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Wang J, Cui X, Liang L, Li J, Pang B, Li J. Advances in DNA-based electrochemical biosensors for the detection of foodborne pathogenic bacteria. Talanta 2024; 275:126072. [PMID: 38615455 DOI: 10.1016/j.talanta.2024.126072] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2024] [Revised: 03/18/2024] [Accepted: 04/06/2024] [Indexed: 04/16/2024]
Abstract
The detection of foodborne pathogenic bacteria is critical in preventing foodborne diseases. DNA-based electrochemical biosensors, with the merits of high sensitivity and short detection time, provide an effective detecting method for foodborne pathogens, attracting significant interest for the past few years. This review mainly describes the important research progress of DNA-based electrochemical biosensors for the detection of foodborne pathogenic bacteria through four perspectives: representative foodborne pathogens detection using electrochemical approaches, DNA immobilization strategies of aptamers, DNA-based signal amplification strategies used in electrochemical DNA sensors, and functional DNA used in electrochemical DNA sensors. Finally, perspectives and challenges are presented in this field. This review will contribute to DNA-based electrochemical biosensor in enhancing the nucleic acid signal amplification.
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Affiliation(s)
- Jun Wang
- School of Public Health, Jilin University, Changchun, Jilin, 130021, China
| | - Xueting Cui
- School of Public Health, Jilin University, Changchun, Jilin, 130021, China
| | - Lanqian Liang
- School of Public Health, Jilin University, Changchun, Jilin, 130021, China
| | - Juan Li
- School of Public Health, Jilin University, Changchun, Jilin, 130021, China.
| | - Bo Pang
- School of Public Health, Jilin University, Changchun, Jilin, 130021, China.
| | - Jinhua Li
- School of Public Health, Jilin University, Changchun, Jilin, 130021, China.
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2
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Mansouri S, Alharbi Y, Alqahtani A. Nanomaterials Connected to Bioreceptors to Introduce Efficient Biosensing Strategy for Diagnosis of the TORCH Infections: A Critical Review. Crit Rev Anal Chem 2024:1-18. [PMID: 38193140 DOI: 10.1080/10408347.2023.2301649] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2024]
Abstract
TORCH infection is a significant risk factor for severe fetal damage, especially congenital malformations. Screening pregnant women for TORCH pathogens could reduce the incidence of adverse pregnancy outcomes and prevent birth defects. Hence, timely identification and inhibition of TORCH infections are effective ways to successfully prevent them in pregnant women. Recently, the superiority of biosensors in TORCH pathogen sensing has been emphasized due to their intrinsic benefits, such as rapid response time, portability, cost-effectiveness, much friendlier preparation and determination steps. With the introduction of advanced nanomaterials into biosensing, the diagnostic properties of biosensors have significantly improved. This study core presents and debates the current progress in biosensing systems for TORCH pathogens using various artificial and natural receptors. The incorporation of nanomaterials into various transduction systems can enhance diagnostic performance. The key performance characteristics of optical and electrochemical biosensors, such as response time, limit of detection (LOD), and linear detection range, are systematically discussed, along with the current TORCH pathogens used for constructing biosensors. Finally, the major problems that exist for converting scientific investigation into product development are also outlined.
