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Lu K, Wang F, Chen L, Zhang W. Overexpression of S-R enhances the accumulation of biomass, fatty acids, and β-carotene in Schizochytrium. BIORESOURCE TECHNOLOGY 2023; 385:129452. [PMID: 37406830 DOI: 10.1016/j.biortech.2023.129452] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2023] [Revised: 06/30/2023] [Accepted: 07/01/2023] [Indexed: 07/07/2023]
Abstract
Strategies for enhancing biomass accumulation and increasing the production of fatty acids and β-carotene in Schizochytrium are hindered by the lack of suitable targets. In this study, S-R, a RING (really interesting new gene) finger domain-containing protein, was identified in Schizochytrium, with homologs found in the family Thraustochytriaceae. Transgenic strains overexpressing S-R showed a minor improvement in cell growth but a significant increase in total fatty acids content by 1.29- to 1.36-fold. Almost all individual saturated fatty acids exhibited significant increases, with the greatest increase observed in the C14:0 content, by 1.52- to 1.78-fold. Additionally, the β-carotene content of S-R strains was significantly upregulated. Overexpression of s-r conferred hypersaline tolerance in Schizochytrium, with a significant increase in dry cell weight, total fatty acids and β-carotene, likely due to the upregulation of glycerol and proline. This study provides a feasible strategy to engineer Thraustochytriaceae for efficient biomass and biochemical production.
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Affiliation(s)
- Kongyong Lu
- Laboratory of Synthetic Microbiology, School of Chemical Engineering and Technology, Tianjin University, Tianjin, PR China; Frontier Science Center of Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, PR China
| | - Fangzhong Wang
- Laboratory of Synthetic Microbiology, School of Chemical Engineering and Technology, Tianjin University, Tianjin, PR China; Frontier Science Center of Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, PR China; Center for Biosafety Research and Strategy, Tianjin University, Tianjin, PR China
| | - Lei Chen
- Laboratory of Synthetic Microbiology, School of Chemical Engineering and Technology, Tianjin University, Tianjin, PR China; Frontier Science Center of Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, PR China.
| | - Weiwen Zhang
- Laboratory of Synthetic Microbiology, School of Chemical Engineering and Technology, Tianjin University, Tianjin, PR China; Frontier Science Center of Synthetic Biology and Key Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, PR China; Center for Biosafety Research and Strategy, Tianjin University, Tianjin, PR China
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Requena-Ramírez MD, Rodríguez-Suárez C, Ávila CM, Palomino C, Hornero-Méndez D, Atienza SG. Bread Wheat Biofortification for Grain Carotenoid Content by Inter-Specific Breeding. Foods 2023; 12:foods12071365. [PMID: 37048186 PMCID: PMC10092970 DOI: 10.3390/foods12071365] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Revised: 03/14/2023] [Accepted: 03/21/2023] [Indexed: 04/14/2023] Open
Abstract
Bread wheat has traditionally been selected for whitish derived flours. As a consequence, the current varieties carry carotenogenic alleles associated with low grain carotenoid. In contrast, high grain yellow pigment content (YPC) has been a major target in durum wheat programs since yellow colour is an important aesthetic factor for pasta production. Phytoene synthase 1 (Psy1) genes have an important role in the determination of the carotenoid content in wheat. In this work, we have transferred the genes Psy1-A1 and Psy1-B1 from durum to bread wheat by inter-specific hybridization in order to evaluate the combined effect of these genes for the improvement of grain carotenoid content, as well as the development of carotenoid-enriched bread wheat lines. Inter-specific breeding coupled with a MAS approach based on Psy1-A1 and Psy1-B1 alleles has allowed the development of bread wheat pre-breeding lines with enhanced grain carotenoid content (16-23% mean). These biofortified lines have the potential to become new varieties or to be used as recurrent parents in bread wheat breeding programs.
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Affiliation(s)
| | | | - Carmen M Ávila
- Área Mejora y Biotecnología, IFAPA-Centro Alameda del Obispo, Apdo. 3092, E-14080 Córdoba, Spain
| | - Carmen Palomino
- Instituto de Agricultura Sostenible (CSIC), Alameda del Obispo, s/n, E-14004 Córdoba, Spain
| | - Dámaso Hornero-Méndez
- Department of Food Phytochemistry, Instituto de la Grasa (CSIC), Campus Universidad Pablo de Olavide, Edificio 46, Ctra de Utrera, Km 1, E-41013 Sevilla, Spain
| | - Sergio G Atienza
- Instituto de Agricultura Sostenible (CSIC), Alameda del Obispo, s/n, E-14004 Córdoba, Spain
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Hattan JI, Furubayashi M, Maoka T, Takemura M, Misawa N. Reconstruction of the Native Biosynthetic System of Carotenoids in E. coli─Biosynthesis of a Series of Carotenoids Specific to Paprika Fruit. ACS Synth Biol 2023; 12:1072-1080. [PMID: 36943278 DOI: 10.1021/acssynbio.2c00578] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/23/2023]
Abstract
Capsanthin, capsorubin, cucurbitaxanthin A, and capsanthin 3,6-epoxide, a series of carotenoids specific to the red fruit of paprika (Capsicum annuum), were produced in pathway-engineered Escherichia coli cells. These cells functionally expressed multiple genes for eight carotenogenic enzymes, two of which, paprika capsanthin/capsorubin synthase (CaCCS) and zeaxanthin epoxidase (CaZEP), were designed to be located adjacently. The biosynthesis of these carotenoids, except for capsanthin, was the first successful attempt in E. coli. In a previous study, the levels of capsanthin synthesized were low despite the high expression of the CaCCS gene, which may have been due to the dual activity of CaCCS as a lycopene β-cyclase and CCS. An enhanced interaction between CaCCS and CaZEP that supplies antheraxanthin and violaxanthin, substrates for CaCCS, was considered to be crucial for an efficient reaction. To achieve this, we adapted S·tag and S-protein binding. The S·tag Thrombin Purification Kit (Novagen) is merchandized for in vitro affinity purification, and S·tag-fused proteins in the E. coli lysate are specifically trapped by S-proteins fixed on the agarose carrier. Furthermore, S-proteins have been reported to oligomerize via C-terminal swapping. In the present study, CaCCS and CaZEP were individually fused to the S·tag and designed to interact on oligomerized S-protein scaffolds in E. coli, which led to the biosynthesis of not only capsanthin and capsorubin but also cucurbitaxanthin A and capsanthin 3,6-epoxide. The latter reaction by CaCCS was assigned for the first time. This approach reinforces the scaffold's importance for multienzyme pathways when native biosynthetic systems are reconstructed in microorganisms.
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Affiliation(s)
- Jun-Ichiro Hattan
- Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, 1-308 Suematsu, Nonoichi-shi 921-8836, Ishikawa, Japan
| | - Maiko Furubayashi
- National Institute of Advanced Industrial Science and Technology, 2-17-2-1 Tsukisamu-Higashi, Toyohira-ku, Sapporo 062-8517, Hokkaido, Japan
| | - Takashi Maoka
- Research Institute for Production Development, Division of Food Function and Chemistry, 15 Shimogamo-morimoto, Sakyo-ku, Kyoto 606-0858, Japan
| | - Miho Takemura
- Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, 1-308 Suematsu, Nonoichi-shi 921-8836, Ishikawa, Japan
| | - Norihiko Misawa
- Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, 1-308 Suematsu, Nonoichi-shi 921-8836, Ishikawa, Japan
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Niaz M, Zhang B, Zhang Y, Yan X, Yuan M, Cheng Y, Lv G, Fadlalla T, Zhao L, Sun C, Chen F. Genetic and molecular basis of carotenoid metabolism in cereals. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2023; 136:63. [PMID: 36939900 DOI: 10.1007/s00122-023-04336-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2022] [Accepted: 02/28/2023] [Indexed: 06/18/2023]
Abstract
Carotenoids are vital pigments for higher plants and play a crucial function in photosynthesis and photoprotection. Carotenoids are precursors of vitamin A synthesis and contribute to human nutrition and health. However, cereal grain endosperm contains a minor carotenoid measure and a scarce supply of provitamin A content. Therefore, improving the carotenoids in cereal grain is of major importance. Carotenoid content is governed by multiple candidate genes with their additive effects. Studies on genes related to carotenoid metabolism in cereals would increase the knowledge of potential metabolic steps of carotenoids and enhance the quality of crop plants. Recognizing the metabolism and carotenoid accumulation in various staple cereal crops over the last few decades has broadened our perspective on the interdisciplinary regulation of carotenogenesis. Meanwhile, the amelioration in metabolic engineering approaches has been exploited to step up the level of carotenoid and valuable industrial metabolites in many crops, but wheat is still considerable in this matter. In this study, we present a comprehensive overview of the consequences of biosynthetic and catabolic genes on carotenoid biosynthesis, current improvements in regulatory disciplines of carotenogenesis, and metabolic engineering of carotenoids. A panoptic and deeper understanding of the regulatory mechanisms of carotenoid metabolism and genetic manipulation (genome selection and gene editing) will be useful in improving the carotenoid content of cereals.
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Affiliation(s)
- Mohsin Niaz
- National Key Laboratory of Wheat and Maize Crop Science / CIMMYT-China Wheat and Maize Joint Research Center /Agronomy College, Henan Agricultural University, 15 Longzihu College District, Zhengzhou, 450046, China
| | - Bingyang Zhang
- National Key Laboratory of Wheat and Maize Crop Science / CIMMYT-China Wheat and Maize Joint Research Center /Agronomy College, Henan Agricultural University, 15 Longzihu College District, Zhengzhou, 450046, China
| | - Yixiao Zhang
- National Key Laboratory of Wheat and Maize Crop Science / CIMMYT-China Wheat and Maize Joint Research Center /Agronomy College, Henan Agricultural University, 15 Longzihu College District, Zhengzhou, 450046, China
| | - Xiangning Yan
- National Key Laboratory of Wheat and Maize Crop Science / CIMMYT-China Wheat and Maize Joint Research Center /Agronomy College, Henan Agricultural University, 15 Longzihu College District, Zhengzhou, 450046, China
| | - Minjie Yuan
- National Key Laboratory of Wheat and Maize Crop Science / CIMMYT-China Wheat and Maize Joint Research Center /Agronomy College, Henan Agricultural University, 15 Longzihu College District, Zhengzhou, 450046, China
| | - YongZhen Cheng
- National Key Laboratory of Wheat and Maize Crop Science / CIMMYT-China Wheat and Maize Joint Research Center /Agronomy College, Henan Agricultural University, 15 Longzihu College District, Zhengzhou, 450046, China
| | - Guoguo Lv
- National Key Laboratory of Wheat and Maize Crop Science / CIMMYT-China Wheat and Maize Joint Research Center /Agronomy College, Henan Agricultural University, 15 Longzihu College District, Zhengzhou, 450046, China
| | - Tarig Fadlalla
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China
- Faculty of Agriculture, Nile valley University, Atbara, 346, Sudan
| | - Lei Zhao
- National Key Laboratory of Wheat and Maize Crop Science / CIMMYT-China Wheat and Maize Joint Research Center /Agronomy College, Henan Agricultural University, 15 Longzihu College District, Zhengzhou, 450046, China
| | - Congwei Sun
- National Key Laboratory of Wheat and Maize Crop Science / CIMMYT-China Wheat and Maize Joint Research Center /Agronomy College, Henan Agricultural University, 15 Longzihu College District, Zhengzhou, 450046, China
| | - Feng Chen
- National Key Laboratory of Wheat and Maize Crop Science / CIMMYT-China Wheat and Maize Joint Research Center /Agronomy College, Henan Agricultural University, 15 Longzihu College District, Zhengzhou, 450046, China.
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5
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Xiao S, Dai X, Zhao L, Zhou Z, Zhao L, Xu P, Gao B, Zhang A, Zhao D, Yuan R, Wang Y, Wang J, Li Q, Cao Q. Resequencing of sweetpotato germplasm resources reveals key loci associated with multiple agronomic traits. HORTICULTURE RESEARCH 2022; 10:uhac234. [PMID: 36643760 PMCID: PMC9832839 DOI: 10.1093/hr/uhac234] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/25/2022] [Accepted: 10/13/2022] [Indexed: 06/17/2023]
Abstract
Sweetpotato is an important crop that exhibits hexaploidy and high heterozygosity, which limits gene mining for important agronomic traits. Here, 314 sweetpotato germplasm resources were deeply resequenced, and 4 599 509 SNPs and 846 654 InDels were generated, among which 196 124 SNPs were nonsynonymous and 9690 InDels were frameshifted. Based on the Indels, genome-wide marker primers were designed, and 3219 of 40 366 primer pairs were selected to construct the core InDel marker set. The molecular ID of 104 sweetpotato samples verified the availability of these primers. The sweetpotato population structures were then assessed through multiple approaches using SNPs, and diverse approaches demonstrated that population stratification was not obvious for most Chinese germplasm resources. As many as 20 important agronomic traits were evaluated, and a genome-wide association study was conducted on these traits. A total of 19 high-confidence loci were detected in both models. These loci included several candidate genes, such as IbMYB1, IbZEP1, and IbYABBY1, which might be involved in anthocyanin metabolism, carotenoid metabolism, and leaf morphogenesis, respectively. Among them, IbZEP1 and IbYABBY1 were first reported in sweetpotato. The variants in the promoter and the expression levels of IbZEP1 were significantly correlated with flesh color (orange or not orange) in sweetpotato. The expression levels of IbYABBY1 were also correlated with leaf shape. These results will assist in genetic and breeding studies in sweetpotato.
