Eutrophication influences methanotrophic activity, abundance and community structure in freshwater lakes

Response of microbial communities to exogenous nitrate nitrogen input in black and odorous sediment

Since nitrate nitrogen (NO3--N) input has proved an effective approach for the treatment of black and odorous river waterbody, it was controversial whether the total nitrogen concentration standard should be raised when the effluent from the sewage treatment plant is discharged into the polluted river. To reveal the effect of exogenous nitrate (NO3--N) on black odorous waterbody, sediments with different features from contaminated rivers were collected, and the changes of physical and chemical characteristics and microbial community structure in sediments before and after the addition of exogenous NO3--N were investigated. The results showed that after the input of NO3--N, reducing substances such as acid volatile sulfide (AVS) in the sediment decreased by 80 % on average, ferrous (Fe2+) decreased by 50 %, yet the changing trend of ammonia nitrogen (NH4+-N) in some sediment samples increased while others decreased. High-throughput sequencing results showed that the abundance of Thiobacillus at most sites increased significantly, becoming the dominant genus in the sediment, and the abundance of functional genes in the metabolome increased, such as soxA, soxX, soxY, soxZ. Network analysis showed that sediment microorganisms evolved from a single sulfur oxidation ecological function to diverse ecological functions, such as nitrogen cycle nirB, nirD, nirK, nosZ, and aerobic decomposition. In summary, inputting an appropriate amount of exogenous NO3--N is beneficial for restoring and maintaining the oxidation states of river sediment ecosystems.

CO2 and CH4 dynamics in a eutrophic tropical Andean reservoir

We studied the dynamics of methane (CH4) and carbon dioxide (CO2) in a eutrophic tropical reservoir located in the Colombian Andes. Temporal and spatial dynamics were addressed through sampling during six field campaigns conducted throughout a two-year period. We monitored fluxes at the air-water interface, dissolved gas concentrations, physical and chemical properties of the water column, microstructure profiles of turbulence, and meteorological conditions. Throughout the study period, the reservoir was a persistent source of CH4 to the atmosphere with higher emissions occurring in the near inflow region. During periods of low water levels, both the emissions and surface concentrations of CH4 were higher and more spatially heterogeneous. The measured CO2 fluxes at the air-water interface changed direction depending on the time and location, showing alternating uptake and emissions by the water surface. Mass balances of dissolved CH4 in the surface mixed layer revealed that biochemical reactions and gas evasion were the most significant processes influencing the dynamics of dissolved CH4, and provided new evidence of possible oxic methane production. Our results also suggest that surface CH4 concentrations are higher under more eutrophic conditions, which varied both spatially and temporally.

Management of biofilm by an innovative layer-structured membrane for membrane biofilm reactor (MBfR) to efficient methane oxidation coupled to denitrification (AME-D)

Aerobic methane oxidation coupled with denitrification (AME-D) has garnered significant attention as a promising technology for nitrogen removal from water. Effective biofilm management on the membrane surface is essential to enhance the efficiency of nitrate removal in AME-D systems. In this study, we introduce a novel and scalable layer-structured membrane (LSM) developed using a meticulously designed polyurethane sponge. The application of the LSM in advanced biofilm management for AME-D resulted in a substantial enhancement of denitrification performance. Our experimental results demonstrated remarkable improvements in nitrate-removal flux (92.8 mmol-N m-2 d-1) and methane-oxidation rate (325.6 mmol m-2 d-1) when using an LSM in a membrane biofilm reactor (L-MBfR) compared with a conventional membrane reactor (C-MBfR). The l-MBfR exhibited 12.4-, 6.8- and 3.4-fold increases in nitrate-removal rate, biomass-retention capacity, and methane-oxidation rate, respectively, relative to the control C-MBfR. Notably, the l-MBfR demonstrated a 3.5-fold higher abundance of denitrifying bacteria, including Xanthomonadaceae, Rhodocyclaceae, and Methylophilaceae. In addition, the denitrification-related enzyme activity was twice as high in the l-MBfR than in the C-MBfR. These findings underscore the LSM's ability to create anoxic/anaerobic microenvironments conducive to biofilm formation and denitrification. Furthermore, the LSM exhibited a unique advantage in shaping microbial community structures and facilitating cross-feeding interactions between denitrifying bacteria and aerobic methanotrophs. The results of this study hold great promise for advancing the application of MBfRs in achieving efficient and reliable nitrate removal through the AME-D pathway, facilitated by effective biofilm management.

The ratio but not individual of fragile to refractory DOM affects greenhouse gases release in different trophic level lakes

Inland shallow lakes are recognized as an important source of greenhouse gases (GHGs), and their contribution is expected to increase due to global eutrophication. The generation and release of GHGs involved multiple variables, leading to many uncertain potential factors. This study examined the emission characteristics of GHGs at the water-air interface in 12 shallow lakes categorized into four eutrophic levels in the Yangtze River basin. The average emission rates of CH4, CO2 and N2O were 1.55, 3.43, 18.13 and 30.47 mg m-2 h-1, 4.12, 14.64, 25.11 and 69.84 mg m-2 h-1, and 0.2, 0.25, 0.43 and 0.79 mg m-2 day-1 in the oligotrophic, mesotrophic, eutrophic and hypereutrophic lakes, respectively. There were significant correlations between eutrophic levels and the emission rates of CH4 and CO2 (p < 0.05). Redundancy analysis and Mantel test were conducted to further examine the key factors influencing carbon emissions from eutrophic water. It was found that the presence of algae and nutrients in the overlying water played a crucial role in the release of GHGs, indicating the importance of ecosystem productivity in the carbon budget of the lake. In order to assess the bioavailability of organic matter, a new indicator called R(P/H) was proposed. This indicator represents the ratio of protein and humus-like components, which were obtained through EEMs-PARAFAC modeling. The relationship between R(P/H) and CH4 was found to be exponential (R2 = 0.90). Additionally, R(P/H) showed a linear relationship with CO2 and N2O (R2 = 0.68, R2 = 0.75). Therefore, it is crucial to consider R(P/H) as an important factor in accurately estimating global GHG emission fluxes in the future, especially with advancements in the database.

Methane Oxidation Coupled to Selenate Reduction in a Membrane Bioreactor under Oxygen-Limiting Conditions

Microbial methane oxidation coupled to a selenate reduction process has been proposed as a promising solution to treat contaminated water, yet the underlying microbial mechanisms are still unclear. In this study, a novel methane-based membrane bioreactor system integrating hollow fiber membranes for efficient gas delivery and ultrafiltration membranes for biomass retention was established to successfully enrich abundant suspended cultures able to perform methane-dependent selenate reduction under oxygen-limiting conditions. The microbial metabolic mechanisms were then systematically investigated through a combination of short-term batch tests, DNA-based stable isotope probing (SIP) microcosm incubation, and high-throughput sequencing analyses of 16S rRNA gene and functional genes (pmoA and narG). We confirmed that the methane-supported selenate reduction process was accomplished by a microbial consortia consisting of type-II aerobic methanotrophs and several heterotrophic selenate reducers. The mass balance and validation tests on possible intermediates suggested that methane was partially oxidized into acetate under oxygen-limiting conditions, which was consumed as a carbon source for selenate-reducing bacteria. High-throughput 16S rRNA gene sequencing, DNA-SIP incubation with 13CH4, and subsequent functional gene (pmoA and narG) sequencing results collectively proved that Methylocystis actively executed partial methane oxidation and Acidovorax and Denitratisoma were dominant selenate-reducing bacteria, thus forming a syntrophic partnership to drive selenate reduction. The findings not only advance our understanding of methane oxidation coupled to selenate reduction under oxygen-limiting conditions but also offer useful information on developing methane-based biotechnology for bioremediation of selenate-contaminated water.

