Non-denitrifying polyphosphate accumulating organisms obviate requirement for anaerobic condition

Simultaneous decarbonization and phosphorus removal by Tetrasphaera elongata with glucose as carbon source under aerobic conditions

Previous researches have recognized the vital role of Tetrasphaera elongata in enhanced biological phosphorus removal systems, but the underlying mechanisms remain under-investigated. To address this issue, this study investigated the metabolic characteristics of Tetrasphaera elongata when utilizing glucose as the sole carbon source. Results showed under aerobic conditions, Tetrasphaera elongata exhibited a glucose uptake rate of 136.6 mg/(L·h) and a corresponding phosphorus removal rate of 8.6 mg P/(L·h). Upregulations of genes associated with the glycolytic pathway and oxidative phosphorylation were observed. Noteworthily, the genes encoding the two-component sensor histidine kinase and response regulator transcription factor exhibited a remarkable 28.3 and 27.4-fold increase compared with the group without glucose. Since these genes play a pivotal role in phosphate-specific transport systems, collectively, these findings shed light on a potential mechanism for simultaneous decarbonization and phosphorus removal by Tetrasphaera elongata under aerobic conditions, providing fresh insights into phosphorus removal from wastewaters.

Two new clades recovered at high temperatures provide novel phylogenetic and genomic insights into Candidatus Accumulibacter

Candidatus Accumulibacter, a key genus of polyphosphate-accumulating organisms, plays key roles in lab- and full-scale enhanced biological phosphorus removal (EBPR) systems. A total of 10 high-quality Ca. Accumulibacter genomes were recovered from EBPR systems operated at high temperatures, providing significantly updated phylogenetic and genomic insights into the Ca. Accumulibacter lineage. Among these genomes, clade IIF members SCELSE-3, SCELSE-4, and SCELSE-6 represent the to-date known genomes encoding a complete denitrification pathway, suggesting that Ca. Accumulibacter alone could achieve complete denitrification. Clade IIC members SSA1, SCUT-1, SCELCE-2, and SCELSE-8 lack the entire set of denitrifying genes, representing to-date known non-denitrifying Ca. Accumulibacter. A pan-genomic analysis with other Ca. Accumulibacter members suggested that all Ca. Accumulibacter likely has the potential to use dicarboxylic amino acids. Ca. Accumulibacter aalborgensis AALB and Ca. Accumulibacter affinis BAT3C720 seemed to be the only two members capable of using glucose for EBPR. A heat shock protein Hsp20 encoding gene was found exclusively in genomes recovered at high temperatures, which was absent in clades IA, IC, IG, IIA, IIB, IID, IIG, and II-I members. High transcription of this gene in clade IIC members SCUT-2 and SCUT-3 suggested its role in surviving high temperatures for Ca. Accumulibacter. Ambiguous clade identity was observed for newly recovered genomes (SCELSE-9 and SCELSE-10). Five machine learning models were developed using orthogroups as input features. Prediction results suggested that they belong to a new clade (IIK). The phylogeny of Ca. Accumulibacter was re-evaluated based on the laterally derived polyphosphokinase 2 gene, showing improved resolution in differentiating different clades.

Enhanced Bio-P removal: Past, present, and future - A comprehensive review

Excess amounts of phosphorus (P) and nitrogen (N) from anthropogenic activities such as population growth, municipal and industrial wastewater discharges, agriculture fertilization and storm water runoffs, have affected surface water chemistry, resulting in episodes of eutrophication. Enhanced biological phosphorus removal (EBPR) based treatment processes are an economical and environmentally friendly solution to address the present environmental impacts caused by excess P present in municipal discharges. EBPR practices have been researched and operated for more than five decades worldwide, with promising results in decreasing orthophosphate to acceptable levels. The advent of molecular tools targeting bacterial genomic deoxyribonucleic acid (DNA) has also helped us reveal the identity of potential polyphosphate-accumulating organisms (PAO) and denitrifying PAO (DPAO) responsible for the success of EBPR. Integration of process engineering and environmental microbiology has provided much-needed confidence to the wastewater community for the successful implementation of EBPR practices around the globe. Despite these successes, the process of EBPR continues to evolve in terms of its microbiology and application in light of other biological processes such as anaerobic ammonia oxidation and on-site carbon capture. This review provides an overview of the history of EBPR, discusses different operational parameters critical for the successful operation of EBPR systems, reviews current knowledge of EBPR microbiology, the influence of PAO/DPAO on the disintegration of microbial communities, stoichiometry, EBPR clades, current practices, and upcoming potential innovations.

