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Frouin-Mouy H, Rountree R, Juanes F, Aguzzi J, De Leo FC. Deep-sea cabled video-observatory provides insights into the behavior at depth of sub-adult male northern elephant seals, Mirounga angustirostris. PLoS One 2024; 19:e0308461. [PMID: 39231116 PMCID: PMC11373836 DOI: 10.1371/journal.pone.0308461] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2024] [Accepted: 07/24/2024] [Indexed: 09/06/2024] Open
Abstract
The Ocean Networks Canada (ONC) cabled video-observatory at the Barkley Canyon Node (British Columbia, Canada) was recently the site of a Fish Acoustics and Attraction Experiment (FAAE), from May 21, 2022 to July 16, 2023, combining observations from High-Definition (HD) video, acoustic imaging sonar, and underwater sounds at a depth of 645 m, to examine the effects of light and bait on deep-sea fish and invertebrate behaviors. The unexpected presence of at least eight (six recurrent and two temporary) sub-adult male northern elephant seals (Mirounga angustirostris) was reported in 113 and 210 recordings out of 9737 HD and 2805 sonar videos at the site, respectively. Elephant seals were found at the site during seven distinct periods between June 22, 2022 and May 19, 2023. Ethograms provided insights into the seal's deep-sea resting and foraging strategies, including prey selection. We hypothesized that the ability of elephant seals to perform repeated visits to the same site over long periods (> 10 days) was due to the noise generated by the sonar, suggesting that they learned to use that anthropogenic source as an indicator of food location, also known as the "dinner bell" effect. One interpretation is that elephant seals are attracted to the FAAE site due to the availability of prey and use the infrastructure as a foraging and resting site, but then take advantage of fish disturbance caused by the camera lights to improve foraging success. Our video observations demonstrated that northern elephant seals primarily focused on actively swimming sablefish (Anoplopoma fimbria), ignoring stationary or drifting prey. Moreover, we found that elephant seals appear to produce (voluntary or involuntary) infrasonic sounds in a foraging context. This study highlights the utility of designing marine observatories with spatially and temporally cross-referenced data collection from instruments representing multiple modalities of observation.
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Affiliation(s)
- Héloïse Frouin-Mouy
- Cooperative Institute for Marine and Atmospheric Studies, University of Miami, Miami, Florida, United States of America
- Department of Biology, University of Victoria, Victoria, British Columbia, Canada
| | - Rodney Rountree
- Department of Biology, University of Victoria, Victoria, British Columbia, Canada
- The Fish Listener, Waquoit, Massachusetts, United States of America
| | - Francis Juanes
- Department of Biology, University of Victoria, Victoria, British Columbia, Canada
| | - Jacopo Aguzzi
- Instituto de Ciencias del Mar (ICM-CSIC), Barcelona, Spain
| | - Fabio C De Leo
- Department of Biology, University of Victoria, Victoria, British Columbia, Canada
- Ocean Networks Canada, University of Victoria, Victoria, British Columbia, Canada
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2
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ElGrawani W, Sun G, Kliem FP, Sennhauser S, Pierre-Ferrer S, Rosi-Andersen A, Boccalaro I, Bethge P, Heo WD, Helmchen F, Adamantidis AR, Forger DB, Robles MS, Brown SA. BDNF-TrkB signaling orchestrates the buildup process of local sleep. Cell Rep 2024; 43:114500. [PMID: 39046880 DOI: 10.1016/j.celrep.2024.114500] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2023] [Revised: 05/15/2024] [Accepted: 06/27/2024] [Indexed: 07/27/2024] Open
Abstract
Sleep debt accumulates during wakefulness, leading to increased slow wave activity (SWA) during sleep, an encephalographic marker for sleep need. The use-dependent demands of prior wakefulness increase sleep SWA locally. However, the circuitry and molecular identity of this "local sleep" remain unclear. Using pharmacology and optogenetic perturbations together with transcriptomics, we find that cortical brain-derived neurotrophic factor (BDNF) regulates SWA via the activation of tyrosine kinase B (TrkB) receptor and cAMP-response element-binding protein (CREB). We map BDNF/TrkB-induced sleep SWA to layer 5 (L5) pyramidal neurons of the cortex, independent of neuronal firing per se. Using mathematical modeling, we here propose a model of how BDNF's effects on synaptic strength can increase SWA in ways not achieved through increased firing alone. Proteomic analysis further reveals that TrkB activation enriches ubiquitin and proteasome subunits. Together, our study reveals that local SWA control is mediated by BDNF-TrkB-CREB signaling in L5 excitatory cortical neurons.
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Affiliation(s)
- Waleed ElGrawani
- Institute of Pharmacology and Toxicology, University of Zurich, Zurich, Switzerland; Neuroscience Center Zurich (ZNZ), University of Zurich, Zurich, Switzerland.
| | - Guanhua Sun
- Department of Mathematics, University of Michigan, Ann Arbor, MI, USA
| | - Fabian P Kliem
- Institute of Medical Psychology and Biomedical Center (BMC), Faculty of Medicine, LMU Munich, Germany
| | - Simon Sennhauser
- Institute of Pharmacology and Toxicology, University of Zurich, Zurich, Switzerland
| | - Sara Pierre-Ferrer
- Institute of Pharmacology and Toxicology, University of Zurich, Zurich, Switzerland; Neuroscience Center Zurich (ZNZ), University of Zurich, Zurich, Switzerland
| | - Alex Rosi-Andersen
- Institute of Pharmacology and Toxicology, University of Zurich, Zurich, Switzerland; Neuroscience Center Zurich (ZNZ), University of Zurich, Zurich, Switzerland
| | - Ida Boccalaro
- Zentrum für Experimentelle Neurologie, Department of Neurology, Inselspital University Hospital Bern, Bern, Switzerland
| | - Philipp Bethge
- Neuroscience Center Zurich (ZNZ), University of Zurich, Zurich, Switzerland; Brain Research Institute, University of Zurich, Zurich, Switzerland
| | - Won Do Heo
- Department of Biological Science, Korea Advanced Institute of Science and Technology (KAIST), Daejeon 305-701, Republic of Korea
| | - Fritjof Helmchen
- Neuroscience Center Zurich (ZNZ), University of Zurich, Zurich, Switzerland; Brain Research Institute, University of Zurich, Zurich, Switzerland; University Research Priority Program (URPP), Adaptive Brain Circuits in Development and Learning, University of Zurich, Zurich, Switzerland
| | - Antoine R Adamantidis
- Zentrum für Experimentelle Neurologie, Department of Neurology, Inselspital University Hospital Bern, Bern, Switzerland.
| | - Daniel B Forger
- Department of Mathematics, University of Michigan, Ann Arbor, MI, USA; Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, USA.
| | - Maria S Robles
- Institute of Medical Psychology and Biomedical Center (BMC), Faculty of Medicine, LMU Munich, Germany.
| | - Steven A Brown
- Institute of Pharmacology and Toxicology, University of Zurich, Zurich, Switzerland
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3
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Huang X, Dong G, Fan H, Zhou W, Huang G, Guan D, Zhang D, Wei F. The genome of African manatee Trichechus senegalensis reveals secondary adaptation to the aquatic environment. iScience 2024; 27:110394. [PMID: 39092175 PMCID: PMC11292518 DOI: 10.1016/j.isci.2024.110394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2024] [Revised: 05/26/2024] [Accepted: 06/25/2024] [Indexed: 08/04/2024] Open
Abstract
Sirenians exhibit unique aquatic adaptations, showcasing both convergent adaptive features shared with cetaceans and unique characteristics such as cold sensitivity and dense bones. Here, we report a chromosome-level genome of the African manatee (Trichechus senegalensis) with high continuity, completeness, and accuracy. We found that genes associated with osteopetrosis have undergone positive selection (CSF1R and LRRK1) or pseudogenized (FAM111A and IGSF23) in the African manatee, potentially contributing to the dense bone formation. The loss of KCNK18 may have increased their sensitivity to cold water temperatures. Moreover, we identified convergent evolutionary signatures in 392 genes among fully aquatic mammals, primarily enriched in skin or skeletal system development and circadian rhythm, which contributed to the transition from terrestrial to fully aquatic lifestyles. The African manatee currently possesses a small effective population size and low genome-wide heterozygosity. Overall, our study provides genetic resources for understanding the evolutionary characteristics and conservation efforts of this species.
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Affiliation(s)
- Xin Huang
- Center for Evolution and Conservation Biology, Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou 511458, China
- CAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Guixin Dong
- Guangdong Chimelong Group, Co., Ltd., Guangzhou 511400, China
| | - Huizhong Fan
- CAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
| | - Wenliang Zhou
- Center for Evolution and Conservation Biology, Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou 511458, China
| | - Guangping Huang
- CAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
- Jiangxi Provincial Key Laboratory of Conservation Biology, College of Forestry, Jiangxi Agricultural University, Nanchang 330045, China
| | - Dengfeng Guan
- CAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
| | - Delu Zhang
- Chimelong Ocean Kingdom, Zhuhai 519000, China
| | - Fuwen Wei
- Center for Evolution and Conservation Biology, Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou 511458, China
- CAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
- University of Chinese Academy of Sciences, Beijing 100049, China
- Jiangxi Provincial Key Laboratory of Conservation Biology, College of Forestry, Jiangxi Agricultural University, Nanchang 330045, China
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4
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Rybalova E, Semenova N. Impact of pulse exposure on chimera state in ensemble of FitzHugh-Nagumo systems. CHAOS (WOODBURY, N.Y.) 2024; 34:071101. [PMID: 38953753 DOI: 10.1063/5.0214787] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2024] [Accepted: 06/17/2024] [Indexed: 07/04/2024]
Abstract
In this article, we consider the influence of a periodic sequence of Gaussian pulses on a chimera state in a ring of coupled FitzHugh-Nagumo systems. We found that on the way to complete spatial synchronization, one can observe a number of variations of chimera states that are not typical for the parameter range under consideration. For example, the following modes were found: breathing chimera, chimera with intermittency in the incoherent part, traveling chimera with strong intermittency, and others. For comparison, here we also consider the impact of a harmonic influence on the same chimera, and to preserve the generality of the conclusions, we compare the regimes caused by both a purely positive harmonic influence and a positive-negative one.
