilitated the transformation of more Cu2+/Zn2+ from a reducible Fe-Mn oxides form to a residual form, which potentially reduced the metallic toxicity of the digestate for soil amendment. The findings of this study provide novel insights into understanding the synergistic impacts of heavy metals and biochar in regulating SW during AD, as well as the management of associated digestate.

Insights into the roles and mechanisms of a green-prepared magnetic biochar in anaerobic digestion of waste activated sludge

Methane is one of the most promising renewable energies to alleviate energy crisis or replace fossil fuels, which can be recovered from anaerobic digestion of bio-wastes. However, the engineering application of anaerobic digestion is always hindered by low methane yield and production rate. This study revealed the roles and mechanisms of a green-prepared magnetic biochar (MBC) in promoting methane production performance from waste activated sludge. Results showed that the methane yield reached 208.7 mL/g volatile suspended solids with MBC additive dosage of 1 g/L, increasing by 22.1 % compared to that in control. Mechanism analysis demonstrated that MBC could promote hydrolysis, acidification, and methanogenesis stages. This was because the properties of biochar were upgraded by loading nano-magnetite, such as specific surface area, surface active sites, and surface functional groups, which made MBC have greater potential to mediate electron transfer. Correspondingly, the activity of α-glucosidase and protease respectively increased by 41.7 % and 50.0 %, and then the hydrolysis performances of polysaccharides and proteins were improved. Also, MBC improved the secretion of electroactive substances like humic substances and cytochrome C, which could promote extracellular electron transfer. Furthermore, Clostridium and Methanosarcina, as well-known electroactive microbes, were selectively enriched. The direct interspecies electron transfer between them was established via MBC. This study provided some scientific evidences to comprehensively understand the roles of MBC in anaerobic digestion, with important implications for achieving resource recovery and sludge stabilization.

Bioaugmentation with marine sediment-derived microbial consortia in mesophilic anaerobic digestion for enhancing methane production under ammonium or salinity stress

Ammonium (NH₄⁺) and salinity (NaCl) inhibit CH₄ production in anaerobic digestion. However, whether bioaugmentation using marine sediment-derived microbial consortia can relieve the inhibitory effects of NH₄⁺ and NaCl stresses on CH₄ production remains unclear. Thus, this study evaluated the effectiveness of bioaugmentation using marine sediment-derived microbial consortia in alleviating the inhibition of CH₄ production under NH₄⁺ or NaCl stress and elucidated the underlying mechanisms. Batch anaerobic digestion experiments under 5 gNH₄-N/L or 30 g/L NaCl were performed with or without augmentation using two marine sediment-derived microbial consortia pre-acclimated to high NH₄⁺ and NaCl. Compared with non-bioaugmentation, bioaugmentation reinforced CH₄ production. Network analysis revealed the joint effects of microbial connections by Methanoculleus, which promoted the efficient consumption of propionate accumulated under NH₄⁺ and NaCl stresses. In conclusion, bioaugmentation with pre-acclimated marine sediment-derived microbial consortia can mitigate the inhibition under NH₄⁺ or NaCl stress and enhance CH₄ production in anaerobic digestion.

Use of additives to improve collective biogas plant performances: A comprehensive review

Nowadays, anaerobic digestion (AD) is being increasingly encouraged to increase the production of biogas and thus of biomethane. Due to the high diversity among feedstocks used, the variability of operating parameters and the size of collective biogas plants, different incidents and limitations may occur (e.g., inhibitions, foaming, complex rheology). To improve performance and overcome these limitations, several additives can be used. This literature review aims to summarize the effects of the addition of various additives in co-digestion continuous or semi-continuous reactors to fit as much as possible with collective biogas plant challenges. The addition of (i) microbial strains or consortia, (ii) enzymes and (iii) inorganic additives (trace elements, carbon-based materials) in digester is analyzed and discussed. Several challenges associated with the use of additives for AD process at collective biogas plant scale requiring further research work are highlighted: elucidation of mechanisms, dosage and combination of additives, environmental assessment, economic feasibility, etc.