Global warming readiness: Feasibility of enhanced biological phosphorus removal at 35 °C

Recent research has shown enhanced biological phosphorus removal (EBPR) from municipal wastewater at warmer temperatures around 30 °C to be achievable in both laboratory-scale reactors and full-scale treatment plants. In the context of a changing climate, the feasibility of EBPR at even higher temperatures is of interest. We operated two lab-scale EBPR sequencing batch reactors for > 300 days at 30 °C and 35 °C, respectively, and followed the dynamics of the communities of polyphosphate accumulating organisms (PAOs) and competing glycogen accumulating organisms (GAOs) using a combination of 16S rRNA gene metabarcoding, quantitative PCR and fluorescence in situ hybridization analyses. Stable and nearly complete phosphorus (P) removal was achieved at 30 °C; similarly, long term P removal was stable at 35 °C with effluent PO₄^3-_P concentrations < 0.5 mg/L on half of all monitored days. Diverse and abundant Candidatus Accumulibacter amplicon sequence variants were closely related to those found in temperate environments, suggesting that EBPR at this temperature does not require a highly specialized PAO community. A slow-feeding strategy effectively limited the carbon uptake rates of GAOs, allowing PAOs to outcompete GAOs at both temperatures. Candidatus Competibacter was the main GAO, along with cluster III Defluviicoccus members. These organisms withstood the slow-feeding regime, suggesting that their bioenergetic characteristics of carbon uptake differ from those of their tetrad-forming relatives. Comparative cycle studies revealed higher carbon and P cycling activity of Ca. Accumulibacter when the temperature was increased from 30 °C to 35 °C, implying that the lowered P removal performance at 35 °C was not a direct effect of temperature, but a result of higher metabolic rates of carbon (and/or P) utilization of PAOs and GAOs, the resultant carbon deficiency, and escalated community competition. An increase in the TOC-to-PO₄^3--P ratio (from 25:1 to 40:1) effectively eased the carbon deficiency and benefited PAOs. In general, a slow-feeding strategy and sufficiently high carbon input benefited a high and stable EBPR at 35 °C, representing basic conditions suitable for full-scale treatment plants experiencing higher water temperatures.

Glycine adversely affects enhanced biological phosphorus removal

Enhanced biological phosphorus removal (EBPR) is used extensively in full-scale wastewater treatment plants for the removal of phosphorus. Despite previous evidence showing that glycine is a carbon source for a certain lineage of polyphosphate accumulating organisms (PAOs) such as Tetrasphaera, it is still unknown whether glycine can support EBPR. We observed an overall adverse effect of glycine on EBPR using activated sludge from both full-scale wastewater treatment plants and lab-scale reactors harboring distant and diverse PAOs and glycogen accumulating organisms (GAOs), including Candidatus Accumulibacter, Thiothrix, Tetrasphaera, Dechloromonas, Ca. Competibacter, and Defluviicoccus, among others. Glycine induced phosphorus (P) release under anaerobic conditions without being effectively taken up by cells. The induced P release rate correlated with glycine concentration in the range of 10 to 50 mg C/L. PAOs continued to release P in the presence of glycine under aerobic conditions without any evident P uptake. Under mixed carbon conditions, the occurrence of glycine did not seem to affect acetate uptake; however, it significantly reduced the rate of P uptake in the aerobic phase. Overall, glycine did not appear to be an effective carbon source for a majority of PAOs and GAOs in full-scale and lab-scale systems, and neither did other community members utilize glycine under anaerobic or aerobic conditions. Metatranscriptomic analysis showed the transcription of glycine cleavage T, P and H protein genes, but not of the L protein or the downstream genes in the glycine cleavage pathway, suggesting barriers to metabolizing glycine. The high transcription of a gene encoding a drug/metabolite transporter suggests a potential efflux mechanism, where glycine transported into the cells is in turn exported at the expense of ATP, resulting in P release without affecting the glycine concentration in solution. The ability of glycine to induce P release without cellular uptake suggests a way to effectively recover P from P-enriched waste sludge.

Enrichment of phosphate-accumulating organisms (PAOs) in a microfluidic model biofilm system by mimicking a typical aerobic granular sludge feast/famine regime

Wastewater treatment using aerobic granular sludge has gained increasing interest due to its advantages compared to conventional activated sludge. The technology allows simultaneous removal of organic carbon, nitrogen, and phosphorus in a single reactor system and is independent of space-intensive settling tanks. However, due to the microscale, an analysis of processes and microbial population along the radius of granules is challenging. Here, we introduce a model system for aerobic granular sludge on a small scale by using a machine-assisted microfluidic cultivation platform. With an implemented logic module that controls solenoid valves, we realized alternating oxic hunger and anoxic feeding phases for the biofilms growing within. Sampling during ongoing anoxic cultivation directly from the cultivation channel was achieved with a robotic sampling device. Analysis of the biofilms was conducted using optical coherence tomography, fluorescence in situ hybridization, and amplicon sequencing. Using this setup, it was possible to significantly enrich the percentage of polyphosphate-accumulating organisms (PAO) belonging to the family Rhodocyclaceae in the community compared to the starting inoculum. With the aid of this miniature model system, it is now possible to investigate the influence of a multitude of process parameters in a highly parallel way to understand and efficiently optimize aerobic granular sludge-based wastewater treatment systems.