Potential Linkage between Heavy Metal Pollution Risk Assessment and Dissolved Organic Matter Spectra in the WWTPs-River Integrated Area-Case Study from Ashi River

Direct sewage discharge can cause severe damage to the water environment of the river. However, the impacts of dissolved organic matter (DOM) in the discharge on the original pattern of DOM and the distribution of heavy metals (HMs) in the river are little known. How to monitor such areas in a long-term and systematic manner also needs to be urgently addressed. In this paper, we characterized the DOM of the sediments in the WWTPs (wastewater treatment plants)-river integrated zone by ultraviolet-visible absorption spectroscopy (UV-vis), three-dimensional excitation-emission matrix (3D-EEM) combined with parallel factor (PARAFAC) method. The effects of WWTP on receiving waters were investigated, and the potential link between DOM and HM pollution was explored. Hg (Igeo: 3.94 ± 0.65; EF: 44.83 ± 31.11), Cd (Igeo: 1.81 ± 0.69; EF: 8.02 ± 2.97), Cu (Igeo: 1.61 ± 0.83; EF: 6.85 ± 2.37), Zn (Igeo: 1.55 ± 0.54; EF: 7.24 ± 3.58), and Ni (Igeo: 1.46 ± 0.56; EF: 6.12 ± 1.99) in rivers were the primary risk sources of HM. The combined pollution risk indicates that the WWTPs-river integrated area is in a high pollution risk state. Moreover, α(254) has a significant correlation with pollution indicators and can be used as a proxy indicator. These results help to understand better the impact of WWTPs on receiving water bodies and the potential connection between DOM and HM pollution and provide new ideas for monitoring the water environment in highly polluted areas.

Potential linkage between WWTPs-river-integrated area pollution risk assessment and dissolved organic matter spectral index

The direct discharge of wastewater can cause severe damage to the water environment of the surface water. However, the influence of dissolved organic matter (DOM) present in wastewater on the allocation of DOM, nitrogen (N), and phosphorus (P) in rivers remains largely unexplored. Addressing the urgent need to monitor areas affected by direct wastewater discharge in a long-term and systematic manner is crucial. In this paper, the DOM of overlying water and sediment in the WWTPs-river-integrated area was characterized by ultraviolet-visible absorption spectroscopy (UV-vis), three-dimensional excitation-emission matrix combined with parallel factor (PARAFAC) method. The effects of WWTPs on receiving waters were investigated, and the potential link between DOM and N, P pollution was explored. The pollution risk was fitted and predicted using a spectral index. The results indicate that the improved water quality index (IWQI) is more suitable for the WWTPs-river integration zone. The DOM fraction in this region is dominated by humic-like matter, which is mainly influenced by WWTPs drainage as well as microbial activities. The DOM fractions in sediment and overlying water were extremely similar, but fluorescence intensity possessed more significant spatial differences. The increase in humic-like matter facilitates the production and preservation of P and also inhibits nitrification, thus affecting the N cycle. There is a significant correlation between DOM fraction, fluorescence index, and N, P. Fluorescence index (FI) fitting of overlying water DOM predicted IWQI and trophic level index, and a(254) fitting of sediment DOM predicted nitrogen and phosphorus pollution risk (FF) with good results. These results contribute to a better understanding of the impact of WWTPs on receiving waters and the potential link between DOM and N and P pollution and provide new ideas for monitoring the water environment in highly polluted areas.

Community structure and network interaction of aerobic methane-oxidizing bacteria in Chongqing's central urban area in the Three Gorges Reservoir, China

A reservoir is an important source of methane (CH₄), which is consumed by aerobic methane-oxidizing bacteria (MOB), representing the main CH₄ sink in water. The central urban area of Chongqing in the Three Gorges Reservoir (TGR) area was selected as the study area in 2021. High-throughput sequencing was used to analyze the community structure and abundance of MOBs. The results showed that Methylocystis (Type II) was the dominant MOB in water, whereas Methylococcus (Type I) and Methylocystis co-dominated the sediments. High water temperature in the study area largely accounted for the predominance of Type II MOBs in the two habitats. Moreover, the influence of environmental factors on MOB community and its interspecific relationship were significantly regulated by the operation of the TGR. In the low-water-level period, NO₂^--N and CO₂ concentration significantly correlated with Methylocystis, whereas in the high-water-level period, the higher discharge and velocity weakened the influence of all environmental factors on Methylocystis. In addition, the scouring of sediments by increasing discharge in the high-water-level period caused a significant decrease in dissolved CH₄ concentration. The decrease in substrate increased interspecific competition within the MOB community, especially between different types of MOBs, in the high-water-level period.

High exogenous humus inhibits greenhouse gas emissions from steppe lakes

Although freshwater lakes are considered to be an important source of greenhouse gas (GHG) emissions, the potential driving mechanisms of such emissions are not well understood, especially in steppe lakes. In this study, the GHG emission characteristics in Hulun Lake Basin, including Hulun Lake, Beier Lake, Wulannuoer Lake, and their surrounding watersheds were investigated. The average methane (CH₄) and nitrous oxide (N₂O) emission fluxes released from rivers were 67.84 ± 20.53 and 0.11 ± 0.04 μg m^-2·min^-1, which were larger than those of lakes, with values of 28.60 ± 13.02 and 0.06 ± 0.02 μg m^-2·min^-1, respectively. Conversely, the average carbon dioxide (CO₂) emission flux from lakes (1816.58 ± 498.98 μg m^-2·min^-1) was higher than that of rivers of (1795.41 ± 670.49 μg m^-2·min^-1). The water in Hulun Lake Basin was rich in organic matter and had a high chemical oxygen demand (COD). Three-dimensional fluorescence combined with a parallel factor analysis (3D-EEM-PARAFAC) demonstrated that the organic matter was composed of four humus types (from Component 1 (C1) to Component 4 (C4)), of which, C1 and C4 were terrestrial humus. The fluorescence index (FI) and humification index (HIX) indicated that the organic matter in the water was mainly imported from exogenous humus. The GHG emission fluxes were negatively correlated with these four components, indicating that GHG emissions were mainly affected by the organic matter source and components, and humus was the most important factor that inhibited GHG emissions in steppe lakes. However, the GHG emission flux was relatively high in some areas of the lake, especially in areas with high nutrient levels or where algal blooms occurred, as evidenced by the significantly positive correlations with total nitrogen (TN), total phosphorous (TP), and chlorophyll-a (chl-a) (p < 0.01). The algae-derived organic matter simulated the decomposition of refractory humus, thus, promoting GHG emissions. These findings are crucial for accurately evaluating the GHG emission fluxes, understanding the carbon cycle, and proposing future management strategies for steppe lakes.

Microbial one‑carbon and nitrogen metabolisms are beneficial to the reservoir recovery after cyanobacterial bloom

Cyanobacterial blooms have profound effects on the structure and function of plankton communities in inland waters, but few studies have focused on the effects of microbial-based processes in one‑carbon and nitrogen cycling on water quality improvement following the bloom. Here, we compared the structure and function of the bacterial community, focusing on microbial one‑carbon and nitrogen metabolisms during and after a cyanobacterial Microcystis bloom in a deep subtropical reservoir. Our data showed that microbial one‑carbon and nitrogen cycles were closely related to different periods of the bloom, and the changes of functional genes in microbial carbon and nitrogen cycling showed the same consistent trend as that of Methylomonas sp. With the receding of the bloom, the abundance of Methylomonas as well as the functional genes of microbial one‑carbon and nitrogen cycling reached the peak and then recovered. Our results indicate that microbial one‑carbon and nitrogen metabolisms were beneficial to the recovery of water quality from the cyanobacterial bloom. This study lays a foundation for a deep understanding of the cyanobacterial decomposition mediated by microbes in one‑carbon and nitrogen cycles in inland freshwaters.

