Trophic diversity and carbon sources supporting fish communities along a pollution gradient in a tropical river

Fish acting as sinks of methane-derived carbon in Neotropical floodplains

Floodplains function as global hotspots for the natural production of methane. Some of this methane can be oxidized by methanotrophic bacteria and assimilated into their biomass before reaching the atmosphere. Consequently, aquatic invertebrates that feed on methanotrophic bacteria may transfer methane-derived carbon to higher trophic levels in the aquatic food chain. Our objective was to investigate the proportion of methane-derived carbon in the biomass of apex fish across 34 lakes from four major Neotropical floodplains (Amazon, Pantanal, Araguaia, and Paraná) using stable isotopes of carbon (δ13C). We found that methane-derived carbon contributed between 5 % and 16 % to the biomass of 37 apex fish species, providing, for the first time, evidence of the fish's role in the methane cycle in the Neotropics. Consumers in the Amazon and Pantanal floodplains, the largest and most significant regions for methane production, exhibited higher levels of methane-derived carbon in their biomass (11.06 ± 2.87 % and 9.84 ± 3.08 %, respectively). These results underscore the role of aquatic consumers in mitigating methane emissions in floodplains, as methane oxidation and assimilation are linked to reduced emissions. Therefore, conserving fish assemblages in floodplains through strategies that maintain the natural dynamics of these ecosystems is essential for controlling natural methane emissions.

Food web structure of fish communities of Doce River, 5 years after the Fundão dam failure

The rupture of the Fundão dam is considered the largest mining failure in history, which had a particularly detrimental impact on fish populations, as the mud from the ore tailings significantly altered the water quality and habitat of Doce River basin. This study aimed to assess the trophic structure of fish communities in areas impacted and not impacted by the dam rupture in the Doce River basin. To evaluate the food web structure, community-wide trophic niche, and trophic positions of fish, stable isotopes of carbon (δ13C) and nitrogen (δ15N) were utilized across ten sites (seven impacted and three control). In general, fish appeared to assimilate resources such as invertebrates, algae, and periphyton, although the importance of each resource varied among sites. The site closest to the dam rupture exhibited a more simplified trophic structure compared to the control sites and those nearer the river mouth. In this site, most fish species occupied a similar trophic position. Trophic niches also exhibited the greatest dissimilarity between the site closest to the dam failure and those farther away from it, with an expansion of trophic niche breadth observed with an increase in the distance from the dam rupture. Our study provided valuable insights into the trophic structure of fish communities within the Doce River basin, shedding light on the trophic ecology of the 59 fish species investigated. We also emphasize the importance of our study for future assessments of ore tailings dam failure disasters and evaluating the effectiveness of mitigation measures for Doce River basin recovery.

Anthropogenic nutrient loading affects both individual species and the trophic structure of river fish communities

Although the concept of trophic interactions has been used for a long time, there are still considerable gaps in our understanding of the effect of various environmental factors on trophic interactions within river fish assemblages. Carbon (δ13C) and nitrogen (δ15N) stable isotope ratios of 20 species of fish belonging to both eurytopic and rheophilic ecological groups from a large temperate rivers were used to evaluate overall trophic niche use and trophic position of species, and to find out how environmental variability associated with nutrient loading affects individual and community-wide aspects of trophic structure. The study was carried out at 11 sites along the European rivers Vltava and Elbe, representing a continuous gradient of pollution and habitat degradation. Corrected Standard Ellipse Area (SEAc) was significantly larger for the group of eurytopic ecological species than for rheophilic species. Despite narrower isotopic niche space, rheophilic fish species occupied a higher trophic position, suggesting that these species use resources more enriched in 15N. Of the 11 environmental variables tested, nutrients had a significant effect on trophic niche area of species (SEAc), indicating that eutrophication is of critical importance for fish assemblages. Isotopic niche area of species was found to be positively influenced by total phosphorus, and negatively affected by concentrations of nitrate (N-NO3−) and ammonia (N-NH4+). A negative association between oxygen demand and a measure of trophic diversity - mean distance to centroid (CD)- and a measure of density and clustering of species - mean nearest neighbor distance (MNND)- were found, indicating that the oxygen demand is a key factor influencing community trophic structure. An observed pattern where nutrient loading influenced both individual species and trophic structure of the fish assemblage provides strong support for an anthropogenic influence on riverine food webs.