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Affiliation(s)
- E Rybalova
- Radiophysics and Nonlinear Dynamics Department, Institute of Physics, Saratov State University, Astrakhanskaya str. 83, Saratov 410012, Russia
| | - N Semenova
- Radiophysics and Nonlinear Dynamics Department, Institute of Physics, Saratov State University, Astrakhanskaya str. 83, Saratov 410012, Russia
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5
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Frank MG. Molecular clues to the evolution of sleep. Sleep 2024; 47:zsae049. [PMID: 38367018 DOI: 10.1093/sleep/zsae049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2024] [Indexed: 02/19/2024] Open
Affiliation(s)
- Marcos G Frank
- Department of Translational Medicine and Physiology, Elson S. Floyd College of Medicine, Washington State University, Spokane, WA, USA
- Gleason Institute for Neuroscience, Washington State University, Spokane, WA, USA
- Sleep Performance and Research Center, Elson S. Floyd College of Medicine, Washington State University, Spokane, WA, USA
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6
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Yin D, Zhang B, Chong Y, Ren W, Xu S, Yang G. Adaptive changes in BMAL2 with increased locomotion associated with the evolution of unihemispheric slow-wave sleep in mammals. Sleep 2024; 47:zsae018. [PMID: 38289699 PMCID: PMC11009019 DOI: 10.1093/sleep/zsae018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2023] [Revised: 01/11/2024] [Indexed: 02/01/2024] Open
Abstract
Marine mammals, especially cetaceans, have evolved a very special form of sleep characterized by unihemispheric slow-wave sleep (USWS) and a negligible amount or complete absence of rapid-eye-movement sleep; however, the underlying genetic mechanisms remain unclear. Here, we detected unique, significant selection signatures in basic helix-loop-helix ARNT like 2 (BMAL2; also called ARNTL2), a key circadian regulator, in marine mammal lineages, and identified two nonsynonymous amino acid substitutions (K204E and K346Q) in the important PER-ARNT-SIM domain of cetacean BMAL2 via sequence comparison with other mammals. In vitro assays revealed that these cetacean-specific mutations specifically enhanced the response to E-box-like enhancer and consequently promoted the transcriptional activation of PER2, which is closely linked to sleep regulation. The increased PER2 expression, which was further confirmed both in vitro and in vivo, is beneficial for allowing cetaceans to maintain continuous movement and alertness during sleep. Concordantly, the locomotor activities of zebrafish overexpressing the cetacean-specific mutant bmal2 were significantly higher than the zebrafish overexpressing the wild-type gene. Subsequently, transcriptome analyses revealed that cetacean-specific mutations caused the upregulation of arousal-related genes and the downregulation of several sleep-promoting genes, which is consistent with the need to maintain hemispheric arousal during USWS. Our findings suggest a potential close relationship between adaptive changes in BMAL2 and the remarkable adaptation of USWS and may provide novel insights into the genetic basis of the evolution of animal sleep.
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Affiliation(s)
- Daiqing Yin
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, Guangdong 511458, China
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Sciences, Nanjing Normal University, Nanjing 210023, China
| | - Biao Zhang
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Sciences, Nanjing Normal University, Nanjing 210023, China
| | - Yujie Chong
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Sciences, Nanjing Normal University, Nanjing 210023, China
| | - Wenhua Ren
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Sciences, Nanjing Normal University, Nanjing 210023, China
| | - Shixia Xu
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Sciences, Nanjing Normal University, Nanjing 210023, China
| | - Guang Yang
- Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, Guangdong 511458, China
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Sciences, Nanjing Normal University, Nanjing 210023, China
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7
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Zuo Y, Ning N, Qiao GC, Wu JH, Bao JH, Zhang XY, Bai J, Wu FH, Liu Y, Yu Q, Hu SG. Floating-Point Approximation Enabling Cost-Effective and High-Precision Digital Implementation of FitzHugh-Nagumo Neural Networks. IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS 2024; 18:347-360. [PMID: 37878421 DOI: 10.1109/tbcas.2023.3327496] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/27/2023]
Abstract
The study of neuron interactions and hardware implementations are crucial research directions in neuroscience, particularly in developing large-scale biological neural networks. The FitzHugh-Nagumo (FHN) model is a popular neuron model with highly biological plausibility, but its complexity makes it difficult to apply at scale. This paper presents a cost-saving and improved precision approximation algorithm for the digital implementation of the FHN model. By converting the computational data into floating-point numbers, the original multiplication calculations are replaced by adding the floating-point exponent part and fitting the mantissa part with piecewise linear. In the hardware implementation, shifters and adders are used, greatly reducing resource overhead. Implementing FHN neurons by this approximation calculations on FPGA reduces the normalized root mean square error (RMSE) to 3.5% of the state-of-the-art (SOTA) while maintaining a performance overhead ratio improvement of 1.09 times. Compared to implementations based on approximate multipliers, the proposed method achieves a 20% reduction in error at the cost of a 2.8% increase in overhead.This model gained additional biological properties compared to LIF while reducing the deployment scale by only 9%. Furthermore, the hardware implementation of nine coupled circular networks with eight nodes and directional diffusion was carried out to demonstrate the algorithm's effectiveness on neural networks. The error decreased to 60% compared to the single neuron of the SOTA. This hardware-friendly algorithm allows for the low-cost implementation of high-precision hardware simulation, providing a novel perspective for studying large-scale, biologically plausible neural networks.
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8
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Rybalova E, Nikishina N, Strelkova G. Controlling spatiotemporal dynamics of neural networks by Lévy noise. CHAOS (WOODBURY, N.Y.) 2024; 34:041103. [PMID: 38648383 DOI: 10.1063/5.0206094] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Accepted: 04/04/2024] [Indexed: 04/25/2024]
Abstract
We explore numerically how additive Lévy noise influences the spatiotemporal dynamics of a neural network of nonlocally coupled FitzHugh-Nagumo oscillators. Without noise, the network can exhibit various partial or cluster synchronization patterns, such as chimera and solitary states, which can also coexist in the network for certain values of the control parameters. Our studies show that these structures demonstrate different responses to additive Lévy noise and, thus, the dynamics of the neural network can be effectively controlled by varying the scale parameter and the stability index of Lévy noise. Specifically, introducing Lévy noise in the multistability mode can increase the probability of observing chimera states while suppressing solitary states. Nonetheless, decreasing the stability parameter enables one to diminish the noise effect on chimera states and amplify it on solitary states.
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Affiliation(s)
- E Rybalova
- Institute of Physics, Radiophysics and Nonlinear Dynamics Departament, Saratov State University, 83 Astrakhanskaya Street, Saratov 410012, Russia
| | - N Nikishina
- Institute of Physics, Radiophysics and Nonlinear Dynamics Departament, Saratov State University, 83 Astrakhanskaya Street, Saratov 410012, Russia
| | - G Strelkova
- Institute of Physics, Radiophysics and Nonlinear Dynamics Departament, Saratov State University, 83 Astrakhanskaya Street, Saratov 410012, Russia
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9
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Muolo R, Njougouo T, Gambuzza LV, Carletti T, Frasca M. Phase chimera states on nonlocal hyperrings. Phys Rev E 2024; 109:L022201. [PMID: 38491593 DOI: 10.1103/physreve.109.l022201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Accepted: 01/08/2024] [Indexed: 03/18/2024]
Abstract
Chimera states are dynamical states where regions of synchronous trajectories coexist with incoherent ones. A significant amount of research has been devoted to studying chimera states in systems of identical oscillators, nonlocally coupled through pairwise interactions. Nevertheless, there is increasing evidence, also supported by available data, that complex systems are composed of multiple units experiencing many-body interactions that can be modeled by using higher-order structures beyond the paradigm of classic pairwise networks. In this work we investigate whether phase chimera states appear in this framework, by focusing on a topology solely involving many-body, nonlocal, and nonregular interactions, hereby named nonlocal d-hyperring, (d+1) being the order of the interactions. We present the theory by using the paradigmatic Stuart-Landau oscillators as node dynamics, and we show that phase chimera states emerge in a variety of structures and with different coupling functions. For comparison, we show that, when higher-order interactions are "flattened" to pairwise ones, the chimera behavior is weaker and more elusive.
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Affiliation(s)
- Riccardo Muolo
- Department of Systems and Control Engineering, Tokyo Institute of Technology, Tokyo 152-8552, Japan
- Department of Mathematics, University of Namur, B5000 Namur, Belgium
- naXys, Namur Institute for Complex Systems, University of Namur, B5000 Namur, Belgium
| | - Thierry Njougouo
- naXys, Namur Institute for Complex Systems, University of Namur, B5000 Namur, Belgium
- Faculty of Computer Science, University of Namur, B5000 Namur, Belgium
- Department of Electrical and Electronic Engineering, University of Buea, P.O. Box 63, Buea, Cameroon
| | - Lucia Valentina Gambuzza
- Department of Electrical, Electronics and Computer Science Engineering, University of Catania, 95125 Catania, Italy
| | - Timoteo Carletti
- Department of Mathematics, University of Namur, B5000 Namur, Belgium
- naXys, Namur Institute for Complex Systems, University of Namur, B5000 Namur, Belgium
| | - Mattia Frasca
- Department of Electrical, Electronics and Computer Science Engineering, University of Catania, 95125 Catania, Italy
- Istituto di Analisi dei Sistemi ed Informatica "A. Ruberti", IASI-CNR, 00185 Roma, Italy
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10
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Kar R, Yadav A, Chandrasekar VK, Senthilkumar DV. Effect of higher-order interactions on chimera states in two populations of Kuramoto oscillators. CHAOS (WOODBURY, N.Y.) 2024; 34:023110. [PMID: 38363957 DOI: 10.1063/5.0181279] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2023] [Accepted: 01/23/2024] [Indexed: 02/18/2024]
Abstract
We investigate the effect of the fraction of pairwise and higher-order interactions on the emergent dynamics of the two populations of globally coupled Kuramoto oscillators with phase-lag parameters. We find that the stable chimera exists between saddle-node and Hopf bifurcations, while the breathing chimera lives between Hopf and homoclinic bifurcations in the two-parameter phase diagrams. The higher-order interaction facilitates the onset of the bifurcation transitions at a much lower disparity between the inter- and intra-population coupling strengths. Furthermore, the higher-order interaction facilitates the spread of breathing chimera in a large region of the parameter space while suppressing the spread of the stable chimera. A low degree of heterogeneity among the phase-lag parameters promotes the spread of both stable chimera and breathing chimera to a large region of the parameter space for a large fraction of the higher-order coupling. In contrast, a large degree of heterogeneity is found to decrease the spread of both chimera states for a large fraction of the higher-order coupling. A global synchronized state is observed above a critical value of heterogeneity among the phase-lag parameters. We have deduced the low-dimensional evolution equations for the macroscopic order parameters using the Ott-Antonsen Ansatz. We have also deduced the analytical saddle-node and Hopf bifurcation curves from the evolution equations for the macroscopic order parameters and found them to match with the bifurcation curves obtained using the software XPPAUT and with the simulation results.