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Affiliation(s)
- Sofiene Mansouri
- Department of Biomedical Technology, College of Applied Medical Sciences in Al-Kharj, Prince Sattam Bin Abdulaziz University, Al-Kharj, Saudi Arabia
- Laboratory of Biophysics and Medical Technologies, University of Tunis El Manar, Higher Institute of Medical Technologies of Tunis, Tunis, Tunisia
| | - Yousef Alharbi
- Department of Biomedical Technology, College of Applied Medical Sciences in Al-Kharj, Prince Sattam Bin Abdulaziz University, Al-Kharj, Saudi Arabia
| | - Abdulrahman Alqahtani
- Department of Biomedical Technology, College of Applied Medical Sciences in Al-Kharj, Prince Sattam Bin Abdulaziz University, Al-Kharj, Saudi Arabia
- Department of Medical Equipment Technology, College of Applied, Medical Science, Majmaah University, Majmaah City, Saudi Arabia
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3
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Toxoplasmosis diagnostic techniques: Current developed methods and biosensors. Talanta 2023; 252:123828. [DOI: 10.1016/j.talanta.2022.123828] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2022] [Revised: 08/03/2022] [Accepted: 08/07/2022] [Indexed: 11/22/2022]
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4
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Recent advances on the piezoelectric, electrochemical, and optical biosensors for the detection of protozoan pathogens. Trends Analyt Chem 2022. [DOI: 10.1016/j.trac.2022.116803] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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Gattani A, Mandal S, Khan M, Jain A, Jesse D, Mishra A, Tiwari S. Novel electrochemical biosensing for detection of neglected tropical parasites of animal origin: Recent advances. ELECTROANAL 2022. [DOI: 10.1002/elan.202200255] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Anil Gattani
- Nanaji Deshmukh Veterinary Science University INDIA
| | - Sanju Mandal
- Nanaji Deshmukh Veterinary Science University INDIA
| | - Mahvash Khan
- Nanaji Deshmukh Veterinary Science University INDIA
| | - Anand Jain
- Nanaji Deshmukh Veterinary Science University INDIA
| | | | | | - Sita Tiwari
- Nanaji Deshmukh Veterinary Science University INDIA
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The first diagnostic test for specific detection of Mycobacterium simiae using an electrochemical label-free DNA nanobiosensor. Talanta 2022; 238:123049. [PMID: 34801906 DOI: 10.1016/j.talanta.2021.123049] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2021] [Revised: 10/06/2021] [Accepted: 11/06/2021] [Indexed: 01/08/2023]
Abstract
Mycobacterium simiae has been reported to be the most prevalent species of Nontuberculous mycobacteria (NTM) in many countries. As both phenotypic and molecular detection of M. simiae and other NTMs have limitations, finding an accurate, fast, and low-cost diagnostic method is critical for the management of infections. Here, we report the development of a new type of label-free electrochemical biosensor using a gold electrode decorated with l-cysteine/PAMAM dendrimer for specific targeting of M. simiae ITS sequence. DNA hybridization was monitored by measuring changes in the free guanine electrical signal with changing ssDNA target concentrations by differential pulse voltammetry (DPV) method. Response surface methodology (RSM) was applied for the optimization of variables affecting biosensor response. Under optimal conditions, the biosensor revealed a wide linear range from 10-14 M to 10-6 M and a detection limit of 1.40 fM. The fabricated biosensor showed an excellent selectivity to M. simiae in the presence of other similar pathogenic bacteria. Moreover, experimental results confirmed that this biosensor exhibited great precision and high reproducibility, hence provides a low-cost, label-free, and faster detection analysis, representing a novel strategy in detecting other NTMs.
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Modeling of ultrasensitive DNA hybridization detection based on gold nanoparticles/carbon-nanotubes/chitosan-modified electrodes. Colloids Surf A Physicochem Eng Asp 2020. [DOI: 10.1016/j.colsurfa.2019.124219] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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Eksin E, Polat D, Erdem A. Voltammetric and Impedimetric Detection of Interaction Between Dacarbazine and Nucleic Acids. ELECTROANAL 2019. [DOI: 10.1002/elan.201900284] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Ece Eksin
- Faculty of PharmacyAnalytical Chemistry Department
- Biotechnology Department, Graduate School of Natural and Applied SciencesEge University Bornova, Izmir 35100 Turkey
| | - Derya Polat
- Faculty of PharmacyAnalytical Chemistry Department
- Biotechnology Department, Graduate School of Natural and Applied SciencesEge University Bornova, Izmir 35100 Turkey
| | - Arzum Erdem
- Faculty of PharmacyAnalytical Chemistry Department
- Biotechnology Department, Graduate School of Natural and Applied SciencesEge University Bornova, Izmir 35100 Turkey
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Alves LM, Barros HLS, Flauzino JMR, Guedes PHG, Pereira JM, Fujiwara RT, Mineo TWP, Mineo JR, de Oliveira RJ, Madurro JM, G Brito-Madurro A. A novel peptide-based sensor platform for detection of anti-Toxoplasma gondii immunoglobulins. J Pharm Biomed Anal 2019; 175:112778. [PMID: 31352171 DOI: 10.1016/j.jpba.2019.112778] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2019] [Revised: 06/02/2019] [Accepted: 07/16/2019] [Indexed: 12/11/2022]
Abstract
Toxoplasma gondii is an intracellular protozoan parasite responsible for toxoplasmosis, which affects humans and animals. Serologic detection of anti-T. gondii immunoglobulins plays a crucial role in the clinical diagnosis of toxoplasmosis. In this work, a novel electrochemical immunosensor for detecting anti-T. gondii immunoglobulins is reported, based on immobilization of an in silico predicted peptide (PepB3), obtained from membrane protein of T. gondii, on the graphite electrode modified with poly(3-hydroxybenzoic acid). Indirect ELISA confirmed infection and binding specificity of peptide PepB3. Molecular modelling and simulations show this peptide binds to the T. gondii human Fab antibody in the surface antigen 1 (SAG1) binding site, remaining a stable complex during the molecular dynamic simulations, especially by hydrogen bonds and hydrophobic interactions. This electrochemical immunosensor was able to discriminate different periods of infection, using infected mouse serum samples, showing selectivity and discriminating infected and uninfected mouse serum.