Salinity significantly affects methane oxidation and methanotrophic community in Inner Mongolia lake sediments

Methanotrophs oxidize methane (CH₄) and greatly help in mitigating greenhouse effect. Increased temperatures due to global climate change can facilitate lake salinization, particularly in the regions with cold semiarid climate. However, the effects of salinity on the CH₄ oxidation activity and diversity and composition of methanotrophic community in the sediment of natural lakes at a regional scale are still unclear. Therefore, we collected lake sediment samples from 13 sites in Mongolian Plateau; CH₄ oxidation activities of methanotrophs were investigated, and the diversity and abundance of methanotrophs were analyzed using real-time quantitative polymerase chain reaction and high throughput sequencing approach. The results revealed that the diversity of methanotrophic community decreased with increasing salinity, and community structure of methanotrophs was clearly different between the hypersaline sediment samples (HRS; salinity > 0.69%) and hyposaline sediment samples (HOS; salinity < 0.69%). Types II and I methanotrophs were predominant in HRS and HOS, respectively. Salinity was significantly positively correlated with the relative abundance of Methylosinus and negatively correlated with that of Methylococcus. In addition, CH₄ oxidation rate and pmoA gene abundance decreased with increasing salinity, and salinity directly and indirectly affected CH₄ oxidation rate via regulating the community diversity. Moreover, high salinity decreased cooperative association among methanotrophs and number of key methanotrophic species (Methylosinus and Methylococcus, e.g). These results suggested that salinity is a major driver of CH₄ oxidation in lake sediments and acts by regulating the diversity of methanotrophic community and accociation among the methanotrophic species.

The Impact of Pollution Fee Reform on the Emission of Water Pollutants: Evidence from Manufacturing Enterprises in China

With the development of China's industrial economy and urbanization, water pollution has become serious and gradually exposed to the public. The pollution fee policy is an important tool to force enterprises to reduce pollution. This study used the panel data of manufacturing enterprises during 2006-2013 and the multiperiod difference in differences (DID) method to systematically analyze the impact of water pollution fee reform on emissions of manufacturing enterprises in China. In general, enterprises facing improved pollution fee collection standards reduce COD emissions by approximately 4.1%. However, significant location heterogeneities are captured in China. The rising water pollution fees have promoted the emission reduction of enterprises in northern China and resource-based cities, but the effect is not significant in southern China and nonresource-based cities. Furthermore, the mechanism analysis shows that enterprises mainly reduced emissions through terminal treatment and reducing production. This study provided micro evidence for research on the effect of pollution fee reform and supplied a reference for the improvement of the environmental protection tax system in China.

Eutrophic levels and algae growth increase emissions of methane and volatile sulfur compounds from lakes

Eutrophic lakes are hot spots of CH₄ and volatile sulfur compound (VSC) emissions, especially during algal blooms and decay. However, the response of CH₄ and VSC emissions to lake eutrophication and algae growth as well as the underlying mechanisms remain unclear. In this study, the emissions of CH₄ and VSCs from four regions of Lake Taihu with different eutrophic levels were investigated in four months (i.e., March, May, August and December). The CH₄ emissions ranged from 20.4 to 126.9 mg m^-2 d^-1 in the investigated sites and increased with eutrophic levels and temperature. H₂S and CS₂ were the dominant volatile sulfur compounds (VSCs) emitted from the lake. The CH₄ oxidation potential of water ranged from 2.1 to 14.9 μg h^-1 L^-1, which had positive correlations with trophic level index and the environmental variables except for the NH₄⁺-N concentration. Eutrophic levels could increase the abundances of bacteria and methanotrophs in lake water. α-Proteobacteria methanotroph Methylocystis was more abundant than γ-Proteobacteria methanotrophs in March and May, while the latter was more abundant in August and November. The relative abundance of Cyanobacteria, including Microcystis, A. granulata var. angustissima and Cyanobium had significantly positive correlations with temperature, turbidity, SO₄^2--S, and total sulfur. Partial least squares path modelling revealed that the algal growth could promote VSC emissions, which had a positive correlation with CH₄ oxidation potential, likely due to the positive correlation between the CH₄ and VSC emissions from lakes. These findings indicate that water eutrophication and algae growth could increase the emissions of CH₄ and VSCs from lakes. Controlling algae growth might be an effective way to mitigate the emissions of CH₄ and VSCs from freshwater lakes.

Nitrite and nitrate reduction drive sediment microbial nitrogen cycling in a eutrophic lake

The anaerobic microbial nitrogen (N) removal in lake sediments is one of the most important processes driving the nitrogen cycling in lake ecosystems. However, the N removal and its underlying mechanisms regulated by denitrifying and anaerobic ammonia oxidation (anammox) bacteria in lake sediments remain poorly understood. With the field sediments collected from different areas of Lake Donghu (a shallow eutrophic lake), we examined the denitrifying and anammox bacterial communities by sequencing the nirS/K and hzsB genes, respectively. The results indicated that denitrifiers in sediments were affiliated to nine clusters, which are involved in both heterotrophic and autotrophic denitrification. However, anammox bacteria were only dominated by Candidatus Brocadia. We found that NO₃^- and NO₂^- concentrations, as well as Nar enzyme activity were the key factors affecting denitrifying and anammox communities in this eutrophic lake. The enrichment experiments in bioreactors confirmed the divergence of denitrification and anammox rates with an additional complement of NO₂^-, especially under a condition low nitrate reductase activity. The coupled denitrification and anammox may play significant roles in N removal, and the availability of electronic acceptors (i.e., NO₂^- and NO₃^-) strongly influenced the N loss in lake sediments. Further path analysis indicated that NO₂^-, NO₃^- and some N-related enzymes were the key factors affecting microbial N removal in lake sediments. This study advances our understanding of the mechanisms driving the of denitrification and anammox in lake sediments, which also provides new insights into coupled denitrification-anammox N removal in eutrophic lake ecosystems.

Twenty years of China's water pollution control: Experiences and challenges

Water pollution is a major environmental problem worldwide, especially in developing countries. China's environmental protection strategies have been pushed to the highest priority in history, driving remarkable achievements in water pollution control, but were also coupled with new challenges. In this study, we analyzed diverse long-term data (i.e. water quality, WWTPs, pollutant discharge etc.) to systematically understand the process of water pollution control in China in the last twenty years. The results highlighted that the collection and treatment capacity of wastewater in China approached the developed country level, with the treatment rates exceeding 90% both in urban and country areas. The environmental quality of surface water was continuously improved, but water pollution problems remained in the river basins of eastern China, with remarkable economic progress. Rapid economic growth rather than population growth was the limiting factor for water pollution control in China. Therefore, more efforts should be made to further improve wastewater collection and treatment capacity and address the gap between effluent discharge limits for wastewater treatment plants and environmental quality standards for surface water. China's progress toward water pollution control provided important insights for other developing countries.

