Production of biogenic manganese oxides coupled with methane oxidation in a bioreactor for removing metals from wastewater

Enhanced oxidation of Mn(II) and As(III) by aerobic granular sludge via ferrous citrate: Key roles of colloidal iron and extracellular superoxide radical

Microbial manganese (Mn) oxidation plays a crucial role in shaping the fate of various elements, including arsenic (As). However, this process faces challenges in wastewater environments due to its inherent inefficiency and instability. In our initial research, a serendipitous discovery occurred: the addition of citrate to Fe(II)-containing wastewater stimulated the oxidation of Mn(II) by aerobic granular sludge (AGS). Subsequent experiments in four sequencing batch reactors (SBRs) over a 67-day period confirmed this stimulatory effect. The presence of Fe(II)-citrate led to a remarkable twofold increase in the oxidation of Mn(II) and As(III). The removal efficiency improved from 21±4 % to 87±7 % for Mn(II) and from 77.1 ± 1.8 % to 93.6 ± 0.2 % for As(III). The verification experiments demonstrated that the simultaneous addition of manganese-oxidizing bacteria (MnOB) and Fe(II)-citrate is an effective strategy for enhancing the oxidation and removal of Mn(II) and As(III) by AGS. Through a combination of genomic analysis, cell-free filtrate incubation, and bacterial batch cultivations (including monitoring the time-course changes of 17 substances and 2 free radicals), we elucidated a novel Mn(II) oxidation pathway in Pseudomonas, along with its stimulation method and mechanism. First, bacteria rapidly degrade citrate possibly via the citrate-Mg2+:H+ symporter (CitMHS) and the tricarboxylic acid (TCA) cycle, resulting in the formation of colloidal Fe(II), colloidal Fe(III), and biogenic iron (hydr)oxides (FeOx). Then, colloidal Fe(II) and colloidal Fe(III) stimulated extracellular proteins to produce superoxide radicals (·O2-). These radicals were responsible for oxidizing Mn(II) into Mn(III), ultimately forming biogenic manganese oxides (MnOx). Finally, MnOx effectively oxidized As(III) to the less toxic As(V). This innovative approach for bacterial Mn(II) oxidation holds promise for treating Mn(II) and As(III) in water and wastewater. Furthermore, the mechanism by which colloidal iron stimulates extracellular proteins to produce ·O2-, thereby facilitating Mn(II) oxidation, may widely occur across various engineering and natural ecosystems.

Methane oxidation coupling with heavy metal and microplastic transformations for biochar-mediated landfill cover soil

The impact of co-occurring heavy metal (HM) and microplastic (MP) pollution on methane (CH4) oxidation by methanotrophs (MOB) in landfill cover soil (LCS) and the role of biochar in mediating these collaborative transformations remains unclear. This study conducted batch-scale experiments using LCS treated with individual or combined HMs and MPs, with or without biochar amendment. Differentiation in methanotrophic activities, HM transformations, MP aging, soil properties, microbial communities, and functional genes across the groups were analyzed. Biochar proved essential in sustaining efficient CH4 oxidation under HM and MP stress, mainly by diversifying MOB, and enhancing polysaccharide secretion to mitigate environmental stress. While low levels of HMs slightly inhibited CH4 oxidation, high HM concentration enhanced methanotrophic activities by promoting electron transfer process. MPs consistently stimulated CH4 oxidation, exerting a stronger influence than HMs. Notably, the simultaneous presence of low levels of HMs and MPs synergistically boosted CH4 oxidation, linked to distinct microbial evolution and adaptation. Methanotrophic activities were demonstrated to affect the fate of HMs and MPs. Complete passivation of Cu was readily achieved, whereas Zn stabilization was negatively influenced by biochar and MPs. The aging of MPs was also partially suppressed by biochar and HM adsorption.

Water-fertilizer regulation drives microorganisms to promote iron, nitrogen and manganese cycling: A solution for arsenic and cadmium pollution in paddy soils

The co-contamination of arsenic (As) and cadmium (Cd) in rice fields presents a global imperative for resolution. However, understanding the complex microbially driven geochemical processes and network connectivity crucial for As and Cd bioavailability under the frequent redox transitions in rice fields remains limited. Here, we conducted a series of microcosm experiments, using flooding and drainage, alongside fertilization treatments to emulate different redox environment in paddy soils. Soil As significantly reduced in drained conditions following applications of biochar or calcium-magnesium-phosphate (CMP) fertilizers by 26.3 % and 31.2 %, respectively, with concurrent decreases in Cd levels. Utilizing geochemical models, we identified the primary redox cycles dynamically altering during flooding (Fe and S cycles) and drainage (Fe, Mn, and N cycles). PLS-SEM elucidated 76 % and 61 % of the variation in Cd and As through Mn and N cycles. Functional genes implicated in multi-element cycles were analyzed, revealing a significantly higher abundance of assimilatory N reduction genes (nasA, nirA/B, narB) in drained soil, whereas an increase in ammonia-oxidizing genes (amoA/B) and a decrease in nitrate reduction to ammonium genes were observed after CMP fertilizer application. Biochar application led to significant enrichment of the substrate-binding protein of the Mn transport gene (mntC). Moreover, Fe transport genes were enriched after biochar or CMP application compared to drained soils. Among 40 high-quality metagenome-assembled genomes (MAGs), microbial predictors associated with low Cd and As contents across different treatments were examined. Bradyrhizobacea harbored abundant Mn and FeIII transport genes, while Nitrososphaeraceae carried nitrification-related genes. Two MAGs affiliated with Caulobacteraceae, carrying diverse Fe transport genes, were enriched in biochar-applied soils. Therefore, applying CMP fertilizer or biochar in aerobic rice fields can synergistically reduce the bioavailability of Cd and As by specifically enhancing the circulation of essential elements.