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Affiliation(s)
- Rumi Kar
- School of Physics, Indian Institute of Science Education and Research, Thiruvananthapuram 695551, Kerala, India
| | - Akash Yadav
- School of Physics, Indian Institute of Science Education and Research, Thiruvananthapuram 695551, Kerala, India
| | - V K Chandrasekar
- Centre for Nonlinear Science & Engineering, School of Electrical & Electronics Engineering, SASTRA Deemed University, Thanjavur 613 401, Tamil Nadu, India
| | - D V Senthilkumar
- School of Physics, Indian Institute of Science Education and Research, Thiruvananthapuram 695551, Kerala, India
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11
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Li Y, Li H, Chen Y, Gao S, Dai Q, Yang J. Spiral wave chimeras in nonlocally coupled bicomponent oscillators. Phys Rev E 2023; 108:064206. [PMID: 38243460 DOI: 10.1103/physreve.108.064206] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Accepted: 11/22/2023] [Indexed: 01/21/2024]
Abstract
Chimera states in nonidentical oscillators have received extensive attention in recent years. Previous studies have demonstrated that chimera states can exist in a ring of nonlocally coupled bicomponent oscillators even in the presence of strong parameter heterogeneity. In this study, we investigate spiral wave chimeras in two-dimensional nonlocally coupled bicomponent oscillators where oscillators are randomly divided into two groups, with identical oscillators in the same group. Using phase oscillators and FitzHugh-Nagumo oscillators as examples, we numerically demonstrate that each group of oscillators supports its own spiral wave chimera and two spiral wave chimeras coexist with each other. We find that there exist three heterogeneity regimes: the synchronous regime at weak heterogeneity, the asynchronous regime at strong heterogeneity, and the transition regime in between. In the synchronous regime, spiral wave chimeras supported by different groups are synchronized with each other by sharing a same rotating frequency and a same incoherent core. In the asynchronous regime, the two spiral wave chimeras rotate at different frequencies and their incoherent cores are far away from each other. These phenomena are also observed in a nonrandom distribution of the two group oscillators and the continuum limit of infinitely many phase oscillators. The transition from synchronous to asynchronous spiral wave chimeras depends on the component oscillators. Specifically, it is a discontinuous transition for phase oscillators but a continuous one for FitzHugh-Nagumo oscillators. We also find that, in the asynchronous regime, increasing heterogeneity leads irregularly meandering spiral wave chimeras to rigidly rotating ones.
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Affiliation(s)
- Yang Li
- School of Science, Beijing University of Posts and Telecommunications, Beijing 100876, People's Republic of China
| | - Haihong Li
- School of Science, Beijing University of Posts and Telecommunications, Beijing 100876, People's Republic of China
| | - Yirui Chen
- School of Science, Beijing University of Posts and Telecommunications, Beijing 100876, People's Republic of China
| | - Shun Gao
- School of Science, Beijing University of Posts and Telecommunications, Beijing 100876, People's Republic of China
| | - Qionglin Dai
- School of Science, Beijing University of Posts and Telecommunications, Beijing 100876, People's Republic of China
| | - Junzhong Yang
- School of Science, Beijing University of Posts and Telecommunications, Beijing 100876, People's Republic of China
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12
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Elmaleh M, Yang Z, Ackert-Smith LA, Long MA. Uncoordinated sleep replay across hemispheres in the zebra finch. Curr Biol 2023; 33:4704-4712.e3. [PMID: 37757833 PMCID: PMC10842454 DOI: 10.1016/j.cub.2023.09.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2023] [Revised: 06/28/2023] [Accepted: 09/01/2023] [Indexed: 09/29/2023]
Abstract
Bilaterally organized brain regions are often simultaneously active in both humans1,2,3 and animal models,4,5,6,7,8,9 but the extent to which the temporal progression of internally generated dynamics is coordinated across hemispheres and how this coordination changes with brain state remain poorly understood. To address these issues, we investigated the zebra finch courtship song (duration: 0.5-1.0 s), a highly stereotyped complex behavior10,11 produced by a set of bilaterally organized nuclei.12,13,14 Unilateral lesions to these structures can eliminate or degrade singing,13,15,16,17 indicating that both hemispheres are required for song production.18 Additionally, previous work demonstrated broadly coherent and symmetric bilateral premotor signals during song.9 To precisely track the temporal evolution of activity in each hemisphere, we recorded bilaterally in the song production pathway. We targeted the robust nucleus of the arcopallium (RA) in the zebra finch, where population activity reflects the moment-to-moment progression of the courtship song during awake vocalizations19,20,21,22,23,24 and sleep, where song-related network dynamics reemerge in "replay" events.24,25 We found that activity in the left and right RA is synchronized within a fraction of a millisecond throughout song. In stark contrast, the two hemispheres displayed largely independent replay activity during sleep, despite shared interhemispheric arousal levels. These findings demonstrate that the degree of bilateral coordination in the zebra finch song system is dynamically modulated by behavioral state.
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Affiliation(s)
- Margot Elmaleh
- NYU Neuroscience Institute and Department of Otolaryngology, New York University Langone Medical Center, New York, NY 10016, USA; Center for Neural Science, New York University, New York, NY 10003, USA
| | - Zetian Yang
- NYU Neuroscience Institute and Department of Otolaryngology, New York University Langone Medical Center, New York, NY 10016, USA; Center for Neural Science, New York University, New York, NY 10003, USA
| | - Lyn A Ackert-Smith
- NYU Neuroscience Institute and Department of Otolaryngology, New York University Langone Medical Center, New York, NY 10016, USA; Center for Neural Science, New York University, New York, NY 10003, USA
| | - Michael A Long
- NYU Neuroscience Institute and Department of Otolaryngology, New York University Langone Medical Center, New York, NY 10016, USA; Center for Neural Science, New York University, New York, NY 10003, USA.
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13
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Venegas-Pineda LG, Jardón-Kojakhmetov H, Cao M. Stable chimera states: A geometric singular perturbation approach. CHAOS (WOODBURY, N.Y.) 2023; 33:113123. [PMID: 37972302 DOI: 10.1063/5.0142122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2023] [Accepted: 10/23/2023] [Indexed: 11/19/2023]
Abstract
Over the past decades, chimera states have attracted considerable attention given their unexpected symmetry-breaking spatiotemporal nature and simultaneously exhibiting synchronous and incoherent behaviors under specific conditions. Despite relevant precursory results of such unforeseen states for diverse physical and topological configurations, there remain structures and mechanisms yet to be unveiled. In this work, using mean-field techniques, we analyze a multilayer network composed of two populations of heterogeneous Kuramoto phase oscillators with coevolutive coupling strengths. Moreover, we employ the geometric singular perturbation theory through the inclusion of a time-scale separation between the dynamics of the network elements and the adaptive coupling strength connecting them, gaining a better insight into the behavior of the system from a fast-slow dynamics perspective. Consequently, we derive the necessary and sufficient condition to produce stable chimera states when considering a coevolutionary intercoupling strength. Additionally, under the aforementioned constraint and with a suitable adaptive law election, it is possible to generate intriguing patterns, such as persistent breathing chimera states. Thereafter, we analyze the geometric properties of the mean-field system with a coevolutionary intracoupling strength and demonstrate the production of stable chimera states. Next, we give arguments for the presence of such patterns in the associated network under specific conditions. Finally, relaxation oscillations and canard cycles, seemingly related to breathing chimeras, are numerically produced under identified conditions due to the geometry of our system.
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Affiliation(s)
- Luis Guillermo Venegas-Pineda
- Bernoulli Institute for Mathematics, Computer Science and Artificial Intelligence, University of Groningen, Nijenborgh 9, 9700 AK Groningen, The Netherlands
| | - Hildeberto Jardón-Kojakhmetov
- Bernoulli Institute for Mathematics, Computer Science and Artificial Intelligence, University of Groningen, Nijenborgh 9, 9700 AK Groningen, The Netherlands
| | - Ming Cao
- Engineering and Technology Institute Groningen, University of Groningen, Nijenborgh 4, 9700 AE Groningen, The Netherlands
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14
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Putyora E, Brocklehurst S, Sandilands V. The Effects of Commercially-Relevant Disturbances on Sleep Behaviour in Laying Hens. Animals (Basel) 2023; 13:3105. [PMID: 37835711 PMCID: PMC10571886 DOI: 10.3390/ani13193105] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Revised: 09/11/2023] [Accepted: 09/21/2023] [Indexed: 10/15/2023] Open
Abstract
Ensuring the welfare of commercially kept animals is a legal and ethical responsibility. Sleep behaviour can be sensitive to environmental perturbations and may be useful in assessing welfare state. The objective of this study was to use behavioural and electrophysiological (EEG) measures to observe the effects of 24 h stressors followed by periods of no stressors on laying hen sleep behaviour, and to investigate the use of sleep behaviour as a means of welfare assessment in commercial poultry. Ten laying hens surgically implanted with EEG devices to record their brain activity over four batches were used. Hens were subjected to undisturbed, disturbed and recovery periods for 24 h. Disturbed periods consisted of either feed deprivation, increased ambient temperature (28 °C) or simulated footpad pain via injection of Freund's adjuvant into the footpad. Sleep state was scored using behaviour data from infrared cameras and EEG data. Over all periods, hens engaged in both SWS (average 60%) and REM sleep (average 12%) during the lights-off period. Feed deprivation and footpad pain had little to no effect on sleep states, while increased ambient temperature significantly reduced REM sleep (to near elimination, p < 0.001) and SWS (p = 0.017). During the lights-on period, footpad pain increased the proportion of time spent resting (p = 0.008) and in SWS (p < 0.001), with feed deprivation or increased ambient temperature (p > 0.05) having no effect. Increasing ambient temperatures are likely to affect sleep and welfare in commercially-kept laying hens in the face of global climate change.
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Affiliation(s)
- Endre Putyora
- Department of Veterinary and Biosciences, Faculty of Veterinary Medicine, Ghent University, 9820 Merelbeke, Belgium
- Department of Agriculture, Horticulture and Engineering Sciences, Scotland’s Rural College (SRUC), Edinburgh EH25 9RG, UK;
| | | | - Victoria Sandilands
- Department of Agriculture, Horticulture and Engineering Sciences, Scotland’s Rural College (SRUC), Edinburgh EH25 9RG, UK;
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15
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Feng P, Yang J, Wu Y. Chimera state in a feed-forward neuronal network. Cogn Neurodyn 2023; 17:1119-1130. [PMID: 37790707 PMCID: PMC10542440 DOI: 10.1007/s11571-022-09928-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2022] [Revised: 06/10/2022] [Accepted: 06/13/2022] [Indexed: 01/11/2023] Open
Abstract
Feed-forward effect gives rise to synchronization in neuron firing in deep layers of multiple neuronal network. But complete synchronization means the loss of encoding ability. In order to avoid the contradiction, we ask whether partial synchronization (coexistence of disordered and synchronized neuron firing emerges, also called chimera state) as a compromise strategy can achieve in the feed-forward multiple-layer network. The answer is YES. In order to manifest our argument, we design a multi-layer neuronal network in which neurons in every layer are arranged in a ring topology and neuron firing propagates within (intra-) and across (inter-) the multiply layers. Emergence of chimera state and other patterns highly depends on initial condition of neuronal network and strength of feed-forward effect. Chimera state, cluster and synchronization intra- and inter- layers are displayed by sequence through layers when initial values are elaborately chosen to guarantee emergence of chimera state in the first layer. All type of patterns except chimera state propagates down toward deeper layers in different speeds varying with strength of feed-forward effect. If chimera state already exists in every layer, feed-forward effect with strong and moderate strength spoils chimera states in deep layers and they can only survive in first few layers. When the effect is small enough, chimera states will propagate down toward deeper layers. Indeed, chimera states could exist and transit to deeper layers in a regular multiple network under very strict conditions. The results help understanding better the neuron firing propagating and encoding scheme in a feed-forward neuron network.