Key points

• Development of a microfluidic model to study EBPR.

• Feast-famine regime enriches polyphosphate-accumulating organisms (PAOs).

• Microfluidics replace sequencing batch reactors for aerobic granular sludge research.

Recovery of Phosphorus in Wastewater in the Form of Polyphosphates: A Review

As non-renewable resource, the recovery and utilization of phosphorus from wastewater is an enduring topic. Stimulated by the advances in research on polyphosphates (polyP) as well as the development of Enhanced Biological Phosphorus Removal (EBPR) technology to achieve the efficient accumulation of polyP via polyphosphate accumulating organisms (PAOs), a novel phosphorus removal strategy is considered with promising potential for application in real wastewater treatment processes. This review mainly focuses on the mechanism of phosphorus aggregation in the form of polyP during the phosphate removal process. Further discussion about the reuse of polyP with different chain lengths is provided herein so as to suggest possible application pathways for this biosynthetic product.

Critical Review of Polyphosphate and Polyphosphate Accumulating Organisms for Agricultural Water Quality Management

Despite ongoing management efforts, phosphorus (P) loading from agricultural landscapes continues to impair water quality. Wastewater treatment research has enhanced our knowledge of microbial mechanisms influencing P cycling, especially regarding microbes known as polyphosphate accumulating organisms (PAOs) that store P as polyphosphate (polyP) under oxic conditions and release P under anoxic conditions. However, there is limited application of PAO research to reduce agricultural P loading and improve water quality. Herein, we conducted a meta-analysis to identify articles in Web of Science on polyP and its use by PAOs across five disciplines (i.e., wastewater treatment, terrestrial, freshwater, marine, and agriculture). We also summarized research that provides preliminary support for PAO-mediated P cycling in natural habitats. Terrestrial, freshwater, marine, and agriculture disciplines had fewer polyP and PAO articles compared to wastewater treatment, with agriculture consistently having the least. Most meta-analysis articles did not overlap disciplines. We found preliminary support for PAOs in natural habitats and identified several knowledge gaps and research opportunities. There is an urgent need for interdisciplinary research linking PAOs, polyP, and oxygen availability with existing knowledge of P forms and cycling mechanisms in natural and agricultural environments to improve agricultural P management strategies and achieve water quality goals.

Recent advances in understanding the ecophysiology of enhanced biological phosphorus removal

Enhanced biological phosphorus removal (EBPR) is an efficient, cost-effective, and sustainable method for removing excess phosphorus from wastewater. Polyphosphate accumulating organisms (PAOs) exhibit a unique physiology alternating between anaerobic conditions for uptake of carbon substrates and aerobic or anoxic conditions for phosphorus uptake. The implementation of high-throughput sequencing technologies and advanced molecular tools along with biochemical characterization has provided many new perspectives on the EBPR process. These approaches have helped identify a wide range of carbon substrates and electron acceptors utilized by PAOs that in turn influence interactions with microbial community members and determine overall phosphorus removal efficiency. In this review, we systematically discuss the microbial diversity and metabolic response to a range of environmental conditions and process control strategies in EBPR.

Biological nitrogen and phosphorus removal by a phosphorus-accumulating bacteria Acinetobacter sp. strain C-13 with the ability of heterotrophic nitrification-aerobic denitrification

Strain C-13, identified as an Acinetobacter sp. by homology searches, exhibited efficient simultaneous heterotrophic nitrification-aerobic denitrification phosphorus removal (SNDPR) abilities by nitrogen balance analysis and further confirmation of successful amplification of functional genes ppk, napA, and nirS. In addition, strain C-13 could utilize NH₄⁺-N, NO₃^--N, and NO₂^--N as nitrogen sources, among which NH₄⁺-N was indicated to be an excellent nitrogen source for assimilation and heterotrophic nitrification. Besides, the optimum conditions for nutrient removal were determined as follows: sodium acetate as the sole carbon source, C/N/P ratio of 100/10/2, pH = 7.5, and temperature of 30 °C. Meanwhile, the strain also showed the traditional features, such as release and the excess uptake of phosphate under anaerobic/aerobic conditions, with the highest phosphorus content of 5.01% after cultivation. Strain C-13 presents promising prospects for application in biologicalnutrient removal in wastewater treatment.