Methanosarcina thermophila bioaugmentation and its synergy with biochar growth support particles versus polypropylene microplastics in thermophilic food waste anaerobic digestion

Both biochar supplementation as well as bioaugmentation have been shown in literature to improve the methane yield of anaerobic digestion. In this study, the combination of both are evaluated by growing Methanosarcina thermophila on biochar support particles prior to augmentation of thermophilic food waste anaerobic digestion. Biochar stand alone, bioaugmentation solely, a combination of both added separately or grown together, and utilizing polypropylene (PP) microplastics as growth support instead were all tested when starting up a thermophilic process from mesophilic inoculum. Methanosarcina thermophila and biochar supplementation displayed synergy, with 5% M. thermophila on 1 g/L biochar presenting a 32% increase in specific methane yield over the control. Double the bioaugmentation dosage/concentration was also trialled with a thermophilic inoculum, and 10% M. thermophila grown on 2 g/L biochar displayed the best results with a 20% increase specific methane yield from its control standard.

Enhanced anaerobic digestion of dairy wastewater in a granular activated carbon amended sequential batch reactor

This study investigated the potential of granular activated carbon (GAC) supplementation to enhance anaerobic degradation of dairy wastewater. Two sequential batch reactors (SBRs; 0.8 L working volume), one control and another amended with GAC, were operated at 37°C and 1.5-1.6 m/h upflow velocity for a total of 120 days (four cycles of 30 days each). The methane production at the end of each cycle run increased by about 68%, 503%, 110%, and 125% in the GAC-amended SBR, compared with the Control SBR. Lipid degradation was faster in the presence of GAC. Conversely, the organic compounds, especially lipids, accumulated in the absence of the conductive material. In addition, a reduction in lag phase duration by 46%-100% was observed at all four cycles in the GAC-amended SBR. The peak methane yield rate was at least 2 folds higher with GAC addition in all cycles. RNA-based bacterial analysis revealed enrichment of Synergistes (0.8% to 29.2%) and Geobacter (0.4% to 11.3%) in the GAC-amended SBR. Methanolinea (85.8%) was the dominant archaea in the biofilm grown on GAC, followed by Methanosaeta (11.3%), at RNA level. Overall, this study revealed that GAC supplementation in anaerobic digesters treating dairy wastewater can promote stable and efficient methane production, accelerate lipid degradation and might promote the activity of electroactive microorganisms.

Electron transfer from Geobacter sulfurreducens to mixed methanogens improved methane production with feedstock gases of H2 and CO2

In order to solve problems of poor utilization of H₂ and CO₂ in biomethane conversion with mixed methanogens due to multi-channel competition and nondirectional electron transfer, Geobacter sulfurreducens were cocultured with mixed methanogens to promote oriented metabolic pathway of H₂ and CO₂ to produce CH₄. When inoculation volume ratio of G. sulfurreducens to mixed methanogens was 2:4, CH₄ yield increased to 0.24 mL/ml H₂ (close to the maximum theoretical yield of 0.25 mL/ml H₂) and conversion efficiency of H₂ to CH₄ increased from 72 to 96%. Electrochemical detection and three-dimensional fluorescence spectra showed that the co-culture system had an increased metabolic capacity and spectral intensity of fulvic acid-like compounds was enhanced, which mediated direct interspecific electron transfer to produce CH₄. The 16S rRNA gene sequencing showed that relative abundance of G. sulfurreducens and Methanoculleus increased, indicating an established syntrophic relationship between G. sulfurreducens and Methanoculleus.