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Affiliation(s)
| | | | | | - Zhilin Zhou
- Jiangsu Xuzhou Sweetpotato Research Center/Sweetpotato Research Institute, Chinese Agricultural Academy of Sciences, Xuzhou 221131, China
| | - Lukuan Zhao
- Jiangsu Xuzhou Sweetpotato Research Center/Sweetpotato Research Institute, Chinese Agricultural Academy of Sciences, Xuzhou 221131, China
| | - Pan Xu
- College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730020, China
| | - Bingqian Gao
- Jiangsu Xuzhou Sweetpotato Research Center/Sweetpotato Research Institute, Chinese Agricultural Academy of Sciences, Xuzhou 221131, China
| | - An Zhang
- Jiangsu Xuzhou Sweetpotato Research Center/Sweetpotato Research Institute, Chinese Agricultural Academy of Sciences, Xuzhou 221131, China
| | - Donglan Zhao
- Jiangsu Xuzhou Sweetpotato Research Center/Sweetpotato Research Institute, Chinese Agricultural Academy of Sciences, Xuzhou 221131, China
| | - Rui Yuan
- Jiangsu Xuzhou Sweetpotato Research Center/Sweetpotato Research Institute, Chinese Agricultural Academy of Sciences, Xuzhou 221131, China
| | - Yao Wang
- Jiangsu Xuzhou Sweetpotato Research Center/Sweetpotato Research Institute, Chinese Agricultural Academy of Sciences, Xuzhou 221131, China
| | - Jie Wang
- Jiangsu Xuzhou Sweetpotato Research Center/Sweetpotato Research Institute, Chinese Agricultural Academy of Sciences, Xuzhou 221131, China
| | - Qinglian Li
- Jiangsu Xuzhou Sweetpotato Research Center/Sweetpotato Research Institute, Chinese Agricultural Academy of Sciences, Xuzhou 221131, China
| | - Qinghe Cao
- Correspondence: Qinghe Cao (); Tel.: 086-0516-82189205; Fax: 086-0516-82189205
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7
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Integration of transcriptomic and metabolomic data reveals new tetraploid kiwifruit hybrids with enhanced nutrients. Lebensm Wiss Technol 2022. [DOI: 10.1016/j.lwt.2022.114012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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8
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Requena-Ramírez MD, Rodríguez-Suárez C, Flores F, Hornero-Méndez D, Atienza SG. Marker-Trait Associations for Total Carotenoid Content and Individual Carotenoids in Durum Wheat Identified by Genome-Wide Association Analysis. PLANTS 2022; 11:plants11152065. [PMID: 35956543 PMCID: PMC9370666 DOI: 10.3390/plants11152065] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/20/2022] [Revised: 08/04/2022] [Accepted: 08/05/2022] [Indexed: 12/02/2022]
Abstract
Yellow pigment content is one of the main traits considered for grain quality in durum wheat (Triticum turgidum L.). The yellow color is mostly determined by carotenoid pigments, lutein being the most abundant in wheat endosperm, although zeaxanthin, α-carotene and β-carotene are present in minor quantities. Due to the importance of carotenoids in human health and grain quality, modifying the carotenoid content and profile has been a classic target. Landraces are then a potential source for the variability needed for wheat breeding. In this work, 158 accessions of the Spanish durum wheat collection were characterized for carotenoid content and profile and genotyped using the DArTSeq platform for association analysis. A total of 28 marker-trait associations were identified and their co-location with previously described QTLs and candidate genes was studied. The results obtained confirm the importance of the widely described QTL in 7B and validate the QTL regions recently identified by haplotype analysis for the semolina pigment. Additionally, copies of the Zds and Psy genes on chromosomes 7B and 5B, respectively, may have a putative role in determining zeaxanthin content. Finally, genes for the methylerythritol 4-phosphate (MEP) and isopentenyl diphosphate (IPPI) carotenoid precursor pathways were revealed as additional sources of untapped variation for carotenoid improvement.
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Affiliation(s)
| | | | - Fernando Flores
- Departamento de Ciencias Agroforestales, E.T.S.I. Campus El Carmen, Universidad de Huelva, Avda. Fuerzas Armadas, S/N, 21007 Huelva, Spain
| | - Dámaso Hornero-Méndez
- Departamento de Fitoquímica de los Alimentos, Instituto de la Grasa (CSIC), Campus Universidad Pablo de Olavide, Edificio 46, Ctra de Utrera, Km 1, 41013 Sevilla, Spain
| | - Sergio G. Atienza
- Instituto de Agricultura Sostenible (CSIC), Alameda del Obispo, S/N, 14004 Córdoba, Spain
- Correspondence:
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Yuan B, Yuan C, Wang Y, Liu X, Qi G, Wang Y, Dong L, Zhao H, Li Y, Dong Y. Identification of genetic loci conferring seed coat color based on a high-density map in soybean. FRONTIERS IN PLANT SCIENCE 2022; 13:968618. [PMID: 35979081 PMCID: PMC9376438 DOI: 10.3389/fpls.2022.968618] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Accepted: 07/11/2022] [Indexed: 05/26/2023]
Abstract
Seed coat color is a typical evolutionary trait. Identification of the genetic loci that control seed coat color during the domestication of wild soybean could clarify the genetic variations between cultivated and wild soybean. We used 276 F10 recombinant inbred lines (RILs) from the cross between a cultivated soybean (JY47) and a wild soybean (ZYD00321) as the materials to identify the quantitative trait loci (QTLs) for seed coat color. We constructed a high-density genetic map using re-sequencing technology. The average distance between adjacent markers was 0.31 cM on this map, comprising 9,083 bin markers. We identified two stable QTLs (qSC08 and qSC11) for seed coat color using this map, which, respectively, explained 21.933 and 26.934% of the phenotypic variation. Two candidate genes (CHS3C and CHS4A) in qSC08 were identified according to the parental re-sequencing data and gene function annotations. Five genes (LOC100786658, LOC100801691, LOC100806824, LOC100795475, and LOC100787559) were predicted in the novel QTL qSC11, which, according to gene function annotations, might control seed coat color. This result could facilitate the identification of beneficial genes from wild soybean and provide useful information to clarify the genetic variations for seed coat color in cultivated and wild soybean.
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Affiliation(s)
- Baoqi Yuan
- College of Agronomy, Jilin Agricultural University, Changchun, China
- Soybean Research Institute, Jilin Academy of Agricultural Sciences, National Engineering Research Center for Soybean, Changchun, China
| | - Cuiping Yuan
- Soybean Research Institute, Jilin Academy of Agricultural Sciences, National Engineering Research Center for Soybean, Changchun, China
| | - Yumin Wang
- Soybean Research Institute, Jilin Academy of Agricultural Sciences, National Engineering Research Center for Soybean, Changchun, China
| | - Xiaodong Liu
- Crop Germplasm Institute, Jilin Academy of Agricultural Sciences, Changchun, China
| | - Guangxun Qi
- Soybean Research Institute, Jilin Academy of Agricultural Sciences, National Engineering Research Center for Soybean, Changchun, China
| | - Yingnan Wang
- Soybean Research Institute, Jilin Academy of Agricultural Sciences, National Engineering Research Center for Soybean, Changchun, China
| | - Lingchao Dong
- Soybean Research Institute, Jilin Academy of Agricultural Sciences, National Engineering Research Center for Soybean, Changchun, China
| | - Hongkun Zhao
- Soybean Research Institute, Jilin Academy of Agricultural Sciences, National Engineering Research Center for Soybean, Changchun, China
| | - Yuqiu Li
- Soybean Research Institute, Jilin Academy of Agricultural Sciences, National Engineering Research Center for Soybean, Changchun, China
| | - Yingshan Dong
- College of Agronomy, Jilin Agricultural University, Changchun, China
- Soybean Research Institute, Jilin Academy of Agricultural Sciences, National Engineering Research Center for Soybean, Changchun, China
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10
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Does Plant Breeding for Antioxidant-Rich Foods Have an Impact on Human Health? Antioxidants (Basel) 2022; 11:antiox11040794. [PMID: 35453479 PMCID: PMC9024522 DOI: 10.3390/antiox11040794] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2022] [Revised: 04/04/2022] [Accepted: 04/12/2022] [Indexed: 02/07/2023] Open
Abstract
Given the general beneficial effects of antioxidants-rich foods on human health and disease prevention, there is a continuous interest in plant secondary metabolites conferring attractive colors to fruits and grains and responsible, together with others, for nutraceutical properties. Cereals and Solanaceae are important components of the human diet, thus, they are the main targets for functional food development by exploitation of genetic resources and metabolic engineering. In this review, we focus on the impact of antioxidants-rich cereal and Solanaceae derived foods on human health by analyzing natural biodiversity and biotechnological strategies aiming at increasing the antioxidant level of grains and fruits, the impact of agronomic practices and food processing on antioxidant properties combined with a focus on the current state of pre-clinical and clinical studies. Despite the strong evidence in in vitro and animal studies supporting the beneficial effects of antioxidants-rich diets in preventing diseases, clinical studies are still not sufficient to prove the impact of antioxidant rich cereal and Solanaceae derived foods on human
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Wang Y, Chen L, Yang Q, Hu Z, Guo P, Xie Q, Chen G. New insight into the pigment composition and molecular mechanism of flower coloration in tulip (Tulipa gesneriana L.) cultivars with various petal colors. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2022; 317:111193. [PMID: 35193742 DOI: 10.1016/j.plantsci.2022.111193] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2021] [Revised: 01/16/2022] [Accepted: 01/17/2022] [Indexed: 06/14/2023]
Abstract
Pigmentation of various components leads to different colors in tulip flowers. To understand the molecular basis of the petal coloration in tulip, integrative analyses of the pigment components and transcriptome profiles were conducted on four tulip cultivars with different petal colors. A total of four major anthocyanins and 46 carotenoids were identified. The anthocyanin cyanidin 3-O-galactoside showed markedly higher abundances in the B cultivar than in the other varieties, and among the 46 kinds of carotenoids, (E/Z)-phytoene, violaxanthin myristate and violaxanthin palmitate were the major components. The RNA-seq and qRT-PCR results indicated that the pigment accumulation was linked to the expression of genes involved in the anthocyanin and carotenoid biosynthesis pathways. Yeast two-hybrid (Y2H) assays showed the interaction between different regulator factors in tulip MYB-bHLH-WD40 (MBW) complexes. Co-expression analyses of genes were performed, which include anthocyanin and carotenoid biosynthesis genes and transcription factors involved in MYB, bHLH, WRKY, AUX-IAA and MADS-box. The co-expression network and related analysis provide a basis for the discovery of color regulatory factors. Taken together, our study sheds light on the anthocyanin and carotenoid synthesis pathways and candidate regulatory transcription factors underlying flower coloration and shows the potential of flower breeding or pigments engineering in tulips.
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Affiliation(s)
- Yunshu Wang
- Laboratory of Molecular Biology of Tomato, Bioengineering College, Chongqing University, Chongqing, 400044, People's Republic of China.
| | - Liujun Chen
- Laboratory of Molecular Biology of Tomato, Bioengineering College, Chongqing University, Chongqing, 400044, People's Republic of China.
| | - Qingling Yang
- Laboratory of Molecular Biology of Tomato, Bioengineering College, Chongqing University, Chongqing, 400044, People's Republic of China.
| | - Zongli Hu
- Laboratory of Molecular Biology of Tomato, Bioengineering College, Chongqing University, Chongqing, 400044, People's Republic of China.
| | - Pengyu Guo
- Laboratory of Molecular Biology of Tomato, Bioengineering College, Chongqing University, Chongqing, 400044, People's Republic of China.
| | - Qiaoli Xie
- Laboratory of Molecular Biology of Tomato, Bioengineering College, Chongqing University, Chongqing, 400044, People's Republic of China.
| | - Guoping Chen
- Laboratory of Molecular Biology of Tomato, Bioengineering College, Chongqing University, Chongqing, 400044, People's Republic of China.
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Gan Y, Kou Y, Yan F, Wang X, Wang H, Song X, Zhang M, Zhao X, Jia R, Ge H, Yang S. Comparative Transcriptome Profiling Analysis Reveals the Adaptive Molecular Mechanism of Yellow-Green Leaf in Rosa beggeriana 'Aurea'. FRONTIERS IN PLANT SCIENCE 2022; 13:845662. [PMID: 35401615 PMCID: PMC8987444 DOI: 10.3389/fpls.2022.845662] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/30/2021] [Accepted: 02/10/2022] [Indexed: 05/08/2023]
Abstract
Rosa beggeriana 'Aurea' is a yellow-green leaf (yl) mutant and originated from Rosa beggeriana Schrenk by 60Co-γ irradiation, which is an important ornamental woody species. However, the molecular mechanism of the yl mutant remains unknown. Herein, comparative transcriptome profiling was performed between the yl type and normal green color type (WT) by RNA sequencing. A total of 3,372 significantly differentially expressed genes (DEGs) were identified, consisting of 1,585 upregulated genes and 1,787 downregulated genes. Genes that took part in metabolic of biological process (1,090), membrane of cellular component (728), catalytic (1,114), and binding of molecular function (840) were significantly different in transcription level. DEGs involved in chlorophyll biosynthesis, carotenoids biosynthesis, cutin, suberine, wax biosynthesis, photosynthesis, chloroplast development, photosynthesis-antenna proteins, photosystem I (PSI) and photosystem II (PSII) components, CO2 fixation, ribosomal structure, and biogenesis related genes were downregulated. Meanwhile, linoleic acid metabolism, siroheme biosynthesis, and carbon source of pigments biosynthesis through methylerythritol 4-phosphate (MEP) pathways were upregulated. Moreover, a total of 147 putative transcription factors were signification different expression, involving NAC, WRKY, bHLH, MYB and AP2/ERF, C2H2, GRAS, and bZIP family gene. Our results showed that the disturbed pigments biosynthesis result in yl color by altering the ratio of chlorophylls and carotenoids in yl mutants. The yl mutants may evoke other metabolic pathways to compensate for the photodamage caused by the insufficient structure and function of chloroplasts, such as enhanced MEP pathways and linoleic acid metabolism against oxidative stress. This research can provide a reference for the application of leaf color mutants in the future.