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Affiliation(s)
- Peihua Feng
- State Key Laboratory for Strength and Vibration of Mechanical Structures, School of Aerospace Engineering, Xi’an Jiaotong University, Xi’an, 710049 People’s Republic of China
| | - Jiayi Yang
- State Key Laboratory for Strength and Vibration of Mechanical Structures, School of Aerospace Engineering, Xi’an Jiaotong University, Xi’an, 710049 People’s Republic of China
| | - Ying Wu
- State Key Laboratory for Strength and Vibration of Mechanical Structures, School of Aerospace Engineering, Xi’an Jiaotong University, Xi’an, 710049 People’s Republic of China
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16
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Andrillon T. How we sleep: From brain states to processes. Rev Neurol (Paris) 2023; 179:649-657. [PMID: 37625978 DOI: 10.1016/j.neurol.2023.08.007] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Accepted: 08/03/2023] [Indexed: 08/27/2023]
Abstract
All our lives, we alternate between wakefulness and sleep with direct consequences on our ability to interact with our environment, the dynamics and contents of our subjective experience, and our brain activity. Consequently, sleep has been extensively characterised in terms of behavioural, phenomenological, and physiological changes, the latter constituting the gold standard of sleep research. The common view is thus that sleep represents a collection of discrete states with distinct neurophysiological signatures. However, recent findings challenge such a monolithic view of sleep. Indeed, there can be sharp discrepancies in time and space in the activity displayed by different brain regions or networks, making it difficult to assign a global vigilance state to such a mosaic of contrasted dynamics. Viewing sleep as a multidimensional continuum rather than a succession of non-overlapping and mutually exclusive states could account for these local aspects of sleep. Moving away from the focus on sleep states, sleep can also be investigated through the brain processes that are present in sleep, if not necessarily specific to sleep. This focus on processes rather than states allows to see sleep for what it does rather than what it is, avoiding some of the limitations of the state perspective and providing a powerful heuristic to understand sleep. Indeed, what is sleep if not a process itself that makes up wake up every morning with a brain cleaner, leaner and less cluttered.
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Affiliation(s)
- T Andrillon
- Paris Brain Institute, Sorbonne Université, Inserm, CNRS, 75013 Paris, France; Monash Centre for Consciousness & Contemplative Studies, Monash University, Melbourne, VIC 3800, Australia.
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17
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Ocampo-Espindola JL, Nikhil KL, Li JS, Herzog ED, Kiss IZ. Synchronization, clustering, and weak chimeras in a densely coupled transcription-based oscillator model for split circadian rhythms. CHAOS (WOODBURY, N.Y.) 2023; 33:083105. [PMID: 37535024 PMCID: PMC10403273 DOI: 10.1063/5.0156135] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Accepted: 07/08/2023] [Indexed: 08/04/2023]
Abstract
The synchronization dynamics for the circadian gene expression in the suprachiasmatic nucleus is investigated using a transcriptional circadian clock gene oscillator model. With global coupling in constant dark (DD) conditions, the model exhibits a one-cluster phase synchronized state, in dim light (dim LL), bistability between one- and two-cluster states and in bright LL, a two-cluster state. The two-cluster phase synchronized state, where some oscillator pairs synchronize in-phase, and some anti-phase, can explain the splitting of the circadian clock, i.e., generation of two bouts of daily activities with certain species, e.g., with hamsters. The one- and two-cluster states can be reached by transferring the animal from DD or bright LL to dim LL, i.e., the circadian synchrony has a memory effect. The stability of the one- and two-cluster states was interpreted analytically by extracting phase models from the ordinary differential equation models. In a modular network with two strongly coupled oscillator populations with weak intragroup coupling, with appropriate initial conditions, one group is synchronized to the one-cluster state and the other group to the two-cluster state, resulting in a weak-chimera state. Computational modeling suggests that the daily rhythms in sleep-wake depend on light intensity acting on bilateral networks of suprachiasmatic nucleus (SCN) oscillators. Addition of a network heterogeneity (coupling between the left and right SCN) allowed the system to exhibit chimera states. The simulations can guide experiments in the circadian rhythm research to explore the effect of light intensity on the complexities of circadian desynchronization.
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Affiliation(s)
| | - K. L. Nikhil
- Department of Biology, Washington University in St. Louis, One Brookings Drive, St. Louis, Missouri 63130-4899, USA
| | - Jr-Shin Li
- Department of Electrical and Systems Engineering, Washington University in St Louis, 1 Brookings Drive, St. Louis, Missouri 63130, USA
| | - Erik D. Herzog
- Department of Biology, Washington University in St. Louis, One Brookings Drive, St. Louis, Missouri 63130-4899, USA
| | - István Z. Kiss
- Department of Chemistry, Saint Louis University, 3501 Laclede Ave., St. Louis, Missouri 63103, USA
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18
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Gu S, Fang Q, Zhou P, Li N. Chimera states in a large laterally coupled laser array with four different waveguide structures. CHAOS (WOODBURY, N.Y.) 2023; 33:073152. [PMID: 37499249 DOI: 10.1063/5.0151330] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2023] [Accepted: 07/03/2023] [Indexed: 07/29/2023]
Abstract
Chimera states are rich and fascinating phenomena existing in many networks, where the identical oscillators self-organize into spatially separated coexisting domains of coherent and incoherent oscillations. Here, we report these states in the large laterally coupled laser array with four different waveguiding structures, with which a variety of chimera patterns can be revealed. We present the bifurcation diagrams giving birth to them and find that the chimeras exist in the boundary of the steady state and multi-period oscillation solutions, which applies to all the prevalent waveguiding structures considered. We also find that the waveguiding structures play an important role in the chimera states, e.g., the array composed of the index antiguiding with gain-guiding has a wider chimera region compared to other waveguides considered. Additionally, the effects of the crucial parameters including the laser separation ratio, pump rate, frequency detuning, and linewidth enhancement factor on the observed phenomena are discussed. Our analysis shows that the frequency detuning between lasers and the linewidth enhancement factor affects the lifetime and pattern of chimeras. The results could guide the design of laser arrays or introduce more insight into a new understanding of the dynamical behaviors of networks.
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Affiliation(s)
- Shuangquan Gu
- School of Optoelectronic Science and Engineering and Collaborative Innovation Center of Suzhou Nano Science and Technology, Soochow University, Suzhou 215006, China
- Key Lab of Advanced Optical Manufacturing Technologies of Jiangsu Province and Key Lab of Modern Optical Technologies of Education Ministry of China, Soochow University, Suzhou 215006, China
| | - Qi Fang
- School of Optoelectronic Science and Engineering and Collaborative Innovation Center of Suzhou Nano Science and Technology, Soochow University, Suzhou 215006, China
- Key Lab of Advanced Optical Manufacturing Technologies of Jiangsu Province and Key Lab of Modern Optical Technologies of Education Ministry of China, Soochow University, Suzhou 215006, China
| | - Pei Zhou
- School of Optoelectronic Science and Engineering and Collaborative Innovation Center of Suzhou Nano Science and Technology, Soochow University, Suzhou 215006, China
- Key Lab of Advanced Optical Manufacturing Technologies of Jiangsu Province and Key Lab of Modern Optical Technologies of Education Ministry of China, Soochow University, Suzhou 215006, China
| | - Nianqiang Li
- School of Optoelectronic Science and Engineering and Collaborative Innovation Center of Suzhou Nano Science and Technology, Soochow University, Suzhou 215006, China
- Key Lab of Advanced Optical Manufacturing Technologies of Jiangsu Province and Key Lab of Modern Optical Technologies of Education Ministry of China, Soochow University, Suzhou 215006, China
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19
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Chen D, Yang Z, Xiao Q, Liu Z. Sensitive dynamics of brain cognitive networks and its resource constraints. CHAOS (WOODBURY, N.Y.) 2023; 33:063139. [PMID: 37318341 DOI: 10.1063/5.0145734] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/07/2023] [Accepted: 05/24/2023] [Indexed: 06/16/2023]
Abstract
It is well known that brain functions are closely related to the synchronization of brain networks, but the underlying mechanisms are still not completely understood. To study this problem, we here focus on the synchronization of cognitive networks, in contrast to that of a global brain network, as individual brain functions are in fact performed by different cognitive networks but not the global network. In detail, we consider four different levels of brain networks and two approaches, i.e., either with or without resource constraints. For the case of without resource constraints, we find that global brain networks have fundamentally different behaviors from that of the cognitive networks; i.e., the former has a continuous synchronization transition, while the latter shows a novel transition of oscillatory synchronization. This feature of oscillation comes from the sparse links among the communities of cognitive networks, resulting in coupling sensitive dynamics of brain cognitive networks. While for the case of resource constraints, we find that at the global level, the synchronization transition becomes explosive, in contrast to the continuous synchronization for the case of without resource constraints. At the level of cognitive networks, the transition also becomes explosive and the coupling sensitivity is significantly reduced, thus guaranteeing the robustness and fast switch of brain functions. Moreover, a brief theoretical analysis is provided.
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Affiliation(s)
- Dehua Chen
- School of Physics and Electronic Science, East China Normal University, Shanghai 200241, People's Republic of China
| | - Zhiyin Yang
- School of Physics and Electronic Science, East China Normal University, Shanghai 200241, People's Republic of China
| | - Qin Xiao
- School of Physics and Electronic Science, East China Normal University, Shanghai 200241, People's Republic of China
- College of Science, Shanghai Institute of Technology, Shanghai 201418, People's Republic of China
| | - Zonghua Liu
- School of Physics and Electronic Science, East China Normal University, Shanghai 200241, People's Republic of China
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20
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Mbouna SGN, Banerjee T, Schöll E. Chimera patterns with spatial random swings between periodic attractors in a network of FitzHugh-Nagumo oscillators. Phys Rev E 2023; 107:054204. [PMID: 37329071 DOI: 10.1103/physreve.107.054204] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2022] [Accepted: 04/21/2023] [Indexed: 06/18/2023]
Abstract
For the study of symmetry-breaking phenomena in neuronal networks, simplified versions of the FitzHugh-Nagumo model are widely used. In this paper, these phenomena are investigated in a network of FitzHugh-Nagumo oscillators taken in the form of the original model and it is found that it exhibits diverse partial synchronization patterns that are unobserved in the networks with simplified models. Apart from the classical chimera, we report a new type of chimera pattern whose incoherent clusters are characterized by spatial random swings among a few fixed periodic attractors. Another peculiar hybrid state is found that combines the features of this chimera state and a solitary state such that the main coherent cluster is interspersed with some nodes with identical solitary dynamics. In addition, oscillation death including chimera death emerges in this network. A reduced model of the network is derived to study oscillation death, which helps explaining the transition from spatial chaos to oscillation death via the chimera state with a solitary state. This study deepens our understanding of chimera patterns in neuronal networks.