Enhanced electricity generation and tetracycline removal of bioelectro-Fenton with electroactive biofilm induced by multi external resistance

A simple multi electric resistance mode is used to regulate electroactive anode film, which improves the electricity generation, H₂O₂ production and pollutants removal. This external electron transport path (double cathode with different resistance) exhibits higher H₂O₂ production (571.9 ± 0.1 mg m^-2 h^-1), tetracycline removal (71.4 ± 0.4% to 50 mg L^-1), and power (615.3 ± 9.9 mW m^-2 plus 680.6 ± 10.3 mW m^-2), which is 75.4%, 23.1% and 1.25 times higher than that of single cathode mode. The double cathode improves the relative abundance of Geobacter (exoelectrogens), which is 9.45 times higher than that of single cathode mode. The anodic capacitance of double cathode mode is more than 10 times higher than that of single cathode mode. Electrons (generate by exoelectrogens) participate in two- (cathodic chamber) and four- (anodic chamber) electron reaction at cathode surface, and facilitates electricity generation of bioelectro-Fenton. The removal rate of double cathode mode is 342.7 mg L^-1 d^-1 (50 mg L^-1 tetracycline) and 170.1 mg L^-1 d^-1 (20 mg L^-1 tetracycline), which is much higher than that of reported. These results indicate that external electron transport path enhances the electrochemical activity of anode film and performance of bioelectro-Fenton. This paper provides a new power supply method for the future practical application and field experiment of bioelectrio-Fenton.

Metagenomics and metatranscriptomics uncover the microbial community associated with high S0 production in a denitrifying desulfurization granular sludge reactor

The denitrification desulfurization process is a promising technology for elemental sulfur (S⁰) production from sulfide containing wastewater. However, the microbial community associated with high S⁰ production still is not well studied. This study describes an efficient denitrification S⁰ production bioreactor based on inoculation with anaerobic granular sludge. At an optimal S/N molar ratio of 7:2, 80 % of the influent sulfide was transformed to high quality elemental sulfur with a purity of 92.5% while the total inorganic nitrogen removal efficiency was stable at ∼80%. Metatranscriptomic analysis found that community expression of the gene encoding the sulfide-quinone reductase (SQR) was 10-fold greater than that of the flavocytochrome-c sulfide dehydrogenase subunit B (fccB). Moreover, the expression level of SQR was also significantly higher than the Dsr gene encoding for dissimilatory sulfate reductase, which encodes a critical S⁰ oxidation enzyme. Metagenomic binning analysis confirmed that sulfide-oxidizing bacteria (SOB) utilizing SQR were common in the community and most likely accounted for high S⁰ production. An unexpected enrichment in methanogens and high expression activity of bacteria carrying out Stickland fermentation as well as in other bacteria with reduced genomes indicated a complex community supporting stable sulfide oxidation to S⁰, likely aiding in performance stability. This study establishes this treatment approach as an alternative biotechnology for sulfide containing wastewater treatment and sheds light on the microbial interactions associated with high S⁰ production.

Phase Separation in Anaerobic Digestion: A Potential for Easier Process Combination?

The flexibilization of bioenergy production has the potential to counteract partly other fluctuating renewable energy sources (such as wind and solar power). As a weather-independent energy source, anaerobic digestion (AD) can offer on-demand energy supply through biogas production. Separation of the stages in anaerobic digestion represents a promising strategy for the flexibilization of the fermentative part of biogas production. Segregation in two reactor systems facilitates monitoring and control of the provision of educts to the second methanogenic stage, thus controlling biogas production. Two-stage operation has proven to reach similar or even higher methane yields and biogas purities than single-stage operation in many different fields of application. It furthermore allows methanation of green hydrogen and an easier combination of material and energy use of many biogenic raw and residual biomass sources. A lot of research has been conducted in recent years regarding the process phase separation in multi-stage AD operation, which includes more than two stages. Reliable monitoring tools, coupled with effluent recirculation, bioaugmentation and simulation have the potential to overcome the current drawbacks of a sophisticated and unstable operation. This review aims to summarize recent developments, new perspectives for coupling processes for energy and material use and a system integration of AD for power-to-gas applications. Thereby, cell physiological and engineering aspects as well as the basic economic feasibility are discussed. As conclusion, monitoring and control concepts as well as suitable separation technologies and finally the data basis for techno-economic and ecologic assessments have to be improved.