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Affiliation(s)
- Lívia M Alves
- Institute of Biotechnology, Federal University of Uberlândia, Uberlândia, Brazil
| | - Heber L S Barros
- Institute of Biomedical Sciences, Federal University of Uberlândia, Uberlândia, Brazil
| | - José M R Flauzino
- Institute of Biotechnology, Federal University of Uberlândia, Uberlândia, Brazil
| | - Pedro H G Guedes
- Institute of Biotechnology, Federal University of Uberlândia, Uberlândia, Brazil
| | - Janser M Pereira
- Faculty of Mathematics, Federal University of Uberlândia, Uberlândia, Brazil
| | - Ricardo T Fujiwara
- Institute of Biological Sciences, Federal University of Minas Gerais, Belo Horizonte, Brazil
| | - Tiago W P Mineo
- Institute of Biomedical Sciences, Federal University of Uberlândia, Uberlândia, Brazil
| | - José R Mineo
- Institute of Biomedical Sciences, Federal University of Uberlândia, Uberlândia, Brazil
| | - Ronaldo J de Oliveira
- Institute of Exact, Natural Sciences and Education, Federal University of Triângulo Mineiro, Uberaba, Brazil
| | - João M Madurro
- Institute of Chemistry, Federal University of Uberlândia, Uberlândia, Brazil
| | - Ana G Brito-Madurro
- Institute of Biotechnology, Federal University of Uberlândia, Uberlândia, Brazil.
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Alizadeh Zeinabad H, Ghourchian H, Falahati M, Fathipour M, Azizi M, Boutorabi SM. Ultrasensitive interdigitated capacitance immunosensor using gold nanoparticles. NANOTECHNOLOGY 2018; 29:265102. [PMID: 29629877 DOI: 10.1088/1361-6528/aabca3] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Immunosensors based on interdigitated electrodes (IDEs), have recently demonstrated significant improvements in the sensitivity of capacitance detection. Herein, a novel type of highly sensitive, compact and portable immunosensor based on a gold interdigital capacitor has been designed and developed for the rapid detection of hepatitis B surface antigen (HBsAg). To improve the efficiency of antibody immobilization and time-saving, a self-assembled monolayer (SAM) of 2-mercaptoethylamine film was coated on IDEs. Afterwards, carboxyl groups on primary antibodies were activated through 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide and were immobilized on amino-terminated SAM for better control of the oriented immobilization of antibodies on gold IDEs. In addition, gold nanoparticles conjugated with a secondary antibody were used to enhance the sensitivity. Under optimal conditions, the immunosensor exhibited the sensitivity of 0.22 nF.pg ml-1, the linear range from 5 pg ml-1 to 1 ng ml-1 and the detection limit of 1.34 pg ml-1, at a signal-to-noise ratio of 3.