The synergy of porous substrates and functional genera for efficient nutrients removal at low temperature in a pilot-scale two-stage tidal flow constructed wetland

A pilot-scale two-stage tidal flow constructed wetland (TFCW) with working volume of 0.46 m³/d packing with shale ceramsite (SC) and activated alumina (AA) was constructed (named as SC-AA-TFCW) for nutrients removal at low temperature (<15 °C). SC-AA-TFCW achieved stable removals of 78.1% nitrogen and 98.3% phosphorous. SC-TFCW contributed to 55.2% of organics and 85.6% of particulate phosphorous removal. Among 17 denitrifiers, the absolute abundance of aerobic denitrification bacteria (ADNB) was highest, followed by facultative anaerobic denitrification bacteria (FADNB) and autotrophic denitrification bacteria (AUDNB). Nitrogen assimilating into organic nitrogen, dissimilatory and assimilatory nitrate reduction and complete denitrification may be main nitrogen metabolic pathways. Some ADNB (e. g. Zoogloea, Pseudomonas and Acidovorax) showed positive interactions with various key functional genes related to nutrients removal. Dissolved oxygen and reducing elements were main environmental factors in changing ADNB compositions. This study highlights the importance of ADNB and their synergy to porous substrates in SC-AA-TFCW.

Long-term simulation of a full-scale EBPR plant with a novel metabolic-ASM model and its use as a diagnostic tool

This study evaluates the predictive capacity of the META-ASM model, a new integrated metabolic activated sludge model, in describing the long-term performance of a full-scale enhanced biological phosphorus removal (EBPR) system that suffers from inconsistent performance. In order to elucidate the causes of EBPR upsets and troubleshoot the process accordingly, the META-ASM model was tested as an operational diagnostic tool in a 1336-day long-term dynamic simulation, while its performance was compared with the ASM-inCTRL model, a version based on the Barker & Dold model. Overall, the predictions obtained with the META-ASM without changing default parameters were more reliable and effective at describing the active biomass of polyphosphate accumulating organisms (PAOs) and the dynamics of their storage polymers. The primary causes of the EBPR upsets were the high aerobic hydraulic retention times (HRTs) and low organic loading rates (OLRs) of the plant, which led to periods of starvation. The impact of these factors on EBPR performance were only identified with the META-ASM model. Furthermore, the first signs of process upsets were predicted by variations in the aerobic PAO maintenance rates, suggesting that the META-ASM model has potential to provide an early warning of process upset. The simulation of a new viable operational strategy indicated that troubleshooting the process could be achieved by reducing the aerated volume by switching off air in the first half of the aeration tank. In this new strategy, the META-ASM model predicted a simultaneous improvement in the biological phosphorus (P) and nitrogen (N) removal due to the enhancement of the hydrolysis and fermentation of the mixed liquor sludge in the new unaerated zone, which increased the availability of volatile fatty acids (VFAs) for PAOs. This study demonstrates that the META-ASM model is a powerful operational diagnostic tool for EBPR systems, capable of predicting and mitigating upsets, optimising performance and evaluating new process designs.

Operational impacts of heavy metals on activated sludge systems: the need for improved monitoring

Biological nutrient removal is highly reliant on maintaining a heterogeneous, balanced, and metabolically active microbial community that can adapt to the fluctuating composition of influent wastewater and encompassing environmental conditions. Maintaining this balance can be challenging in municipal wastewater systems that sporadically receive wastewater from industrial facilities due to the impact of heavy metals and other contaminants on the microbial ecology of the activated sludge. A thorough understanding of the impacts of heavy metals on activated sludge and of practical monitoring options is needed to support decision-making at the wastewater utility level. This paper is divided into two parts. In the first part, the review explains what happens when heavy metals interact with activated sludge systems by highlighting biosorption and bioaccumulation processes, and when an activated sludge system switches from bioaccumulation to toxic shock. Here, it also summarizes the impacts of heavy metal exposure on plant performance. In the second part, the review summarizes practical approaches that can be used at the plant outside the realm of traditional toxicological bioassays testing to determine the possible impacts of influent heavy metal concentrations on the BNR process. These approaches include the following: monitoring operational parameters for major shifts; respirometry; microscopy; ATP; chemical analyses of heavy metals with a focus on synergistic impacts and inhibitory limits; and other novel approaches, such as EPS chemical analyses, molecular techniques, and quorum sensing.