Enhancing anaerobic digestion process with addition of conductive materials

Anaerobic digestion is widely used for the treatment of wastewater for its low costs and bioenergy production, but the performances of anaerobic digestion often need improving in practical applications. The addition of conductive materials could lead to direct interspecies electron transfer (DIET) among the anaerobic microorganisms, and consequently enhance the efficiencies of anaerobic digestion. In this paper, the effects of DIET via conductive materials on chemical organic demand (COD) removal, volatile fatty acid (VFA) consumption and methane production were reviewed. The reports on the increase of conductive microorganisms due to the addition of conductive materials were discussed. Results regarding activities of microorganisms and morphology and properties of sludge were described and commented, and future research needs were also proposed which included better understanding of the roles of DIET in each step of anaerobic digestion, mechanisms of metabolism of pollutants in DIET-established systems and inhibition of excessive dosage of conductive materials.

The exacerbation of mercury methylation by Geobacter sulfurreducens PCA in a freshwater algae-bacteria symbiotic system throughout the lifetime of algae

Mine-polluted wastewater with mercury (Hg) poses severe environmental pollution since Hg(II) can be converted to highly neurotoxic methylmercury (MeHg) under anaerobic conditions. Previous studies on Hg methylation have focused on aquatic sediments, but few have investigated the MeHg formation in water layers containing algae. In this study, we investigated the dynamic effect of algae on Hg methylation throughout the lifetime of algae. We found that Chlorella pyrenoidosa was a non-methylating alga and exhibited good tolerance to Hg stress (1-20 μg/L); thus Hg(II) could not inhibit the process of eutrophication. However, the presence of C. pyrenoidosa significantly enhanced the Hg methylation by Geobacter sulfurreducens PCA. Compared to the control sample without algae, the MeHg production rate of algae-bacteria samples remarkably exacerbated by 62.3-188.3% with the algal growth period at cell densities of 1.5 × 10⁶-25 × 10⁶ cells/mL. The increase of algal organic matter and thiols with the algal growth period resulted in the exacerbation of MeHg production. The Hg methylation was also enhanced with the presence of dead algae, of which the enhancement was ~62.4% lower than that with the presence of live algae. Accordingly, the potential mechanism of Hg methylation in a freshwater algae-bacteria symbiotic system throughout the algal lifetime was proposed.

Developing microbial communities containing a high abundance of exoelectrogenic microorganisms using activated carbon granules

Microorganisms that can transfer electrons outside their cells are useful in a range of wastewater treatment and remediation technologies. Conventional methods of enriching exoelectrogens are cost-prohibitive (e.g., controlled-potential electrodes) or lack specificity (e.g., soluble electron acceptors). In this study a low-cost and simple approach to enrich exoelectrogens from a mixed microbial inoculum was investigated. After the method was validated using the exoelectrogen Geobacter sulfurreducens, microorganisms from a pilot-scale biological activated carbon (BAC) filter were subjected to incubations in which acetate was provided as the electron donor and granular activated carbon (GAC) as the electron acceptor. The BAC-derived community oxidized acetate and reduced GAC at a capacity of 1.0 mmol e^- (g GAC)^-1. After three transfers to new bottles, acetate oxidation rates increased 4.3-fold, and microbial morphologies and GAC surface coverage became homogenous. Although present at <0.01% in the inoculum, Geobacter species were significantly enriched in the incubations (up to 96% abundance), suggesting they were responsible for reducing the GAC. The ability to quickly and effectively develop an exoelectrogenic microbial community using GAC may help initiate and/or maintain environmental systems that benefit from the unique metabolic capabilities of these microorganisms.

