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Qin W, Stärk HJ, Müller S, Reemtsma T. Exploring the Extent of Phosphorus and Heavy Metal Uptake by Single Cells of Saccharomyces cerevisiae and Their Effects on Intrinsic Elements by SC-ICP-TOF-MS. Front Microbiol 2022; 13:870931. [PMID: 35547146 PMCID: PMC9082303 DOI: 10.3389/fmicb.2022.870931] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2022] [Accepted: 03/21/2022] [Indexed: 11/13/2022] Open
Abstract
The effect of six heavy metals, namely, silver (Ag), lead (Pb), palladium (Pd), copper (Cu), nickel (Ni), and chromium (Cr), on phosphorus (P) uptake by yeast was investigated by single-cell analysis using inductively coupled plasma time-of-flight mass spectrometry (SC-ICP-TOF-MS). It was found that the P content in cells with 1.55 g L–1 P feeding after P starvation was increased by ∼70% compared to control cells. Heavy metals at 10 ppm, except Cu, had a negative impact on P accumulation by cells. Pd reduced the P content by 26% in single cells compared to control cells. Metal uptake was strongest for Ag and Pd (0.7 × 10–12 L cell–1) and weakest for Cr (0.05 × 10–12 L cell–1). Exposure to Cr markedly reduced (−50%) Mg in cells and had the greatest impact on the intrinsic element composition. The SC-ICP-TOF-MS shows the diversity of elemental content in single cells: for example, the P content under standard conditions varied between 12.4 and 890 fg cell–1. This technique allows studying both the uptake of elements and sublethal effects on physiology at a single-cell level.
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Affiliation(s)
- Wen Qin
- Department of Analytical Chemistry, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany
| | - Hans-Joachim Stärk
- Department of Analytical Chemistry, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany
| | - Susann Müller
- Department of Environmental Microbiology, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany
| | - Thorsten Reemtsma
- Department of Analytical Chemistry, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.,Institute of Analytical Chemistry, University of Leipzig, Leipzig, Germany
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Luo C, Liu A, Long W, Liao H, Yang Y. Transcriptome analysis of Cyrtotrachelus buqueti in two cities in China. Gene 2018; 647:1-12. [PMID: 29274908 DOI: 10.1016/j.gene.2017.12.041] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2017] [Revised: 12/14/2017] [Accepted: 12/20/2017] [Indexed: 12/20/2022]
Abstract
In order to reduce the Cyrtotrachelus buqueti population, which is a serious pest in the bamboo industry, a range of approaches is required, which will be dependent on diverse gene expression influenced by environmental factors. In this study, samples from two regions of China, Muchuan in Sichuan Province and Chishui in Guizhou Province, were investigated through RNA-seq. Approximately 44 million high-quality reads were generated and 94.2% of the data was mapped to the transcriptome. A total of 15,641 out of the 29,406 identified genes were predicted. Moreover, 348 genes were differentially expressed between the two groups of imagoes (77 upregulated and 271 downregulated). The functional analysis showed that these genes were significantly enriched in the ribosome and metabolic pathway categories. The candidate genes contributing to the reduction in C. buqueti included 41 genes involved in the ribosome constitution category, five in the one‑carbon pool pathway by folate category, and five heat shock protein genes. The downregulation of these candidate genes seems to have impaired metabolic processes, such as protein, DNA, RNA, and purine synthesis, as well as carbon and folate metabolism, subsequently resulting in the observed population reduction of C. buqueti. Furthermore, temperature, heavy metal content, and pH might influence the population by altering the expressions of genes involved in these metabolic processes.
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Affiliation(s)
- Chaobing Luo
- Bamboo Diseases and Pests Control and Resources Development Key Laboratory of Sichuan Province, Leshan Normal University, Leshan 614000, Sichuan, China; College of Life Science, Leshan Normal University, Leshan 614000, Sichuan, China
| | - Anxuan Liu
- Bamboo Diseases and Pests Control and Resources Development Key Laboratory of Sichuan Province, Leshan Normal University, Leshan 614000, Sichuan, China; College of Life Science, Leshan Normal University, Leshan 614000, Sichuan, China; College of Food and Bioengineering, Xihua University, Chengdu 6110039, Sichuan, China
| | - Wencong Long
- Bamboo Diseases and Pests Control and Resources Development Key Laboratory of Sichuan Province, Leshan Normal University, Leshan 614000, Sichuan, China; College of Life Science, Leshan Normal University, Leshan 614000, Sichuan, China; College of Food and Bioengineering, Xihua University, Chengdu 6110039, Sichuan, China
| | - Hong Liao
- Bamboo Diseases and Pests Control and Resources Development Key Laboratory of Sichuan Province, Leshan Normal University, Leshan 614000, Sichuan, China; College of Life Science, Leshan Normal University, Leshan 614000, Sichuan, China; College of Food and Bioengineering, Xihua University, Chengdu 6110039, Sichuan, China
| | - Yaojun Yang
- Bamboo Diseases and Pests Control and Resources Development Key Laboratory of Sichuan Province, Leshan Normal University, Leshan 614000, Sichuan, China.