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Affiliation(s)
- Ying Gan
- National Center of China for Flowers Improvement, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Yaping Kou
- National Center of China for Flowers Improvement, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Fei Yan
- National Center of China for Flowers Improvement, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Xiaofei Wang
- National Center of China for Flowers Improvement, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
- College of Landscape Architecture and Forestry, Qingdao Agricultural University, Qingdao, China
| | - Hongqian Wang
- National Center of China for Flowers Improvement, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Xiangshang Song
- National Center of China for Flowers Improvement, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Min Zhang
- National Center of China for Flowers Improvement, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Xin Zhao
- National Center of China for Flowers Improvement, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Ruidong Jia
- National Center of China for Flowers Improvement, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Hong Ge
- National Center of China for Flowers Improvement, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Shuhua Yang
- National Center of China for Flowers Improvement, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing, China
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Xing Y, Wang K, Huang C, Huang J, Zhao Y, Si X, Li Y. Global Transcriptome Analysis Revealed the Molecular Regulation Mechanism of Pigment and Reactive Oxygen Species Metabolism During the Stigma Development of Carya cathayensis. FRONTIERS IN PLANT SCIENCE 2022; 13:881394. [PMID: 35615144 PMCID: PMC9125253 DOI: 10.3389/fpls.2022.881394] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2022] [Accepted: 03/22/2022] [Indexed: 05/20/2023]
Abstract
Hickory (Carya cathayensis Sarg.) is a monoecious plant of the genus Carya of the Juglandaceae family. Its nuts contain a number of nutritional compounds and are deeply loved by consumers. Interestingly, it was observed that the color of hickory stigma changed obviously from blooming to mature. However, the molecular mechanism underlying color formation during stigma development and the biological significance of this phenomenon was mostly unknown. In this work, pigment content, reactive oxygen species (ROS) removal capacity, and transcriptome analysis of developing stigma of hickory at 4 differential sampling time points (S1, S2, S3, and S4) were performed to reveal the dynamic changes of related pigment, antioxidant capacity, and its internal molecular regulatory mechanism. It was found that total chlorophyll content was decreased slightly from S1 to S4, while total carotenoids content was increased from S1 to S3 but decreased gradually from S3 to S4. Total anthocyanin content continued to increase during the four periods of stigma development, reaching the highest level at the S4. Similarly, the antioxidant capacity of stigma was also gradually improved from S1 to S4. Furthermore, transcriptome analysis of developing hickory stigma identified 31,027 genes. Time-series analysis of gene expressions showed that these genes were divided into 12 clusters. Cluster 5 was enriched with some genes responsible for porphyrin and chlorophyll metabolism, carotenoid metabolism, and photosynthesis. Meanwhile, cluster 10 was enriched with genes related to flavonoid metabolism, including anthocyanin involved in ROS scavenging, and its related genes were mainly distributed in cluster 12. Based on the selected threshold values, a total of 10432 differentially expressed genes were screened out and enriched in the chlorophyll, carotenoid, anthocyanin, and ROS metabolism. The expression trends of these genes provided plausible explanations for the dynamic change of color and ROS level of hickory stigma with development. qRT-PCR analyses were basically consistent with the results of RNA-seq. The gene co-regulatory networks of pigment and ROS metabolism were further constructed and MYB113 (CCA0887S0030) and WRKY75 (CCA0573S0068) were predicted to be two core transcriptional regulators. These results provided in-depth evidence for revealing the molecular mechanism of color formation in hickory stigma and its biological significance.
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WADHWA M, BAKSHI MPS. Potential of waste flowers used as feed additive on the performance of goat kids. THE INDIAN JOURNAL OF ANIMAL SCIENCES 2021. [DOI: 10.56093/ijans.v91i10.117223] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
The present study was conducted to assess the impact of temple waste flowers as feed additive on the growth of goat kids. Marigold (Calendula officinalis) flowers constituted the bulk of WFs with negligible red roses (Rosa indica L). Marigold flowers as compared to rose flowers contained high (P<0.01) total phenols and flavonoids; and low (P<0.01) anthocyanins, saponins and vitamin C content. The in vitro studies revealed that the supplementation of WFs at 3 and 5% improved (P<0.01) digestibility of nutrients and VFAs production as compared to control. NGP at t½ increased (P<0.05) linearly up to 4% WFs supplementation and methane production decreased (P<0.05) at all levels of supplementation. Fifteen Beetal goat kids divided into three equal groups were fed TMR, or TMR supplemented with WFs at 3 or 5% of DM intake for 90 days. The daily DM consumed by the animals was similar in all the groups. The digestibility of proximate constituents at 3% level of WF was comparable with control TMR, but depressed (P<0.05) at 5% level of supplementation. The digestibility of cell wall constituents and N retention were not affected by WF supplementation. The average daily gain in weight was improved considerably. It was concluded that bio-active compounds present in WFs reduced the methane emission, resulting in improvement in nutrient utilization and growth of goat kids.
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Bhat ZY, Mohiuddin T, Kumar A, López-Jiménez AJ, Ashraf N. Crocus transcription factors CstMYB1 and CstMYB1R2 modulate apocarotenoid metabolism by regulating carotenogenic genes. PLANT MOLECULAR BIOLOGY 2021; 107:49-62. [PMID: 34417937 DOI: 10.1007/s11103-021-01180-6] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2020] [Accepted: 07/28/2021] [Indexed: 06/13/2023]
Abstract
Two MYB genes have been identified which regulate apocarotenoid metabolism in Crocus sativus. Apocarotenoids like crocin, picrocrocin and safranal are restricted to genus Crocus and are synthesized by oxidative cleavage of zeaxanthin followed by glycosylation reactions. In Crocus sativus, these apocarotenoids are synthesized in stigma part of the flower in developmentally regulated manner. Most of the genes of apocarotenoid pathway are known, however, the mechanism that regulates its tissue and stage specific biosynthesis remains elusive. MYB family was identified as the largest transcription factor family from Crocus transciptome which indicated its possible role in apocarotenoid regulation besides regulating other metabolic pathways. Towards this, we started with identification of 150 MYB genes from Crocus transcriptome databases. The phylogenetic analysis of Crocus MYB genes divided them into 27 clusters. Domain analysis resulted in identification of four groups of MYBs depending upon the number of R repeats present. Expression profiling indicated that 12 MYBs are upregulated in stigma out of which expression of four genes CstMYB1, CstMYB14, CstMYB16 and CstMYB1R2 correlated with crocin accumulation. Transient overexpression of two nuclear localized MYB genes (CstMYB1 and CstMYB1R2) in Crocus confirmed their role in regulating carotenoid metabolism. Yeast-one-hybrid confirmed that CstMYB1 binds to carotenoid cleavage dioxygenase 2 (CCD2) promoter while CstMYB1R2 binds to phytoene synthase (PSY) and CCD2 promoters. Overall, our study established that CstMYB1 and CstMYB1R2 regulate apocarotenoid biosynthesis by directly binding to promoters of pathway genes.
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Affiliation(s)
- Zahid Yaqoob Bhat
- Plant Biotechnology Division, CSIR-Indian Institute of Integrative Medicine, Sanat Nagar, Srinagar, Jammu and Kashmir, 190005, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, UP, 201002, India
| | - Tabasum Mohiuddin
- Plant Biotechnology Division, CSIR-Indian Institute of Integrative Medicine, Sanat Nagar, Srinagar, Jammu and Kashmir, 190005, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, UP, 201002, India
| | - Amit Kumar
- Instrumentation Division, CSIR-Indian Institute of Integrative Medicine, Canal Road, Jammu Tawi, 180001, India
| | - Alberto José López-Jiménez
- Department of Science and Agroforestal Technology and Genetics, University of Castilla, La Mancha, Spain
| | - Nasheeman Ashraf
- Plant Biotechnology Division, CSIR-Indian Institute of Integrative Medicine, Sanat Nagar, Srinagar, Jammu and Kashmir, 190005, India.
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, UP, 201002, India.
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Arias D, Arenas-M A, Flores-Ortiz C, Peirano C, Handford M, Stange C. Daucus carota DcPSY2 and DcLCYB1 as Tools for Carotenoid Metabolic Engineering to Improve the Nutritional Value of Fruits. FRONTIERS IN PLANT SCIENCE 2021; 12:677553. [PMID: 34512681 PMCID: PMC8427143 DOI: 10.3389/fpls.2021.677553] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/07/2021] [Accepted: 05/26/2021] [Indexed: 06/13/2023]
Abstract
Carotenoids are pigments with important nutritional value in the human diet. As antioxidant molecules, they act as scavengers of free radicals enhancing immunity and preventing cancer and cardiovascular diseases. Moreover, α-carotene and β-carotene, the main carotenoids of carrots (Daucus carota) are precursors of vitamin A, whose deficiency in the diet can trigger night blindness and macular degeneration. With the aim of increasing the carotenoid content in fruit flesh, three key genes of the carotenoid pathway, phytoene synthase (DcPSY2) and lycopene cyclase (DcLCYB1) from carrots, and carotene desaturase (XdCrtI) from the yeast Xanthophyllomyces dendrorhous, were optimized for expression in apple and cloned under the Solanum chilense (tomatillo) polygalacturonase (PG) fruit specific promoter. A biotechnological platform was generated and functionally tested by subcellular localization, and single, double and triple combinations were both stably transformed in tomatoes (Solanum lycopersicum var. Microtom) and transiently transformed in Fuji apple fruit flesh (Malus domestica). We demonstrated the functionality of the S. chilense PG promoter by directing the expression of the transgenes specifically to fruits. Transgenic tomato fruits expressing DcPSY2, DcLCYB1, and DcPSY2-XdCRTI, produced 1.34, 2.0, and 1.99-fold more total carotenoids than wild-type fruits, respectively. Furthermore, transgenic tomatoes expressing DcLCYB1, DcPSY2-XdCRTI, and DcPSY2-XdCRTI-DcLCYB1 exhibited an increment in β-carotene levels of 2.5, 3.0, and 2.57-fold in comparison with wild-type fruits, respectively. Additionally, Fuji apple flesh agroinfiltrated with DcPSY2 and DcLCYB1 constructs showed a significant increase of 2.75 and 3.11-fold in total carotenoids and 5.11 and 5.84-fold in β-carotene, respectively whereas the expression of DcPSY2-XdCRTI and DcPSY2-XdCRTI-DcLCYB1 generated lower, but significant changes in the carotenoid profile of infiltrated apple flesh. The results in apple demonstrate that DcPSY2 and DcLCYB1 are suitable biotechnological genes to increase the carotenoid content in fruits of species with reduced amounts of these pigments.
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Affiliation(s)
- Daniela Arias
- Centro de Biología Molecular Vegetal, Facultad de Ciencias, Universidad de Chile, Ñuñoa, Chile
| | - Anita Arenas-M
- Laboratorio de Nutrición y Genómica de Plantas, Instituto de Bioquímica y Microbiología, Facultad de Ciencias, Universidad Austral de Chile, Valdivia, Chile
| | - Carlos Flores-Ortiz
- Centro de Biología Molecular Vegetal, Facultad de Ciencias, Universidad de Chile, Ñuñoa, Chile
| | - Clio Peirano
- Centro de Biología Molecular Vegetal, Facultad de Ciencias, Universidad de Chile, Ñuñoa, Chile
| | - Michael Handford
- Centro de Biología Molecular Vegetal, Facultad de Ciencias, Universidad de Chile, Ñuñoa, Chile
| | - Claudia Stange
- Centro de Biología Molecular Vegetal, Facultad de Ciencias, Universidad de Chile, Ñuñoa, Chile
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Sørensen M, Møller BL. Metabolic Engineering of Photosynthetic Cells – in Collaboration with Nature. Metab Eng 2021. [DOI: 10.1002/9783527823468.ch21] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Shaker S, Morowvat MH, Ghasemi Y. Bioinformatics Analysis and Identification of Phytoene Synthase Gene in Microalgae. Recent Pat Biotechnol 2021; 15:216-226. [PMID: 34254932 DOI: 10.2174/1872208315666210712121951] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2020] [Revised: 03/08/2021] [Accepted: 04/20/2021] [Indexed: 11/22/2022]
Abstract
BACKGROUND Carotenoids are known as lipophilic secondary metabolites with important biological activities, which are mostly used in the food and pharmaceutical industry. They contribute to the colours of many fruits and flowers. Studies on the biosynthetic pathways of isoprenoids and carotenoids are still scarce, especially in microalgae, and are limited to specific groups Dunaliella spp. In the Chlorophyta taxon of algae, the 2-C-methyl-D-erythritol 4-phosphate/1-deoxy-D-xylulose 5-phosphate (DOXP/MEP) is the synthesis pathway of sterols and carotenoids. OBJECTIVES In this study, we used 12 Psy gene sequences in Dunaliella sp., also Scenedesmus acutus, and Diospyros kaki to investigate a genome-wide search. The results are useful for better identification of carotenoids metabolisms and increasing the production rate of beta-carotene in pharmaceutical, food, and industrial processes. METHODS Phytoene synthase (Psy) from Dunaliella spp. was selected as the first regulatory point in the carotenoids pathway that catalysis the formation of geranylgeranyl pyrophosphate in isoprenoid biosynthesis. Structural, evolutionary, and physics-chemical characteristics were investigated using various bioinformatics tools and computer techniques. Moreover, some recently published patents were also regarded. RESULTS The maximum length of the conserved motif was 5167 bp for Dunaliella. sp. (DQ463306.1), and the smallest length of the conserved motif was 416 bp belong to D. salina (JQ762451.1). The average molecular weight of species was 41820.53 Da. The theoretical pI of species varied from 4.87 to 9.65, indicating vernation in the acidic nature. Two strains of D. bardawil (U91900.1 and EU328287.1) showed just a long-distance relationship with all other Dunaliella strains. Whilst, D. parva displayed the furthest vicinity with all the studied strains. CONCLUSION Our study highlighted the Psy regulatory mechanism as a key factor in the carotenoids pathway to facilitate genetic and metabolic engineering studies. The obtained three-dimensional arrangement of the amino acids revealed the regional structures and folding of the diverse segments of helices, sheets, turns. This information is a key point to unveil the protein's operation mechanism. Besides, we confirmed the suitability of bioinformatic approaches for analysing the gene structures and identifying the new Psy genes in unstudied microalgal strains.