Sludge alkaline fermentation enhanced anaerobic- multistage anaerobic/oxic (A-MAO) process to treat low C/N municipal wastewater: Nutrients removal and microbial metabolic characteristics

This study aimed to present a strategy that utilizing semi-continuous flow primary sludge fermentation liquor as carbon source for anaerobic- multistage anaerobic/oxic (A-MAO) process to treat low chemical oxygen demand (COD) and total nitrogen (TN) (C/N) ratio municipal wastewater. The results showed that adding fermentation liquor resulted in average TN and total phosphorus (TP) concentration in effluent decreased from 33 and 2.80 mg L^-1 to 9.2 and 0.23 mg L^-1, respectively, which met wastewater discharge standard. High-throughput sequencing results indicated that bacterial richness increased and diversity decreased with fermentation liquor adding, and the dominant genera varied from Methylophilaceae and Methylotenera to unclassified_f_Rhodocyclaceae, noran k_f__env.OPS_17, and Azospira. Meanwhile, the abundance of metabolism and organismal systems in A-MAO process rose from 48.42% and 0.74% to 49.52% and 0.78%. The improvement of nitrogen and phosphorus removal with fermentation adding was based on the increment of enzyme coding genes in nitrogen and phosphorus pathway.

Mitigation of recalcitrant nutrients and organic pollutants from small- to medium-scale biological nutrient removal plant sludge by digester optimization

Digestion of biological nutrient removal (BNR) plant sludge can be challenging, particularly for small- to medium-sized wastewater treatment facilities (WWTF) which often lack the economies of scale, and/or expertise to make digestion feasible. This study compared various types of sludge digestion, sludge retention times (SRTs), and temperatures on the release of recalcitrant nutrients, digestion economics, and digester performance utilizing mixed primary and secondary sludge from a small- to medium-sized BNR facility. Mesophilic anaerobic digestion (AD), cycling aerobic/anoxic (AERO/ANOX) digestion, and sequential anaerobic/aerobic/anoxic (AD/AERO/ANOX) digestion at room and mesophilic temperatures were compared at SRTs between 5 and 20 days. AERO/ANOX digestion was very effective in treating recalcitrant forms of nitrogen and phosphorous by removing up to 87% of dissolved organic nitrogen (DON), up to 88 ± 2% of non-reactive dissolved phosphorous (NRDP). AERO/ANOX digestion also offered the lowest increase in sludge management costs versus the existing no-digestion baseline scenario. ADs removed up to 53 ± 1% of volatile solids (VS), whereas unheated AERO/ANOX digesters were less effective, removing up to 39 ± 1% of VS. Sequential AD/AERO/ANOX digesters with a mesophilic second-stage removed up to 61 ± 3% of VS but had the highest operational and capital costs. Experiments also indicated that significant amounts of orthophosphate (PO₄^3-) may be released from digested AERO/ANOX sludge during on-site storage, with longer SRTs releasing PO₄^3- more rapidly than shorter ones. These results are important as more WWTFs deploy BNR to meet increasingly stringent nutrient limits.

A novel metabolic-ASM model for full-scale biological nutrient removal systems

This study demonstrates that META-ASM, a new integrated metabolic activated sludge model, provides an overall platform to describe the activity of the key organisms and processes relevant to biological nutrient removal (BNR) systems with a robust single-set of default parameters. This model overcomes various shortcomings of existing enhanced biological phosphorous removal (EBPR) models studied over the last twenty years. The model has been tested against 34 data sets from enriched lab polyphosphate accumulating organism (PAO)-glycogen accumulating organism (GAO) cultures and experiments with full-scale sludge from five water resource recovery facilities (WRRFs) with two different process configurations: three stage Phoredox (A2/O) and adapted Biodenitro™ combined with a return sludge sidestream hydrolysis tank (RSS). Special attention is given to the operational conditions affecting the competition between PAOs and GAOs, capability of PAOs and GAOs to denitrify, metabolic shifts as a function of storage polymer concentrations, as well as the role of these polymers in endogenous processes and fermentation. The overall good correlations obtained between the predicted versus measured EBPR profiles from different data sets support that this new model, which is based on in-depth understanding of EBPR, reduces calibration efforts. On the other hand, the performance comparison between META-ASM and literature models demonstrates that existing literature models require extensive parameter changes and have limited predictive power, especially in the prediction of long-term EBPR performance. The development of such a model able to describe in detail the microbial and chemical transformations of BNR systems with minimal adjustment to parameters suggests that the META-ASM model is a powerful tool to predict and mitigate EBPR upsets, optimise EBPR performance and to evaluate new process designs.