Characteristic and mechanism of biological nitrogen and phosphorus removal facilitated by biogenic manganese oxides (BioMnOx) at various concentrations of Mn(II)

Biogenic manganese oxides (BioMnOx) have attracted considerable attention as active oxidants, adsorbents, and catalysts. However, characteristics and mechanisms of nitrification-denitrification in biological redox reactions mediated by different concentrations of BioMnOx are still unclear. Fate of nutrients (e.g., NH4+-N, TP, NO3--N) and COD were investigated through different concentrations of BioMnOx produced by Mn(II) in the moving bed biofilm reactor (MBBR). 34% and 89.2%, 37.8% and 89.8%, 57.3% and 88.9%, and 62.1% and 90.4% of TN and COD by MBBR were synchronously removed in four phases, respectively. The result suggested that Mn(II) significantly improved the performance of simultaneous nitrification and denitrification (SND) and TP removal based on manganese (Mn) redox cycling. Characteristics of glutathione peroxidase (GSH-Px), reactive oxygen species (ROS), and electron transfer system activity (ETSA) were discussed, demonstrating that ROS accumulation reduced the ETSA and GSH-Px activities when Mn(II) concentration increased. Extracellular polymeric substance (EPS) function and metabolic pathway of Mn(II) were explored. Furthermore, effect of cellular components on denitrification was evaluated including BioMnOx performances, indicating that Mn(II) promoted the non-enzymatic action of cell fragments. Finally, mechanism of nitrification and denitrification, denitrifying phosphorus and Mn removal was further elucidated through X-ray photoelectron spectroscopy (XPS), high throughput sequencing, and fourier transform infrared reflection (FTIR). This results can bringing new vision for controlling nutrient pollution in redox process of Mn(II).

Biogenic manganese oxides promote metal(loid) remediation by shaping microbial communities in biological aqua crust

Biological aqua crust (biogenic aqua crust-BAC) is a potentially sustainable solution for metal(loid) bioremediation in global water using solar energy. However, the key geochemical factors and underlying mechanisms shaping microbial communities in BAC remain poorly understood. The current study aimed at determining the in situ metal(loid) distribution and the key geochemical factors related to microbial community structure and metal(loid)-related genes in BAC of a representative Pb/Zn tailing pond. Here we showed that abundant metal(loid)s (e.g. Pb, As) were co-distributed with Mn/Fe-rich minerals (e.g. biogenic Mn oxide, FeOOH) in BAC. Biogenic Mn oxide (i.e. Mn) was the most dominant factor in shaping microbial community structure in BAC and source tailings. Along with the fact that keystone species (e.g. Burkholderiales, Haliscomenobacter) have the potential to promote Mn ion oxidization and particle agglomeration, as well as Mn is highly associated with metal(loid)-related genes, especially genes related to As redox (e.g. arsC, aoxA), and Cd transport (e.g. zipB), biogenic Mn oxides thus effectively enhance metal(loid) remediation by accelerating the formation of organo-mineral aggregates in biofilm-rich BAC system. Our study indicated that biogenic Mn oxides may play essential roles in facilitating in situ metal(loid) bioremediation in BAC of mine drainage.

Efficient Mn(II) removal by biological granular activated carbon filtration

Sufficient and sustainable manganese(II) removal is a challenging task to prevent Mn-related drinking water discoloration problems. This study investigated Mn(II) removal by granular activated carbon (GAC) filtration under various conditions. The results showed that biological GAC filter columns could reduce Mn(II) from 400 μg/L to 10 μg/L after a short ripening period, while sand filter columns did not show evident Mn(II) removal function. Water quality changes, pretreatment with NaClO and chemogenic MnO_x coating on GAC media surface did not influence the Mn(II) removal capacity of GAC filter columns. 16S rRNA gene sequencing showed that the abundance of potential Mn(II)-oxidizing bacteria in the GAC media was similar to that in the sand media. However, qPCR results indicated that GAC media colonized dramatically more biomass than sand media, resulting in highly effective Mn(II) removal by GAC filter columns. Under chlorinated conditions, GAC filtration underperformed sand filtration in Mn(II) removal, although activated carbon has been reported to be capable of catalyzing Mn(II) oxidation by chlorine. Fast chlorine decay in GAC filter columns made it hard to sustain chemical Mn(II) oxidation and thus led to less Mn(II) removal. This study highlighted the advantage of biological GAC filtration over sand filtration in Mn(II) removal.

BPA degradation using biogenic manganese oxides produced by an engineered Escherichia coli with a non-blue laccase from Bacillus sp. GZB

Bisphenol A (BPA), an endocrine disruptor that is often found in a variety of environmental matrixes, poses a serious health risk. One of the most effective methods for completely degrading BPA is biological oxidation. This study used a non-blue laccase to develop an engineer Escherichia coli strain for the synthesis of biogenic manganese oxides (BMO). The recombinant strain LACREC3 was utilized for the efficient production of BMO. The LACREC3 strain developed the erratic clumps of BMO after prolonged growth with Mn²⁺, as shown by scanning electron microscopy (SEM) and energy-dispersive X-ray (EDS) tests. After 12 days of incubation under liquid culture conditions, a total of 51.97 ± 0.56% Mn-oxides were detected. The Brunauer-Emmett-Teller (BET) surface areas, X-ray diffraction (XRD), Fourier transform infrared (FT-IR), and X-ray photoelectron spectroscopy (XPS) experiments were further used to characterize the purified BMO. Data revealed that Mn(IV)-oxides predominated in the structure of BMO, which was amorphous and weakly crystalline. The BPA oxidation assay confirmed the high oxidation efficiency of BMO particle. BMO degraded 96.16 ± 0.31% of BPA in total over the course of 60 min. The gas chromatography and mass spectroscopy (GC-MS) identified BPA-intermediates showed that BPA might break down into less hazardous substances that were tested by Photobacterium Phosphoreum in an acute toxicity experiment. Thus, employing BMO generated by a non-blue laccase, this study introduces a new biological technique of metal-oxidation and organic-pollutant degradation.