Saltwater intrusion affecting NO2- accumulation in demersal fishery species by bacterially mediated N-cycling

To investigate the underlying effects of saltwater intrusion (SWI) on bottom aquatic ecosystems, a set of environmental parameters and the bacterial community were determined and analyzed by sampling bottom water and surface sediments at the Modaomen waterway of the Pearl River Estuary. Biodiversity of fishery species and their relationship with the environment variables were analyzed together. NO₃^- and NO₂^- concentration down-regulation and NH₄⁺ concentration up-regulation in water and sediment were observed along the resulting salinity gradient, indicating that SWI affected N-cycling. Further investigation via 16 s sequencing revealed that taxonomic and functional composition of the bacterial community in the sediment displayed greater discretization than in water, implying that SWI exerted a greater impact on the sedimentary bacterial community. Metagenomic sequencing showed that the sedimentary bacterial community was associated with NO₃^-, NO₂^-, and NH₄⁺ transformation under SWI, and that this was driven by salinity and conductivity. Nitrogen metabolism and denitrification related genes were expressed at higher levels in high salinity than in low salinity, consistent with the increased enzymatic activities of NiR and NR. The NO₂^- concentration in the muscle of six selected fishery species was significantly decreased by 11.15-65.74% (P < 0.05) along the salinity gradient, indicating that SWI reduced NO₂^- accumulation. The results suggest that SWI alleviates NO₂^- accumulation in demersal fishery species via bacterial mediation of N-cycling.

Forest cover controls the nitrogen and carbon stable isotopes of rivers

Deforestation affects the ecological integrity of rivers and streams, threatening biodiversity and ecosystem services worldwide. However, few studies have strictly analyzed the effect of the functional responses of tropical streams to changes in forest cover since deforested basins are usually also influenced by confounding anthropogenic inputs. Here we address tropical streams and test whether the stable isotopic ratios of nitrogen (N, δ¹⁵N) and carbon (C, δ¹³C) and the ratio of C:N of ecosystem components vary along a forest cover gradient. We also assess the ecological integrity of streams by in situ measurements using physical features commonly used in stream quality assessments. The results showed that the δ¹⁵N of most aquatic components, δ¹³C of particulate matter and omnivorous fish, and C:N of particulate matter and algae vary significantly with forest cover, indicating the role of terrestrial vegetation in regulating stream biogeochemistry. The dual stable isotope analysis satisfactorily indicated the changes in terrestrial-aquatic connections regarding both N and C cycles, thus showing the role of algae and particulate matter in influencing stream fauna through food web transfers. Our results support the use of stable isotopes to monitor watershed deforestation and highlight the need for reassessment of the effects of anthropogenic inputs on δ¹⁵N increase in globally distributed inland waters since the loss of forest is a significant cause in itself.

Nitrogen pollution promotes changes in the niche space of fish communities

Historically, anthropogenic fixed nitrogen has been purposely increased to benefit food production and global development. One consequence of this increase has been to raise concentrations of nitrogen in aquatic ecosystems. To evaluate whether nitrogen pollution promotes changes in the estimates of niche space of fish communities, we examined 16 sites along a Brazilian river basin highly impacted by anthropogenic activities, especially discharge of domestic and industrial sewage from a region with more than 5 million inhabitants. We analysed the carbon (δ¹³C) and nitrogen (δ¹⁵N) isotope ratios of fish species and both autochthonous (periphyton) and allochthonous (course and fine particulate organic matter) basal food resources. To estimate the magnitude of nitrogen pollution, we measured the nitrate and ammonium concentrations at each site. Sampling was conducted in the dry and wet seasons to evaluate the influence of seasonality. Nitrogen pollution generally increased estimates of niche space, and seasonality influenced only the niche estimates of fish communities from polluted sites. In addition, isotopic analyses of nitrogen polluted sites yielded unrealistic estimates of trophic positioning (detritivores at the top of the food web). We conclude that changes in niche space estimates reflect both alterations in baseline isotopic values and differential trophic behaviour among fishes. Our study suggests that under conditions of high pollution, other factors appear to influence isotopic estimates of niche, such as isotopically distinct sources that have not been sampled, and/or differences in δ¹⁵N turnover rates between fish tissue and basal resources, creating isotopic baselines that are challenging to interpret.