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Affiliation(s)
- S G Ngueuteu Mbouna
- Laboratory of Modeling and Simulation in Engineering, Biomimetics and Prototypes, Faculty of Science, University of Yaoundé I, P. O. Box 812, Yaoundé, Cameroon
| | - Tanmoy Banerjee
- Chaos and Complex Systems Research Laboratory, Department of Physics, University of Burdwan, Burdwan 713 104, India
| | - Eckehard Schöll
- Institut für Theoretische Physik, Technische Universität Berlin, 10623 Berlin, Germany; Potsdam Institute for Climate Impact Research, 14473 Potsdam, Germany; and Bernstein Center for Computational Neuroscience Berlin, Humboldt-Universität, 10115 Berlin, Germany
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21
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Kendall-Bar JM, Williams TM, Mukherji R, Lozano DA, Pitman JK, Holser RR, Keates T, Beltran RS, Robinson PW, Crocker DE, Adachi T, Lyamin OI, Vyssotski AL, Costa DP. Brain activity of diving seals reveals short sleep cycles at depth. Science 2023; 380:260-265. [PMID: 37079694 DOI: 10.1126/science.adf0566] [Citation(s) in RCA: 13] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/22/2023]
Abstract
Sleep is a crucial part of the daily activity patterns of mammals. However, in marine species that spend months or entire lifetimes at sea, the location, timing, and duration of sleep may be constrained. To understand how marine mammals satisfy their daily sleep requirements while at sea, we monitored electroencephalographic activity in wild northern elephant seals (Mirounga angustirostris) diving in Monterey Bay, California. Brain-wave patterns showed that seals took short (less than 20 minutes) naps while diving (maximum depth 377 meters; 104 sleeping dives). Linking these patterns to accelerometry and the time-depth profiles of 334 free-ranging seals (514,406 sleeping dives) revealed a North Pacific sleepscape in which seals averaged only 2 hours of sleep per day for 7 months, rivaling the record for the least sleep among all mammals, which is currently held by the African elephant (about 2 hours per day).
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Affiliation(s)
- Jessica M Kendall-Bar
- Scripps Institution of Oceanography, University of California San Diego, San Diego, CA, USA
- Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA, USA
| | - Terrie M Williams
- Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA, USA
| | - Ritika Mukherji
- Department of Neuroscience, University of Oxford, Oxford, UK
| | - Daniel A Lozano
- Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA, USA
| | | | - Rachel R Holser
- Institute of Marine Sciences, University of California Santa Cruz, Santa Cruz, CA, USA
| | - Theresa Keates
- Ocean Sciences Department, University of California Santa Cruz, Santa Cruz, CA, USA
| | - Roxanne S Beltran
- Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA, USA
| | - Patrick W Robinson
- Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA, USA
| | - Daniel E Crocker
- Department of Biology, Sonoma State University, Rohnert Park, CA, USA
| | - Taiki Adachi
- Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA, USA
| | - Oleg I Lyamin
- Semel Institute for Neuroscience and Human Behavior, University of California Los Angeles, Los Angeles, CA, USA
- A.N. Severtsov Institute of Ecology and Evolution, Moscow, Russia
| | - Alexei L Vyssotski
- Institute of Neuroinformatics, University of Zurich and Swiss Federal Institute of Technology (ETH), Zurich, Switzerland
| | - Daniel P Costa
- Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, CA, USA
- Institute of Marine Sciences, University of California Santa Cruz, Santa Cruz, CA, USA
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22
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Putyora E, Brocklehurst S, Tuyttens F, Sandilands V. The Effects of Mild Disturbances on Sleep Behaviour in Laying Hens. Animals (Basel) 2023; 13:ani13071251. [PMID: 37048507 PMCID: PMC10093027 DOI: 10.3390/ani13071251] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2023] [Revised: 03/26/2023] [Accepted: 03/29/2023] [Indexed: 04/14/2023] Open
Abstract
The positive welfare of commercial animals presents many benefits, making the accurate assessment of welfare important. Assessments frequently use behaviour to determine welfare state; however, nighttime behaviours are often ignored. Sleep behaviour may offer new insights into welfare assessments. This study aimed to establish a baseline for sleep behaviour in laying hens and to then apply mild short-term disturbances and observe the subsequent effects. Twelve laying hens were divided into four batches and were surgically implanted with electroencephalogram (EEG) devices to record their brain activity. The batches were subjected to undisturbed, disturbed and recovery types of nights. Disturbed nights consisted of systematic sequences of disturbance application (wind, 90 dB noise or 20 lux light) applied one at a time for 5 min every 30 min from 21:00 to 03:00 (lights off period: 19:00-05:00). Sleep state was scored using EEG data and behaviour data from infrared cameras. Over all the types of night hens engaged in both SWS (58%) and REM sleep (18%) during lights off. When applied, the disturbances were effective at altering the amounts of wakefulness and SWS (Time × Type of Night, p < 0.001, p = 0.017, respectively), whereas REM sleep was unaltered (p = 0.540). There was no evidence of carry-over effects over the following day or night. Laying hens may be resilient to short-term sleep disruption by compensating for this in the same night, suggesting that these disturbances do not impact their long-term welfare (i.e., over days). Sleep behaviour potentially offers a unique means of assessing an aspect of animal welfare that, to date, has been poorly studied.
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Affiliation(s)
- Endre Putyora
- Department of Veterinary and Biosciences, Faculty of Veterinary Medicine, Ghent University, 9820 Merelbeke, Belgium
- Department of Agriculture, Horticulture and Engineering Sciences, Scotland's Rural College (SRUC), Edinburgh EH25 9RG, UK
| | | | - Frank Tuyttens
- Department of Veterinary and Biosciences, Faculty of Veterinary Medicine, Ghent University, 9820 Merelbeke, Belgium
- Animal Sciences Unit, Flanders Research Institute for Agriculture, Fisheries and Food (ILVO), 9090 Melle, Belgium
| | - Victoria Sandilands
- Department of Agriculture, Horticulture and Engineering Sciences, Scotland's Rural College (SRUC), Edinburgh EH25 9RG, UK
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23
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Fenk LA, Riquelme JL, Laurent G. Interhemispheric competition during sleep. Nature 2023; 616:312-318. [PMID: 36949193 PMCID: PMC10097603 DOI: 10.1038/s41586-023-05827-w] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Accepted: 02/10/2023] [Indexed: 03/24/2023]
Abstract
Our understanding of the functions and mechanisms of sleep remains incomplete, reflecting their increasingly evident complexity1-3. Likewise, studies of interhemispheric coordination during sleep4-6 are often hard to connect precisely to known sleep circuits and mechanisms. Here, by recording from the claustra of sleeping bearded dragons (Pogona vitticeps), we show that, although the onsets and offsets of Pogona rapid-eye-movement (REMP) and slow-wave sleep are coordinated bilaterally, these two sleep states differ markedly in their inter-claustral coordination. During slow-wave sleep, the claustra produce sharp-wave ripples independently of one another, showing no coordination. By contrast, during REMP sleep, the potentials produced by the two claustra are precisely coordinated in amplitude and time. These signals, however, are not synchronous: one side leads the other by about 20 ms, with the leading side switching typically once per REMP episode or in between successive episodes. The leading claustrum expresses the stronger activity, suggesting bilateral competition. This competition does not occur directly between the two claustra or telencephalic hemispheres. Rather, it occurs in the midbrain and depends on the integrity of a GABAergic (γ-aminobutyric-acid-producing) nucleus of the isthmic complex, which exists in all vertebrates and is known in birds to underlie bottom-up attention and gaze control. These results reveal that a winner-take-all-type competition exists between the two sides of the brain of Pogona, which originates in the midbrain and has precise consequences for claustrum activity and coordination during REMP sleep.
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Affiliation(s)
- Lorenz A Fenk
- Max Planck Institute for Brain Research, Frankfurt, Germany.
| | - Juan Luis Riquelme
- Max Planck Institute for Brain Research, Frankfurt, Germany
- School of Life Sciences, Technical University of Munich, Freising, Germany
| | - Gilles Laurent
- Max Planck Institute for Brain Research, Frankfurt, Germany.
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24
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Feng P, Yang J, Wu Y, Liu Z. Alternating chimera states in complex networks with modular structures. CHAOS (WOODBURY, N.Y.) 2023; 33:033136. [PMID: 37003804 DOI: 10.1063/5.0132072] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Accepted: 02/28/2023] [Indexed: 06/19/2023]
Abstract
Chimera, the coexistence state of synchronization and non-synchronization, widely exists in complex networks. It has a great potentially explanatory power for the unihemispheric sleep of birds and some mammals, in which the synchronizations of the hemispheres of the cerebral cortex are evolving alternately. In this study, a coupled nonlinear oscillator system with a topology of the modular complex network was constructed to simulate the left and right hemispheres of the brain. The results showed that a stable chimera, an alternating chimera, and a breathing chimera were produced when the coupling strength and connection probability of the left and right hemispheres were changed. Further, we studied the effect of noise on rich synchronous patterns and found that the alternating chimera was robust to Gaussian white noise when the strength was not very large. Finally, our study was extended to a complex network with three sub-networks, and an alternating chimera could exist in two or three sub-networks. Our research provides a deeper insight into the mechanism of brain function like unihemispheric sleep.
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Affiliation(s)
- Peihua Feng
- State Key Laboratory for Strength and Vibration of Mechanical Structures, School of Aerospace Engineering, Xi'an Jiaotong University, Xi'an 710049, People's Republic of China
| | - Jiayi Yang
- State Key Laboratory for Strength and Vibration of Mechanical Structures, School of Aerospace Engineering, Xi'an Jiaotong University, Xi'an 710049, People's Republic of China
| | - Ying Wu
- State Key Laboratory for Strength and Vibration of Mechanical Structures, School of Aerospace Engineering, Xi'an Jiaotong University, Xi'an 710049, People's Republic of China
| | - Zhilong Liu
- Hefei General Machinery Research Institute, State Key Laboratory of Compressor Technology, Hefei 230031, People's Republic of China
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25
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Provata A. From Turing patterns to chimera states in the 2D Brusselator model. CHAOS (WOODBURY, N.Y.) 2023; 33:033133. [PMID: 37003796 DOI: 10.1063/5.0130539] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2022] [Accepted: 02/23/2023] [Indexed: 06/19/2023]
Abstract
The Brusselator has been used as a prototype model for autocatalytic reactions and, in particular, for the Belousov-Zhabotinsky reaction. When coupled at the diffusive limit, the Brusselator undergoes a Turing bifurcation resulting in the formation of classical Turing patterns, such as spots, stripes, and spirals in two spatial dimensions. In the present study, we use generic nonlocally coupled Brusselators and show that in the limit of the coupling range R→1 (diffusive limit), the classical Turing patterns are recovered, while for intermediate coupling ranges and appropriate parameter values, chimera states are produced. This study demonstrates how the parameters of a typical nonlinear oscillator can be tuned so that the coupled system passes from spatially stable Turing structures to dynamical spatiotemporal chimera states.
