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Palomba M, Franco Coelho Dias I, Rosati O, Marini F. Modern Synthetic Strategies with Organoselenium Reagents: A Focus on Vinyl Selenones. Molecules 2021; 26:molecules26113148. [PMID: 34070372 PMCID: PMC8197542 DOI: 10.3390/molecules26113148] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Revised: 05/20/2021] [Accepted: 05/21/2021] [Indexed: 11/16/2022] Open
Abstract
In recent years, vinyl selenones were rediscovered as useful building blocks for new synthetic transformations. This review will highlight these advances in the field of multiple-bond-forming reactions, one-pot synthesis of carbo- and heterocycles, enantioselective construction of densely functionalized molecules, and total synthesis of natural products.
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2
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Rico L, Hanessian S. Synthesis of 1',2'-methano-2',3'-dideoxynucleosides as potential antivirals. Bioorg Med Chem Lett 2018; 29:597-600. [PMID: 30612845 DOI: 10.1016/j.bmcl.2018.12.054] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Revised: 12/20/2018] [Accepted: 12/22/2018] [Indexed: 02/05/2023]
Abstract
The synthesis of constrained nucleosides has become an important tool to understand the SAR in the interaction between biological and synthetic nucleotides in the context of antisense oligonucleotide therapy. The incorporation of a cyclopropane into a furanose ring of a nucleoside induces some degree of constrain without affecting significantly the steric environment of a nucleoside. Here, we report a new, short and stereocontrolled synthesis of two constrained nucleosides analogues, 1',2'- methano-2',3'-dideoxyuridine 9, and the corresponding cytidine analog 12. X-ray crystallography revealed that the furanose ring in the constrained uridine and cytidine analogues was flattened with virtual loss of pseudorotation. The phosphoramidate esters of the novel constrained uridine and cytidine nucleosides, intended as prodrugs, were tested in cell-based assays for viral replication across the herpes virus family and HIV inhibition courtesy of Merck laboratories, Rahway. They were also tested in antiproliferative assays against colorectal and melanoma cell lines. Unfortunately, none of the compounds showed activity in these assays.
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Affiliation(s)
- Lorena Rico
- Department of Chemistry, Université de Montréal, C.P. 6128, Succursale Centre-Ville, Montréal, Québec H3C 3J7, Canada
| | - Stephen Hanessian
- Department of Chemistry, Université de Montréal, C.P. 6128, Succursale Centre-Ville, Montréal, Québec H3C 3J7, Canada.
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3
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Palomba M, Trappetti F, Bagnoli L, Santi C, Marini F. Oxone-Mediated Oxidation of Vinyl Selenides in Water. European J Org Chem 2018. [DOI: 10.1002/ejoc.201800498] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Martina Palomba
- Department of Pharmaceutical Sciences; Group of Catalysis and Organic Green Chemistry; University of Perugia; Via del Liceo, 1 06123 Perugia Italy
| | - Francesco Trappetti
- Department of Pharmaceutical Sciences; Group of Catalysis and Organic Green Chemistry; University of Perugia; Via del Liceo, 1 06123 Perugia Italy
| | - Luana Bagnoli
- Department of Pharmaceutical Sciences; Group of Catalysis and Organic Green Chemistry; University of Perugia; Via del Liceo, 1 06123 Perugia Italy
| | - Claudio Santi
- Department of Pharmaceutical Sciences; Group of Catalysis and Organic Green Chemistry; University of Perugia; Via del Liceo, 1 06123 Perugia Italy
| | - Francesca Marini
- Department of Pharmaceutical Sciences; Group of Catalysis and Organic Green Chemistry; University of Perugia; Via del Liceo, 1 06123 Perugia Italy
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4
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Buyck T, Pasche D, Wang Q, Zhu J. Synthesis of Oxazolidin-2-ones by Oxidative Coupling of Isonitriles, Phenyl Vinyl Selenone, and Water. Chemistry 2016; 22:2278-81. [PMID: 26683868 DOI: 10.1002/chem.201505050] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2015] [Indexed: 12/17/2022]
Abstract
Reaction of alkyl isocyanides, phenyl vinyl selenone, and water in the presence of a catalytic amount of Cs2 CO3 afforded oxazolidin-2-ones in good yields. This unprecedented heteroannulation process created four chemical bonds in a single operation with the isocyano group acting formally as a polarized double bond and phenyl vinyl selenone as a latent 1,3-dipole. The phenylselenonyl group played a triple role as an electron-withdrawing group to activate the 1,4-addition, a leaving group, and a latent oxidant in this transformation.