Methane-Derived Carbon as a Driver for Cyanobacterial Growth

Methane, a potent greenhouse gas produced in freshwater ecosystems, can be used by methane-oxidizing bacteria (MOB) and can therefore subsidize the pelagic food web with energy and carbon. Consortia of MOB and photoautotrophs have been described in aquatic ecosystems and MOB can benefit from photoautotrophs which produce oxygen, thereby enhancing CH₄ oxidation. Methane oxidation can account for accumulation of inorganic carbon (i.e., CO₂) and the release of exometabolites that may both be important factors influencing the structure of phytoplankton communities. The consortium of MOB and phototroph has been mainly studied for methane-removing biotechnologies, but there is still little information on the role of these interactions in freshwater ecosystems especially in the context of cyanobacterial growth and bloom development. We hypothesized that MOB could be an alternative C source to support cyanobacterial growth in freshwater systems. We detected low δ¹³C values in cyanobacterial blooms (the lowest detected value −59.97‰ for Planktothrix rubescens) what could be the result of the use of methane-derived carbon by cyanobacteria and/or MOB attached to their cells. We further proved the presence of metabolically active MOB on cyanobacterial filaments using the fluorescein isothiocyanate (FITC) based activity assay. The PCR results also proved the presence of the pmoA gene in several non-axenic cultures of cyanobacteria. Finally, experiments comprising the co-culture of the cyanobacterium Aphanizomenon gracile with the methanotroph Methylosinus sporium proved that cyanobacterial growth was significantly improved in the presence of MOB, presumably through utilizing CO₂ released by MOB. On the other hand, ¹³C-CH₄ labeled incubations showed the uptake and assimilation of MOB-derived metabolites by the cyanobacterium. We also observed a higher growth of MOB in the presence of cyanobacteria under a higher irradiance regime, then when grown alone, underpinning the bidirectional influence with as of yet unknown environmental consequences.

DNA-SIP reveals an overlooked methanotroph, Crenothrix sp., involved in methane consumption in shallow lake sediments

Methanotrophs are the main consumers of methane produced in lake sediments. In shallow lakes suffering from eutrophication, methanogenesis is accelerated by the excess organic carbon input, and thus methanotrophs play a key role in regulating this methane flux as well as carbon cycling. Here, we applied nucleic acid stable isotope probing (SIP) to investigate the active methanotrophic microbial community in sediments of several shallow lakes affected by eutrophication. Our results showed that an active methanotrophic community dominated by gamma-proteobacterial methanotrophs, as well as abundant beta-proteobacterial methanol-utilizers, was involved in methane-derived carbon assimilation. Crenothrix, a filamentous methanotroph, was found to be a key methane consumer in all studied lakes. The ecological role of Crenothrix in lacustrine ecosystems is so far poorly understood, with only limited information on its existence in the water column of stratified lakes. Our results provide a novel ecological insight into this group by revealing a wide distribution of Crenothrix in lake sediments. The active methane assimilation by Crenothrix also suggested that it might represent a so far overlooked but crucial biological sink of methane in shallow lakes.

Pollution alters methanogenic and methanotrophic communities and increases dissolved methane in small ponds

Small ponds have become a hotspot of greenhouse gas emissions, but our understanding of methane (CH₄) cycling and its biological regulation in small polluted ponds remains limited. To assess how pollution affects CH₄ content, we investigated dissolved CH₄ concentrations, water and sediments properties, methanogenic and methanotrophic communities in two types of small polluted ponds. Compared with low pollution (LP) ponds, high pollution (HP) ponds showed significantly (P < 0.05) higher dissolved CH₄ in water. Sequencing of methyl coenzyme M reductase (mcrA) and particulate methane monooxygenase (pmoA) genes showed that HP led to significant (P < 0.05) shifts of CH₄-cycling microbial communities, with increased Shannon index of sediment methanogenic communities and water methanotrophic communities. There were also strong negative associations (P < 0.05) between dissolved CH₄ concentrations and interdomain methanogen-methanotroph network connectivity in water and sediments, respectively. The partial least squares path modeling indicated that dissolved oxygen, total organic carbon, ammonium nitrogen and nitrate nitrogen of water, and total nitrogen and total carbon of sediment, and CH₄-cycling microbes could regulate the CH₄ content. This study clarified the effects of environmental deterioration on CH₄ cycling in small ponds, highlighting the use of methanogen-methanotroph network connectivity to assess the CH₄ production.

Seasonal dynamics of methanotrophic bacteria in a boreal oil sands end-pit lake

Base Mine Lake (BML) is the first full-scale demonstration end pit lake for the oil sands mining industry in Canada. We examined aerobic methanotrophic bacteria over all seasons for five years in this dimictic lake. Methanotrophs comprised up to 58% of all bacterial reads in 16S rRNA gene amplicon sequencing analyses (median 2.8%), and up to 2.7 × 10⁴ cells mL^-1 of water (median 0.5 × 10³) based on qPCR of pmoA genes. Methanotrophic activity and populations in the lake water were highest during fall turnover, and remained high through the winter ice-covered period into spring turnover. They declined during summer stratification, especially in the epilimnion. Three methanotroph genera (Methylobacter, Methylovulum, and Methyloparacoccus) cycled seasonally, based on both relative and absolute abundance measurements. Methylobacter and Methylovulum populations peaked in winter/spring, when methane oxidation activity was psychrophilic. Methyloparacoccus populations increased in the water column through summer and fall, when methane oxidation was mesophilic, and also predominated in the underlying tailings sediment. Other, less abundant genera grew primarily during summer, possibly due to distinct CH₄/O₂ microniches created during thermal stratification. These data are consistent with temporal and spatial niche differentiation based on temperature, CH₄ and O₂. This pit lake displays methane cycling and methanotroph population dynamics similar to natural boreal lakes. Importance statement: The study examined methanotrophic bacteria in an industrial end pit lake, combining molecular DNA methods (both quantitative and descriptive) with biogeochemical measurements. The lake was sampled over 5 years, in all four seasons, as often as weekly, and included sub-ice samples. The resulting multi-season and multi-year dataset is unique in its size and intensity, and allowed us to document clear and consistent seasonal patterns of growth and decline of three methanotroph genera (Methylobacter, Methylovulum, and Methyloparacoccus). Laboratory experiments suggested that one major control of this succession was niche partitioning based on temperature. The study helps to understand microbial dynamics in engineered end-pit lakes, but we propose that the dynamics are typical of boreal stratified lakes, and widely applicable in microbial ecology and limnology. Methane oxidising bacteria are important model organisms in microbial ecology, and have implications for global climate change.

Insights into the potential impact of algae-mediated wastewater beneficiation for the circular bioeconomy: A global perspective

Algae-based technologies are one of the emerging solutions to societal issues such as accessibility to clean water and carbon-neutral energy and are a contender for the circular bioeconomy. In this review, recent developments in the use of different algal species for nutrient recovery and biomass production in wastewater, challenges, and future perspectives have been addressed. The ratio and bioavailability of nutrients in wastewater are vital parameters, which significantly impact nutrient recovery efficiency and algal biomass production. However, the optimum nutrient concentration and ratio may vary depending upon the microalgal species as well as cultivation conditions. The use of indigenous algae and algae-based consortia with other microorganisms has been proved promising in improving nutrient recovery efficiency and biomass production in pilot scale operations. However, environmental and cultivation conditions also play a significant role in determining the feasibility of the process. This review further focused on the assessment of the potential benefits of algal biomass production, renewable biofuel generation, and CO₂ sequestration using wastewater in different countries on the basis of available data on wastewater generation and estimated nutrient contents. It was estimated that 5-10% replacement of fossil crude requirement with algal biofuels would require ~952-1903 billion m³ of water, 10-21 billion tons of nitrogen, and 2-4 billion tons of phosphorus fertilizers. In this context, coupling wastewater treatment and algal biomass production seem to be the most sustainable option with potential global benefits of polishing wastewater through nutrients recycling and carbon dioxide sequestration.