Cultivation of previously uncultured microorganisms with a continuous-flow down-flow hanging sponge (DHS) bioreactor, using a syntrophic archaeon culture obtained from deep marine sediment as a case study

In microbiology, cultivation is a central approach for uncovering novel physiology, ecology, and evolution of microorganisms, but conventional methods have left many microorganisms found in nature uncultured. To overcome the limitations of traditional methods and culture indigenous microorganisms, we applied a two-stage approach: enrichment/activation of indigenous organisms by using a continuous-flow down-flow hanging sponge bioreactor and subsequent selective batch cultivation. Here, we provide a protocol for this bioreactor-mediated technique using activation of deep marine sediment microorganisms and downstream isolation of a syntrophic co-culture containing an archaeon closely related to the eukaryote ancestor (Candidatus Promethearchaeum syntrophicum strain MK-D1) as an example. Both stages can easily be tailored to target other environments and organisms by modifying the inoculum, feed solution/gases, attachment material and/or cultivation media. We anaerobically incubate polyurethane sponges inoculated with deep-sea methane seep sediment in a reactor at 10 °C and feed anaerobic artificial seawater medium and methane. Once phylogenetically diverse and metabolically active microorganisms are adapted to synthetic conditions in the reactor, we transition to growing community samples in glass tubes with the above medium, simple substrates and selective compounds (e.g., antibiotics). To accommodate for the slow growth anticipated for target organisms, primary cultures can be incubated for ≥6-12 months and analyzed for community composition even when no cell turbidity is observed. One casamino acid- and antibiotic-amended culture prepared in this way led to the enrichment of uncultured archaea. Through successive transfer in vitro combined with molecular growth monitoring, we successfully obtained the target archaeon with its partner methanogen as a pure syntrophic co-culture.

Manganese oxidation and prokaryotic community analysis in a polycaprolactone-packed aerated biofilm reactor operated under seawater conditions

Biogenic manganese oxides (BioMnOx) have been receiving increasing attention for the removal of environmental contaminants and recovery of minor metals from water environments. However, the enrichment of heterotrophic Mn(II)-oxidizing microorganisms for BioMnOx production in the presence of fast-growing coexisting heterotrophs is challenging. In our previous work, we revealed that polycaprolactone (PCL), a biodegradable aliphatic polyester, can serve as an effective solid organic substrate to enrich Mn-oxidizing microbial communities under seawater conditions. However, marine BioMnOx-producing bioreactor systems utilizing PCL have not yet been established. Therefore, a laboratory-scale continuous-flow PCL-packed aerated biofilm (PAB) reactor was operated for 238 days to evaluate its feasibility for BioMnOx production under seawater conditions. After the start-up of the reactor, the average dissolved Mn removal rates of 0.4-2.3 mg/L/day, likely caused by Mn(II) oxidation, were confirmed under different influent dissolved Mn concentrations (2.5-14.0 mg/L on average) and theoretical hydraulic retention time (0.19-0.77 day) conditions. The 16S rRNA gene amplicon sequencing analysis suggested the presence of putative Mn(II)-oxidizing and PCL-degrading bacterial lineages in the reactor. Two highly dominant operational units (OTUs) in the packed PCL-associated biofilm were assigned to the genera Marinobacter and Pseudohoeflea, whereas the genus Lewinella and unclassified Alphaproteobacteria OTUs were highly dominant in the MnOx-containing black/dark brown precipitate-associated biofilm formed in the reactor. Excitation-emission matrix fluorescence spectroscopy analysis revealed the production of tyrosine- and tryptophane-like components, which may serve as soluble heterotrophic organic substrates in the reactor. Our findings indicate that PAB reactors are potentially applicable to BioMnOx production under seawater conditions.

Environmental Factors Affecting the Community of Methane-oxidizing Bacteria

Methane-oxidizing bacteria (MOB) are ubiquitous and play an important role in the mitigation of global warming by reducing methane. MOB are commonly classified into Type I and Type II, belonging to Gammaproteobacteria and Alphaproteobacteria, respectively, and the diversity of MOB has been examined. However, limited information is currently available on favorable environments for the respective MOB. To investigate the environmental factors affecting the dominant type in the MOB community, we performed MOB enrichment using down-flow hanging sponge reactors under 38 different environmental conditions with a wide range of methane (0.01–80%) and ammonium concentrations (0.001–2,000‍ ‍mg N L^–1) and pH 4–7. Enrichment results revealed that pH was a crucial factor influencing the MOB type enriched. Type II was dominantly enriched at low pH (4–5), whereas Type I was dominant around neutral pH (6–7). However, there were some unusual cultivated biomass samples. Even though high methane oxidation activity was observed, very few or zero conventional MOB were detected using common FISH probes and primer sets for the 16S rRNA gene and pmoA gene amplification. Mycobacterium mostly dominated the microbial community in the biomass cultivated at very high NH₄⁺ concentrations, strongly implying that it exhibits methane oxidation activity. Collectively, the present results revealed the presence of many unknown phylogenetic groups with the capacity for methane oxidation other than the reported MOB.

Experimental study on treatment of heavy metal-contaminated soil by manganese-oxidizing bacteria

There are many studies on the treatment of heavy metals by manganese-oxidizing bacteria and the reaction is good; the problem of compound pollution of heavy metals in soil has been difficult to solve. In this study, the application of manganese-oxidizing bacteria in soil was studied. The tolerance of manganese-oxidizing strains (Pseudomonas taiwanensis) to environmental conditions and the treatment effect of heavy metals As, Pb, and Cd in aqueous solution were investigated, and the effect of iron-manganese ratio on the treatment effect was discussed. The results showed that the suitable pH conditions for the growth of P. taiwanensis were 5-9, and the salt tolerance was 6% (by sodium chloride). The tolerant concentrations for heavy metals As(V) and Mn(II) were 500 mg L^-1 and 120 mg L^-1, respectively. The strains were enriched by nutrient broth medium. After the logarithmic phase, the bacterial suspension was mixed with ATCC#279 medium at a ratio of 1:10, and a certain amount (10 mg L^-1) of Mn(II) was added. The results of As, Pb, and Cd removal in the composite polluted water phase were 22.09%, 30.75%, and 35.33%, respectively. The molar ratio of manganese and iron affected the removal efficiency of single arsenic, the highest efficiency is 68%, and the ratio of iron to manganese is 1:5. However, when the soil was treated by the same method, the results showed that not all metals were passivated, such as Cu. At the same time, for As, Pb, and Cd, the treatment effects in soil were worse than those in water, perhaps more consideration should be given to environmental conditions, such as soil moisture and temperature, when manganese-oxidizing bacteria are used to treat soil.