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Affiliation(s)
- Thomas Buyck
- Laboratory of Synthesis and Natural Products, école Polytechnique Fédérale de Lausanne, EPFL-SB-ISIC-LSPN, BCH 5304, 1015, Lausanne, Switzerland
| | - Delphine Pasche
- Laboratory of Synthesis and Natural Products, école Polytechnique Fédérale de Lausanne, EPFL-SB-ISIC-LSPN, BCH 5304, 1015, Lausanne, Switzerland
| | - Qian Wang
- Laboratory of Synthesis and Natural Products, école Polytechnique Fédérale de Lausanne, EPFL-SB-ISIC-LSPN, BCH 5304, 1015, Lausanne, Switzerland
| | - Jieping Zhu
- Laboratory of Synthesis and Natural Products, école Polytechnique Fédérale de Lausanne, EPFL-SB-ISIC-LSPN, BCH 5304, 1015, Lausanne, Switzerland.
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Clarkson R, Komsta Z, Mayes BA, Moussa A, Shelbourne M, Stewart A, Tyrrell AJ, Wallis LL, Weymouth-Wilson AC. Synthesis of 2,3-Dideoxy-2-fluoro-2,3-endo-methylene- and 2,3-Dideoxy-2-fluoro-3-C-hydroxymethyl-2,3-endo-methylene-pentofuranoses and Their Use in the Preparation of Conformationally Locked Bicyclic Nucleosides. J Org Chem 2015; 80:2198-215. [DOI: 10.1021/jo502712g] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Rob Clarkson
- Dextra, Science
and Technology Centre, Earley Gate, Whiteknights Road, Reading, RG6 6BZ, U.K
| | - Zofia Komsta
- Dextra, Science
and Technology Centre, Earley Gate, Whiteknights Road, Reading, RG6 6BZ, U.K
| | - Benjamin A. Mayes
- Idenix Pharmaceuticals, 320
Bent Street, Cambridge, Massachusetts 02141, United States
| | - Adel Moussa
- Idenix Pharmaceuticals, 320
Bent Street, Cambridge, Massachusetts 02141, United States
| | - Montserrat Shelbourne
- Dextra, Science
and Technology Centre, Earley Gate, Whiteknights Road, Reading, RG6 6BZ, U.K
| | - Alistair Stewart
- Idenix Pharmaceuticals, 320
Bent Street, Cambridge, Massachusetts 02141, United States
| | - Andrew J. Tyrrell
- Dextra, Science
and Technology Centre, Earley Gate, Whiteknights Road, Reading, RG6 6BZ, U.K
| | - Laura L. Wallis
- Dextra, Science
and Technology Centre, Earley Gate, Whiteknights Road, Reading, RG6 6BZ, U.K
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6
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Komsta Z, Mayes BA, Moussa A, Shelbourne M, Stewart A, Tyrrell AJ, Wallis LL, Weymouth-Wilson AC, Yurek-George A. Stereoselective Cyclopropanation in the Synthesis of 3′-Deoxy-3′-C-hydroxymethyl-2′,3′-methylene-uridine. Org Lett 2014; 16:4878-80. [DOI: 10.1021/ol502383c] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Zofia Komsta
- Dextra, Science
and Technology Centre, Earley Gate,
Whiteknights Road, Reading, RG6 6BZ, U.K
| | - Benjamin A. Mayes
- Idenix Pharmaceuticals, 320 Bent Street, Cambridge, Massachusetts 02141, United States
| | - Adel Moussa
- Idenix Pharmaceuticals, 320 Bent Street, Cambridge, Massachusetts 02141, United States
| | - Montserrat Shelbourne
- Dextra, Science
and Technology Centre, Earley Gate,
Whiteknights Road, Reading, RG6 6BZ, U.K
| | - Alistair Stewart
- Idenix Pharmaceuticals, 320 Bent Street, Cambridge, Massachusetts 02141, United States
| | - Andrew J. Tyrrell
- Dextra, Science
and Technology Centre, Earley Gate,
Whiteknights Road, Reading, RG6 6BZ, U.K
| | - Laura L. Wallis
- Dextra, Science
and Technology Centre, Earley Gate,
Whiteknights Road, Reading, RG6 6BZ, U.K
| | | | - Alexander Yurek-George
- Dextra, Science
and Technology Centre, Earley Gate,
Whiteknights Road, Reading, RG6 6BZ, U.K
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7
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Bhaumik A, Samanta S, Pathak T. Enantiopure 1,4,5-trisubstituted 1,2,3-triazoles from carbohydrates: applications of organoselenium chemistry. J Org Chem 2014; 79:6895-904. [PMID: 25010213 DOI: 10.1021/jo5009564] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A wide range of stable vinyl selenone-modified furanosides has been synthesized for the first time. These 2π-partners undergo 1,3-dipolar cycloaddition reactions with a wide range of organic azides to afford enantiopure trisubstituted triazoles. Furanosyl rings opened up during triazole synthesis to generate polyfunctionalized molecules, ready to undergo further transformations. This strategy is one of the most convenient methods for the synthesis of enantiopure 1,4,5-trisubstituted 1,2,3-triazoles where the chiral components are attached to C-4 or C-5 position of triazole ring. These triazoles are formed in a regioselective manner, and several pairs of regioisomeric triazoles have also been synthesized. The approach affords densely functionalized triazoles, which are amenable to further modifications because of the presence of aldehyde and hydroxyl groups. This powerful and practical route adds to the arsenals of chemists and biologists interested in the synthesis and applications of triazoles.