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Affiliation(s)
- Saeedeh Shaker
- Pharmaceutical Sciences Research Centre, Shiraz University of Medical Sciences, P.O. Box 71468-64685, Shiraz, Iran
| | - Mohammad Hossein Morowvat
- Pharmaceutical Sciences Research Centre, Shiraz University of Medical Sciences, P.O. Box 71468-64685, Shiraz, Iran
| | - Younes Ghasemi
- Pharmaceutical Sciences Research Centre, Shiraz University of Medical Sciences, P.O. Box 71468-64685, Shiraz, Iran
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Singh A, Panwar R, Mittal P, Hassan MI, Singh IK. Plant cytochrome P450s: Role in stress tolerance and potential applications for human welfare. Int J Biol Macromol 2021; 184:874-886. [PMID: 34175340 DOI: 10.1016/j.ijbiomac.2021.06.125] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 06/15/2021] [Accepted: 06/16/2021] [Indexed: 01/06/2023]
Abstract
Cytochrome P450s (CYPs) are a versatile group of enzymes and one of the largest families of proteins, controlling various physiological processes via biosynthetic and detoxification pathways. CYPs perform multiple roles through a critical irreversible enzymatic reaction in which an oxygen atom is inserted within hydrophobic molecules, converting them into the reactive and hydro soluble components. During evolution, plants have acquired significantly more number of CYPs and represent about 1% of the encoded genes . CYPs are highly conserved proteins involved in growth, development and tolerance against biotic and abiotic stresses. Furthermore, CYPs reinforce plants' molecular and chemical defense mechanisms by regulating the biosynthesis of secondary metabolites, enhancing reactive oxygen species (ROS) scavenging and controlling biosynthesis and homeostasis of phytohormones, including abscisic acid (ABA) and jasmonates. Thus, they are the critical targets of metabolic engineering for enhancing plant defense against environmental stresses. Additionally, CYPs are also used as biocatalysts in the fields of pharmacology and phytoremediation. Herein, we highlight the role of CYPs in plant stress tolerance and their applications for human welfare.
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Affiliation(s)
- Archana Singh
- Department of Botany, Hansraj College, University of Delhi, New Delhi 110007, India.
| | - Ruby Panwar
- Department of Botany, Hansraj College, University of Delhi, New Delhi 110007, India
| | - Pooja Mittal
- Molecular Biology Research Lab, Department of Zoology, Deshbandhu College, University of Delhi, Kalkaji, New Delhi 110019, India
| | - Md Imtaiyaz Hassan
- Centre for Interdisciplinary Research in Basic Sciences, Jamia Millia Islamia, Jamia Nagar, New Delhi 110025, India
| | - Indrakant Kumar Singh
- Molecular Biology Research Lab, Department of Zoology, Deshbandhu College, University of Delhi, Kalkaji, New Delhi 110019, India.
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Requena-Ramírez MD, Hornero-Méndez D, Rodríguez-Suárez C, Atienza SG. Durum Wheat ( Triticum durum L.) Landraces Reveal Potential for the Improvement of Grain Carotenoid Esterification in Breeding Programs. Foods 2021; 10:foods10040757. [PMID: 33918139 PMCID: PMC8067221 DOI: 10.3390/foods10040757] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Revised: 03/30/2021] [Accepted: 03/31/2021] [Indexed: 12/23/2022] Open
Abstract
Carotenoids are essential in the human diet for their important functions in health. Besides, they are responsible for the yellow pigments desirable for industrial quality in durum wheat. The remarkable carotenoid content of durum wheat endosperm is mostly due to lutein. However, lutein esters have not been previously detected in durum wheat as in other cereals such as common wheat, tritordeum or Hordeum chilense. Esterification increases carotenoid stability and allows greater retention and accumulation through the food chain. Therefore, carotenoid esterification is revealed as a new key target in breeding. We characterized the carotenoid profile of 156 accessions of the Spanish durum wheat collection, searching for landraces with esterification ability. Interestingly, four accessions produced lutein monoesters and diesters. Also, traces of lutein monoesters were detected in eleven accessions. The identification of the first durum wheat accessions with esterification ability reported herein is a remarkable advance for carotenoid biofortification. Furthermore, variation for the relative content of zeaxanthin, α-carotene and β-carotene was also observed. This diversity for the β,ε and β,β branches of the carotenogenic pathway also represents a new opportunity for breeding for specific carotenoids in biofortification programs.
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Affiliation(s)
| | - Dámaso Hornero-Méndez
- Department of Food Phytochemistry, Instituto de la Grasa (CSIC), Campus Universidad Pablo de Olavide, Edificio 46, Ctra de Utrera, Km 1, E-41013 Sevilla, Spain;
| | - Cristina Rodríguez-Suárez
- Instituto de Agricultura Sostenible (CSIC), Alameda del Obispo, s/n, E-14004 Córdoba, Spain; (M.D.R.-R.); (C.R.-S.)
| | - Sergio G. Atienza
- Instituto de Agricultura Sostenible (CSIC), Alameda del Obispo, s/n, E-14004 Córdoba, Spain; (M.D.R.-R.); (C.R.-S.)
- Correspondence:
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Gao J, Yang S, Tang K, Li G, Gao X, Liu B, Wang S, Feng X. GmCCD4 controls carotenoid content in soybeans. PLANT BIOTECHNOLOGY JOURNAL 2021; 19:801-813. [PMID: 33131209 PMCID: PMC8051601 DOI: 10.1111/pbi.13506] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2020] [Revised: 10/06/2020] [Accepted: 10/26/2020] [Indexed: 05/23/2023]
Abstract
To better understand the mechanisms regulating plant carotenoid metabolism in staple crop, we report the map-based cloning and functional characterization of the Glycine max carotenoid cleavage dioxygenase 4 (GmCCD4) gene, which encodes a carotenoid cleavage dioxygenase enzyme involved in metabolizing carotenoids into volatile β-ionone. Loss of GmCCD4 protein function in four Glycine max increased carotenoid content (gmicc) mutants resulted in yellow flowers due to excessive accumulation of carotenoids in flower petals. The carotenoid contents also increase three times in gmicc1 seeds. A genome-wide association study indicated that the GmCCD4 locus was one major locus associated with carotenoid content in natural population. Further analysis indicated that the haplotype-1 of GmCCD4 gene was positively associated with higher carotenoid levels in soybean cultivars and accumulated more β-carotene in engineered E. coli with ectopic expression of different GmCCD4 haplotypes. These observations uncovered that GmCCD4 was a negative regulator of carotenoid content in soybean, and its various haplotypes provide useful resources for future soybean breeding practice.
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Affiliation(s)
- Jinshan Gao
- Key Laboratory of Soybean Molecular Design BreedingNortheast Institute of Geography and AgroecologyChinese Academy of SciencesChangchunChina
| | - Suxin Yang
- Key Laboratory of Soybean Molecular Design BreedingNortheast Institute of Geography and AgroecologyChinese Academy of SciencesChangchunChina
| | - Kuanqiang Tang
- Key Laboratory of Soybean Molecular Design BreedingNortheast Institute of Geography and AgroecologyChinese Academy of SciencesChangchunChina
| | - Guang Li
- Key Laboratory of Soybean Molecular Design BreedingNortheast Institute of Geography and AgroecologyChinese Academy of SciencesChangchunChina
| | - Xiang Gao
- Key Laboratory of Molecular Epigenetics of Ministry of Education (MOE)Northeast Normal UniversityChangchunChina
| | - Bao Liu
- Key Laboratory of Molecular Epigenetics of Ministry of Education (MOE)Northeast Normal UniversityChangchunChina
| | - Shaodong Wang
- Key Laboratory of Soybean Biology of Education MinistryNortheast Agricultural UniversityHarbinChina
| | - Xianzhong Feng
- Key Laboratory of Soybean Molecular Design BreedingNortheast Institute of Geography and AgroecologyChinese Academy of SciencesChangchunChina
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Requena-Ramírez MD, Atienza SG, Hornero-Méndez D, Rodríguez-Suárez C. Mediation of a GDSL Esterase/Lipase in Carotenoid Esterification in Tritordeum Suggests a Common Mechanism of Carotenoid Esterification in Triticeae Species. FRONTIERS IN PLANT SCIENCE 2020; 11:592515. [PMID: 33746990 PMCID: PMC7971304 DOI: 10.3389/fpls.2020.592515] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/07/2020] [Accepted: 11/24/2020] [Indexed: 05/24/2023]
Abstract
Carotenoids are essential in human diet, so that the development of programs toward carotenoid enhancement has been promoted in several crops. The cereal tritordeum, the amphiploid derived from the cross between Hordeum chilense Roem. et Schulz. and durum wheat has a remarkable carotenoid content in the endosperm. Besides, a high proportion of these carotenoids are esterified with fatty acids. The identification of the gene(s) responsible for xanthophyll esterification would be useful for breeding as esterified carotenoids show an increased ability to accumulate within plant cells and have a higher stability during post-harvest storage. In this work, we analyzed five genes identified as candidates for coding the xanthophyll acyltransferase (XAT) enzyme responsible for lutein esterification in H. chilense genome. All these genes were expressed during grain development in tritordeum, but only HORCH7HG021460 was highly upregulated. Sequence analysis of HORCH7HG021460 revealed a G-to-T transversion, causing a Glycine to Cysteine substitution in the protein of H290 (the only accession not producing quantifiable amounts of lutein esters, hereinafter referred as zero-ester) of H. chilense compared to the esterifying genotypes. An allele-specific marker was designed for the SNP detection in the H. chilense diversity panel. From the 93 accessions, only H290 showed the T allele and the zero-ester phenotype. Furthermore, HORCH7HG021460 is the orthologue of XAT-7D, which encodes a XAT enzyme responsible for carotenoid esterification in wheat. Thus, HORCH7HG021460 (XAT-7Hch) is a strong candidate for lutein esterification in H. chilense and tritordeum, suggesting a common mechanism of carotenoid esterification in Triticeae species. The transference of XAT-7Hch to wheat may be useful for the enhancement of lutein esters in biofortification programs.
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Affiliation(s)
| | - Sergio G. Atienza
- Instituto de Agricultura Sostenible ‐ Consejo Superior de Investigaciones Científicas, Córdoba, Spain
| | - Dámaso Hornero-Méndez
- Department of Food Phytochemistry, Instituto de la Grasa ‐ Consejo Superior de Investigaciones Científicas, Campus Universidad Pablo de Olavide, Seville, Spain
| | - Cristina Rodríguez-Suárez
- Instituto de Agricultura Sostenible ‐ Consejo Superior de Investigaciones Científicas, Córdoba, Spain
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Karniel U, Koch A, Zamir D, Hirschberg J. Development of zeaxanthin-rich tomato fruit through genetic manipulations of carotenoid biosynthesis. PLANT BIOTECHNOLOGY JOURNAL 2020; 18:2292-2303. [PMID: 32320515 PMCID: PMC7589248 DOI: 10.1111/pbi.13387] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2019] [Revised: 02/19/2020] [Accepted: 03/26/2020] [Indexed: 05/22/2023]
Abstract
The oxygenated carotenoid zeaxanthin provides numerous benefits to human health due to its antioxidant properties. Especially it is linked to protecting, together with the xanthophyll lutein, the retina in the human eye by filtering harmful blue light thus delaying the progression of age-related macular degeneration (AMD), the most prevalent cause of blindness in developed countries. Despite its high nutritional value, zeaxanthin is less available than other substantial carotenoids in our diet. To solve this shortage, we chose to develop a new food source that would contain a high concentration of natural zeaxanthin. Tomato (Solanum lycopersicum L.) was selected as the target plant since it is the second largest vegetable crop grown worldwide and its fruit characteristically synthesizes and accumulates a high concentration of carotenoids. We employed two genetic approaches in order to enhance zeaxanthin biosynthesis in tomato fruit: a transgenic metabolic engineering and classical genetic breeding. A nontransgenic tomato line, named 'Xantomato', was generated whose fruit accumulated zeaxanthin at a concentration of 39 μg/g fresh weight (or 577 μg/g dry weight), which comprised ca. 50% of total fruit carotenoids compared to zero in the wild type. This is the highest concentration of zeaxanthin reached in a primary crop. Xantomato can potentially increase zeaxanthin availability in the human diet and serve as raw material for industrial applications.