Biogenic metal nanoparticles with microbes and their applications in water treatment: a review

Due to their unique characteristics, nanomaterials are widely used in many applications including water treatment. They are usually synthesized via physiochemical methods mostly involving toxic chemicals and extreme conditions. Recently, the biogenic metal nanoparticles (Bio-Me-NPs) with microbes have triggered extensive exploration. Besides their environmental-friendly raw materials and ambient biosynthesis conditions, Bio-Me-NPs also exhibit the unique surface properties and crystalline structures, which could eliminate various contaminants from water. Recent findings in the synthesis, morphology, composition, and structure of Bio-Me-NPs have been reviewed here, with an emphasis on the metal elements of Fe, Mn, Pd, Au, and Ag and their composites which are synthesized by bacteria, fungi, and algae. Furthermore, the mechanisms of eliminating organic and inorganic contaminants with Bio-Me-NPs are elucidated in detail, including adsorption, oxidation, reduction, and catalysis. The scale-up applicability of Bio-Me-NPs is also discussed.

Metallo-inhibition of Mnx, a bacterial manganese multicopper oxidase complex

The manganese oxidase complex, Mnx, from Bacillus sp. PL-12 contains a multicopper oxidase (MCO) and oxidizes dissolved Mn(II) to form insoluble manganese oxide (MnO₂) mineral. Previous kinetic and spectroscopic analyses have shown that the enzyme's mechanism proceeds through an activation step that facilitates formation of a series of binuclear Mn complexes in the oxidation states II, III, and IV on the path to MnO₂ formation. We now demonstrate that the enzyme is inhibited by first-row transition metals in the order of the Irving-Williams series. Zn(II) strongly (K_i ~ 1.5 μM) inhibits both activation and turnover steps, as well as the rate of Mn(II) binding. The combined Zn(II) and Mn(II) concentration dependence establishes that the inhibition is non-competitive. This result is supported by electron paramagnetic resonance (EPR) spectroscopy, which reveals unaltered Mnx-bound Mn(II) EPR signals, both mono- and binuclear, in the presence of Zn(II). We infer that inhibitory metals bind at a site separate from the substrate sites and block the conformation change required to activate the enzyme, a case of allosteric inhibition. The likely biological role of this inhibitory site is discussed in the context of Bacillus spore physiology. While Cu(II) inhibits Mnx strongly, in accord with the Irving-Williams series, it increases Mnx activation at low concentrations, suggesting that weakly bound Cu, in addition to the four canonical MCO-Cu, may support enzyme activity, perhaps as an electron transfer agent.

Enzymatically synthesised MnO2 nanoparticles for efficient near-infrared photothermal therapy and dual-responsive magnetic resonance imaging

Manganese dioxide (MnO2) nanoparticles (NPs) are highly attractive for biomedical applications due to their biocompatibility, stimuli-responsive magnetic resonance imaging (MRI) properties and capability to modulate the hypoxic tumour microenvironment (TME). However, conventional MnO2 NPs do not possess photothermal therapy (PTT) functions except for hybrids with other photothermal materials. Herein, we first reveal the extraordinary photothermal conversion efficiency (44%) of enzymatically synthesised MnO2 NPs (Bio-MnO2 NPs), which are distinct from chemically synthesised MnO2 NPs. In addition, the Bio-MnO2 NPs revealed high thermal recycling stability and solubility as well as dual pH- and reduction-responsive MRI enhancement for tumour theragnosis. These NPs were prepared through a facile MnxEFG enzyme-mediated biomineralization process. The MnxEFG complex from Bacillus sp. PL-12 is the only manganese mineralization enzyme that could be heterologously overexpressed in its active form to achieve Bio-MnO2 NPs without a bacterial host. The hexagonal layer symmetry of the Bio-MnO2 NPs is the key feature facilitating the high photothermal conversion efficiency and TME-responsive T1-weighted MRI. Evaluations both in vitro at the cellular level and in vivo in a systematic tumour-bearing mouse xenograft model demonstrated the high photothermal ablation efficacy of the Bio-MnO2 NPs, which achieved complete tumour eradication with high therapeutic biosafety without obvious reoccurrence. Moreover, stimuli-responsive MR enhancement potentially allows imaging-guided precision PTT. With their excellent biocompatibility, mild synthesis conditions and relatively simple composition, Bio-MnO2 NPs hold great translational promise.

Synthesis of MnO/C/Co3O4 nanocomposites by a Mn2+-oxidizing bacterium as a biotemplate for lithium-ion batteries

The biotemplate and bioconversion strategy represents a sustainable and environmentally friendly approach to material manufacturing. In the current study, biogenic manganese oxide aggregates of the Mn²⁺-oxidizing bacterium Pseudomonas sp. T34 were used as a precursor to synthesize a biocomposite that incorporated Co (CMC-Co) under mild shake-flask conditions based on the biomineralization process of biogenic Mn oxides and the characteristics of metal ion subsidies. X-ray photoelectron spectroscopy, phase composition and fine structure analyses demonstrated that hollow MnO/C/Co₃O₄ multiphase composites were fabricated after high-temperature annealing of the biocomposites at 800°C. The cycling and rate performance of the prepared anode materials for lithium-ion batteries were compared. Due to the unique hollow structure and multiphasic state, the reversible discharge capacity of CMC-Co remained at 650 mAh g^-1 after 50 cycles at a current density of 0.1 Ag^-1, and the coulombic efficiency remained above 99% after the second cycle, indicating a good application potential as an anode material for lithium-ion batteries.