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Affiliation(s)
- Atanu Bhaumik
- Department of Chemistry, Indian Institute of Technology Kharagpur , Kharagpur 721302, India
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8
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Singh R, Vince R. 2-Azabicyclo[2.2.1]hept-5-en-3-one: Chemical Profile of a Versatile Synthetic Building Block and its Impact on the Development of Therapeutics. Chem Rev 2012; 112:4642-86. [DOI: 10.1021/cr2004822] [Citation(s) in RCA: 96] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Rohit Singh
- Center for Drug Design, Academic Health Center, University of Minnesota, 516 Delaware Street Southeast,
Minneapolis, MN 55455, United States
| | - Robert Vince
- Center for Drug Design, Academic Health Center, University of Minnesota, 516 Delaware Street Southeast,
Minneapolis, MN 55455, United States
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9
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Lebreton J, Escudier JM, Arzel L, Len C. Synthesis of Bicyclonucleosides Having a C−C Bridge. Chem Rev 2010; 110:3371-418. [DOI: 10.1021/cr800465j] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Jacques Lebreton
- Université de Nantes, CNRS, Laboratoire CEISAM-UMR-CNRS 6230, Faculté des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France, Université Paul Sabatier Laboratoire de Synthèse et Physicochimie des Molécules d’Intérêt Biologique - UMR-CNRS 5068, 31062 Toulouse Cedex, France, and Université de Technologie de Compiègne, Ecole Supérieure de Chimie Organique Minérale, EA 4297, Transformations Intégrées de la Matière Renouvelable, 1 allée du Réseau Jean-Marie Buckmaster,
| | - Jean-Marc Escudier
- Université de Nantes, CNRS, Laboratoire CEISAM-UMR-CNRS 6230, Faculté des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France, Université Paul Sabatier Laboratoire de Synthèse et Physicochimie des Molécules d’Intérêt Biologique - UMR-CNRS 5068, 31062 Toulouse Cedex, France, and Université de Technologie de Compiègne, Ecole Supérieure de Chimie Organique Minérale, EA 4297, Transformations Intégrées de la Matière Renouvelable, 1 allée du Réseau Jean-Marie Buckmaster,
| | - Laurence Arzel
- Université de Nantes, CNRS, Laboratoire CEISAM-UMR-CNRS 6230, Faculté des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France, Université Paul Sabatier Laboratoire de Synthèse et Physicochimie des Molécules d’Intérêt Biologique - UMR-CNRS 5068, 31062 Toulouse Cedex, France, and Université de Technologie de Compiègne, Ecole Supérieure de Chimie Organique Minérale, EA 4297, Transformations Intégrées de la Matière Renouvelable, 1 allée du Réseau Jean-Marie Buckmaster,
| | - Christophe Len
- Université de Nantes, CNRS, Laboratoire CEISAM-UMR-CNRS 6230, Faculté des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France, Université Paul Sabatier Laboratoire de Synthèse et Physicochimie des Molécules d’Intérêt Biologique - UMR-CNRS 5068, 31062 Toulouse Cedex, France, and Université de Technologie de Compiègne, Ecole Supérieure de Chimie Organique Minérale, EA 4297, Transformations Intégrées de la Matière Renouvelable, 1 allée du Réseau Jean-Marie Buckmaster,
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10
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Díaz-Rodríguez A, Sanghvi YS, Fernández S, Schinazi RF, Theodorakis EA, Ferrero M, Gotor V. Synthesis and anti-HIV activity of conformationally restricted bicyclic hexahydroisobenzofuran nucleoside analogs. Org Biomol Chem 2009; 7:1415-23. [PMID: 19300828 DOI: 10.1039/b818707j] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A chiral synthesis of a series of hexahydroisobenzofuran (HIBF) nucleosides has been accomplished via glycosylation of a stereo-defined (syn-isomer) sugar motif 16 with the appropriate silylated bases. All nucleoside analogs were obtained in 52-71% yield as a mixture of alpha- and beta-anomeric products increasing the breadth of the novel nucleosides available for screening. The structure of the novel bicyclic HIBF nucleosides was established by a single crystal X-ray structure of the beta-HIBF thymine analog 22b. Furthermore, the sugar conformation for these nucleosides was established as N-type. Among the novel HIBF nucleosides synthesized, twenty-five compounds were tested as inhibitor of HIV-1 in human peripheral blood mononuclear (PBM) cells and seven were found to be active (EC(50) = 12.3-36.2 microM). Six of these compounds were purine analogs with beta-HIBF inosine analog 22o being the most potent (EC(50) = 12.3 microM) among all compounds tested. The striking resemblance between didanosine (ddI) and 22o may explain the potent anti-HIV activity.