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Affiliation(s)
- Uri Karniel
- Department of GeneticsAlexander Silberman Institute of Life SciencesThe Hebrew University of JerusalemJerusalemIsrael
| | - Amit Koch
- Robert H. Smith Institute of Plant Sciences and GeneticsThe Hebrew University of JerusalemRehovotIsrael
| | - Dani Zamir
- Robert H. Smith Institute of Plant Sciences and GeneticsThe Hebrew University of JerusalemRehovotIsrael
| | - Joseph Hirschberg
- Department of GeneticsAlexander Silberman Institute of Life SciencesThe Hebrew University of JerusalemJerusalemIsrael
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24
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Yaakub Z, Kamaruddin K, Singh R, Mustafa S, Marjuni M, Ting NC, Amiruddin MD, Leslie LET, Cheng-Li OL, Sritharan K, Nookiah R, Jansen J, Ong Abdullah M. An integrated linkage map of interspecific backcross 2 (BC 2) populations reveals QTLs associated with fatty acid composition and vegetative parameters influencing compactness in oil palm. BMC PLANT BIOLOGY 2020; 20:356. [PMID: 32727448 PMCID: PMC7391521 DOI: 10.1186/s12870-020-02563-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/26/2019] [Accepted: 07/21/2020] [Indexed: 06/11/2023]
Abstract
BACKGROUND Molecular breeding has opened new avenues for crop improvement with the potential for faster progress. As oil palm is the major producer of vegetable oil in the world, its improvement, such as developing compact planting materials and altering its oils' fatty acid composition for wider application, is important. RESULTS This study sought to identify the QTLs associated with fatty acid composition and vegetative traits for compactness in the crop. It integrated two interspecific backcross two (BC2) mapping populations to improve the genetic resolution and evaluate the consistency of the QTLs identified. A total 1963 markers (1814 SNPs and 149 SSRs) spanning a total map length of 1793 cM were integrated into a consensus map. For the first time, some QTLs associated with vegetative parameters and carotene content were identified in interspecific hybrids, apart from those associated with fatty acid composition. The analysis identified 8, 3 and 8 genomic loci significantly associated with fatty acids, carotene content and compactness, respectively. CONCLUSIONS Major genomic region influencing the traits for compactness and fatty acid composition was identified in the same chromosomal region in the two populations using two methods for QTL detection. Several significant loci influencing compactness, carotene content and FAC were common to both populations, while others were specific to particular genetic backgrounds. It is hoped that the QTLs identified will be useful tools for marker-assisted selection and accelerate the identification of desirable genotypes for breeding.
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Affiliation(s)
- Zulkifli Yaakub
- Malaysian Palm Oil Board (MPOB), 6 Persiaran Institusi, Bandar Baru Bangi, 43000, Kajang, Selangor, Malaysia.
| | - Katialisa Kamaruddin
- Malaysian Palm Oil Board (MPOB), 6 Persiaran Institusi, Bandar Baru Bangi, 43000, Kajang, Selangor, Malaysia
| | - Rajinder Singh
- Malaysian Palm Oil Board (MPOB), 6 Persiaran Institusi, Bandar Baru Bangi, 43000, Kajang, Selangor, Malaysia
| | - Suzana Mustafa
- Malaysian Palm Oil Board (MPOB), 6 Persiaran Institusi, Bandar Baru Bangi, 43000, Kajang, Selangor, Malaysia
| | - Marhalil Marjuni
- Malaysian Palm Oil Board (MPOB), 6 Persiaran Institusi, Bandar Baru Bangi, 43000, Kajang, Selangor, Malaysia
| | - Ngoot-Chin Ting
- Malaysian Palm Oil Board (MPOB), 6 Persiaran Institusi, Bandar Baru Bangi, 43000, Kajang, Selangor, Malaysia
| | - Mohd Din Amiruddin
- Malaysian Palm Oil Board (MPOB), 6 Persiaran Institusi, Bandar Baru Bangi, 43000, Kajang, Selangor, Malaysia
| | - Low Eng-Ti Leslie
- Malaysian Palm Oil Board (MPOB), 6 Persiaran Institusi, Bandar Baru Bangi, 43000, Kajang, Selangor, Malaysia
| | - Ooi Leslie Cheng-Li
- Malaysian Palm Oil Board (MPOB), 6 Persiaran Institusi, Bandar Baru Bangi, 43000, Kajang, Selangor, Malaysia
| | - Kandha Sritharan
- United Plantations Bhd., Jendarata Estate, 36009, Teluk Intan, Perak, Malaysia
| | - Rajanaidu Nookiah
- Malaysian Palm Oil Board (MPOB), 6 Persiaran Institusi, Bandar Baru Bangi, 43000, Kajang, Selangor, Malaysia
| | - Johannes Jansen
- Wageningen University and Research Centre, P.O. Box 100, Wageningen, 6700 AC, The Netherlands
| | - Meilina Ong Abdullah
- Malaysian Palm Oil Board (MPOB), 6 Persiaran Institusi, Bandar Baru Bangi, 43000, Kajang, Selangor, Malaysia
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25
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Fernández-López JA, Fernández-Lledó V, Angosto JM. New insights into red plant pigments: more than just natural colorants. RSC Adv 2020; 10:24669-24682. [PMID: 35516216 PMCID: PMC9055186 DOI: 10.1039/d0ra03514a] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2020] [Accepted: 06/16/2020] [Indexed: 12/02/2022] Open
Abstract
Pigments make nature both colorful and attractive. Humans have always incorporated the natural pigments of fruits, vegetables and spices into their dietary requirements. Naturally occurring red pigments in plants are carotenoids, anthocyanins and betacyanins. Natural pigments, apart from colour, provide added properties and are therefore considered to be bioactive constituents. Red natural colorants are one of the most widely used in the food industry. The interest in these pigments lies in the enhancement of the healthy effects of the diet. In this context, attention is given to carotenoids, anthocyanins and betacyanins, with emphasis on the basic chemical and biochemical attributes and wide-ranging health-promoting benefits of these pigments. Thus, in this review, we systematically present the advantages and limitations of these natural pigments as food colorants in relation to their physico-chemical properties, reactivity and bioactivity.
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Affiliation(s)
- José A Fernández-López
- Department of Chemical and Environmental Engineering, Technical University of Cartagena (UPCT) Paseo Alfonso XIII 52 E-30203 Cartagena Murcia Spain
| | - Vicente Fernández-Lledó
- Higher Technical School of Telecommunications, Technical University of Madrid (UPM) Madrid Spain
| | - José M Angosto
- Department of Chemical and Environmental Engineering, Technical University of Cartagena (UPCT) Paseo Alfonso XIII 52 E-30203 Cartagena Murcia Spain
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26
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Sestili F, Garcia-Molina MD, Gambacorta G, Beleggia R, Botticella E, De Vita P, Savatin DV, Masci S, Lafiandra D. Provitamin A Biofortification of Durum Wheat through a TILLING Approach. Int J Mol Sci 2019; 20:ijms20225703. [PMID: 31739436 PMCID: PMC6888361 DOI: 10.3390/ijms20225703] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2019] [Revised: 11/08/2019] [Accepted: 11/12/2019] [Indexed: 01/06/2023] Open
Abstract
Macro- and micronutrients, essential for the maintenance of human metabolism, are assimilated daily through the diet. Wheat and other major cereals are a good source of nutrients, such as carbohydrates and proteins, but cannot supply a sufficient amount of essential micronutrients, including provitamin A. As vitamin A deficiency (VAD) leads to several serious diseases throughout the world, the biofortification of a major staple crop, such as wheat, represents an effective way to preserve human health in developing countries. In the present work, a key enzyme involved in the branch of carotenoids pathway producing β-carotene, lycopene epsilon cyclase, has been targeted by a Targeting Induced Local Lesions in Genomes (TILLING) approach in a “block strategy” perspective. The null mutant genotype showed a strong reduction in the expression of the lcyE gene and also interesting pleiotropic effects on an enzyme (β-ring hydroxylase) acting downstream in the pathway. Biochemical profiling of carotenoids in the wheat mutant lines showed an increase of roughly 75% in β-carotene in the grains of the complete mutant line compared with the control. In conclusion, we describe here the production and characterization of a new wheat line biofortified with provitamin A obtained through a nontransgenic approach, which also sheds new light on the molecular mechanism governing carotenoid biosynthesis in durum wheat.
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Affiliation(s)
- Francesco Sestili
- Department of Agriculture and Forest Sciences, University of Tuscia, 01100 Viterbo, Italy; (F.S.); (M.D.G.-M.); (G.G.); (E.B.); (D.V.S.); (S.M.)
| | - Maria Dolores Garcia-Molina
- Department of Agriculture and Forest Sciences, University of Tuscia, 01100 Viterbo, Italy; (F.S.); (M.D.G.-M.); (G.G.); (E.B.); (D.V.S.); (S.M.)
| | - Gianluca Gambacorta
- Department of Agriculture and Forest Sciences, University of Tuscia, 01100 Viterbo, Italy; (F.S.); (M.D.G.-M.); (G.G.); (E.B.); (D.V.S.); (S.M.)
| | - Romina Beleggia
- Council for Agricultural Research and Economics (CREA), Research Centre for Cereal and Industrial Crops (CREA-CI), 71122 Foggia, Italy; (R.B.); (P.D.V.)
| | - Ermelinda Botticella
- Department of Agriculture and Forest Sciences, University of Tuscia, 01100 Viterbo, Italy; (F.S.); (M.D.G.-M.); (G.G.); (E.B.); (D.V.S.); (S.M.)
| | - Pasquale De Vita
- Council for Agricultural Research and Economics (CREA), Research Centre for Cereal and Industrial Crops (CREA-CI), 71122 Foggia, Italy; (R.B.); (P.D.V.)
| | - Daniel Valentin Savatin
- Department of Agriculture and Forest Sciences, University of Tuscia, 01100 Viterbo, Italy; (F.S.); (M.D.G.-M.); (G.G.); (E.B.); (D.V.S.); (S.M.)
| | - Stefania Masci
- Department of Agriculture and Forest Sciences, University of Tuscia, 01100 Viterbo, Italy; (F.S.); (M.D.G.-M.); (G.G.); (E.B.); (D.V.S.); (S.M.)
| | - Domenico Lafiandra
- Department of Agriculture and Forest Sciences, University of Tuscia, 01100 Viterbo, Italy; (F.S.); (M.D.G.-M.); (G.G.); (E.B.); (D.V.S.); (S.M.)
- Correspondence: ; Tel.: +39-0761-357-243
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27
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Zhang C, Wang Y, Wang W, Cao Z, Fu Q, Bao M, He Y. Functional Analysis of the Marigold (Tagetes erecta) Lycopene ε-cyclase (TeLCYe) Promoter in Transgenic Tobacco. Mol Biotechnol 2019; 61:703-713. [PMID: 31286381 DOI: 10.1007/s12033-019-00197-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Lycopene ε-cyclases (LCYEs) are key enzymes in carotenoid biosynthesis converting red lycopene to downstream lutein. The flowers of marigold (Tagetes erecta) have been superior sources to supply lutein. However, the transcriptional regulatory mechanisms of LCYe in lutein synthesis are still unclear in marigold. In this work, the expression pattern of the TeLCYe gene in marigold indicated that TeLCYe mainly expressed in floral organs. To gain a better understanding of the expression and regulatory mechanism of TeLCYe gene, the TeLCYe promoter was isolated, sequenced, and analyzed through bioinformatics tools. The results suggested that the sequence of TeLCYe promoter contained various putative cis-acting elements responsive to exogenous and endogenous factors. The full-length TeLCYe promoter and three 5'-deletion fragments were fused to the GUS reporter gene and transferred into tobacco to test the promoter activities. A strong GUS activity was observed in stems of seedlings, leaves of seedlings, middle stems, top leaves, petals, stamens, and stigmas in transgenic tobacco containing full-length TeLCYe promoter LP0-2086. Deletion of - 910 to - 429 bp 5' to ATG significantly increased the GUS activity in chloroplast-rich tissues and floral organs, while deletion occurring from 1170 to 910 bp upstream ATG decreased the TeLCYe promoter strength in stems of seedlings, leaves of seedlings, top leaves and sepals. Functional characterization of the full-length TeLCYe promoter and its' deletion fragments in stable transgenic tobacco indicated that the LP0-2086 contains some specific cis-acting elements, which might result in the high-level expression of in floral organs, and LP2-910 might contain some specific cis-acting elements which improved GUS activities in vegetable tissues.
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Affiliation(s)
- Chunling Zhang
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, Hubei, China
| | - Yaqin Wang
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, Hubei, China
| | - Wenjing Wang
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, Hubei, China
| | - Zhe Cao
- Crop Development Centre/Department of Plant Sciences, University of Saskatchewan, Saskatoon, S7N5A8, Canada
| | - Qiang Fu
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, Hubei, China
| | - Manzhu Bao
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, Hubei, China
| | - Yanhong He
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, 430070, Hubei, China.
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28
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Pan X, Li Y, Pan G, Yang A. Bioinformatics study of 1-deoxy-D-xylulose-5-phosphate synthase (DXS) genes in Solanaceae. Mol Biol Rep 2019; 46:5175-5184. [PMID: 31313133 DOI: 10.1007/s11033-019-04975-5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2018] [Accepted: 07/10/2019] [Indexed: 02/06/2023]
Abstract
Isoprenoids, the largest and most diverse class of secondary metabolites in plants, play an important role in plant growth and development. Isoprenoids can be synthesized by two distinct pathways: the methylerythritol-4-phosphate (MEP) pathway and the mevalonate (MVA) pathway. 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is the first step and a key regulatory enzyme of the MEP pathway in plants. The DXS gene has been reported to play a key role in seedling development, flowering, and fruit quality in plants of the Solanaceae, such as tomato, potato and tobacco. However, to improve our understanding and utilization of DXS genes, a thorough bioinformatics study is needed. In this study, 48 DXS genes were aligned and analyzed by computational tools to predict their protein properties, including molecular mass, theoretical isoelectric point (pI), signal peptides, transmembrane and conserved domains, and expression patterns. Sequence comparison analysis revealed strong conservation among the 48 DXS genes. Phylogenetic analysis indicated that all DXS genes were derived from one ancestor and could be classified into three groups with different expression patterns. Moreover, the functional divergence of DXS was restricted after gene duplication. The results suggested that the function and evolution of the DXS gene family were highly conserved and that the DXS genes of Group I may play a more important role than those of other groups.