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Affiliation(s)
- A Provata
- Institute of Nanoscience and Nanotechnology, National Center for Scientific Research "Demokritos," 15341 Athens, Greece
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Xu F, Zhao J, Liu M, Yu X, Wang C, Lou Y, Shi W, Liu Y, Gao L, Yang Q, Zhang B, Lu S, Tang J, Leng J. Exploration of sleep function connection and classification strategies based on sub-period sleep stages. Front Neurosci 2023; 16:1088116. [PMID: 36760796 PMCID: PMC9906994 DOI: 10.3389/fnins.2022.1088116] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2022] [Accepted: 12/30/2022] [Indexed: 01/26/2023] Open
Abstract
Background As a medium for developing brain-computer interface systems, EEG signals are complex and difficult to identify due to their complexity, weakness, and differences between subjects. At present, most of the current research on sleep EEG signals are single-channel and dual-channel, ignoring the research on the relationship between different brain regions. Brain functional connectivity is considered to be closely related to brain activity and can be used to study the interaction relationship between brain areas. Methods Phase-locked value (PLV) is used to construct a functional connection network. The connection network is used to analyze the connection mechanism and brain interaction in different sleep stages. Firstly, the entire EEG signal is divided into multiple sub-periods. Secondly, Phase-locked value is used for feature extraction on the sub-periods. Thirdly, the PLV of multiple sub-periods is used for feature fusion. Fourthly, the classification performance optimization strategy is used to discuss the impact of different frequency bands on sleep stage classification performance and to find the optimal frequency band. Finally, the brain function network is constructed by using the average value of the fusion features to analyze the interaction of brain regions in different frequency bands during sleep stages. Results The experimental results have shown that when the number of sub-periods is 30, the α (8-13 Hz) frequency band has the best classification effect, The classification result after 10-fold cross-validation reaches 92.59%. Conclusion The proposed algorithm has good sleep staging performance, which can effectively promote the development and application of an EEG sleep staging system.
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Affiliation(s)
- Fangzhou Xu
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China,*Correspondence: Fangzhou Xu,
| | - Jinzhao Zhao
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Ming Liu
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Xin Yu
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Chongfeng Wang
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Yitai Lou
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Weiyou Shi
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Yanbing Liu
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Licai Gao
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Qingbo Yang
- School of Mathematics and Statistics, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China
| | - Baokun Zhang
- Department of Neurology, Shandong Institute of Neuroimmunology, Shandong Key Laboratory of Rheumatic Disease and Translational Medicine, The First Affliated Hospital of Shandong First Medical University, Shandong Provincial Qianfoshan Hospital, Jinan, China
| | - Shanshan Lu
- Department of Neurology, Shandong Institute of Neuroimmunology, Shandong Key Laboratory of Rheumatic Disease and Translational Medicine, The First Affliated Hospital of Shandong First Medical University, Shandong Provincial Qianfoshan Hospital, Jinan, China,Department of Neurology, Cheeloo College of Medicine, Shandong Qianfoshan Hospital, Shandong University, Jinan, Shandong, China,Shanshan Lu,
| | - Jiyou Tang
- Department of Neurology, Shandong Institute of Neuroimmunology, Shandong Key Laboratory of Rheumatic Disease and Translational Medicine, The First Affliated Hospital of Shandong First Medical University, Shandong Provincial Qianfoshan Hospital, Jinan, China,Department of Neurology, Cheeloo College of Medicine, Shandong Qianfoshan Hospital, Shandong University, Jinan, Shandong, China,Jiyou Tang,
| | - Jiancai Leng
- International School for Optoelectronic Engineering, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China,Jiancai Leng,
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Awal NM, Epstein IR, Kaper TJ, Vo T. Symmetry-breaking rhythms in coupled, identical fast-slow oscillators. CHAOS (WOODBURY, N.Y.) 2023; 33:011102. [PMID: 36725648 DOI: 10.1063/5.0131305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2022] [Accepted: 12/12/2022] [Indexed: 06/18/2023]
Abstract
Symmetry-breaking in coupled, identical, fast-slow systems produces a rich, dramatic variety of dynamical behavior-such as amplitudes and frequencies differing by an order of magnitude or more and qualitatively different rhythms between oscillators, corresponding to different functional states. We present a novel method for analyzing these systems. It identifies the key geometric structures responsible for this new symmetry-breaking, and it shows that many different types of symmetry-breaking rhythms arise robustly. We find symmetry-breaking rhythms in which one oscillator exhibits small-amplitude oscillations, while the other exhibits phase-shifted small-amplitude oscillations, large-amplitude oscillations, mixed-mode oscillations, or even undergoes an explosion of limit cycle canards. Two prototypical fast-slow systems illustrate the method: the van der Pol equation that describes electrical circuits and the Lengyel-Epstein model of chemical oscillators.
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Affiliation(s)
- Naziru M Awal
- Department of Chemistry, Brandeis University, Waltham, Massachusetts 02453, USA
| | - Irving R Epstein
- Department of Chemistry, Brandeis University, Waltham, Massachusetts 02453, USA
| | - Tasso J Kaper
- Department of Mathematics and Statistics, Boston University, Boston, Massachusetts 02215, USA
| | - Theodore Vo
- School of Mathematics, Monash University, Clayton, Victoria 3800, Australia
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Temperature-robust rapid eye movement and slow wave sleep in the lizard Laudakia vulgaris. Commun Biol 2022; 5:1310. [PMID: 36446903 PMCID: PMC9709036 DOI: 10.1038/s42003-022-04261-4] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2022] [Accepted: 11/15/2022] [Indexed: 11/30/2022] Open
Abstract
During sleep our brain switches between two starkly different brain states - slow wave sleep (SWS) and rapid eye movement (REM) sleep. While this two-state sleep pattern is abundant across birds and mammals, its existence in other vertebrates is not universally accepted, its evolutionary emergence is unclear and it is undetermined whether it is a fundamental property of vertebrate brains or an adaptation specific to homeotherms. To address these questions, we conducted electrophysiological recordings in the Agamid lizard, Laudakia vulgaris during sleep. We found clear signatures of two-state sleep that resemble the mammalian and avian sleep patterns. These states switched periodically throughout the night with a cycle of ~90 seconds and were remarkably similar to the states previously reported in Pogona vitticeps. Interestingly, in contrast to the high temperature sensitivity of mammalian states, state switches were robust to large variations in temperature. We also found that breathing rate, micro-movements and eye movements were locked to the REM state as they are in mammals. Collectively, these findings suggest that two-state sleep is abundant across the agamid family, shares physiological similarity to mammalian sleep, and can be maintain in poikilothems, increasing the probability that it existed in the cold-blooded ancestor of amniotes.
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Sarfati R, Peleg O. Chimera states among synchronous fireflies. SCIENCE ADVANCES 2022; 8:eadd6690. [PMID: 36383660 PMCID: PMC9668303 DOI: 10.1126/sciadv.add6690] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/26/2022] [Accepted: 09/28/2022] [Indexed: 06/16/2023]
Abstract
Systems of oscillators often converge to a state of synchrony when sufficiently interconnected. Twenty years ago, the mathematical analysis of models of coupled oscillators revealed the possibility for complex phases that exhibit a coexistence of synchronous and asynchronous clusters, known as "chimera states." Beyond their recurrence in theoretical models, chimeras have been observed under specifically designed experimental conditions, yet their emergence in nature has remained elusive. Here, we report evidence for the occurrence of chimeras in a celebrated realization of natural synchrony: fireflies. In video recordings of Photuris frontalis fireflies, we observe, within a single swarm, the spontaneous emergence of different groups flashing with the same periodicity but with a constant delay between them. From the three-dimensional reconstruction of the swarm, we demonstrate that these states are stable over time and spatially intertwined. We discuss the implications of these findings on the synergy between mathematical models and collective behavior.
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Affiliation(s)
- Raphaël Sarfati
- BioFrontiers Institute, University of Colorado Boulder, Boulder, CO, USA
| | - Orit Peleg
- BioFrontiers Institute, University of Colorado Boulder, Boulder, CO, USA
- Department of Computer Science, University of Colorado Boulder, Boulder, CO, USA
- Department of Applied Math, University of Colorado Boulder, Boulder, CO, USA
- Department of Physics, University of Colorado Boulder, Boulder, CO, USA
- Department of Ecology and Evolutionary Biology, University of Colorado Boulder, Boulder, CO, USA
- Santa Fe Institute, Santa Fe, NM, USA
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30
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Woodward SH. Autonomic regulation during sleep in PTSD. Neurobiol Stress 2022; 21:100483. [DOI: 10.1016/j.ynstr.2022.100483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2022] [Revised: 08/01/2022] [Accepted: 08/25/2022] [Indexed: 10/31/2022] Open
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Khatun T, Bandyopadhyay B, Banerjee T. Diverse coherence-resonance chimeras in coupled type-I excitable systems. Phys Rev E 2022; 106:054208. [PMID: 36559485 DOI: 10.1103/physreve.106.054208] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Accepted: 10/27/2022] [Indexed: 06/17/2023]
Abstract
Coherence-resonance chimera was discovered in [Phys. Rev. Lett. 117, 014102 (2016)10.1103/PhysRevLett.117.014102], which combines the effect of coherence-resonance and classical chimeras in the presence of noise in a network of type-II excitable systems. However, the same in a network of type-I excitable units has not been observed yet. In this paper we report the occurrence of coherence-resonance chimera in coupled type-I excitable systems. We consider a paradigmatic model of type-I excitability, namely, the saddle-node infinite period model, and show that the coherence-resonance chimera appears over an optimum range of noise intensity. Moreover, we discover a unique chimera pattern that is a mixture of classical chimera and the coherence-resonance chimera. We support our results using quantitative measures and map them in parameter space. This study reveals that the coherence-resonance chimera is a general chimera pattern and thus it deepens our understanding of role of noise in coupled excitable systems.