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Ksheminska HP, Gayda GZ, Ivash MF, Gonchar MV. Chromate-resistant mutants of the yeast Pichia guilliermondii: Selection and properties. Microbiology (Reading) 2011. [DOI: 10.1134/s0026261711030131] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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The positive response of Ty1 retrotransposition test to carcinogens is due to increased levels of reactive oxygen species generated by the genotoxins. Arch Toxicol 2010; 85:67-74. [DOI: 10.1007/s00204-010-0542-8] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2010] [Accepted: 04/01/2010] [Indexed: 01/25/2023]
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Chatterjee N, Luo Z. Cr-(III)-organic compounds treatment causes genotoxicity and changes in DNA and protein level in Saccharomyces cerevisiae. ECOTOXICOLOGY (LONDON, ENGLAND) 2010; 19:593-603. [PMID: 20066492 DOI: 10.1007/s10646-009-0420-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 09/14/2009] [Indexed: 05/28/2023]
Abstract
Natural Cr-(III)-organic species are being known as the part of natural biogeochemical cycle of chromium, but unfortunately, their mechanism of toxicity as well as genotoxic potentiality is still unknown. To evaluate the characteristic toxic effect exerted by natural Cr-(III)-organic species on the cellular macromolecules, changes in DNA and protein level was observed. Besides, Comet assay was applied to measure genotoxic potentiality of Cr-(III)-organic species in the target organism Saccharomyces cerevisiae exposed to Cr-(III)-citrate and Cr-(III)-histidine. It has been observed that both of the Cr-(III)-organic compounds are responsible for diminution in macromolecules concentration. Cr-(III)-citrate showed ladder pattern of DNA fragmentation in support of apoptosis. Two new protein bands appeared in protein profile of the Saccharomyces cerevisiae treated with Cr-(III)-organic compounds. Thus it supports the possibility of the synthesis of stress proteins. Comet assay proved positive correlation between Cr-(III)-organic compounds' concentration and DNA damage. The Cr-(III)-citrate causes DNA damage at the concentrations ranging from 50 to 150 mg L(-1), whereas the DNA damaging capacity of Cr-(III)-histidine was found insignificant, except at highest concentration (150 mg L(-1)). These results can throw light on the mechanism of the toxic effect as well as genotoxicity exerted by natural Cr-(III)-organic species.
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Affiliation(s)
- Nivedita Chatterjee
- Key Laboratory of Biogeology and Environmental Geology, Ministry of Education (BGEG), School of Environmental Studies, China University of Geosciences, 388 Lumo Road, Wuhan, Hubei, 430074, China.
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Osterc A, Fujs Å, Raspor P, Stibilj V. Saccharomyces cerevisiae: the effect of different forms and concentrations of iodine on uptake and yeast growth. FEMS Yeast Res 2009; 9:45-51. [DOI: 10.1111/j.1567-1364.2008.00449.x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022] Open
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Li Z, Yuan H, Hu X. Cadmium-resistance in growing Rhodotorula sp. Y11. BIORESOURCE TECHNOLOGY 2008; 99:1339-44. [PMID: 17376676 DOI: 10.1016/j.biortech.2007.02.004] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2006] [Revised: 02/01/2007] [Accepted: 02/01/2007] [Indexed: 05/14/2023]
Abstract
The uptake of cadmium and responses to this metal were studied in growing Rhodotorula sp. Y11. In presence of cadmium, Y11 showed a similar lag phase with decreased mu(max) in comparison to the control cultures in the absence of cadmium. Different changes in contents of cell elemental composition (carotenoids, total protein, total soluble sugar, and phosphate content) were observed under cadmium pressure. Growing Rhodotorula sp. Y11 took up cadmium in a biphasic mode, involving an initial energy-independent biosorption to the cell surface, followed by a slower energy-dependent intracellular accumulation. In the presence of metabolic inhibitors, intracellular cadmium uptake of growing Y11 was significantly influenced.
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Affiliation(s)
- ZhiJian Li
- College of Biological Sciences, Key Laboratory of Agro-Microbial Resource and Application, Ministry of Agriculture, China Agricultural University, Beijing 100094, People's Republic of China
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Koçberber N, Dönmez G. Chromium(VI) bioaccumulation capacities of adapted mixed cultures isolated from industrial saline wastewaters. BIORESOURCE TECHNOLOGY 2007; 98:2178-83. [PMID: 17049232 DOI: 10.1016/j.biortech.2006.08.017] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2004] [Revised: 08/15/2006] [Accepted: 08/30/2006] [Indexed: 05/12/2023]
Abstract
Enrichment mixed cultures tolerating relatively high concentrations of chromium and salt ions were isolated and their bioaccumulation properties improved by adaptation. Mixed cultures were enriched in Nutrient Broth media containing 25-300 mg l(-1) Cr(VI) and 0%, 2%, 4%, 6% (w/v) NaCl. Bioaccumulation of Cr(VI) was studied in a batch system as a function of initial pH (7, 8 and 9), Cr(VI) and NaCl concentrations. Increasing NaCl and Cr(VI) concentrations led to significant decreases in percentage uptake and dried weight of mixed cultures but increased maximum specific chromium uptake. The maximum specific chromium uptake value at pH 8 was 58.9 mg g(-1) for 316.1 mg l(-1) Cr(VI) in the absence of NaCl, while at pH 9 it was 130.1 mg g(-1) in media including 194.5 mg l(-1) Cr(VI) and 2% NaCl concentrations. At 4% NaCl, the maximum Cr(VI) uptake of 127.0 mg g(-1) for 221.1 mg l(-1) Cr(VI) occurred at pH 9, while at 6% NaCl the maximum Cr(VI) uptake of 114.9 mg g(-1) for 278.1 mg l(-1) Cr(VI) was found at pH 7.
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Affiliation(s)
- Nur Koçberber
- Ankara University, Faculty of Science, Department of Biology, 06100 Beşevler, Ankara, Turkey
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