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Affiliation(s)
- Xuhao Pan
- Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao, 266101, People's Republic of China.
| | - Yiting Li
- Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao, 266101, People's Republic of China
| | - Guangtang Pan
- Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, People's Republic of China
| | - Aiguo Yang
- Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao, 266101, People's Republic of China.
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29
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Chitrakar B, Zhang M, Bhandari B. Edible flowers with the common name “marigold”: Their therapeutic values and processing. Trends Food Sci Technol 2019. [DOI: 10.1016/j.tifs.2019.05.008] [Citation(s) in RCA: 35] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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30
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Kumar S, Palve A, Joshi C, Srivastava RK, Rukhsar. Crop biofortification for iron (Fe), zinc (Zn) and vitamin A with transgenic approaches. Heliyon 2019; 5:e01914. [PMID: 31338452 PMCID: PMC6579847 DOI: 10.1016/j.heliyon.2019.e01914] [Citation(s) in RCA: 46] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2019] [Revised: 05/07/2019] [Accepted: 06/03/2019] [Indexed: 11/20/2022] Open
Abstract
Micronutrient malnutrition is an important issue in the developing countries especially in Asia and Africa where millions of school-going children and pregnant women are affected. Poor people are more exposed to risks of malnutrition and hidden hunger due to intake of carbohydrate rich but micronutrient deficient plant based food. The expansion of high yielding but micronutrient poor cultivars further intensified the malnutrition. The existing approaches viz., supplementation and food fortification of staple food with minerals and vitamins can address the issue of adequate nutrition security. But supplementation and fortification is neither feasible for each nutrient specially iron nor viable due to recurrent cost. Recently, genetic bio-fortification of crops is emerged as self-targeted and non-recurrent approach to address the micronutrient malnutrition. Most of the traditional breeding approaches were limited due to non-availability of enough genetic variation in the crossable genepools. Additionally, it also lacks the modulation of target gene expression underlying the micronutrient accumulation. At this juncture, genetic engineering based food biofortification is promising way to address the hidden hunger especially, where breeding is not rewarding due to lack of genetic variability. Genetic modification through gene technology is swift and accurate method to develop nutrient denser crops without any recurrent investment as compared to different strategies.
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Affiliation(s)
- Sushil Kumar
- Centre of Excellence in Agricultural Biotechnology, Anand Agricultural University, Anand, India
| | - Adinath Palve
- Centre of Excellence in Agricultural Biotechnology, Anand Agricultural University, Anand, India
| | - Chitra Joshi
- Centre of Excellence in Agricultural Biotechnology, Anand Agricultural University, Anand, India
| | - Rakesh K. Srivastava
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, India
| | - Rukhsar
- Centre of Excellence in Agricultural Biotechnology, Anand Agricultural University, Anand, India
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31
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Jin X, Bai C, Bassie L, Nogareda C, Romagosa I, Twyman RM, Christou P, Zhu C. ZmPBF and ZmGAMYB transcription factors independently transactivate the promoter of the maize (Zea mays) β-carotene hydroxylase 2 gene. THE NEW PHYTOLOGIST 2019; 222:793-804. [PMID: 30489637 DOI: 10.1111/nph.15614] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2018] [Accepted: 11/21/2018] [Indexed: 05/26/2023]
Abstract
The maize (Zea mays) enzyme β-carotene hydroxylase 2 (ZmBCH2) controls key steps in the conversion of β-carotene to zeaxanthin in the endosperm. The ZmBCH2 gene has an endosperm-preferred and developmentally regulated expression profile, but the detailed regulatory mechanism is unknown. To gain insight into the regulation of ZmBCH2, we isolated 2036 bp of the 5'-flanking region containing the 263 bp 5'-untranslated region (5'-UTR) including the first intron. We linked this to the β-glucuronidase reporter gene gusA. We found that high-level expression of gusA in rice seeds requires the 5'-UTR for enhanced activation. Truncated variants of the ZmBCH2 promoter retained their seed-preferred expression profile as long as a prolamin box and AACA motif were present. We identified candidate genes encoding the corresponding transcription factors (ZmPBF and ZmGAMYB) and confirmed that their spatiotemporal expression profiles are similar to ZmBCH2. Both ZmPBF and ZmGAMYB can transactivate ZmBCH2 expression in maize endosperm. To eliminate potential confounding effects in maize, we characterized the regulation of the minimal promoter region of ZmBCH2 in transgenic rice. This revealed that ZmPBF and ZmGAMYB independently transactivate the ZmBCH2 promoter. The mechanism that underpins our data provides an exciting new strategy for the control of target gene expression in engineered plants.
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Affiliation(s)
- Xin Jin
- Department of Plant Production and Forestry Science, University of Lleida-Agrotecnio Center, Av. Alcalde Rovira Roure, 191, Lleida, 25198, Spain
| | - Chao Bai
- Department of Plant Production and Forestry Science, University of Lleida-Agrotecnio Center, Av. Alcalde Rovira Roure, 191, Lleida, 25198, Spain
- Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing, 10081, China
| | - Ludovic Bassie
- Department of Plant Production and Forestry Science, University of Lleida-Agrotecnio Center, Av. Alcalde Rovira Roure, 191, Lleida, 25198, Spain
| | - Carmina Nogareda
- Department of Animal Science, ETSEA, University of Lleida-Agrotecnio Center, Lleida, 25198, Spain
| | - Ignacio Romagosa
- Department of Plant Production and Forestry Science, University of Lleida-Agrotecnio Center, Av. Alcalde Rovira Roure, 191, Lleida, 25198, Spain
| | | | - Paul Christou
- Department of Plant Production and Forestry Science, University of Lleida-Agrotecnio Center, Av. Alcalde Rovira Roure, 191, Lleida, 25198, Spain
- ICREA, Catalan Institute for Research and Advanced Studies, Passeig Lluís Companys 23, Barcelona, 08010, Spain
| | - Changfu Zhu
- Department of Plant Production and Forestry Science, University of Lleida-Agrotecnio Center, Av. Alcalde Rovira Roure, 191, Lleida, 25198, Spain
- School of Life Sciences, Changchun Normal University, Changchun, 130032, China
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32
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Li X, Ye J, Munir S, Yang T, Chen W, Liu G, Zheng W, Zhang Y. Biosynthetic Gene Pyramiding Leads to Ascorbate Accumulation with Enhanced Oxidative Stress Tolerance in Tomato. Int J Mol Sci 2019; 20:ijms20071558. [PMID: 30925709 PMCID: PMC6480547 DOI: 10.3390/ijms20071558] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2019] [Revised: 03/22/2019] [Accepted: 03/25/2019] [Indexed: 01/03/2023] Open
Abstract
Ascorbic acid (AsA) has high antioxidant activities, and its biosynthesis has been well studied by engineering of a single structural gene (SG) in staple crops, such as tomato (Solanum lycopersicum). However, engineering the AsA metabolic pathway by multi-SG for biofortification remains unclear. In this study, pyramiding transgenic lines including GDP-Mannose 3',5'-epimerase (GME) × GDP-d-mannose pyrophosphorylase (GMP), GDP-l-Gal phosphorylase (GGP) × l-Gal-1-P phosphatase (GPP) and GME × GMP × GGP × GPP, were obtained by hybridization of four key genes to get over-expression transgenic plants (GME, GMP, GGP, and GPP) in tomato. Pyramiding lines exhibited a significant increase in total ascorbate in leaves and red fruits except for GGP × GPP. Expression analysis indicated that increased accumulation of AsA in pyramiding transgenic lines is due to multigene regulation in AsA biosynthesis. Substrate feeding in leaf and fruit suggested that AsA biosynthesis was mainly contributed by the d-Man/l-Gal pathway in leaves, while alternative pathways may contribute to AsA accumulation in tomato fruit. Pyramiding lines showed an enhanced light response, stress tolerance, and AsA transport capacity. Also, fruit shape, fruit size, and soluble solids were slightly affected by pyramiding. This study provides the first comprehensive analysis of gene pyramiding for ascorbate biosynthesis in tomato. SGs pyramiding promotes AsA biosynthesis, which in turn enhances light response and oxidative stress tolerance. Also, the data revealed an alternative ascorbate biosynthesis pathway between leaves and fruit of tomato.
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Affiliation(s)
- Xiaojing Li
- Key Laboratory of Protected Horticultural Engineering in Northwest, College of Horticulture, Northwest Agriculture & Forestry University, Yangling, Shaanxi 712100, China.
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan 430070, China.
| | - Jie Ye
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan 430070, China.
| | - Shoaib Munir
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan 430070, China.
| | - Tao Yang
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan 430070, China.
| | - Weifang Chen
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan 430070, China.
| | - Genzhong Liu
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan 430070, China.
| | - Wei Zheng
- HZAU Chuwei Institute of Advanced Seeds, Wuhan 430070, China.
| | - Yuyang Zhang
- Key Laboratory of Horticultural Plant Biology, Ministry of Education, Huazhong Agricultural University, Wuhan 430070, China.
- HZAU Chuwei Institute of Advanced Seeds, Wuhan 430070, China.
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33
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Badejo AA. Elevated carotenoids in staple crops: The biosynthesis, challenges and measures for target delivery. J Genet Eng Biotechnol 2019; 16:553-562. [PMID: 30733773 PMCID: PMC6353757 DOI: 10.1016/j.jgeb.2018.02.010] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2017] [Revised: 02/20/2018] [Accepted: 02/20/2018] [Indexed: 12/03/2022]
Abstract
Poverty eradication and global food security are among the targets of world leaders, most especially combating the scourge of hidden hunger. Provitamin A carotenoids cannot be synthesized de novo by human and so it must be taken as part of the diet. The deficiency of which is causing almost 6000 sights to be lost daily in most developing countries because of the monotonous starchy diets lacking substantial amount of carotenoid. Conventional breeding as well as genetic engineering have been used to increase the level of carotenoid in many staples including rice, potato, maize and cassava. While products from genetic engineering are still been subjected to strict regulatory measures preventing the delivery of the products to target consumers, some of the products from conventional breeding are already on the table of consumers. Interestingly, both technologies are crucial to tackling micronutrient deficiencies. This review discusses the role of carotenoid in human, the biosynthesis in plant and some of the staple crops that have been modified for increased carotenoid. Some measures expected of the leaders of the countries in need of these products for safe delivery to the target population after two decades is also highlighted.
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Abstract
Specialized metabolites are critical for plant–environment interactions, e.g., attracting pollinators or defending against herbivores, and are important sources of plant-based pharmaceuticals. However, it is unclear what proportion of enzyme-encoding genes play a role in specialized metabolism (SM) as opposed to general metabolism (GM) in any plant species. This is because of the diversity of specialized metabolites and the considerable number of incompletely characterized pathways responsible for their production. In addition, SM gene ancestors frequently played roles in GM. We evaluate features distinguishing SM and GM genes and build a computational model that accurately predicts SM genes. Our predictions provide candidates for experimental studies, and our modeling approach can be applied to other species that produce medicinally or industrially useful compounds. Plant specialized metabolism (SM) enzymes produce lineage-specific metabolites with important ecological, evolutionary, and biotechnological implications. Using Arabidopsis thaliana as a model, we identified distinguishing characteristics of SM and GM (general metabolism, traditionally referred to as primary metabolism) genes through a detailed study of features including duplication pattern, sequence conservation, transcription, protein domain content, and gene network properties. Analysis of multiple sets of benchmark genes revealed that SM genes tend to be tandemly duplicated, coexpressed with their paralogs, narrowly expressed at lower levels, less conserved, and less well connected in gene networks relative to GM genes. Although the values of each of these features significantly differed between SM and GM genes, any single feature was ineffective at predicting SM from GM genes. Using machine learning methods to integrate all features, a prediction model was established with a true positive rate of 87% and a true negative rate of 71%. In addition, 86% of known SM genes not used to create the machine learning model were predicted. We also demonstrated that the model could be further improved when we distinguished between SM, GM, and junction genes responsible for reactions shared by SM and GM pathways, indicating that topological considerations may further improve the SM prediction model. Application of the prediction model led to the identification of 1,220 A. thaliana genes with previously unknown functions, each assigned a confidence measure called an SM score, providing a global estimate of SM gene content in a plant genome.
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Font i Forcada C, Guajardo V, Chin-Wo SR, Moreno MÁ. Association Mapping Analysis for Fruit Quality Traits in Prunus persica Using SNP Markers. FRONTIERS IN PLANT SCIENCE 2019; 9:2005. [PMID: 30705685 PMCID: PMC6344403 DOI: 10.3389/fpls.2018.02005] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2017] [Accepted: 12/28/2018] [Indexed: 05/24/2023]
Abstract
The identification of genes involved in variation of peach fruit quality would assist breeders to create new cultivars with improved fruit quality. Peach is a genetic and genomic model within the Rosaceae. A large quantity of useful data suitable for fine mapping using Single Nucleotide Polymorphisms (SNPs) from the peach genome sequence was used in this study. A set of 94 individuals from a peach germplasm collection was phenotyped and genotyped, including local Spanish and modern cultivars maintained at the Experimental Station of Aula Dei, Spain. Phenotypic evaluation based on agronomical, pomological and fruit quality traits was performed at least 3 years. A set of 4,558 out of a total of 8,144 SNPs markers developed by the Illumina Infinium BeadArray (v1.0) technology platform, covering the peach genome, were analyzed for population structure analysis and genome-wide association studies (GWAS). Population structure analysis identified two subpopulations, with admixture within them. While one subpopulation contains only modern cultivars, the other one is formed by local Spanish and several modern cultivars from international breeding programs. To test the marker trait associations between markers and phenotypic traits, four models comprising both general linear model (GLM) and mixed linear model (MLM) were selected. The MLM approach using co-ancestry values from population structure and kinship estimates (K model) identified a maximum of 347 significant associations between markers and traits. The associations found appeared to map within the interval where many candidate genes involved in different pathways are predicted in the peach genome. These results represent a promising situation for GWAS in the identification of SNP variants associated to fruit quality traits, potentially applicable in peach breeding programs.