Candidatus Methylumidiphilus Drives Peaks in Methanotrophic Relative Abundance in Stratified Lakes and Ponds Across Northern Landscapes

Boreal lakes and ponds produce two-thirds of the total natural methane emissions above the latitude of 50° North. These lake emissions are regulated by methanotrophs which can oxidize up to 99% of the methane produced in the sediments and the water column. Despite their importance, the diversity and distribution of the methanotrophs in lakes are still poorly understood. Here, we used shotgun metagenomic data to explore the diversity and distribution of methanotrophs in 40 oxygen-stratified water bodies in boreal and subarctic areas in Europe and North America. In our data, gammaproteobacterial methanotrophs (order Methylococcales) generally dominated the methanotrophic communities throughout the water columns. A recently discovered lineage of Methylococcales, Candidatus Methylumidiphilus, was present in all the studied water bodies and dominated the methanotrophic community in lakes with a high relative abundance of methanotrophs. Alphaproteobacterial methanotrophs were the second most abundant group of methanotrophs. In the top layer of the lakes, characterized by low CH4 concentration, their abundance could surpass that of the gammaproteobacterial methanotrophs. These results support the theory that the alphaproteobacterial methanotrophs have a high affinity for CH4 and can be considered stress-tolerant strategists. In contrast, the gammaproteobacterial methanotrophs are competitive strategists. In addition, relative abundances of anaerobic methanotrophs, Candidatus Methanoperedenaceae and Candidatus Methylomirabilis, were strongly correlated, suggesting possible co-metabolism. Our data also suggest that these anaerobic methanotrophs could be active even in the oxic layers. In non-metric multidimensional scaling, alpha- and gammaproteobacterial methanotrophs formed separate clusters based on their abundances in the samples, except for the gammaproteobacterial Candidatus Methylumidiphilus, which was separated from these two clusters. This may reflect similarities in the niche and environmental requirements of the different genera within alpha- and gammaproteobacterial methanotrophs. Our study confirms the importance of O2 and CH4 in shaping the methanotrophic communities and suggests that one variable cannot explain the diversity and distribution of the methanotrophs across lakes. Instead, we suggest that the diversity and distribution of freshwater methanotrophs are regulated by lake-specific factors.

Eutrophication effects on CH4 and CO2 fluxes in a highly urbanized tropical reservoir (Southeast, Brazil)

Shallow urban polluted reservoirs at tropical regions can be hotspots for CO2 and CH4 emissions. In this study, we investigated the relationships between eutrophication and GHG emissions in a highly urbanized tropical reservoir in São Paulo Metropolitan Area (Brazil). CO2 and CH4 fluxes and limnological variables (water and sediment) were collected at three sampling stations classified as hypereutrophic and eutrophic. Analysis of variance (ANOVA) and the principal component analysis (PCA) determined the most significant parameters to CO2 and CH4 fluxes. ANOVA showed significant differences of CO2 and CH4 fluxes between sampling stations with different trophic state. The hypereutrophic station showed higher mean fluxes for both CO2 and CH4 (5.43 ± 1.04 and 0.325 ± 0.167 g m-2 d-1, respectively) than the eutrophic stations (3.36 ± 0.54 and 0.060 ± 0.005 g m-2 d-1). The PCA showed a strong relationship between nutrients in the water column (surface and bottom) and GHG fluxes. We concluded that GHG fluxes were higher whenever the trophic state increases as observed previously in temperate and tropical reservoirs. High concentrations of nutrients in the water column in the studied area support the high production of autotrophic biomass that, when sedimented, ends up serving as organic matter for CH4 producers. These outcomes reinforce the necessity of water quality improvement and eutrophication mitigation in highly urbanized reservoirs in tropical regions.

Global co-occurrence of methanogenic archaea and methanotrophic bacteria in Microcystis aggregates

Global warming and eutrophication contribute to the worldwide increase in cyanobacterial blooms, and the level of cyanobacterial biomass is strongly associated with rises in methane emissions from surface lake waters. Hence, methane-metabolizing microorganisms may be important for modulating carbon flow in cyanobacterial blooms. Here, we surveyed methanogenic and methanotrophic communities associated with floating Microcystis aggregates in 10 lakes spanning four continents, through sequencing of 16S rRNA and functional marker genes. Methanogenic archaea (mainly Methanoregula and Methanosaeta) were detectable in 5 of the 10 lakes and constituted the majority (~50%-90%) of the archaeal community in these lakes. Three of the 10 lakes contained relatively more abundant methanotrophs than the other seven lakes, with the methanotrophic genera Methyloparacoccus, Crenothrix, and an uncultured species related to Methylobacter dominating and nearly exclusively found in each of those three lakes. These three are among the five lakes in which methanogens were observed. Operational taxonomic unit (OTU) richness and abundance of methanotrophs were strongly positively correlated with those of methanogens, suggesting that their activities may be coupled. These Microcystis-aggregate-associated methanotrophs may be responsible for a hitherto overlooked sink for methane in surface freshwaters, and their co-occurrence with methanogens sheds light on the methane cycle in cyanobacterial aggregates.

Roles of Oxygen in Methane-dependent Selenate Reduction in a Membrane Biofilm Reactor: Stimulation or Suppression

Although methane (CH₄) has been proven to be able to serve as an electron donor for bio-reducing various oxidized contaminants (e.g., selenate (SeO₄^2-)), little is known regarding the roles of oxygen in methane-based reduction processes. Here, a methane-based membrane biofilm reactor (MBfR) was established for evaluating the effects of oxygen supply rates on selenate reduction performance and microbial communities. The oxygen supply rate played a dual role (stimulatory or suppressive effect) in selenate reduction rates, depending on the presence or absence of dissolved oxygen (DO). Specifically, selenate reduction rate was substantially enhanced when an appropriate oxygen rate (e.g., 12 to 184 mg/L^.d in this study) was supplied but with negligible DO. The highest selenate reduction rate (up to 34 mg-Se/L^.d) was obtained under an oxygen supply rate of 184 mg/L^.d. In contrast, excessive oxygen supply rate (626 mg/L^.d) would significantly suppress selenate reduction rate under DO level of 3 mg/L. Accordingly, though the high oxygen supply rate (626 mg/L^.d) would promote the expression of pmoA (5.9 × 10⁹ copies g^-1), the expression level of narG (a recognized gene to mediate selenate reduction) would be significantly downregulated (6.1 × 10⁹ copies g^-1), thus suppressing selenate reduction. In contrast, the expression of narG gene significantly increased to 2.8 × 10¹⁰ copies g^-1, and the expression of pmoA gene could still maintain at 1.1 × 10⁹ copies g^-1 under an oxygen supply rate of 184 mg/L^.d. High-throughput sequencing targeting 16S rRNA gene, pmoA, and narG collectively suggested Methylocystis acts as the major aerobic methanotroph, in synergy with Arthrobacter and Variovorax which likely jointly reduce selenate to selenite (SeO₃^2-), and further to elemental selenium (Se⁰). Methylocystis was predominant in the biofilm regardless of variations of oxygen supply rates, while Arthrobacter and Variovorax were sensitive to oxygen fluctuation. These findings provide insights into the effects of oxygen on methane-dependent selenate reduction and suggest that it is feasible to achieve a higher selenate removal by regulating oxygen supply rates.