Enrichment of marine manganese-oxidizing microorganisms using polycaprolactone as a solid organic substrate

OBJECTIVE

Heterotrophic manganese (Mn)-oxidizing microorganisms responsible for biogenic manganese oxide (Bio-MnOx) production are fastidious. Their enrichment is not easily accomplished by merely adding a soluble organic substrate to non-sterile mixed cultures. The objective of this study was to evaluate polycaprolactone (PCL), an aliphatic polyester, as an effective solid organic substrate for the enrichment of marine Mn-oxidizing microorganisms.

RESULTS

We successfully obtained marine microbial enrichment with the capacity for dissolved Mn removal and MnOx production using PCL as a solid organic substrate. The removal of dissolved Mn by the Mn-oxidizing enrichment culture followed first-order kinetics with a rate constant of 0.014 h^-1. 16S rRNA gene amplicon sequencing analysis revealed that the Mn-oxidizing enrichment culture was highly dominated by operational taxonomic units related to the bacterial phyla Cyanobacteria, Planctomycetes, and Proteobacteria.

CONCLUSIONS

Our data demonstrate that PCL can serve as a potential substrate to enrich Mn-oxidizing microorganisms with the ability to produce MnOx under marine conditions.

Self-regulating microbiome networks ensure functional resilience of biofilms in sand biofilters during manganese load fluctuations

Sand biofilters (SBFs) are commonly used to remove manganese (Mn(II)) from drinking water. Mn(II) load variation frequently occurs in SBFs due to fluctuating influent Mn(II) concentrations or flow rates. Therefore, it is important to understand the responses of microbial biofilms in SBFs to environmental disturbances and how they affect Mn(II) oxidation efficiency. Here, the responses of microbial ecological networks and Mn(II) removal in SBFs to increasing Mn(II) load were investigated. The Mn(II) removal efficiency in two SBFs remained at 99.8% despite an increase in influent Mn(II) from 2 mg/L to 4 mg/L, but significantly deteriorated (50.1-58.5%) upon increasing the filtration rate. A canonical correlation analysis of the microbial communities indicated that the local Mn(II) concentration and biofilter depth impacted community compositions of biofilms. The dominant species within the biofilms exhibited clear stratification, with simple associations in the upper layer of the SBFs and more complex interspecies interactions in the bottom layers. Putative manganese-oxidizing bacteria Hyphomicrobium and Pedomicrobium dominated the microbiomes in different layers of SBFs, and changed relatively little in abundance when Mn(II) and filtration rate increased. The community networks showed that biofilm microbiomes in SBFs were resilient to the disturbance of Mn(II) load, primarily via regulating microbial interactions. High manganese loads negatively affected the functional modules for Mn(II) removal. Furthermore, the relatively rare species Candidatus Entotheonella palauensis was identified as a module hub, implying taxa with low abundances can have important roles in ecosystem function. These results shed new light on the ecological rules guiding responses of microbiomes in sand biofilters to environmental stress.

Enhanced performance of tetracycline treatment in wastewater using aerobic granular sludge with in-situ generated biogenic manganese oxides

Wastewaters containing tetracycline (TC) are produced in many industries, and biotechnology is an economic way to treat it. In this work, aerobic granular sludge (AGS) modified with in-situ generated biogenic manganese oxides (BioMnOx), named after manganese-oxidizing AGS (Mn-AGS), was used to treat TC in wastewater. Comparisons between Mn-AGS and AGS indicated that Mn-AGS showed superior TC resistance and treatment results than AGS. The activity of Mn-AGS was not inhibited by TC content as high as 20 mg/L. Wastewater TC could be removed stably and efficiently (95.2 ± 0.8%) in the Mn-AGS reactors after 119 days' acclimation. Furthermore, TC may be first adsorbed on Mn-AGS sludge and then degraded by both microbial community and BioMnOx. TC adsorption could be greatly improved by increasing solution pH, which can be attributed to the increase in negatively charged TC species at high pHs. The microbial community changed greatly after TC exposure and some TC-resistant bacteria, such as Flavobacterium, were enriched in the final sludge. Moreover, the antibiotic resistance genes (ARGs) tetA, tetG, and tetX largely increased and the microorganisms were TC-resistant through efflux pumps and antibiotic inactivation mechanisms. This work suggests a new biological-chemical coupling strategy, Mn-AGS, to treat antibiotics in organic wastewater with high efficiency and stability.

Multiple organic substrates support Mn(II) removal with enrichment of Mn(II)-oxidizing bacteria

Three different organic substrates, K-medium, sterilized activated sludge (SAS), and methanol, were examined for utility as substrates for enriching manganese-oxidizing bacteria (MnOB) in an open bioreactor. The differences in Mn(II) oxidation performance between the substrates were investigated using three down-flow hanging sponge (DHS) reactors continuously treating artificial Mn(II)-containing water over 131 days. The results revealed that all three substrates were useful for enriching MnOB. Surprisingly, we observed only slight differences in Mn(II) removal between the substrates. The highest Mn(II) removal rate for the SAS-supplied reactor was 0.41 kg Mn⋅m^-3⋅d^-1, which was greater than that of K-medium, although the SAS performance was unstable. In contrast, the methanol-supplied reactor had more stable performance and the highest Mn(II) removal rate. We conclude that multiple genera of Comamonas, Pseudomonas, Mycobacterium, Nocardia and Hyphomicrobium play a role in Mn(II) oxidation and that their relative predominance was dependent on the substrate. Moreover, the initial inclusion of abiotic-MnO₂ in the reactors promoted early MnOB enrichment.