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D’Andrea L, Rodriguez-Concepcion M. Manipulation of Plastidial Protein Quality Control Components as a New Strategy to Improve Carotenoid Contents in Tomato Fruit. FRONTIERS IN PLANT SCIENCE 2019; 10:1071. [PMID: 31543891 PMCID: PMC6739439 DOI: 10.3389/fpls.2019.01071] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2019] [Accepted: 08/07/2019] [Indexed: 05/19/2023]
Abstract
Carotenoids such as β-carotene (pro-vitamin A) and lycopene accumulate at high levels during tomato (Solanum lycopersicum L.) fruit ripening, contributing to the characteristic color and nutritional quality of ripe tomatoes. Besides their role as pigments in chromoplast-harboring tissues such as ripe fruits, carotenoids are important for photosynthesis and photoprotection in the chloroplasts of photosynthetic tissues. Interestingly, recent work in Arabidopsis thaliana (L.) Heynh. has unveiled a critical role of chloroplast protein quality control components in the regulation of carotenoid biosynthesis. The accumulation (i.e. degradation rate) and activity (i.e. folding status) of phytoene synthase (PSY) and other Arabidopsis biosynthetic enzymes is modulated by chaperones such as Orange (OR) and Hsp70 in coordination with the stromal Clp protease complex. OR and Clp protease were recently shown to also influence PSY stability and carotenoid accumulation in tomato. Here we show how manipulating the levels of plastid-localized Hsp70 in transgenic tomato plants can also impact the accumulation of carotenoids in ripe fruit. The resulting carotenoid profile and chromoplast ultrastructure, however, are different from those obtained in tomatoes from transgenic lines with increased OR activity. These results suggest that different chaperone families target different processes related to carotenoid metabolism and accumulation during tomato ripening. We further discuss other possible targets for future manipulation in tomato based on the knowledge acquired in Arabidopsis.
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Affiliation(s)
- Lucio D’Andrea
- Centre for Research in Agricultural Genomics (CRAG) CSIC-IRTA-UAB-UB, Barcelona, Spain
| | - Manuel Rodriguez-Concepcion
- Centre for Research in Agricultural Genomics (CRAG) CSIC-IRTA-UAB-UB, Barcelona, Spain
- Consejo Superior de Investigaciones Científicas (CSIC), Barcelona, Spain
- *Correspondence: Manuel Rodriguez-Concepcion,
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Divya P, Puthusseri B, Savanur MA, Lokesh V, Neelwarne B. Effects of methyl jasmonate and carotenogenic inhibitors on gene expression and carotenoid accumulation in coriander (Coriandrum sativum L.) foliage. Food Res Int 2018; 111:11-19. [DOI: 10.1016/j.foodres.2018.04.040] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2017] [Revised: 04/15/2018] [Accepted: 04/17/2018] [Indexed: 11/26/2022]
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Ambati RR, Gogisetty D, Aswathanarayana RG, Ravi S, Bikkina PN, Bo L, Yuepeng S. Industrial potential of carotenoid pigments from microalgae: Current trends and future prospects. Crit Rev Food Sci Nutr 2018; 59:1880-1902. [PMID: 29370540 DOI: 10.1080/10408398.2018.1432561] [Citation(s) in RCA: 114] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Microalgae are rich source of various bioactive molecules such as carotenoids, lipids, fatty acids, hydrocarbons, proteins, carbohydrates, amino acids, etc. and in recent Years carotenoids from algae gained commercial recognition in the global market for food and cosmeceutical applications. However, the production of carotenoids from algae is not yet fully cost effective to compete with synthetic ones. In this context the present review examines the technologies/methods in relation to mass production of algae, cell harvesting for extraction of carotenoids, optimizing extraction methods etc. Research studies from different microalgal species such as Spirulina platensis, Haematococcus pluvialis, Dunaliella salina, Chlorella sps., Nannochloropsis sps., Scenedesmus sps., Chlorococcum sps., Botryococcus braunii and Diatoms in relation to carotenoid content, chemical structure, extraction and processing of carotenoids are discussed. Further these carotenoid pigments, are useful in various health applications and their use in food, feed, nutraceutical, pharmaceutical and cosmeceutical industries was briefly touched upon. The commercial value of algal carotenoids has also been discussed in this review. Possible recommendations for future research studies are proposed.
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Affiliation(s)
- Ranga Rao Ambati
- a Food Science and Technology Programme, Beijing Normal University-Hong Kong Baptist University United International College , Tangjiawan, Zhuhai , Guangdong , China.,b Estuarine Fisheries Research Institute , Doumen, Zhuhai , Guangdong , China.,c Department of Biotechnology , Vignan's Foundation for Science, Technology and Research (Deemed to be University) , Vadlamudi, Guntur , Andhra Pradesh , India
| | - Deepika Gogisetty
- d Department of Chemistry , Sri Chaitanya Junior College , Tenali, Guntur , Andhra Pradesh , India
| | | | - Sarada Ravi
- f Plant Cell Biotechnology Department , Central Food Technological Research Institute, (Constituent Laboratory of Council of Scientific & Industrial Research) , Mysore , Karnataka , India
| | | | - Lei Bo
- a Food Science and Technology Programme, Beijing Normal University-Hong Kong Baptist University United International College , Tangjiawan, Zhuhai , Guangdong , China
| | - Su Yuepeng
- b Estuarine Fisheries Research Institute , Doumen, Zhuhai , Guangdong , China
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Sun T, Yuan H, Cao H, Yazdani M, Tadmor Y, Li L. Carotenoid Metabolism in Plants: The Role of Plastids. MOLECULAR PLANT 2018; 11:58-74. [PMID: 28958604 DOI: 10.1016/j.molp.2017.09.010] [Citation(s) in RCA: 311] [Impact Index Per Article: 51.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2017] [Revised: 09/02/2017] [Accepted: 09/13/2017] [Indexed: 05/17/2023]
Abstract
Carotenoids are indispensable to plants and critical in human diets. Plastids are the organelles for carotenoid biosynthesis and storage in plant cells. They exist in various types, which include proplastids, etioplasts, chloroplasts, amyloplasts, and chromoplasts. These plastids have dramatic differences in their capacity to synthesize and sequester carotenoids. Clearly, plastids play a central role in governing carotenogenic activity, carotenoid stability, and pigment diversity. Understanding of carotenoid metabolism and accumulation in various plastids expands our view on the multifaceted regulation of carotenogenesis and facilitates our efforts toward developing nutrient-enriched food crops. In this review, we provide a comprehensive overview of the impact of various types of plastids on carotenoid biosynthesis and accumulation, and discuss recent advances in our understanding of the regulatory control of carotenogenesis and metabolic engineering of carotenoids in light of plastid types in plants.
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Affiliation(s)
- Tianhu Sun
- Robert W. Holley Center for Agriculture and Health, USDA-ARS, Cornell University, Ithaca, NY 14853, USA; Plant Breeding and Genetics Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA
| | - Hui Yuan
- Robert W. Holley Center for Agriculture and Health, USDA-ARS, Cornell University, Ithaca, NY 14853, USA; Plant Breeding and Genetics Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA
| | - Hongbo Cao
- Robert W. Holley Center for Agriculture and Health, USDA-ARS, Cornell University, Ithaca, NY 14853, USA; College of Horticulture, Hebei Agricultural University, Baoding, Hebei 071001, China
| | - Mohammad Yazdani
- Robert W. Holley Center for Agriculture and Health, USDA-ARS, Cornell University, Ithaca, NY 14853, USA; Plant Breeding and Genetics Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA
| | - Yaakov Tadmor
- Plant Science Institute, Israeli Agricultural Research Organization, Newe Yaar Research Center, P.O. Box 1021, Ramat Yishai 30095, Israel
| | - Li Li
- Robert W. Holley Center for Agriculture and Health, USDA-ARS, Cornell University, Ithaca, NY 14853, USA; Plant Breeding and Genetics Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853, USA.
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Sankari M, Rao PR, Hemachandran H, Pullela PK, Doss C GP, Tayubi IA, Subramanian B, Gothandam KM, Singh P, Ramamoorthy S. Prospects and progress in the production of valuable carotenoids: Insights from metabolic engineering, synthetic biology, and computational approaches. J Biotechnol 2018; 266:89-101. [DOI: 10.1016/j.jbiotec.2017.12.010] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2017] [Revised: 11/09/2017] [Accepted: 12/10/2017] [Indexed: 02/01/2023]
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Gao Y, Wei W, Zhao X, Tan X, Fan Z, Zhang Y, Jing Y, Meng L, Zhu B, Zhu H, Chen J, Jiang CZ, Grierson D, Luo Y, Fu DQ. A NAC transcription factor, NOR-like1, is a new positive regulator of tomato fruit ripening. HORTICULTURE RESEARCH 2018; 5:75. [PMID: 30588320 PMCID: PMC6303401 DOI: 10.1038/s41438-018-0111-5] [Citation(s) in RCA: 116] [Impact Index Per Article: 19.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2018] [Revised: 12/10/2018] [Accepted: 12/11/2018] [Indexed: 05/18/2023]
Abstract
Ripening of the model fruit tomato (Solanum lycopersicum) is controlled by a transcription factor network including NAC (NAM, ATAF1/2, and CUC2) domain proteins such as No-ripening (NOR), SlNAC1, and SlNAC4, but very little is known about the NAC targets or how they regulate ripening. Here, we conducted a systematic search of fruit-expressed NAC genes and showed that silencing NOR-like1 (Solyc07g063420) using virus-induced gene silencing (VIGS) inhibited specific aspects of ripening. Ripening initiation was delayed by 14 days when NOR-like1 function was inactivated by CRISPR/Cas9 and fruits showed obviously reduced ethylene production, retarded softening and chlorophyll loss, and reduced lycopene accumulation. RNA-sequencing profiling and gene promoter analysis suggested that genes involved in ethylene biosynthesis (SlACS2, SlACS4), color formation (SlGgpps2, SlSGR1), and cell wall metabolism (SlPG2a, SlPL, SlCEL2, and SlEXP1) are direct targets of NOR-like1. Electrophoretic mobility shift assays (EMSA), chromatin immunoprecipitation-quantitative PCR (ChIP-qPCR), and dual-luciferase reporter assay (DLR) confirmed that NOR-like1 bound to the promoters of these genes both in vitro and in vivo, and activated their expression. Our findings demonstrate that NOR-like1 is a new positive regulator of tomato fruit ripening, with an important role in the transcriptional regulatory network.
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Affiliation(s)
- Ying Gao
- Laboratory of Fruit Biology, College of Food Science & Nutritional Engineering, China Agricultural University, 100083 Beijing, China
| | - Wei Wei
- College of Horticulture, South China Agricultural University, 510642 Guangzhou, China
| | - Xiaodan Zhao
- College of Food Science, Beijing Technology and Business University, 100037 Beijing, China
| | - Xiaoli Tan
- College of Horticulture, South China Agricultural University, 510642 Guangzhou, China
| | - Zhongqi Fan
- College of Horticulture, South China Agricultural University, 510642 Guangzhou, China
| | - Yiping Zhang
- Laboratory of Fruit Biology, College of Food Science & Nutritional Engineering, China Agricultural University, 100083 Beijing, China
| | - Yuan Jing
- Laboratory of Fruit Biology, College of Food Science & Nutritional Engineering, China Agricultural University, 100083 Beijing, China
| | - Lanhuan Meng
- Laboratory of Fruit Biology, College of Food Science & Nutritional Engineering, China Agricultural University, 100083 Beijing, China
| | - Benzhong Zhu
- Laboratory of Fruit Biology, College of Food Science & Nutritional Engineering, China Agricultural University, 100083 Beijing, China
| | - Hongliang Zhu
- Laboratory of Fruit Biology, College of Food Science & Nutritional Engineering, China Agricultural University, 100083 Beijing, China
| | - Jianye Chen
- College of Horticulture, South China Agricultural University, 510642 Guangzhou, China
| | - Cai-Zhong Jiang
- Department of Plant Sciences, University of California, Davis, CA 95616 USA
- Crops Pathology and Genetics Research Unit, United States Department of Agriculture, Agricultural Research Service, Davis, CA 95616 USA
| | - Donald Grierson
- Plant Sciences Division, School of Biosciences, University of Nottingham, Sutton Bonington Campus, Loughborough, LE12 5RD UK
- College of Agriculture & Biotechnology, Zhejiang University, 310058 Hangzhou, China
| | - Yunbo Luo
- Laboratory of Fruit Biology, College of Food Science & Nutritional Engineering, China Agricultural University, 100083 Beijing, China
| | - Da-Qi Fu
- Laboratory of Fruit Biology, College of Food Science & Nutritional Engineering, China Agricultural University, 100083 Beijing, China
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Okitsu N, Noda N, Chandler S, Tanaka Y. Flower Color and Its Engineering by Genetic Modification. HANDBOOK OF PLANT BREEDING 2018. [DOI: 10.1007/978-3-319-90698-0_3] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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Watanabe K, Oda-Yamamizo C, Sage-Ono K, Ohmiya A, Ono M. Overexpression of carotenogenic genes in the Japanese morning glory Ipomoea ( Pharbitis) nil. PLANT BIOTECHNOLOGY (TOKYO, JAPAN) 2017; 34:177-185. [PMID: 31275025 PMCID: PMC6543692 DOI: 10.5511/plantbiotechnology.17.1016a] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2017] [Accepted: 10/16/2017] [Indexed: 06/09/2023]
Abstract
Japanese morning glory, Ipomoea nil, has several coloured flowers except yellow, because it can accumulate only trace amounts of carotenoids in the petal. To make the petal yellow with carotenoids, we introduced five carotenogenic genes (geranylgeranyl pyrophosphate synthase, phytoene synthase, lycopene β-cyclase and β-ring hydroxylase from Ipomoea obscura var. lutea and bacterial phytoene desaturase from Pantoea ananatis) to white-flowered I. nil cv. AK77 with a petal-specific promoter by Rhizobium (Agrobacterium)-mediated transformation method. We succeeded to produce transgenic plants overexpressing carotenogenic genes. In the petal of the transgenic plants, mRNA levels of the carotenogenic genes were 10 to 1,000 times higher than those of non-transgenic control. The petal colour did not change visually; however, carotenoid concentration in the petal was increased up to about ten-fold relative to non-transgenic control. Moreover, the components of carotenoids in the petal were diversified, in particular, several β-carotene derivatives, such as zeaxanthin and neoxanthin, were newly synthesized. This is the first report, to our knowledge, of changing the component and increasing the amount of carotenoid in petals that lack ability to biosynthesize carotenoids.