Effects of phytoplankton blooms on fluxes and emissions of greenhouse gases in a eutrophic lake

Lakes are important sources of greenhouse gases (GHGs) to the atmosphere. Factors controlling CO₂, CH₄ and N₂O fluxes include eutrophication and warming, but the integrated influence of climate-warming-driven stratification, oxygen loss and resultant changes in bloom characteristics on GHGs are not well understood. Here we assessed the influence of contrasting meteorological conditions on stratification and phytoplankton bloom composition in a eutrophic lake, and tested for associated changes in GHGs inventories in both the shallow and deep waters, over three seasons (2010-2012). Atmospheric heatwaves had one of the most dramatic effects on GHGs. Indeed, cyanobacterial blooms that developed in response to heatwave events in 2012 enhanced both sedimentary CH₄ concentrations (reaching up to 1mM) and emissions to the atmosphere (up to 8 mmol m^-2 d^-1). That summer, CH₄ contributed 52% of the integrated warming potential of GHGs produced in the lake (in CO₂ equivalents) as compared to between 34 and 39% in years without cyanobacterial blooms. High CH₄ accumulation and subsequent emission in 2012 were preceded by CO₂ and N₂O consumption and under-saturation at the lake surface (uptakes at -30 mmol m^-2 d^-1 and -1.6 µmol m^-2 d^-1, respectively). Fall overturn presented a large efflux of N₂O and CH₄, particularly from the littoral zone after the cyanobacterial bloom. We provide evidence that, despite cooling observed at depth during hot summers, CH₄ emissions increased via stronger stratification and surface warming, resulting in enhanced cyanobacterial biomass deposition and intensified bottom water anoxia. Our results, supported by recent literature reports, suggests a novel interplay between climate change effects on lake hydrodynamics that impacts both bloom characteristics and GHGs production in shallow eutrophic lakes. Given global trends of warming and enrichment, these interactive effects should be considered to more accurately predict the future global role of lakes in GHG emissions.

Seasonal Distribution of Cyanobacteria in Three Urban Eutrophic Lakes Results from an Epidemic-like Response to Environmental Conditions

Cyanobacterial communities of three co-located eutrophic sandpit lakes were surveyed during 2016 and 2017 over season and depth using high-throughput DNA sequencing of the 16S rRNA gene. All three lakes were stratified except during April 2017 when the lakes were recovering from a strong mixing event. 16S rRNA gene V4 sequences were parsed into operational taxonomic units (OTUs) at 99% sequence identity. After rarefaction of 139 samples to 25,000 sequences per sample, a combined total of 921,529 partial 16S rRNA gene sequences were identified as cyanobacteria. They were binned into 19,588 unique cyanobacterial OTUs. Of these OTUs, 11,303 were Cyanobium. Filamentous Planktothrix contributed 1537 and colonial Microcystis contributed 265. The remaining 6482 OTUs were considered unclassified. For Planktothrix and Microcystis one OTU accounted for greater than 95% of the total sequences for each genus. However, in both cases the non-dominant OTUs clustered with the dominant OTUs by date, lake, and depth. All Planktothrix OTUs and a single Cyanobium OTU were detected below the oxycline. All other Cyanobium and Microcystis OTUs were detected above the oxycline. The distribution of Cyanobium OTUs between lakes and seasons can be explained by an epidemic-like response where individual OTUs clonally rise from a diverse hypolimnion population when conditions are appropriate. The importance of using 99% identity over the more commonly used 97% is discussed with respect to cyanobacterial community structure. The approach described here can provide another valuable tool for assessing cyanobacterial populations and provide greater insight into the controls of cyanobacterial blooms.

Primacy of ecological engineering tools for combating eutrophication: An ecohydrological assessment pathway

Eutrophication of freshwater bodies causes loss of earth's biological resources and aggravates climate change, thus assuming major environmental concern. Both endogenous and exogenous nutrient enrichment are responsible for eutrophication. Numerous monitoring and management studies conducted worldwide have resulted high-level technological innovations. These studies cumulatively uphold the significance of ecohydrological and ecological engineering approaches. However, holistic and insightful reviews with feasible recommendations of such huge academic outputs are rather scanty. Therefore, our main objective was to introduce a new perspective of eutrophication as an ecohydrological component; to discover all possibilities of monitoring and restoration of eutrophic water bodies. Furthermore, the present study critically analyzes various methods of treatment of eutrophication (physical, biological, chemical, and eco-engineering). Comprehensive volume of literature has been surveyed using search engines like Scopus, Google Scholar, PubMed, ScienceDirect etc. Meaningful keywords were used to obtain reliable information on methods of ecohydrological assessment in relation to eutrophication of freshwater bodies. According to our survey, ecohydrological research is diversified into conceptual knowledge (37.2%), assessment (32.6%), climate change (9.3%), algae/cyanotoxins (7%), engineering and restoration (7%), modelling (4.6%) and biodiversity (2.3%), in the instant decade (2010-2020). We have identified a clear trend of transition of restoration methods from traditional towards modern techniques over time. Moreover, this review recognizes a pool of biophysicochemical and ecological engineering techniques, which are very effective in regard to time, cost, and labor and have immense scopes of modification for improved results. This work focuses on the importance of ecohydrology and eco-engineering tools for restoration of eutrophic water bodies for the first time. We have highlighted how these approaches have emerged as one of the best suitable and sustainable water resource conservation routes in the present era.

Ecosystem maturity modulates greenhouse gases fluxes from artificial lakes

Lentic ecosystems play a major role in the global carbon cycling but the understanding of the environmental determinants of lake metabolism is still limited, notably in small artificial lakes. Here the effects of environmental conditions on lake metabolism and CO₂ and CH₄ emissions were quantified in 11 small artificial gravel pit lakes covering a gradient of ecosystem maturity, ranging from young oligotrophic to older, hypereutrophic lakes. The diffusive fluxes of CO₂ and CH₄ ranged from -30.10 to 37.78 mmol m^-2 d^-1 and from 3.05 to 25.45 mmol m^-2 d^-1 across gravel pit lakes, respectively. Nutrients and chlorophyll a concentrations were negatively correlated with CO₂ concentrations and emissions but positively correlated with CH₄ concentrations and emissions from lakes. These findings indicate that, as they mature, gravel pit lakes switch from heterotrophic to autotrophic-based metabolism and hence turn into CO₂-sinks. In contrast, the emission of CH₄ increased along the maturity gradient. As a result, eutrophication occurring during ecosystem maturity increased net emissions in terms of climate impact (CO_{2 equivalent}) due to the higher contribution of CH₄ emissions. Overall, mean CO_2equivalent emission was 7.9 g m^-2 d^-1, a value 3.7 and 4.7 times higher than values previously reported in temperate lakes and reservoirs, respectively. While previous studies reported that lakes represent emitters of C to the atmosphere, this study highlights that eutrophication may reverse lake contribution to global C budgets. However, this finding is to be balanced with the fact that eutrophication also increased CH₄ emissions and hence, enhanced the potential impact of these ecosystems on climate. Implementing mitigation strategies for maintaining intermediate levels of maturity is therefore needed to limit the impacts of small artificial waterbodies on climate. This could be facilitated by their small size and should be planned at the earliest stages of artificial lake construction.