Single molecule sequencing reveals response of manganese-oxidizing microbiome to different biofilter media in drinking water systems

Rapid sand biofiltration (RSBF) is widely used for the removal of contaminants from drinking water treatment systems. Biofilm microbiomes in the biofilter media play essential roles in biotransformation of contaminants, but is not comprehensively understood. This study reports on Mn(II) oxidation and the core microbiomes in magnetite sand RSBF (MagS-RSBF) and manganese sand RSBF (MnS-RSBF). MnS-RSBF showed a relatively higher Mn(II) removal rate (40-91.2%) than MagS-RSBF during the start-up. MagS-RSBF and MnS-RSBF had similar Mn(II) removal rates (94.13% and 99.16%) over stable operation for 80 days. Mn(II) removal rates at different depths in the MnS-RSBF reactor significantly changed with operation time, and the filter in the upper layer of MnS-RSBF made the largest contribution to Mn(II) oxidation once operation had stabilized. PacBio single molecule sequencing of full-length 16S rRNA gene indicated that biofilter medium had a significant impact on the core microbiomes of the biofilms from the two biofilters. The magnetite sand biofilter facilitated the enrichment of Mn(II)-oxidizing biofilms. The dominant populations consisted of Pedomicrobium, Pseudomonas, and Hyphomicrobium in the RSBF, which have been affiliated with putative manganese-oxidizing bacteria (MnOB). The relative abundance of Pedomicrobium manganicum increased with operation time in both RSBF reactors. In addition, Nordella oligomobilis and Derxia gummosa were statistically correlated with Mn(II) oxidation. Species-species co-occurrence networks indicated that the microbiome of MnS-RSBF had more complex correlations than that of MagS-RSBF, implying that biofilter medium substantially shaped the microbial community in the RSBF. Hyphomicrobium and nitrite-oxidizing Nitrospira moscoviensis were positively correlated. The core microbiomes' composition of both RSBF reactors converged over operation time. A hybrid biofilter medium with magnetite sand and manganese sand may therefore be best in rapid sand filtration for Mn(II) oxidation.

Discovery of a novel native bacterium of Providencia sp. with high biosorption and oxidation ability of manganese for bioleaching of heavy metal contaminated soils

Heavy metal removal from contaminated soils is a long-term challenging problem important for global economics, environment, and human health. Marine and freshwater-originated Mn(II)-oxidizing bacteria are considered as the promising bioremediation agents for environmental applications. However, practical application of soil-originated Mn(II)-oxidizing bacteria remains to be developed for contaminated soil remediation. In this work, the Mn(II) biosorption/oxidation mechanism of a new soil-originated bacterium and its bioleaching efficiency of heavy metals from soils was studied in detail. First, we found, isolated and identified a new highly Mn(II)-tolerant bacterial strain Providencia sp. LLDRA6 from heavy metal-contaminated soils. Next, strain LLDRA6 demonstrated its high Mn(II) biosorption capacity in aqueous solution. Then, Mn(II) adsorption by LLDRA6 was largely proven to be a synergistic effect of (i) Mn(II) precipitation on the cell surface, (ii) oxidation of Mn(II) into BioMnO_x on the cell surface, and (iii) intracellular accumulation of insoluble MnCO₃. Finally, combination bioleaching by the bacterium of Providencia sp. LLDRA6 and its formed BioMnO_x was proposed to develop a potential environment-friendly and cost-effective technique to remediate severely heavy metal-contaminated soils. The bioleaching tests demonstrated that the combination of Providencia sp. LLDRA6 and BioMnO_x exhibited an excellent removal efficiency for heavy metals of Pb (81.72%), Cr (88.29%), Cd (90.34%), Cu (91.25%), Mn (56.13%), and Zn (59.83%) from contaminated soils, resulting in an increase of removal efficiency in the range of 1.68-26.4% compared to Providencia sp. LLDRA6 alone. Moreover, the bacterial leachate facilitated the residual fraction of metals to transform into the easily migratory fractions in soils. These findings have demonstrated that strain LLDRA6 has high adsorption ability to remove heavy metals from contaminated soils, thus providing a promising bio-adsorbent for environmental bioremediation.

Simultaneous removal of As(III) and Cu(II) from real bottom ash leachates by manganese-oxidizing aerobic granular sludge: Performance and mechanisms

Manganese-oxidizing aerobic granular sludge (Mn-AGS) is a novel extension of AGS technology to treat arsenic (As) in organic wastewater. In this study, Mn-AGS was first applied to treat real wastewater (bottom ash leachates) containing high levels of As(III) and Cu(II) in a sequencing batch reactor (SBR) for 91 days. Influent and effluent As(III), As(V), Cu(II), as well as pH and chemical oxygen demand (COD) were monitored daily, and sludge was collected regularly for morphological observation, chemical characterization, and microbial analysis. The results indicated that As(III) and Cu(II) could be efficiently removed from wastewater (∼83% and ∼100%, respectively), but the performance was sensitive to pH variation, especially for As(III). The removed As and Cu were mostly bound to carbonates (60.2 ± 2.0% and 70.0 ± 0.6%, respectively) and Fe/Mn oxides (28.2 ± 1.6% and 14.6 ± 0.5%, respectively) in the final sludge. Influent As(III) was partially oxidized into As(V), and high fractions of As(V) were obtained in the Fe/Mn oxide-bound phase. Unexpectedly, microbial analysis revealed that community richness was only slightly changed when the influent was acidized (pH 4.0) but greatly reduced after the influent pH back to 6.0. It could be explained by that acid-fast bacteria rapidly grew after pH recovery and eliminated non-acid-fast bacteria. This work further supported the practical application of Mn-AGS to treat As(III)-containing organic wastewaters.