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Affiliation(s)
- Taniya Khatun
- Chaos and Complex Systems Research Laboratory, Department of Physics, University of Burdwan, Burdwan 713 104, West Bengal, India
| | - Biswabibek Bandyopadhyay
- Chaos and Complex Systems Research Laboratory, Department of Physics, University of Burdwan, Burdwan 713 104, West Bengal, India
| | - Tanmoy Banerjee
- Chaos and Complex Systems Research Laboratory, Department of Physics, University of Burdwan, Burdwan 713 104, West Bengal, India
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32
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Adaptive Solutions to the Problem of Vulnerability During Sleep. EVOLUTIONARY PSYCHOLOGICAL SCIENCE 2022. [DOI: 10.1007/s40806-022-00330-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
Abstract
AbstractSleep is a behavioral state whose quantity and quality represent a trade-off between the costs and benefits this state provides versus the costs and benefits of wakefulness. Like many species, we humans are particularly vulnerable during sleep because of our reduced ability to monitor the external environment for nighttime predators and other environmental dangers. A number of variations in sleep characteristics may have evolved over the course of human history to reduce this vulnerability, at both the individual and group level. The goals of this interdisciplinary review paper are (1) to explore a number of biological/instinctual features of sleep that may have adaptive utility in terms of enhancing the detection of external threats, and (2) to consider relatively recent cultural developments that improve vigilance and reduce vulnerability during sleep and the nighttime. This paper will also discuss possible benefits of the proposed adaptations beyond vigilance, as well as the potential costs associated with each of these proposed adaptations. Finally, testable hypotheses will be presented to evaluate the validity of these proposed adaptations.
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33
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Sawicki J, Hartmann L, Bader R, Schöll E. Modelling the perception of music in brain network dynamics. FRONTIERS IN NETWORK PHYSIOLOGY 2022; 2:910920. [PMID: 36926090 PMCID: PMC10013054 DOI: 10.3389/fnetp.2022.910920] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2022] [Accepted: 07/11/2022] [Indexed: 11/13/2022]
Abstract
We analyze the influence of music in a network of FitzHugh-Nagumo oscillators with empirical structural connectivity measured in healthy human subjects. We report an increase of coherence between the global dynamics in our network and the input signal induced by a specific music song. We show that the level of coherence depends crucially on the frequency band. We compare our results with experimental data, which also describe global neural synchronization between different brain regions in the gamma-band range in a time-dependent manner correlated with musical large-scale form, showing increased synchronization just before transitions between different parts in a musical piece (musical high-level events). The results also suggest a separation in musical form-related brain synchronization between high brain frequencies, associated with neocortical activity, and low frequencies in the range of dance movements, associated with interactivity between cortical and subcortical regions.
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Affiliation(s)
- Jakub Sawicki
- Potsdam Institute for Climate Impact Research, Potsdam, Germany
- Institut für Musikpädagogik, Universität der Künste Berlin, Berlin, Germany
- Fachhochschule Nordwestschweiz FHNW, Basel, Switzerland
- Institut für Theoretische Physik, Technische Universität Berlin, Berlin, Germany
| | - Lenz Hartmann
- Institute of Systematic Musicology, University of Hamburg, Hamburg, Germany
| | - Rolf Bader
- Institute of Systematic Musicology, University of Hamburg, Hamburg, Germany
| | - Eckehard Schöll
- Potsdam Institute for Climate Impact Research, Potsdam, Germany
- Institut für Theoretische Physik, Technische Universität Berlin, Berlin, Germany
- Bernstein Center for Computational Neuroscience Berlin, Humboldt-Universität, Berlin, Germany
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El Allali K, Beniaich Y, Farsi H, M′hani MEM, Jabal MS, Piro M, Achaâban MR, Ouassat M, Challet E, Besson M, Mounach J, Pévet P, Satté A. Sleep pattern in the dromedary camel: a behavioral and polysomnography study. Sleep 2022; 45:6580315. [DOI: 10.1093/sleep/zsac101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2021] [Revised: 04/16/2022] [Indexed: 11/14/2022] Open
Abstract
Abstract
Study Objectives
To investigate sleep patterns in the camel by combining behavioral and polysomnography (PSG) methods.
Methods
A noninvasive PSG study was conducted over four nights on four animals. Additionally, video recordings were used to monitor the sleep behaviors associated with different vigilance states.
Results
During the night, short periods of sporadic sleep-like behavior corresponding to a specific posture, sternal recumbency (SR) with the head lying down on the ground, were observed. The PSG results showed rapid shifts between five vigilance states, including wakefulness, drowsiness, rapid eye movement (REM) sleep, non-REM (NREM) sleep, and rumination. The camels typically slept only 1.7 hours per night, subdivided into 0.5 hours of REM sleep and 1.2 hours of NREM sleep. Camels spent most of the night being awake (2.3 hours), ruminating (2.4 hours), or drowsing (1.9 hours). Various combinations of transitions between the different vigilance states were observed, with a notable transition into REM sleep directly from drowsiness (9%) or wakefulness (4%). Behavioral postures were found to correlate with PSG vigilance states, thereby allowing a reliable prediction of the sleep stage based on SR and the head position (erected, motionless, or lying down on the ground). Notably, 100% of REM sleep occurred during the Head Lying Down-SR posture.
Conclusions
The camel is a diurnal species with a polyphasic sleep pattern at night. The best correlation between PSG and ethogram data indicates that sleep duration can be predicted by the behavioral method, provided that drowsiness is considered a part of sleep.
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Affiliation(s)
- Khalid El Allali
- Comparative Anatomy Unit, Department of Biological and Pharmaceutical Veterinary Sciences, Hassan II Agronomy and Veterinary Medicine Institute , Rabat , Morocco
| | - Younes Beniaich
- Comparative Anatomy Unit, Department of Biological and Pharmaceutical Veterinary Sciences, Hassan II Agronomy and Veterinary Medicine Institute , Rabat , Morocco
| | - Hicham Farsi
- Comparative Anatomy Unit, Department of Biological and Pharmaceutical Veterinary Sciences, Hassan II Agronomy and Veterinary Medicine Institute , Rabat , Morocco
| | - Mohammed El Mehdi M′hani
- Comparative Anatomy Unit, Department of Biological and Pharmaceutical Veterinary Sciences, Hassan II Agronomy and Veterinary Medicine Institute , Rabat , Morocco
| | - Mohamed Sobhi Jabal
- Comparative Anatomy Unit, Department of Biological and Pharmaceutical Veterinary Sciences, Hassan II Agronomy and Veterinary Medicine Institute , Rabat , Morocco
| | - Mohammed Piro
- Medicine and Surgical Unit of Domestic Animals, Department of Medicine, Surgery and Reproduction, Hassan II Agronomy and Veterinary Medicine Institute , Rabat , Morocco
| | - Mohamed Rachid Achaâban
- Comparative Anatomy Unit, Department of Biological and Pharmaceutical Veterinary Sciences, Hassan II Agronomy and Veterinary Medicine Institute , Rabat , Morocco
| | - Mohammed Ouassat
- Comparative Anatomy Unit, Department of Biological and Pharmaceutical Veterinary Sciences, Hassan II Agronomy and Veterinary Medicine Institute , Rabat , Morocco
| | - Etienne Challet
- Institute of Cellular and Integrative Neurosciences, CNRS and University of Strasbourg , Strasbourg , France
| | - Mireille Besson
- Cognitive Neurosciences Laboratory, CNRS and Aix-Marseille University , Marseille , France
| | - Jamal Mounach
- Department of Neurophysiology, Military Hospital Mohammed V , Rabat , Morocco
| | - Paul Pévet
- Institute of Cellular and Integrative Neurosciences, CNRS and University of Strasbourg , Strasbourg , France
| | - Amal Satté
- Department of Neurophysiology, Military Hospital Mohammed V , Rabat , Morocco
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35
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Lu Y, Wang C, Deng Q. Rulkov neural network coupled with discrete memristors. NETWORK (BRISTOL, ENGLAND) 2022; 33:214-232. [PMID: 36200906 DOI: 10.1080/0954898x.2022.2131921] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Revised: 09/15/2022] [Accepted: 09/26/2022] [Indexed: 06/16/2023]
Abstract
The features of memristive-coupled neural networks have been studied extensively in the continuous field. However, the particularities of the discrete domain are rarely mentioned. This paper constructs a discrete memristor with sine-type conductance and applies the discrete memristor to coupling the Rulkov neuron maps for the first time. The properties of the proposed memristive-coupled bi-neuron Rulkov map and multi-neuron Rulkov neural network are probed. In order to better characterize the discrete system, many numerical simulation methods are used. Such as the normalized mean synchronization error, bifurcation diagrams, phase portraits, spatiotemporal patterns and so on. Numerical studies have shown that in discrete memristor-coupled neural networks, both parameters and coupling factors affect the dynamics of the system, resulting in complex and interesting behavioural changes.
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Affiliation(s)
- Yanmei Lu
- College of Computer Science and Electronic Engineering, Hunan University, Changsha, China
| | - Chunhua Wang
- College of Computer Science and Electronic Engineering, Hunan University, Changsha, China
| | - Quanli Deng
- College of Computer Science and Electronic Engineering, Hunan University, Changsha, China
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36
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Smeltzer EA, Stead SM, Li MF, Samson D, Kumpan LT, Teichroeb JA. Social sleepers: The effects of social status on sleep in terrestrial mammals. Horm Behav 2022; 143:105181. [PMID: 35594742 DOI: 10.1016/j.yhbeh.2022.105181] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/31/2021] [Revised: 04/12/2022] [Accepted: 04/22/2022] [Indexed: 11/18/2022]
Abstract
Social status among group-living mammals can impact access to resources, such as water, food, social support, and mating opportunities, and this differential access to resources can have fitness consequences. Here, we propose that an animal's social status impacts their access to sleep opportunities, as social status may predict when an animal sleeps, where they sleep, who they sleep with, and how well they sleep. Our review of terrestrial mammals examines how sleep architecture and intensity may be impacted by (1) sleeping conditions and (2) the social experience during wakefulness. Sleeping positions vary in thermoregulatory properties, protection from predators, and exposure to parasites. Thus, if dominant individuals have priority of access to sleeping positions, they may benefit from higher quality sleeping conditions and, in turn, better sleep. With respect to waking experiences, we discuss the impacts of stress on sleep, as it has been established that specific social statuses can be characterized by stress-related physiological profiles. While much research has focused on how dominance hierarchies impact access to resources like food and mating opportunities, differential access to sleep opportunities among mammals has been largely ignored despite its potential fitness consequences.