Spatial variations in diffusive methane fluxes and the role of eutrophication in a subtropical shallow lake

Shallow lakes account for most of the diffusive CH₄ emissions from global lakes, and they also suffer from eutrophication worldwide. Determining the effect of eutrophication on diffusive CH₄ fluxes is fundamental to understanding CH₄ emissions in shallow lakes. This study aimed to investigate the spatial variations in diffusive CH₄ fluxes and explore the role of eutrophication in Lake Chaohu, a large and shallow eutrophic lake in the lower reaches of the Yangtze River. A one-year field observation was carried out to examine CH₄ concentrations in the sediment and water and the diffusive fluxes of CH₄ across the sediment-water interface (F_s-w) and water-air interface (F_w-a). Both F_s-w (0.306-1.56 mmol m^-2 d^-1) and F_w-a (0.097-0.529 mmol m^-2 d^-1) were upward and showed significant spatial heterogeneity and were significantly positively correlated. Parameters related to eutrophication had significant positive relationships with F_w-a, and the total phosphorus distribution in the water explained the greatest proportion of the spatial variation in F_w-a. Distance to shore and water depth were inversely correlated with F_w-a and modified the effects of eutrophication. Overall, the results provide direct evidence of the key role of eutrophication in shaping the spatial distribution of diffusive CH₄ fluxes and a scientific basis for predicting changes in CH₄ emissions with future eutrophication changes in shallow lakes in subtropical zones.

Expanding ecological assessment by integrating microorganisms into routine freshwater biomonitoring

Bioindication has become an indispensable part of water quality monitoring in most countries of the world, with the presence and abundance of bioindicator taxa, mostly multicellular eukaryotes, used for biotic indices. In contrast, microbes (bacteria, archaea and protists) are seldom used as bioindicators in routine assessments, although they have been recognized for their importance in environmental processes. Recently, the use of molecular methods has revealed unexpected diversity within known functional groups and novel metabolic pathways that are particularly important in energy and nutrient cycling. In various habitats, microbial communities respond to eutrophication, metals, and natural or anthropogenic organic pollutants through changes in diversity and function. In this review, we evaluated the common trends in these changes, documenting that they have value as bioindicators and can be used not only for monitoring but also for improving our understanding of the major processes in lotic and lentic environments. Current knowledge provides a solid foundation for exploiting microbial taxa, community structures and diversity, as well as functional genes, in novel monitoring programs. These microbial community measures can also be combined into biotic indices, improving the resolution of individual bioindicators. Here, we assess particular molecular approaches complemented by advanced bioinformatic analysis, as these are the most promising with respect to detailed bioindication value. We conclude that microbial community dynamics are a missing link important for our understanding of rapid changes in the structure and function of aquatic ecosystems, and should be addressed in the future environmental monitoring of freshwater ecosystems.

Excellent selectivity and high capacity of As (V) removal by a novel lignin-based adsorbent doped with N element and modified with Ca2

As one of the most significant natural polymer with the highest annual yield, lignin has been applied in the treatment of wastewater to remove heavy metal ions. However, there are still some shortages, such as low reactivity, difficulties in adsorbing oxyanions and low selectivity on specific oxyanions. To improve its adsorption properties, a novel lignin-based adsorbent was prepared in this study, doped with nitrogen by Mannich reaction, using triethylenetetramine (TETA) as N source, and further modified with Ca²⁺. The adsorption of Ca, N-co-doped lignin (Ca@N-Lig) for As (V), Cr (VI) and P (V) was studied. The Ca@N-Lig shows high capacity, excellent selectivity and prominent regeneration ability for As (V) adsorption. The adsorption of Ca@N-Lig for As (V) followed the Langmuir isotherm model and the pseudo-second-order kinetics model, yielding a maximum adsorption capacity of 681.59 mg·g^-1 and a fast adsorption equilibrium within 30 min. Ca@N-Lig has an excellent regeneration ability on the adsorption of As (V) with a decrease of about 15.60% after 5 adsorption/desorption cycles. This study offers an efficient way to remove As (V) from polluted water.

Nonlinear response of methane release to increased trophic state levels coupled with microbial processes in shallow lakes

Shallow lakes are a crucial source of methane (CH₄), a potent greenhouse gas, to the atmosphere. However, large uncertainties still exist regarding the response of CH₄ emissions to the increasing trophic levels of lakes as well as the underlying mechanisms. Here, we investigate the CH₄ emission flux from lakes with different trophic states in the middle and lower reaches of the Yangtze River basin, China to evaluate the effect of the trophic lake index (TLI) on CH₄ emissions. The mean CH₄ emission fluxes from mesotrophic, eutrophic, middle-eutrophic, and hyper-eutrophic lakes were 0.1, 4.4, 12.0, and 130.4 mg m^-2 h^-1, respectively. Thus, the CH₄ emission flux ranged widely and was positively correlated with the degree of eutrophication. The relative abundance of methanogens with respect to the total population for the mesotrophic, eutrophic, mid-eutrophic, and hyper-eutrophic states was 0.03%, 0.35%, 0.94%, and 1.17%, respectively. The biogeographic-scale pattern of lakes classified as each of these four trophic states indicated that CH₄ emissions could be well-predicted by the NH₄⁺-N concentration in the water column, as both NH₄⁺-N and CH₄ were produced during mineralisation of labile organic matter in lake sediment. In addition, the shift from clear to turbid water, which is an unhealthy evolution for lakes, was associated with a nonlinear increase in the CH₄ emissions from the studied lakes. In particular, the hypereutrophic lakes functioned as CH₄ emission hotspots. Our findings highlight that nutrient levels, as a potential facilitator of CH₄ emissions, should be considered in future research to accurately evaluate the greenhouse gas emissions from shallow lakes.

Enhanced carbon and nitrogen removal in an integrated anaerobic/anoxic/aerobic-membrane aerated biofilm reactor system

A pilot-scale anaerobic/anoxic/aerobic-membrane aerated biofilm reactor (A2/O-MABR) system was constructed to enhance carbon and nitrogen removal. The effects of major operating parameters including the nitrate recycling ratio (R), sludge recycling ratio (r), and aerobic tank dissolved oxygen (DO) concentration on the system performance were investigated. The average removal efficiencies of the chemical oxygen demand (COD), ammonium nitrogen (NH4 +-N), and total nitrogen (TN) were 89.0 ± 3.2%, 98.8 ± 1.3%, and 68.5 ± 4.2%, respectively, and their effluent concentrations were averagely 22.6 ± 7.3, 0.32 ± 0.2, and 13.3 ± 1.2 mg L-1. The suspended sludge and biofilm in aerobic tank facilitated the simultaneous nitrification and denitrification (SND) processes. Indeed, unique biofilm layered structure and abundant microbial community in the biofilm on MABR would enhance nitrogen removal. Compared with the A2/O system, the A2/O-MABR system exhibited higher nitrifying bacteria oxygen uptake rate (OUR) of 58.1 and 54.5 mgO2 per gMLSS per h in suspended sludge and biofilm, respectively, and the lower mixed liquor suspended solid (MLSS) concentration of 1800 mg L-1. Moreover, high-throughput sequencing indicated that putative nitrogen removal bacteria such as Thauera and Paracoccus could be effectively enriched in the biofilm. Since the volume proportions of the anaerobic, anoxic, aerobic and settling tank in the existing A2/O system of the WWTP was not changed, the A2/O-MABR system was simple and practical for the upgrading of A2/O system.