Anti-bacterial Effects of MnO2 on the Enrichment of Manganese-oxidizing Bacteria in Downflow Hanging Sponge Reactors

We focused on the use of abiotic MnO2 to develop reactors for enriching manganese-oxidizing bacteria (MnOB), which may then be used to treat harmful heavy metal-containing wastewater and in the recovery of useful minor metals. Downflow hanging sponge (DHS) reactors were used under aerobic and open conditions to investigate the potential for MnOB enrichment. The results of an experiment that required a continuous supply of organic feed solution containing Mn(II) demonstrated that MnOB enrichment and Mn(II) removal were unsuccessful in the DHS reactor when plain sponge cubes were used. However, MnOB enrichment was successful within a very short operational period when sponge cubes initially containing abiotic MnO2 were installed. The results of a microbial community analysis and MnOB isolation revealed that MnOB belonging to Comamonadaceae or Pseudomonas played a major role in Mn(II) oxidation. Successful MnOB enrichment was attributed to several unidentified species of Chitinophagaceae and Gemmataceae, which were estimated to be intolerant of MnO2, being unable to grow on sponge cubes containing MnO2. The present results show that MnO2 exerted anti-bacterial effects and inhibited the growth of certain non-MnOB groups that were intolerant of MnO2, thereby enabling enriched MnOB to competitively consume more substrate than MnO2-intolerant bacteria.

Metal oxyanion removal from wastewater using manganese-oxidizing aerobic granular sludge

As, Sb, and Cr are redox-sensitive and toxic heavy metal(loid)s, and redox reactions are usually involved in the treatment of substrates containing these elements. In this study, manganese-oxidizing aerobic granular sludge (Mn-AGS) was obtained by continuously adding Mn(II) to the sludge in a sequencing batch reactor (SBR). Morphological observations, and analyses of extracellular polymeric substances (EPS), Mn valence-states, and microbial communities were performed on the resulting sludge. After 50 days of cultivation, biogenic Mn(III,IV) oxides (bio-MnO_x) accumulated up to approximately 25 mg Mn/g suspended solids (SS). X-ray photoelectron spectroscopy (XPS) revealed that the percentage of Mn(III,IV) was 87.6%. The protein (PN) component in EPS increased from 80.3 to 87.8 mg/g volatile suspended solids (VSS) during cultivation, which might be favorable for sludge granulation and heavy metal(loid) removal. Batch experiments showed that Mn-AGS was better at oxidizing As(III)/Sb(III) into less toxic As(V)/Sb(V) than traditional AGS. Remarkably, the results indicated that Mn-AGS did not oxidize Cr(III) but was able to reduce Cr(VI) into relatively harmless Cr(III). This work provided a new promising method with which to treat As(III), Sb(III), and Cr(VI) in wastewaters.

Coupling the phenolic oxidation capacities of a bacterial consortium and in situ-generated manganese oxides in a moving bed biofilm reactor (MBBR)

Phenolic wastewater containing phenol and 4-chlorophenol pose a risk to the environment and to human health. Treating them using chemical-biological coupling method is challenging. In this study, manganese oxidizing bacteria (MnOB) were enriched in moving bed biofilm reactor (MBBR) using synthetic phenol wastewater (800 mg L^-1) to facilitate in situ production of biogenic manganese oxides (BioMnOx) after 90 days of operation. Then, 4-chlorophenol (4-CP) was added to the MBBR to simulate mixed phenolic wastewater. Comparing the MBBR (R1) without feeding Mn(II) and the MBBR with BioMnOx (R2) production, R2 exhibited robust phenol and 4-CP removal performance. 16S rRNA gene sequencing was employed to determine the microbial community. Subsequently, a batch experiment demonstrated that partly purified BioMnOx does not exhibits a capacity for phenol removal, but can efficiently remove 4-CP. Interestingly, 5-chloro-2-hydroxymuconic semialdehyde was found in the products of 4-CP degradation, which was the unique product of 4-CP degradation by catechol 2,3-dioxygenase (C23O). In both reactors, only catechol 1,2-dioxygenase (C12O) activity from microbes can be detected, indicating that the existence of BioMnOx provide an alternative pathway in addition to microbe driven 4-CP degradation. Overall, MBBR based MnOB enrichment under high phenol concentration was achieved, and 4-CP/phenol removal can be accelerated by in situ-formed BioMnOx. Considering the C23O-like activity of BioMnOx, our results suggest a new coupling strategy that involves nanomaterials and a microbial consortium.

Removal of Manganese(II) from Acid Mine Wastewater: A Review of the Challenges and Opportunities with Special Emphasis on Mn-Oxidizing Bacteria and Microalgae

Many global mining activities release large amounts of acidic mine drainage with high levels of manganese (Mn) having potentially detrimental effects on the environment. This review provides a comprehensive assessment of the main implications and challenges of Mn(II) removal from mine drainage. We first present the sources of contamination from mineral processing, as well as the adverse effects of Mn on mining ecosystems. Then the comparison of several techniques to remove Mn(II) from wastewater, as well as an assessment of the challenges associated with precipitation, adsorption, and oxidation/filtration are provided. We also critically analyze remediation options with special emphasis on Mn-oxidizing bacteria (MnOB) and microalgae. Recent literature demonstrates that MnOB can efficiently oxidize dissolved Mn(II) to Mn(III, IV) through enzymatic catalysis. Microalgae can also accelerate Mn(II) oxidation through indirect oxidation by increasing solution pH and dissolved oxygen production during its growth. Microbial oxidation and the removal of Mn(II) have been effective in treating artificial wastewater and groundwater under neutral conditions with adequate oxygen. Compared to physicochemical techniques, the bioremediation of manganese mine drainage without the addition of chemical reagents is relatively inexpensive. However, wastewater from manganese mines is acidic and has low-levels of dissolved oxygen, which inhibit the oxidizing ability of MnOB. We propose an alternative treatment for manganese mine drainage that focuses on the synergistic interactions of Mn in wastewater with co-immobilized MnOB/microalgae.