Using cerium chloride to control soluble orthophosphate concentration and improve the dewaterability of sludge: Part II. A case study

High concentration of orthophosphate ion (OP) in anaerobically digested sludge can lead to struvite crystallization, deterioration of sludge dewaterability, and elevated mainstream OP loading through centrate recirculation. The Upper Occoquan Service Authority (UOSA) has observed seasonally high OP levels in its dewatering blend tank, which was found in this study to be a consequence of unwanted biological phosphorus accumulation during the intensified winter denitrification operation and the subsequent OP release in the course of anaerobic digestion. In order to control the nuisance struvite scaling issues, a bench study was conducted and cerium chloride (CeCl₃ ) was dosed as an effective OP precipitant. The results of this study demonstrated that CeCl₃ dosing showed higher OP removal efficiency than other commonly used OP precipitants. In addition, bench-scale simulations indicated sludge dewaterability improvements which were used to predict lower polymer and dewatering energy demands at the full scale. The economic analysis conducted in this case study showed that the seasonal dosing of CeCl₃ at UOSA has the potential to provide a net annual saving of US $47,000. PRACTITIONER POINTS: Biological phosphorus accumulation during the intensified denitrification operation caused seasonally high sludge OP and struvite scaling issues at UOSA. CeCl₃ was evaluated as an effective OP precipitant for struvite control and dewaterability improvement when aluminum and iron were determined to be unfavorable. Seasonal dosing of CeCl₃ at UOSA projected a net annual saving of US $47,000.

Promoting biological phosphorus removal in a full scale pre-denitrification wastewater treatment plant

A survey conducted in Italy revealed that less than 0.5% out of a sample of over 2,000 municipal wastewater treatment plants is equipped with an enhanced biological phosphorus removal process. Conditions promoting biological phosphorus removal have been investigated by monitoring three real plants equipped with, respectively: (A) simultaneous chemical precipitation; (B) enhanced biological removal powered by chemical precipitation; (C) tertiary chemical precipitation with evidence of phosphate accumulating bacteria. An anaerobic compartment revealed essential for the growth of these microorganisms, the readily degradable organic concentration in the influent playing a minor role. Mapping dissolved oxygen and oxidation-reduction potential in different compartments of plant (C) was carried out to understand the reasons why phosphate accumulating bacteria were found even in the absence of anaerobic reactor. Finally, the possibility to exploit the biological phosphorus removal in plant (C), by adjusting the aeration conditions, was explored and an economic analysis showed this to be a preferable approach with respect to the chemical removal of phosphorus.

Stimulation of optimized influent C:N ratios on nitrogen removal in surface flow constructed wetlands: Performance and microbial mechanisms

Exploring optimal C:N ratio is necessary to ensure balanced microbial nitrification and denitrification in constructed wetlands (CWs), which has become an important management practice for more efficient nitrogen removal and sustainability of CWs. Surface flow constructed wetlands (SFCWs) vegetated with Myriophyllum aquaticum were designed to investigate the effects of five different influent C:N ratios (0:1, 2.5:1, 5:1, 10:1, and 15:1) on nitrogen removal performance and microbial communities over a 175-day experimental period. Compared to the influent C:N ratios of 0:1, higher NH₄⁺-N, NO₃^--N, and total nitrogen (TN) removal efficiencies and lower NO₃^--N accumulation were observed at influent C:N ratios higher than 5:1. In addition, the highest TN removal efficiency (70.4%) and the lowest nitrous oxide emission flux (4.12 mg m^-2 d^-1) were obtained at the influent C:N ratio of 5:1. High-throughput sequencing revealed that influent C:N ratios altered the distribution and composition of microbial communities in the sediment, which resulted in a dynamic interplay between N-transforming functional microbes and NH₄⁺-N and NO₃^--N removal. In particular, the dominant denitrifiers, including Desulfovibrio, Zoogloea, and Dechloromonas, were more abundant in the sediment with an influent C:N ratio of 5:1, which contributed to the high N removal rate. These findings may be used to screen for an optimum influent C:N ratio to maintain the sustainability of SFCWs with higher N removal efficiency.

Simultaneous removal of nitrogen and phosphorous by heterotrophic nitrification-aerobic denitrification of a metal resistant bacterium Pseudomonas putida strain NP5

A novel strain NP5 with efficient heterotrophic nitrification, aerobic denitrification and phosphorus accumulation ability was isolated and identified as Pseudomonas putida strain NP5. The removed ammonium and phosphate were mainly converted into intracellular components by assimilation, and negligible nitrification intermediates and N₂O were accumulated during heterotrophic nitrification. In addition, the optimal conditions for nutrient removal were: succinate as carbon source, C/N 10, P/N 0.2, temperature 30 °C, salinity 0% and shaking speed 160 rpm. Besides, strain NP5 possessed an exceptional heavy metal and nanoparticles resistance. Cr⁶⁺ was found to be the most toxic among the tested metals, and it could be removed simultaneously. Moreover, an obvious phosphorus release was observed under anaerobic condition, and repeated exposure to the anaerobic/aerobic conditions could significantly improve the nutrient removal. Furthermore, the successful expression of key enzymes for nitrogen and phosphorous removal provided additional evidence for possibility of simultaneous nitrification, denitrification and phosphorus removal.