Linking Shifts in Bacterial Community Composition and Function with Changes in the Dissolved Organic Matter Pool in Ice-Covered Baiyangdian Lake, Northern China

The relationship between CDOM (Chromophoric dissolved organic matter) and the bacterial community was investigated in ice-covered Baiyangdian Lake. The results showed that environmental parameters significantly differed in Baiyangdian Lake, whereas a-diversity was not significantly different. Moreover, the microbial and functional communities exhibited significant differences, and T (Temperature), pH, ORP (Oxidation-reduction potential), DO (Dissolved oxygen), NO₃⁻-N, NH₄⁺-N, and Mn (Manganese) were the main environmental factors of these differences, based on redundancy analysis and the Mantel test. Biomarkers of the microbial and functional communities were investigated through linear discriminant analysis effect size and STAMP analysis. The number of biomarkers in the natural area was highest among the typical zones, and most top functions were related to carbohydrate metabolism. Two protein-like components (C1 and C2) and one humic-like component (C3) were identified by parallel factor analysis, and C1 was positively related to C2 (R = 0.99, p < 0.001), indicating the same sources. Moreover, CDOM significantly differed among the typical zones (p < 0.001). The high biological index, fluorescence index, β:α, and low humification index indicated a strong autochthonous component and aquatic bacterial origin, which was consistent with the results of UV-vis absorption spectroscopy. Network analysis revealed non-random co-occurrence patterns. The bacterial and functional communities interacted closely with CDOM. The dominant genera were CL500-29_marine_group, Flavobacterium, Limnohabitans, and Candidatus_Aquirestis. Random forest analysis showed that C1, C2, and C3 are important predictors of α- and β-diversity in the water bacterial community and its functional composition. This study provides insight into the interaction between bacterial communities and DOM (Dissolved organic matter) in ice-covered Baiyangdian Lake.

Effects of oxygen tension on the microbial community and functional gene expression of aerobic methane oxidation coupled to denitrification systems

Aerobic CH₄ oxidation coupled to denitrification (AME-D) can not only mitigate the emission of greenhouse gas (e.g., CH₄) to the atmosphere, but also reduce NO₃^- and/or NO₂^- and alleviate nitrogen pollution. The effects of O₂ tension on the community and functional gene expression of methanotrophs and denitrifiers were investigated in this study. Although higher CH₄ oxidation occurred in the AME-D system with an initial O₂ concentration of 21% (i.e., the O₂-sufficient condition), more NO₃^--N was removed at the initial O₂ concentration of 10% (i.e., the O₂-limited environment). Type I methanotrophs, including Methylocaldum, Methylobacter, Methylococcus, Methylomonas, and Methylomicrobium, and type II methanotrophs, including Methylocystis and Methylosinus, dominated in the AME-D systems. Compared with type II methanotrophs, type I methanotrophs were more abundant in the AME-D systems. Proteobacteria and Actinobacteria were the main denitrifiers in the AME-D systems, and their compositions varied with the O₂ tension. Quantitative PCR of the pmoA, nirS, and 16S rRNA genes showed that methanotrophs and denitrifiers were the main microorganisms in the AME-D systems, accounting for 46.4% and 24.1% in the O₂-limited environment, respectively. However, the relative transcripts of the functional genes including pmoA, mmoX, nirK, nirS, and norZ were all less than 1%, especially the functional genes involved in denitrification under the O₂-sufficient condition, likely due to the majority of the denitrifiers being dormant or even nonviable. These findings indicated that an optimal O₂ concentration should be used to optimize the activity and functional gene expression of aerobic methanotrophs and denitrifiers in AME-D systems.

Sulfadiazine degradation in soils: Dynamics, functional gene, antibiotic resistance genes and microbial community

Sulfonamides and their corresponding antibiotic resistance genes (ARGs) are widespread in the environment, which leads to a major threat to global health crisis. Biodegradation plays a major role in sulfonamides removal in soil ecosystem, but the degradation dynamics and the associated functional bacteria in situ remain unclear. In this study, aerobic degradation of sulfadiazine (SDZ) at two dosages (1 and 10 mg/kg) was explored for up to 70 days in two different agricultural soils. The removal of SDZ in all treatments followed first-order multi-compartment model with half-life times of 0.96-2.57 days, and DT50 prolonged with the increase of initial dosage. A total of seven bacterial genera, namely Gaiella, Clostrium_sensu_stricto_1, Tumebacillus, Roseiflexus, Variocorax, Nocardioide and Bacillus, were proposed as the potential SDZ-degraders. sadA gene was for the first time detected in soil samples, but other functional genes might also participate in SDZ degradation. The enrichment of sulfonamide resistance genes was found after 70 days' incubation, which might result in the spread of ARGs in soil. This study can add some new insights towards SDZ degradation in soil ecosystem and provide a potential resource for the bioremediation of SDZ-contaminated soil.

MODIS-Satellite-Based Analysis of Long-Term Temporal-Spatial Dynamics and Drivers of Algal Blooms in a Plateau Lake Dianchi, China

Algal blooms in eutrophic lakes have been a global issue to environmental ecology. Although great progress on prevention and control of algae have been made in many lakes, systematic research on long-term temporal-spatial dynamics and drivers of algal blooms in a plateau Lake Dianchi is so far insufficient. Therefore, the algae pixel-growing algorithm (APA) was used to accurately identify algal bloom areas at the sub-pixel level on the Moderate Resolution Imaging Spectroradiometer (MODIS) data from 2000 to 2018. The results showed that algal blooms were observed all year round, with a reduced frequency in winter–spring and an increased frequency in summer–autumn, which lasted a long time for about 310–350 days. The outbreak areas were concentrated in 20–80 km2 and the top three largest areas were observed in 2002, 2008, and 2017, reaching 168.80 km2, 126.51 km2, and 156.34 km2, respectively. After deriving the temporal-spatial distribution of algal blooms, principal component analysis (PCA) and redundancy analysis (RDA) were applied to explore the effects of meteorological, water quality and human activities. Of the variables analyzed, mean temperature (Tmean) and wind speed (WS) were the main drivers of daily algal bloom areas and spatial distribution. The precipitation (P), pH, and water temperature (WT) had a strong positive correlation, while WS and sunshine hours (SH) had a negative correlation with monthly maximum algal bloom areas and frequency. Total nitrogen (TN) and dissolved oxygen (DO) were the main influencing factors of annual frequency, initiation, and duration of algal blooms. Also, the discharge of wastewater and the southwest and southeast monsoons may contribute to the distribution of algal blooms mainly in the north of the lake. However, different regions of the lake show substantial variations, so further zoning and quantitative joint studies of influencing factors are required to more accurately understand the true mechanisms of algae in Lake Dianchi.

Phosphorus and Nitrogen Adsorption Capacities of Biochars Derived from Feedstocks at Different Pyrolysis Temperatures

This study investigates the P and NO3− adsorption capacities of different biochars made from plant waste including rice straw (RSB), Phragmites communis (PCB), sawdust (SDB), and egg shell (ESB) exposed to a range of pyrolysis temperatures (300, 500 and 700 °C). Results indicate that the effect of pyrolysis temperature on the physiochemical properties of biochar varied with feedstock material. Biochars derived from plant waste had limited adsorption or even released P and NO3−, but adsorption of P capacity could be improved by adjusting pyrolysis temperature. The maximum adsorption of P on RSB700, PCB300, and SDB300, produced at pyrolysis temperature of 700, 300 and 300 °C, was 5.41, 7.75 and 3.86 mg g−1, respectively. ESB can absorb both P and NO3−, and its adsorption capacity increased with an increase in pyrolysis temperature. The maximum NO3− and P adsorption for ESB700 was 1.43 and 6.08 mg g−1, respectively. The less negative charge and higher surface area of ESB enabled higher NO3− and P adsorption capacity. The P adsorption process on RSB, PCB, SDB and ESB, and the NO3− adsorption process on ESB were endothermic reactions. However, the NO3− adsorption process on RSB, PCB and SDB was exothermic. The study demonstrates that the use of egg shell biochar may be an effective way to remove, through adsorption, P and NO3− from wastewater.