Enhancement of nitrite-dependent anaerobic methane oxidation via Geobacter sulfurreducens

Nitrite-dependent anaerobic methane-oxidation (n-damo) is a potential novel technology for nitrogen removal in anaerobic wastewater treatment. In this study, Geobacter sulfurreducens (G) was applied to stimulate n-damo activity. Conductive materials such as nano-magnetite (M) or aggregating agents such as hydroxylapatite (H) were co-added with G. sulfurreducens to further investigate the enhancement effect. Results showed that the nitrite reduction activity of the n-damo culture was promoted by G. sulfurreducens, with 1.71-2.38 times higher in treatment G, G + M, and G + H than that in the control, but was inhibited by the single addition of hydroxylapatite. N-damo bacterial abundances based on the qPCR of the n-damo-specific pmoA gene increased in treatments with G. sulfurreducens, compared with that of the control. High-throughput sequencing analysis revealed the enrichment of uncultured phylum WPS-2 in treatments with G. sulfurreducens. Fluorescence in situ hybridization verified the co-occurrence pattern of n-damo bacteria (NC10), G. sulfurreducens, and type-I aerobic methanotrophs (Methylomonas spp.). The above results corroborated the microbial interspecies electron transfer (MIET) potentiality of the n-damo enrichment. Our study provides a novel pathway for enhancing MIET to stimulate n-damo process.

Effects of alkali, autoclaving, and Fe+ autoclaving pretreatment on anaerobic digestion performance of coking sludge from the perspective of sludge extracts and methane production

Pretreatment of activated sludge is an important step in increasing the reaction speed during anaerobic digestion by accelerating the hydrolysis process. It is necessary not only to analyze the changes in the general properties of the sludge before and after pretreatment but also to further analyze and evaluate the sludge structure and extracellular polymeric substances (EPS). In this study, the changes in coking sludge extracts after pretreatments with alkali, autoclaving, and Fe+ autoclaving were analyzed and compared using EPS heat extraction method. Moreover, the methane production potential of the pretreated coking sludge was investigated via biochemical methane potential (BMP) test. The results showed that after alkali, autoclaving, and Fe+ autoclaving, the concentration of protein and polysaccharide in the bound sludge extract accounted for approximately 40% and 28%, 62% and 51%, and 66% and 83% of the total protein and polysaccharide extracted from the sludge, respectively. In the experiment without pretreatment, there is no phenomenon of gas production from coking sludge. According to the BMP test results, Fe+ autoclaving pretreatment showed the highest methane production of 257 mL/gVSS. This study revealed that the analysis of sludge extracts was necessary in assessing the effects of anaerobic digestion pretreatment and methanogenic potential. Moreover, coking sludge showed higher methanogenic potential after Fe+ autoclaving pretreatment.

Soil Bacterial Community Structure in Turfy Swamp and Its Response to Highway Disturbance

In recent years, the construction and development of highways in turfy swamp areas has been very common. When highways pass through turfy swamps, they can change the local soil, vegetation and hydrological environment, but the impact on soil microorganisms is unclear. We studied the impact of highways on soil microbial communities and diversity in three turfy swamps. Soil samples were collected in the affected area (distance from the expressway 10 m) and control area (distance from the expressway 500–1000 m), and the soil properties, heavy metal content and microbial composition were measured. Subsequent statistical analysis showed that soil organic carbon (SOC), total nitrogen (TN), Cd, Cr, Zn, Cu, density and especially water table (WT) are the main driving forces affecting the composition of microorganisms. The WT and density can also be used to predict the change trend of the ratio of proteobacteria to acid bacteria, reflecting the soil nutrient status. In general, the composition of soil microorganisms in turfy swamp is mainly affected by road drainage and heavy metal emissions. This research provides new insights into the impact of highways on turfy swamps from the perspective of bacterial diversity and community composition, and it also provides a basis for the restoration of the wetland ecological environment.