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Affiliation(s)
- Hojjat Alizadeh Zeinabad
- Laboratory of Bioanalysis, Institute of Biochemistry and Biophysics, University of Tehran, Tehran, Iran. MEMS & NEMS Lab, Department of Electrical and Computer Engineering, University of Tehran, Tehran, Iran. Department of Nanotechnology, Faculty of Advance Science and Technology, Pharmaceutical Sciences Branch, Islamic Azad University, Tehran, Iran
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11
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Unal DN, Eksin E, Erdem A. Electrochemical Determination of 6-Thioguanine and Its Interaction with DNA Oligonucleotides Using Disposable Graphite Pencil Electrodes. ANAL LETT 2017. [DOI: 10.1080/00032719.2017.1338714] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Didem Nur Unal
- Faculty of Pharmacy, Analytical Chemistry Department, Ege University, Izmir, Turkey
| | - Ece Eksin
- Faculty of Pharmacy, Analytical Chemistry Department, Ege University, Izmir, Turkey
| | - Arzum Erdem
- Faculty of Pharmacy, Analytical Chemistry Department, Ege University, Izmir, Turkey
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12
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Alves LM, Rodovalho VR, Castro AC, Freitas MA, Mota CM, Mineo TW, Mineo JR, Madurro JM, Brito-Madurro AG. Development of direct assays for Toxoplasma gondii and its use in genomic DNA sample. J Pharm Biomed Anal 2017; 145:838-844. [DOI: 10.1016/j.jpba.2017.07.050] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2017] [Revised: 07/19/2017] [Accepted: 07/30/2017] [Indexed: 01/28/2023]
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13
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Ozkan-Ariksoysal D, Kayran YU, Yilmaz FF, Ciucu AA, David IG, David V, Hosgor-Limoncu M, Ozsoz M. DNA-wrapped multi-walled carbon nanotube modified electrochemical biosensor for the detection of Escherichia coli from real samples. Talanta 2017; 166:27-35. [PMID: 28213234 DOI: 10.1016/j.talanta.2017.01.005] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2016] [Revised: 12/30/2016] [Accepted: 01/03/2017] [Indexed: 12/16/2022]
Abstract
This paper introduces DNA-wrapped multi-walled carbon nanotube (MWCNT)-modified genosensor for the detection of Escherichia coli (E. coli) from polymerase chain reaction (PCR)-amplified real samples while Staphylococcus aureus (S. aureus) was used to investigate the selectivity of the biosensor. The capture probe specifically recognizing E. coli DNA and it was firstly interacted with MWCNTs for wrapping of single-stranded DNA (ssDNA) onto the nanomaterial. DNA-wrapped MWCNTs were then immobilised on the surface of disposable pencil graphite electrode (PGE) for the detection of DNA hybridization. Electrochemical behaviors of the modified PGEs were investigated using Raman spectroscopy and differential pulse voltammetry (DPV). The sequence selective DNA hybridization was determined and evaluated by changes in the intrinsic guanine oxidation signal at about 1.0V by DPV. Numerous factors affecting the hybridization were optimized such as target concentration, hybridization time, etc. The designed DNA sensor can well detect E. coli DNA in 20min detection time with 0.5pmole of detection limit in 30µL of sample volume.
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Affiliation(s)
- Dilsat Ozkan-Ariksoysal
- Department of Analytical Chemistry, Faculty of Pharmacy, Ege University, 35100 Bornova, Izmir, Turkey.
| | - Yasin Ugur Kayran
- Department of Analytical Chemistry, Faculty of Pharmacy, Ege University, 35100 Bornova, Izmir, Turkey
| | - Fethiye Ferda Yilmaz
- Department of Pharmaceutical Microbiology, Faculty of Pharmacy, Ege University, 35100 Bornova, Izmir, Turkey
| | - Anton Alexandru Ciucu
- Department of Analytical Chemistry, Faculty of Chemistry, University of Bucharest, 90-92 Panduri Avenue, District 5, 050663 Bucharest, Romania
| | - Iulia Gabriela David
- Department of Analytical Chemistry, Faculty of Chemistry, University of Bucharest, 90-92 Panduri Avenue, District 5, 050663 Bucharest, Romania
| | - Vasile David
- Department of Analytical Chemistry, Faculty of Chemistry, University of Bucharest, 90-92 Panduri Avenue, District 5, 050663 Bucharest, Romania
| | - Mine Hosgor-Limoncu
- Department of Pharmaceutical Microbiology, Faculty of Pharmacy, Ege University, 35100 Bornova, Izmir, Turkey
| | - Mehmet Ozsoz
- Department of Analytical Chemistry, Faculty of Pharmacy, Ege University, 35100 Bornova, Izmir, Turkey
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Vizzini P, Iacumin L, Comi G, Manzano M. Development and application of DNA molecular probes. AIMS BIOENGINEERING 2017. [DOI: 10.3934/bioeng.2017.1.113] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
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