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Affiliation(s)
- Kenta Watanabe
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan
| | - Chihiro Oda-Yamamizo
- Institute of Vegetable and Floriculture Science, National Agriculture and Food Research Organization, 2-1 Fujimoto, Tsukuba,Ibaraki 305-0852, Japan
| | - Kimiyo Sage-Ono
- Gene Research Center, Tsukuba Plant Innovation Research Center (T-PIRC), Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan
| | - Akemi Ohmiya
- Institute of Vegetable and Floriculture Science, National Agriculture and Food Research Organization, 2-1 Fujimoto, Tsukuba,Ibaraki 305-0852, Japan
| | - Michiyuki Ono
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan
- Gene Research Center, Tsukuba Plant Innovation Research Center (T-PIRC), Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki 305-8572, Japan
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Chitchumroonchokchai C, Diretto G, Parisi B, Giuliano G, Failla ML. Potential of golden potatoes to improve vitamin A and vitamin E status in developing countries. PLoS One 2017; 12:e0187102. [PMID: 29117188 PMCID: PMC5678870 DOI: 10.1371/journal.pone.0187102] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2017] [Accepted: 10/15/2017] [Indexed: 12/26/2022] Open
Abstract
Potato (Solanum tuberosum L.) is the third most widely consumed plant food by humans. Its tubers are rich in starch and vitamin C, but have low or null levels of essential nutrients such as provitamin A and vitamin E. Transformation of potato with a bacterial mini-pathway for β-carotene in a tuber-specific manner results in a “golden” potato (GP) tuber phenotype resulting from accumulation of provitamin A carotenoids (α- and β-carotene) and xanthophylls. Here, we investigated the bioaccessibility of carotenoids and vitamin E as α-tocopherol (αTC) in boiled wild type and golden tubers using in vitro digestion. Golden tubers contained up to 91 μg provitamin A carotenes (PAC)/g D, increased levels of xanthophylls, phytoene and phytofluene, as well as up to 78 μg vitamin E/g DW. Cubes from wild type and GP tubers were boiled and subjected to simulated digestion to estimate bioaccessibility of carotenoids and αTC. Retention in boiled GPs exceeded 80% for β-carotene (βC), α-carotene (αC), lutein, phytoene ± and αTC, but less than 50% for phytofluene. The efficiency of partitioning of total βC, αC, E-lutein, phytoene, phytofluene and αTC in the mixed micelle fraction during small intestinal digestion was influenced by genotype, tuber content and hydrophobicity. Apical uptake of the compounds that partitioned in mixed micelles by monolayers of human intestinal Caco-2 cells during incubation for 4h was 14–20% for provitamin A and xanthophylls, 43–45% for phytoene, 23–27% for phytofluene, and 53% for αTC. These results suggest that a 150 g serving of boiled golden potatoes has the potential to contribute 42% and 23% of the daily requirement of retinol activity equivalents (RAE), as well as 34 and 17% of the daily vitamin E requirement for children and women of reproductive age, respectively.
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Affiliation(s)
| | - Gianfranco Diretto
- Italian National Agency for New Technologies, Energy and Sustainable Development (ENEA), Casaccia Research Center, Rome, Italy
| | - Bruno Parisi
- Council for Agricultural Research and Economics (CREA)/Research Center for Cereal and Industrial Crops, Bologna, Italy
| | - Giovanni Giuliano
- Italian National Agency for New Technologies, Energy and Sustainable Development (ENEA), Casaccia Research Center, Rome, Italy
- * E-mail: (MLF); (GG)
| | - Mark L. Failla
- Human Nutrition Program, The Ohio State University, Columbus, Ohio, United States of America
- * E-mail: (MLF); (GG)
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Sulli M, Mandolino G, Sturaro M, Onofri C, Diretto G, Parisi B, Giuliano G. Molecular and biochemical characterization of a potato collection with contrasting tuber carotenoid content. PLoS One 2017; 12:e0184143. [PMID: 28898255 PMCID: PMC5595298 DOI: 10.1371/journal.pone.0184143] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2017] [Accepted: 08/18/2017] [Indexed: 12/26/2022] Open
Abstract
After wheat and rice, potato is the third most important staple food worldwide. A collection of ten tetraploid (Solanum tuberosum) and diploid (S. phureja and S. chacoense) genotypes with contrasting carotenoid content was subjected to molecular characterization with respect to candidate carotenoid loci and metabolic profiling using LC-HRMS. Irrespective of ploidy and taxonomy, tubers of these genotypes fell into three groups: yellow-fleshed, characterized by high levels of epoxy-xanthophylls and xanthophyll esters and by the presence of at least one copy of a dominant allele of the β-Carotene Hydroxylase 2 (CHY2) gene; white-fleshed, characterized by low carotenoid levels and by the presence of recessive chy2 alleles; and orange-fleshed, characterized by high levels of zeaxanthin but low levels of xanthophyll esters, and homozygosity for a Zeaxanthin Epoxidase (ZEP) recessive allele. Novel CHY2 and ZEP alleles were identified in the collection. Multivariate analysis identified several groups of co-regulated non-polar compounds, and resulted in the grouping of the genotypes according to flesh color, suggesting that extensive cross-talk exists between the carotenoid pathway and other metabolite pathways in tubers. Postharvest traits like tuber dormancy and weight loss during storage showed little correlation with tuber carotenoid content, with the exception of zeaxanthin and its esters. Other tuber metabolites, such as glucose, monogalactosyldiacyglycerol (a glycolipid), or suberin precursors, showed instead significant correlations with both traits.
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Affiliation(s)
- Maria Sulli
- ENEA, Casaccia Research Center, Via Anguillarese 301, Roma, Italy
- Scuola Superiore S. Anna, Piazza Martiri della Libertà 33, Pisa, Italy
| | - Giuseppe Mandolino
- CREA-Centro Cerealicoltura e Colture Industriali, Sede di Bologna, Via di Corticella 133, Bologna, Italy
| | - Monica Sturaro
- CREA- Centro Cerealicoltura e Colture Industriali, Sede di Bergamo, Via Stezzano 24, Bergamo, Italy
| | - Chiara Onofri
- CREA-Centro Cerealicoltura e Colture Industriali, Sede di Bologna, Via di Corticella 133, Bologna, Italy
| | | | - Bruno Parisi
- CREA-Centro Cerealicoltura e Colture Industriali, Sede di Bologna, Via di Corticella 133, Bologna, Italy
| | - Giovanni Giuliano
- ENEA, Casaccia Research Center, Via Anguillarese 301, Roma, Italy
- * E-mail:
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Provitamin A biofortification of crop plants: a gold rush with many miners. Curr Opin Biotechnol 2017; 44:169-180. [DOI: 10.1016/j.copbio.2017.02.001] [Citation(s) in RCA: 103] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2016] [Revised: 01/30/2017] [Accepted: 02/01/2017] [Indexed: 01/11/2023]
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Maoka T, Otani M, Khan MZ, Takemura M, Hattan JI, Misawa N. Novel carotenoids produced on the interaction of the foreign carotenoid ketolase CrtW and endogenous epoxycarotenoids unique to sweetpotato tubers. Tetrahedron Lett 2016. [DOI: 10.1016/j.tetlet.2016.09.037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Che P, Zhao ZY, Glassman K, Dolde D, Hu TX, Jones TJ, Gruis DF, Obukosia S, Wambugu F, Albertsen MC. Elevated vitamin E content improves all-trans β-carotene accumulation and stability in biofortified sorghum. Proc Natl Acad Sci U S A 2016; 113:11040-5. [PMID: 27621466 PMCID: PMC5047201 DOI: 10.1073/pnas.1605689113] [Citation(s) in RCA: 73] [Impact Index Per Article: 9.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Micronutrient deficiencies are common in locales where people must rely upon sorghum as their staple diet. Sorghum grain is seriously deficient in provitamin A (β-carotene) and in the bioavailability of iron and zinc. Biofortification is a process to improve crops for one or more micronutrient deficiencies. We have developed sorghum with increased β-carotene accumulation that will alleviate vitamin A deficiency among people who rely on sorghum as their dietary staple. However, subsequent β-carotene instability during storage negatively affects the full utilization of this essential micronutrient. We determined that oxidation is the main factor causing β-carotene degradation under ambient conditions. We further demonstrated that coexpression of homogentisate geranylgeranyl transferase (HGGT), stacked with carotenoid biosynthesis genes, can mitigate β-carotene oxidative degradation, resulting in increased β-carotene accumulation and stability. A kinetic study of β-carotene degradation showed that the half-life of β-carotene is extended from less than 4 wk to 10 wk on average with HGGT coexpression.
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Affiliation(s)
- Ping Che
- DuPont Pioneer, Johnston, IA 50131
| | | | | | | | | | | | | | - Silas Obukosia
- Africa Harvest Biotech Foundation International, Nairobi 00621, Kenya
| | - Florence Wambugu
- Africa Harvest Biotech Foundation International, Nairobi 00621, Kenya
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Ralley L, Schuch W, Fraser PD, Bramley PM. Genetic modification of tomato with the tobacco lycopene β-cyclase gene produces high β-carotene and lycopene fruit. Z NATURFORSCH C 2016; 71:295-301. [PMID: 27487494 DOI: 10.1515/znc-2016-0102] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2016] [Accepted: 07/06/2016] [Indexed: 12/16/2023]
Abstract
Transgenic Solanum lycopersicum plants expressing an additional copy of the lycopene β-cyclase gene (LCYB) from Nicotiana tabacum, under the control of the Arabidopsis polyubiquitin promoter (UBQ3), have been generated. Expression of LCYB was increased some 10-fold in ripening fruit compared to vegetative tissues. The ripe fruit showed an orange pigmentation, due to increased levels (up to 5-fold) of β-carotene, with negligible changes to other carotenoids, including lycopene. Phenotypic changes in carotenoids were found in vegetative tissues, but levels of biosynthetically related isoprenoids such as tocopherols, ubiquinone and plastoquinone were barely altered. Transformants showed tolerance to the bleaching herbicide β-cyclase inhibitor, 2-(4-chlorophenylthio) triethylamine. The phenotype was inherited for at least three generations.
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Xu J, Li Z, Yang H, Yang X, Chen C, Li H. Genetic Diversity and Molecular Evolution of a Violaxanthin De-epoxidase Gene in Maize. Front Genet 2016; 7:131. [PMID: 27507987 PMCID: PMC4960258 DOI: 10.3389/fgene.2016.00131] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2016] [Accepted: 07/07/2016] [Indexed: 12/30/2022] Open
Abstract
Violaxanthin de-epoxidase (VDE) has a critical role in the carotenoid biosynthesis pathway, which is involved in protecting the photosynthesis apparatus from damage caused by excessive light. Here, a VDE gene in maize, ZmVDE1, was cloned and shown to have functional domains in common with the gramineous VDE protein. Candidate gene association analysis indicated that no polymorphic sites in ZmVDE1 were significant association with any of the examined carotenoid-related traits at P = 0.05 in an association panel containing 155 maize inbred lines. Nucleotide diversity analysis of VDE1 in maize and teosinte indicated that its exon had less genetic variation, consistent with the conserved function of VDE1 in plants. In addition, dramatically reduced nucleotide diversity, fewer haplotypes and a significantly negative parameter deviation for Tajima’s D test of ZmVDE1 in maize and teosinte suggested that a potential selective force had acted across the ZmVDE1 locus. We further identified a 4.2 Mb selective sweep with low recombination surrounding the ZmVDE1 locus that resulted in severely reduced nucleotide diversity on chromosome 2. Collectively, natural selection and the conserved domains of ZmVDE1 might show an important role in the xanthophyll cycle of the carotenoid biosynthesis pathway.
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Affiliation(s)
- Jing Xu
- State Key Laboratory of Crop Biology, Shandong Key Laboratory of Crop Biology, Shandong Agricultural UniversityTai'an, China; Key Laboratory of Crop Genomics and Genetic Improvement, National Maize Improvement Center of China, China Agricultural UniversityBeijing, China
| | - Zhigang Li
- Key Laboratory of Crop Genomics and Genetic Improvement, National Maize Improvement Center of China, China Agricultural University Beijing, China
| | - Haorui Yang
- Key Laboratory of Crop Genomics and Genetic Improvement, National Maize Improvement Center of China, China Agricultural University Beijing, China
| | - Xiaohong Yang
- Key Laboratory of Crop Genomics and Genetic Improvement, National Maize Improvement Center of China, China Agricultural University Beijing, China
| | - Cuixia Chen
- State Key Laboratory of Crop Biology, Shandong Key Laboratory of Crop Biology, Shandong Agricultural University Tai'an, China
| | - Hui Li
- School of Biological Science and Technology, University of Jinan Jinan, China
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