Cultivation of a versatile manganese-oxidizing aerobic granular sludge for removal of organic micropollutants from wastewater

Organic micropollutants (OMPs) are frequently detected in water and wastewater, and have attracted wide attention due to potential adverse effects on ecosystems and human health. In this work, manganese-oxidizing aerobic granular sludge (Mn-AGS) was successfully cultivated and applied to remove OMPs from wastewater. Biogenic manganese (III,IV) oxides (bio-MnO_x) were generated and accumulated to 22.0-28.3 mg Mn/g SS in the final sludge. Neither the addition of allochthonous manganese-oxidizing bacteria (MnOB; Pseudomonas putida MnB1) nor the reduction in hydraulic retention time (HRT) facilitated the cultivation of Mn-AGS. Batch experiments of OMPs degradation indicated that Mn-AGS significantly improved (1.3-3.9 times) degradation rates of most OMPs. Removal rates of bisphenol A (BPA), 17α‑ethinylestradiol (EE2), tetracycline (TC), and chloramphenicol (CAP) were 3.0-12.6 μg/h/g SS by the traditional AGS and 8.0-16.3 μg/h/g SS by Mn-AGS; those of imazethapyr (IM) were relatively high, 64.7 ± 0.1 and 127.8 ± 2.5 μg/h/g SS by AGS and Mn-AGS, respectively. However, degradation of dichlorophenyl phosphine (DCPP) was slower by Mn-AGS than AGS, 9.0 ± 0.4 vs. 21.2 ± 0.9 μg/h/g SS, possibly due to inhibition of microbial activity by bio-MnO_x. This work provides a promising method for treating OMPs in organic wastewater, but the possible inhibition of microbes by bio-MnO_x should be noted.

Multiple-pathway arsenic oxidation and removal from wastewater by a novel manganese-oxidizing aerobic granular sludge

Aerobic granular sludge (AGS) is a powerful biotechnology to remove various heavy metal(loid)s from wastewater, but not including arsenic (As). In this study, a novel manganese-oxidizing aerobic granular sludge (Mn-AGS) was developed to remove As from organic wastewater. Eight sequencing batch reactors (SBRs) were operated in duplicate to investigate the feasibility of As removal by Mn-AGS. The immobilized As in the granular sludge was characterized by sequencing extraction, X-ray photoelectron spectroscopy (XPS), X-ray diffraction (XRD), scanning electron microscopy-energy dispersive spectroscopy (SEM-EDS), and Raman spectroscopy. Oxidation pathways for As and their contributions in Mn-AGS were evaluated by seven batch experiments under different conditions. The results indicated that As removal efficiency was much higher by Mn-AGS than by AGS. In Mn-AGS, As(III) was efficiently oxidized into As(V) (74.6%-82.6%) and then mostly bound on amorphous ferrihydrite and biogenic Mn oxides (bio-MnO_x) (56.2%-65.0%), while metal arsenates, such as ferric arsenate, were not detected. Importantly, As removal was greatly improved by a small addition of Fe(II) in Mn-AGS. This might be primarily caused by Fenton reactions, because this improvement was removed when H₂O₂, self-generated in Mn-AGS, was scavenged by exogenous catalase (CAT). This study provided a novel extension of the traditional AGS technology to treat As in organic wastewater with an acceptable degree of efficiency.

Plant-microbial synergism: An effective approach for the remediation of shale-gas fracturing flowback and produced water

Effective and affordable treatment of hydraulic fracturing flowback and produced water (FPW) is a major challenge for the sustainability of unconventional shale-gas exploration and development. We investigated the effectiveness of different combinations of activated sludge (AS), three microbial preparations, and ten plants (ryegrass, water dropwort, typha, reed, iris, canna, water caltrop, rape, water spinach, and Alternanthera philoxeroides) on the treatment performance of FPW. Water quality parameters (NH₄-N, NO₃-N, NO₂-N, COD_cr, and BOD) and the algal toxicity of the treated FPW were used as metrics to assess the treatment efficiency. The results showed that AS had higher treatment efficiency than the prepared microorganisms, and water dropwort was the best plant candidate for boosting performance of AS treatment of FPW. The treated FPW showed improved water quality and microbial diversity. The Shannon-Wiener index increased from 4.76 to 7.98 with FPW treatment. The relative abundance of microbes with a greater resistance to high salt conditions, such as Bacteroidetes, Firmicutes, Chloroflexi, increased substantially in the treated FPW. The combination of water dropwort and AS showed the greatest improvement in water quality, the highest algal density and microbial diversity, thus indicating good potential for this candidate in the treatment of FPW.

Characterization of downflow hanging sponge reactors with regard to structure, process function, and microbial community compositions

The activated sludge (AS) process has been the most widely used process for wastewater treatment despite it has several limitations for its further application and adoption worldwide, owing to unsustainable properties such as high-energy consumption and the production of large amount of excess sludge. To overcome the drawbacks of the AS process, the downflow hanging sponge (DHS) has been developed as an energy-saving and easy-to-maintain alternative. To date, six types of different sponge configurations have been developed and their performances have been evaluated in practical- to full-scale DHS reactors. A large number of studies have been carried out in order to enhance the performance and expand the application fields of the DHS. Transition of this process to the deployment and diffusion stage from the research and development phase is now ongoing in India and Egypt as well as in Japan. Under this situation, concise and state-of-the art review is important for enhancing DHS research and future applications. Herein, we summarize and present the DHS concerning the history of development, the mechanism of treatment, recent studies on its use in the field of wastewater treatment, and the features of microbial community structure.

Draft Genome Sequence of Mn(II)-Oxidizing Pseudomonas resinovorans Strain MO-1

Pseudomonas resinovorans strain MO-1, which possesses a high ability to oxidize Mn(II), has been isolated from oligotrophic pond sediment. The draft genome sequence consists of 6,252,942 bp and has a G+C content of 63.4%. Strain MO-1 has 5,694 coding sequences, including 13 putative Mn(II) oxidation genes.