Fat, oil, and grease (FOG) deposits yield higher methane than FOG in anaerobic co-digestion with waste activated sludge

The formation of fat, oil, and grease (FOG) deposits in sewers is a global challenge for the maintenance of sewer collection systems. Tons of FOG deposits (FDs) are removed from sewer systems every year and present an opportunity for increased methane production via anaerobic co-digestion with waste activated sludge (WAS) at water resource recovery facilities with existing anaerobic digesters. We hypothesized that FDs have higher biomethane potential than that of FOG (e.g., FOG collected in grease interceptors), because of the reduction of inhibition of long chain fatty acids due to saponification. In this study, substantially enhanced methane production was found in anaerobic co-digestion of WAS with FDs within the substrate to inoculum (S/I) ratio range of 0.25-1.2, and the maximum ultimate methane production (685.7 ± 24.1 mL/gVS_added, at S/I = 0.5) was 4.0 times higher than in the control (with WAS only) after 42 days of incubation. Although the lag phase period was longer in FD co-digestion (S/I = 0.5) than in FOG co-digestion (S/I = 0.5) under the same organic loading (gVS) and two times the COD loading, the daily methane production rate became higher after Day 15 in FD co-digestion. Significantly higher cumulative methane production (10.2%, p < 0.05) was obtained in FD co-digestion than in FOG co-digestion after 42-days. Microbial community analysis revealed higher levels of Geobacter in FD co-digestion, possibly suggesting a role for direct interspecies electron transfer (DIET) between Methanosaeta and Geobacter. This work provides fundamental insights supporting anaerobic co-digestion of FDs with WAS, demonstrating the advantages of FDs compared to FOG as co-substrate for enhanced biomethane recovery.

Effects of hydropower dam construction on sulfur distribution and sulfate-reducing prokaryotes assemblage

River damming is significant for hydropower production, but also alters the ecological conditions, and especially affects the microbial community. Sulfate-reducing prokaryotes (SRPs) make vital contributions to biogeochemical sulfur cycle, but the information on the effects of dam construction on the SRPs assemblage are unclear. Here, a comprehensive survey was conducted by collecting water and sediment samples along horizontal and vertical profiles from six sites at the Xiaowan Reservoir on the Lancang River, China. We used 16S rRNA gene amplicon sequencing and qPCR assay with dsrB gene to study the composition and activity of SRPs. The results indicated that river damming accumulated nutrients in the middle layer of the reservoir, and the impoundment provided an anaerobic and high nutrient available environment, which is beneficial for the survival of SRPs. The abundance and diversity of SRPs in water and sediments at the bottom of the reservoir were higher than those in the other sites. The network analyses revealed a synergistic effect between SRPs and other dominant bacteria in water column, which was more complex than in sediments. Moreover, a relatively higher sulfate reduction activity was found in the middle and lower layers of the water profile according to dsrB gene analysis.

Evidence for the coexistence of direct and riboflavin-mediated interspecies electron transfer in Geobacter co-culture

Geobacter species can secrete free redox-active flavins, but the role of these flavins in the interspecies electron transfer (IET) of Geobacter direct interspecies electron transfer (DIET) co-culture is unknown. Here, we report the presence of a new riboflavin-mediated interspecies electron transfer (RMIET) process in a traditional Geobacter DIET co-culture; in this process, riboflavin contributes to IET by acting as a free-form electron shuttle between free Geobacter species and serving as a bound cofactor of some cytochromes in Geobacter co-culture aggregates. Multiple lines of evidence indicate that RMIET facilitates the primary initiation of syntrophic growth between Geobacter species before establishing the DIET co-culture and provides additional ways alongside the DIET to transfer electrons to achieve electric syntrophy between Geobacter species. Redox kinetic analysis of riboflavin on either Geobacter species demonstrated that the Gmet_2896 cytochrome acts as the key riboflavin reduction site, while riboflavin oxidation by Geobacter sulfurreducens is the rate-limiting step in RMIET, and the RMIET makes only a minor contribution to IET in Geobacter DIET co-culture. The discovery of a new RMIET process in Geobacter DIET co-culture suggests the complexity of IET in syntrophic bacterial communities and provides suggestions for the careful examination of the IET of other syntrophic co-cultures.