Re-evaluating the microbiology of the enhanced biological phosphorus removal process

We have critically assessed some of the dogmas in the microbiology of enhanced biological phosphorus removal (EBPR) and argue that the genus Tetrasphaera can be as important as Ca. Accumulibacter for phosphorus removal; and that proliferation of their competitors, the glycogen accumulating organisms, does not appear to be a practical problem for EBPR efficiency even under tropical conditions. An increasing number of EBPR-related genomes are changing our understanding of their physiology, for example, their potential to participate in denitrification. Rather than trying to identify organisms that adhere to strict phenotype metabolic models, we advocate for broader analyses of the whole microbial communities in EBPR plants by iterative studies with isolates, lab enrichments, and full-scale systems.

Polyphosphate-accumulating organisms in full-scale tropical wastewater treatment plants use diverse carbon sources

Enhanced biological phosphorus removal (EBPR) is considered challenging in the tropics, based on a great number of laboratory-based studies showing that the polyphosphate-accumulating organism (PAO) Candidatus Accumulibacter does not compete well with glycogen accumulating organisms (GAOs) at temperatures above 25 °C. Yet limited information is available on the PAO community and the metabolic capabilities in full-scale EBPR systems operating at high temperature. We studied the composition of the key functional PAO communities in three full-scale wastewater treatment plants (WWTPs) with high in-situ EBPR activity in Singapore, their EBPR-associated carbon usage characteristics, and the relationship between carbon usage and community composition. Each plant had a signature community composed of diverse putative PAOs with multiple operational taxonomic units (OTUs) affiliated to Ca. Accumulibacter, Tetrasphaera spp., Dechloromonas and Ca. Obscuribacter. Despite the differences in community composition, ex-situ anaerobic phosphorus (P)-release tests with 24 organic compounds from five categories (including four sugars, three alcohols, three volatile fatty acids (VFAs), eight amino acids and six other carboxylic acids) showed that a wide range of organic compounds could potentially contribute to EBPR. VFAs induced the highest P release (12.0-18.2 mg P/g MLSS for acetate with a P release-to-carbon uptake (P:C) ratio of 0.35-0.66 mol P/mol C, 9.4-18.5 mg P/g MLSS for propionate with a P:C ratio of 0.38-0.60, and 9.5-17.3 mg P/g MLSS for n-butyrate), followed by some carboxylic acids (10.1-18.1 mg P/g MLSS for pyruvate, 4.5-11.7 mg P/g MLSS for lactate and 3.7-12.4 mg P/g MLSS for fumarate) and amino acids (3.66-7.33 mg P/g MLSS for glutamate with a P:C ratio of 0.16-0.43 mol P/mol C, and 4.01-7.37 mg P/g MLSS for aspartate with a P:C ratio of 0.17-0.48 mol P/mol C). P-release profiles (induced by different carbon sources) correlated closely with PAO community composition. High micro-diversity was observed within the Ca. Accumulibacter lineage, which represented the most abundant PAOs. The total population of Ca. Accumulibacter taxa was highly correlated with P-release induced by VFAs, highlighting the latter's importance in tropical EBPR systems. There was a strong link between the relative abundance of individual Ca. Accumulibacter OTUs and the extent of P release induced by distinct carbon sources (e.g., OTU 81 and amino acids, and OTU 246 and ethanol), suggesting niche differentiation among Ca. Accumulibacter taxa. A diverse PAO community and the ability to use numerous organic compounds are considered key factors for stable EBPR in full-scale plants at elevated temperatures.

Integrated Omic Analyses Provide Evidence that a "Candidatus Accumulibacter phosphatis" Strain Performs Denitrification under Microaerobic Conditions