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Affiliation(s)
- Alba Díaz-Rodríguez
- Departamento de Química Orgánica e Inorgánica and Instituto Universitario de Biotecnología de Asturias, Universidad de Oviedo, 33006-Oviedo (Asturias), Spain
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11
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Sard H. Synthesis and Antiviral Activity of the Cyclopropano Homolog of 2,3-Didehydro-2,3-dideoxythymidine. ACTA ACUST UNITED AC 2006. [DOI: 10.1080/15257779408013223] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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12
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Mossé S, Alexakis A. First Organocatalyzed Asymmetric Michael Addition of Aldehydes to Vinyl Sulfones. Org Lett 2005; 7:4361-4. [PMID: 16178533 DOI: 10.1021/ol051488h] [Citation(s) in RCA: 166] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
[reaction: see text] The first asymmetric direct Michael addition of aldehydes to vinyl sulfones catalyzed by N-iPr-2,2'-bipyrrolidine is described. 1,4-Adducts are obtained in good yields and enantioselectivities. The determination of absolute configuration allowed us to postulate a Si,Si transition state model, as shown previously for nitroolefins.
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Affiliation(s)
- Sarah Mossé
- Department of Organic Chemistry, University of Geneva, Quai Ernest Ansermet 30, CH-1211 Geneva, Switzerland
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13
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Lebel H, Marcoux JF, Molinaro C, Charette AB. Stereoselective cyclopropanation reactions. Chem Rev 2003; 103:977-1050. [PMID: 12683775 DOI: 10.1021/cr010007e] [Citation(s) in RCA: 1428] [Impact Index Per Article: 68.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Hélène Lebel
- Département de Chimie, Université de Montréal, Montréal, Québec, Canada H3C 3J7
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14
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Affiliation(s)
- Robert J Ferrier
- Industrial Research Ltd., P.O. Box 31 310, Lower Hutt, New Zealand
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15
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Chun BK, Olgen S, Hong JH, Newton MG, Chu CK. Enantiomeric syntheses of conformationally restricted D- and L-2', 3'-dideoxy-2',3'-endo-methylene nucleosides from carbohydrate chiral templates. J Org Chem 2000; 65:685-93. [PMID: 10813998 DOI: 10.1021/jo991212l] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
D- and L-2',3'-dideoxy-2',3'-endo-methylene nucleosides were synthesized as potential antiviral agents. The key intermediates 5-O-tert-butyldiphenylsilyl-D- and L-2,3-dideoxy-2, 3-endo-methylenepentofuranoses (20 and 33, respectively) were obtained by selective protection of the D- and L-2,3-dideoxy-2, 3-endo-methylenepentose derivatives 19 and 32 which were prepared from 1,2:5,6-di-O-isopropylidene-D-mannitol and L-gulonic gamma-lactone, respectively, and converted to 5-O-tert-butyldiphenylsilyl-D- and L-2,3-dideoxy-2, 3-endo-methylenepentofuranosyl acetates (21 and 34, respectively) or the chlorides 22 and 35. The acetates and chlorides were condensed with pyrimidine and purine bases by Vorbrüggen conditions or S(N)2-type condensation. Vorbrüggen conditions using the acetates gave mostly alpha-isomers. In contrast, S(N)2-type condensation using the chlorides greatly improved the beta/alpha ratio. From the synthesis, several D- and L-2',3'-dideoxy-2',3'-endo-methylene nucleoside analogues have been obtained, and their structures have been elucidated by NMR spectroscopy and X-ray crystallography. The synthesized D- and L-adenine derivatives were tested as substrates of adenosine deaminase, which indicated that the D-adenosine derivative 4a was a good substrate of a mammalian adenosine deaminase from calf intestinal mucosa (EC 3.5.4.4) while its L-enantiomer 10a was a poor substrate. Either the D-adenine derivative 4a or its L-enantiomer 10a did not serve as an inhibitor of the enzyme.
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Affiliation(s)
- B K Chun
- Department of Pharmaceutical and Biomedical Sciences, College of Pharmacy, The University of Georgia, Athens, Georgia 30602, USA
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16
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Preparation and reactions of 2′- and 3′-vinyl bromides of uracil-nucleosides: versatile synthons for anti-hiv agents. Tetrahedron Lett 1991. [DOI: 10.1016/s0040-4039(00)92715-1] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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