The ability of "Candidatus Accumulibacter phosphatis" to grow and remove phosphorus from wastewater under cycling anaerobic and aerobic conditions has also been investigated as a metabolism that could lead to simultaneous removal of nitrogen and phosphorus by a single organism. However, although phosphorus removal under cyclic anaerobic and anoxic conditions has been demonstrated, clarifying the role of "Ca. Accumulibacter phosphatis" in this process has been challenging, since (i) experimental research describes contradictory findings, (ii) none of the published "Ca. Accumulibacter phosphatis" genomes show the existence of a complete respiratory pathway for denitrification, and (iii) some genomes lacking a complete respiratory pathway have genes for assimilatory nitrate reduction. In this study, we used an integrated omics analysis to elucidate the physiology of a "Ca. Accumulibacter phosphatis" strain enriched in a reactor operated under cyclic anaerobic and microaerobic conditions. The reactor's performance suggested the ability of the enriched "Ca. Accumulibacter phosphatis" strain (clade IC) to simultaneously use oxygen and nitrate as electron acceptors under microaerobic conditions. A draft genome of this organism was assembled from metagenomic reads ("Ca. Accumulibacter phosphatis" UW-LDO-IC) and used as a reference to examine transcript abundance throughout one reactor cycle. The genome of UW-LDO-IC revealed the presence of a full pathway for respiratory denitrification. The observed transcript abundance patterns showed evidence of coregulation of the denitrifying genes along with a cbb ₃ cytochrome, which has been characterized as having high affinity for oxygen. Furthermore, we identified an FNR-like binding motif upstream of the coregulated genes, suggesting transcription-level regulation of both denitrifying and respiratory pathways in UW-LDO-IC. Taking the results together, the omics analysis provides strong evidence that "Ca. Accumulibacter phosphatis" UW-LDO-IC uses oxygen and nitrate simultaneously as electron acceptors under microaerobic conditions. IMPORTANCE "Candidatus Accumulibacter phosphatis" is widely found in full-scale wastewater treatment plants, where it has been identified as the key organism for biological removal of phosphorus. Since aeration can account for 50% of the energy use during wastewater treatment, microaerobic conditions for wastewater treatment have emerged as a cost-effective alternative to conventional biological nutrient removal processes. Our report provides strong genomics-based evidence not only that "Ca. Accumulibacter phosphatis" is the main organism contributing to phosphorus removal under microaerobic conditions but also that this organism simultaneously respires nitrate and oxygen in this environment, consequently removing nitrogen and phosphorus from the wastewater. Such activity could be harnessed in innovative designs for cost-effective and energy-efficient optimization of wastewater treatment systems.

Effects of hydraulic retention time on the performance of algal-bacterial-based aquaponics (AA): focusing on nitrogen and oxygen distribution

The effects of hydraulic retention time (HRT) on the performance of algal-bacterial-based aquaponics (AA) were investigated in this study. Both the highest fish growth and algal biomass increase were observed in the AA system at 2-day HRT, resulting in the highest nitrogen utilization efficiency (NUE) (39.28%) in this microcosm. On the contrary, ammonia oxidation bacteria (AOB) abundance at 4-day HRT was approximately ten times higher than that at 2-day HRT, since longer HRT would benefit bacterial growth. The ¹⁵N labeling study showed that microalgae assimilation was the main pathway of NH₄⁺ removal in the AA system, and oxygen produced by microalgae could in situ support complete nitrification, thus leading to much lower NH₄⁺ concentrations at 2-day HRT. Accordingly, better water quality was achieved at 2-day HRT. Considering all the factors, HRT of 2-day was considered to be optimal for the AA system.

Correlating microbial community structure with operational conditions in biological aerated filter reactor for efficient nitrogen removal of municipal wastewater

In this study, the combination of strengthen circulation anaerobic (SCA) and biological aerated filter (BAF) reactor was employed to treat municipal wastewater. Different reflux percentages or gas/water ratios were selected for evaluating the removal performance of contaminants in SCA-BAF system and sequential nitrification and denitrification process in BAF reactor. In general, reflux percentage (200%) and gas/water ratio (3:1) were a relatively suitable operational condition for BAF reactor. The COD, NH₃-N, TN concentrations of effluents collected from BAF reactor varied in the ranges of 18-80, 0.2-7.2, 9.1-33.0 mg L^-1, respectively. A higher NO₃-N concentration in effluents of BAF reactor resulted from the lack of organic carbon resource in wastewater. High throughput sequencing analysis indicated that different nitrification and denitrification bacteria thrived in the BAF reactor. The DO, NO₂-N and NO₃-N concentrations showed a strong correlation with Nitrospira and Nitrosomonas in bacterial samples outlet (c and e) under gas/water ratio of 3:1.

The influence of complex fermentation broth on denitrification of saline sewage in constructed wetlands by heterotrophic nitrifying/aerobic denitrifying bacterial communities

An experimental vertical-flow constructed wetland (CW) was tested to treat salt-containing sewage. CW clogging deposits and withered Pontederia cordata L. were collected into a complex fermentation broth to serve as the carbon source and its effects on the denitrification capacity and microbial composition of the CW were examined. Addition of the complex fermentation broth into the CW influent (1.8% salinity) led to high removal efficiencies of NH₄⁺-N > 99.82 ± 0.00% and TN > 90.39 ± 0.05%. Heterotrophic nitrifiers and aerobic denitrifiers were entirely dominant in the middle and upper layers of the CW, where obligate halophilic, aerobic denitrifiers Zobellella occurred. The CW successfully cultivated and enriched heterotrophic nitrifying-aerobic denitrifying bacteria, overcoming the effects of salinity and insufficient organic carbon sources on the denitrification capacity of CW. This type of complex carbon sources can also facilitate the utilization of waste resources, such as CW clogging deposits and withered wetland plants.