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Affiliation(s)
- E A Smeltzer
- Department of Anthropology, University of Toronto Scarborough, 1265 Military Trail, Scarborough, Ontario M1C 1A4, Canada
| | - S M Stead
- Department of Anthropology, University of Toronto Scarborough, 1265 Military Trail, Scarborough, Ontario M1C 1A4, Canada.
| | - M F Li
- Department of Anthropology, University of Toronto, 19 Russell St., Toronto, Ontario M5S 2S2, Canada
| | - D Samson
- Department of Anthropology, University of Toronto Mississauga, 3359 Mississauga Rd., Mississauga, Ontario L5L 1C6, Canada
| | - L T Kumpan
- Department of Anthropology, University of Toronto Scarborough, 1265 Military Trail, Scarborough, Ontario M1C 1A4, Canada
| | - J A Teichroeb
- Department of Anthropology, University of Toronto Scarborough, 1265 Military Trail, Scarborough, Ontario M1C 1A4, Canada
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Botha AE, Ansariara M, Emadi S, Kolahchi MR. Chimera Patterns of Synchrony in a Frustrated Array of Hebb Synapses. Front Comput Neurosci 2022; 16:888019. [PMID: 35814347 PMCID: PMC9260432 DOI: 10.3389/fncom.2022.888019] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2022] [Accepted: 05/30/2022] [Indexed: 11/13/2022] Open
Abstract
The union of the Kuramoto–Sakaguchi model and the Hebb dynamics reproduces the Lisman switch through a bistability in synchronized states. Here, we show that, within certain ranges of the frustration parameter, the chimera pattern can emerge, causing a different, time-evolving, distribution in the Hebbian synaptic strengths. We study the stability range of the chimera as a function of the frustration (phase-lag) parameter. Depending on the range of the frustration, two different types of chimeras can appear spontaneously, i.e., from randomized initial conditions. In the first type, the oscillators in the coherent region rotate, on average, slower than those in the incoherent region; while in the second type, the average rotational frequencies of the two regions are reversed, i.e., the coherent region runs, on average, faster than the incoherent region. We also show that non-stationary behavior at finite N can be controlled by adjusting the natural frequency of a single pacemaker oscillator. By slowly cycling the frequency of the pacemaker, we observe hysteresis in the system. Finally, we discuss how we can have a model for learning and memory.
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Affiliation(s)
- A. E. Botha
- Department of Physics, Science Campus, University of South Africa, Private Bag X6, Johannesburg, South Africa
| | - M. Ansariara
- Department of Physics, Institute for Advanced Studies in Basic Sciences, Zanjan, Iran
| | - S. Emadi
- Department of Biological Sciences, Institute for Advanced Studies in Basic Sciences, Zanjan, Iran
| | - M. R. Kolahchi
- Department of Physics, Institute for Advanced Studies in Basic Sciences, Zanjan, Iran
- *Correspondence: M. R. Kolahchi
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Majhi S, Rakshit S, Ghosh D. Oscillation suppression and chimera states in time-varying networks. CHAOS (WOODBURY, N.Y.) 2022; 32:042101. [PMID: 35489845 DOI: 10.1063/5.0087291] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Accepted: 03/11/2022] [Indexed: 06/14/2023]
Abstract
Complex network theory has offered a powerful platform for the study of several natural dynamic scenarios, based on the synergy between the interaction topology and the dynamics of its constituents. With research in network theory being developed so fast, it has become extremely necessary to move from simple network topologies to more sophisticated and realistic descriptions of the connectivity patterns. In this context, there is a significant amount of recent works that have emerged with enormous evidence establishing the time-varying nature of the connections among the constituents in a large number of physical, biological, and social systems. The recent review article by Ghosh et al. [Phys. Rep. 949, 1-63 (2022)] demonstrates the significance of the analysis of collective dynamics arising in temporal networks. Specifically, the authors put forward a detailed excerpt of results on the origin and stability of synchronization in time-varying networked systems. However, among the complex collective dynamical behaviors, the study of the phenomenon of oscillation suppression and that of other diverse aspects of synchronization are also considered to be central to our perception of the dynamical processes over networks. Through this review, we discuss the principal findings from the research studies dedicated to the exploration of the two collective states, namely, oscillation suppression and chimera on top of time-varying networks of both static and mobile nodes. We delineate how temporality in interactions can suppress oscillation and induce chimeric patterns in networked dynamical systems, from effective analytical approaches to computational aspects, which is described while addressing these two phenomena. We further sketch promising directions for future research on these emerging collective behaviors in time-varying networks.
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Affiliation(s)
- Soumen Majhi
- Department of Mathematics, Bar-Ilan University, Ramat-Gan 5290002, Israel
| | - Sarbendu Rakshit
- Physics and Applied Mathematics Unit, Indian Statistical Institute, 203 B. T. Road, Kolkata 700108, India
| | - Dibakar Ghosh
- Physics and Applied Mathematics Unit, Indian Statistical Institute, 203 B. T. Road, Kolkata 700108, India
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Kumar P, Gangopadhyay G. Nonequilibrium thermodynamic characterization of chimeras in a continuum chemical oscillator system. Phys Rev E 2022; 105:034208. [PMID: 35428096 DOI: 10.1103/physreve.105.034208] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2021] [Accepted: 03/04/2022] [Indexed: 06/14/2023]
Abstract
The emergence of the chimera state as the counterintuitive spatial coexistence of synchronous and asynchronous regimes is addressed here in a continuum chemical oscillator system by implementing a relevant complex Ginzburg-Landau equation with global coupling. This study systematically acquires and characterizes the evolution of nonequilibrium thermodynamic entities corresponding to the chimera state. The temporal evolution of the entropy production rate exhibits a beat pattern with a series of equidistant spectral lines in the frequency domain. Symmetric profiles associated with the incoherent regime appear in descriptions of the dynamics and thermodynamics of the chimera. It is shown that identifying the semigrand Gibbs free energy of the state as the Gabor elementary function can reveal the guiding role of the information uncertainty principle in shaping the chimera energetics.
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Affiliation(s)
- Premashis Kumar
- S. N. Bose National Centre for Basic Sciences, Salt Lake, Kolkata 700 106, India
| | - Gautam Gangopadhyay
- S. N. Bose National Centre for Basic Sciences, Salt Lake, Kolkata 700 106, India
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40
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Sathiyadevi K, Chandrasekar VK, Lakshmanan M. Emerging chimera states under nonidentical counter-rotating oscillators. Phys Rev E 2022; 105:034211. [PMID: 35428132 DOI: 10.1103/physreve.105.034211] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2021] [Accepted: 03/04/2022] [Indexed: 06/14/2023]
Abstract
Frequency plays a crucial role in exhibiting various collective dynamics in the coexisting corotating and counter-rotating systems. To illustrate the impact of counter-rotating frequencies, we consider a network of nonidentical and globally coupled Stuart-Landau oscillators with additional perturbation. Primarily, we investigate the dynamical transitions in the absence of perturbation, demonstrating that the transition from desynchronized state to cluster oscillatory state occurs through an interesting partial synchronization state in the oscillatory regime. Following this, the system dynamics transits to amplitude death and oscillation death states. Importantly, we find that the observed dynamical states do not preserve the parity (P) symmetry in the absence of perturbation. When the perturbation is increased one can note that the system dynamics exhibits a kind of transition which corresponds to a change from incoherent mixed synchronization to coherent mixed synchronization through a chimera state. In particular, incoherent mixed synchronization and coherent mixed synchronization states completely preserve the P symmetry, whereas the chimera state preserves the P symmetry only partially. To demonstrate the occurrence of such partial symmetry-breaking (chimera) state, we use basin stability analysis and discover that partial symmetry breaking exists as a result of the coexistence of symmetry-preserving and symmetry-breaking behavior in the initial state space. Further, a measure of the strength of P symmetry is established to quantify the P symmetry in the observed dynamical states. Subsequently, the dynamical transitions are investigated in the parametric spaces. Finally, by increasing the network size, the robustness of the chimera state is also inspected, and we find that the chimera state is robust even in networks of larger sizes. We also show the generality of the above results in the related reduced phase. model as well as in other coupled models such as the globally coupled van der Pol and Rössler oscillators.
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Affiliation(s)
- K Sathiyadevi
- Department of Nonlinear Dynamics, School of Physics, Bharathidasan University, Tiruchirappalli 620 024, Tamil Nadu, India
| | - V K Chandrasekar
- Department of Physics, Centre for Nonlinear Science & Engineering, School of Electrical & Electronics Engineering, SASTRA Deemed University, Thanjavur 613 401, Tamil Nadu, India
| | - M Lakshmanan
- Department of Nonlinear Dynamics, School of Physics, Bharathidasan University, Tiruchirappalli 620 024, Tamil Nadu, India
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41
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Rybalova E, Strelkova G. Response of solitary states to noise-modulated parameters in nonlocally coupled networks of Lozi maps. CHAOS (WOODBURY, N.Y.) 2022; 32:021101. [PMID: 35232034 DOI: 10.1063/5.0082431] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Accepted: 01/20/2022] [Indexed: 06/14/2023]
Abstract
We study numerically the impact of heterogeneity in parameters on the dynamics of nonlocally coupled discrete-time systems, which exhibit solitary states along the transition from coherence to incoherence. These partial synchronization patterns are described as states when single or several elements demonstrate different dynamics compared with the behavior of other elements in a network. Using as an example a ring network of nonlocally coupled Lozi maps, we explore the robustness of solitary states to heterogeneity in parameters of local dynamics or coupling strength. It is found that if these network parameters are continuously modulated by noise, solitary states are suppressed as the noise intensity increases. However, these states may persist in the case of static randomly distributed system parameters for a wide range of the distribution width. Domains of solitary state existence are constructed in the parameter plane of coupling strength and noise intensity using a cross-correlation coefficient.
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Affiliation(s)
- Elena Rybalova
- Institute of Physics, Saratov State University, 83 Astrakhanskaya Street, Saratov 410012, Russia
| | - Galina Strelkova
- Institute of Physics, Saratov State University, 83 Astrakhanskaya Street, Saratov 410012, Russia
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42
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Chimera states and cluster solutions in Hindmarsh-Rose neural networks with state resetting process. Cogn Neurodyn 2022; 16:215-228. [PMID: 35126779 PMCID: PMC8807783 DOI: 10.1007/s11571-021-09691-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2020] [Revised: 05/24/2021] [Accepted: 06/11/2021] [Indexed: 02/03/2023] Open
Abstract
The neuronal state resetting model is a hybrid system, which combines neuronal system with state resetting process. As the membrane potential reaches a certain threshold, the membrane potential and recovery current are reset. Through the resetting process, the neuronal system can produce abundant new firing patterns. By integrating with the state resetting process, the neuronal system can generate irregular limit cycles (limit cycles with impulsive breakpoints), resulting in repetitive spiking or bursting with firing peaks which can not exceed a presetting threshold. Although some studies have discussed the state resetting process in neurons, it has not been addressed in neural networks so far. In this paper, we consider chimera states and cluster solutions in Hindmarsh-Rose neural networks with state resetting process. The network structures are based on regular ring structures and the connections among neurons are assumed to be bidirectional. Chimera and cluster states are two types of phenomena related to synchronization. For neural networks, the chimera state is a self-organization phenomenon in which some neuronal nodes are synchronous while the others are asynchronous. Cluster synchronization divides the system into several subgroups based on their synchronization characteristics, with neuronal nodes in each subgroup being synchronous. By improving previous chimera measures, we detect the spike inspire time instead of the state variable and calculate the time between two adjacent spikes. We then discuss the incoherence, chimera state, and coherence of the constructed neural networks using phase diagrams, time series diagrams, and probability density histograms. Besides, we further contrast the cluster solutions of the system under local and global coupling, respectively. The subordinate state resetting process enriches the firing mode of the proposed Hindmarsh-Rose neural networks.
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43
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Anesiadis K, Provata A. Synchronization in Multiplex Leaky Integrate-and-Fire Networks With Nonlocal Interactions. FRONTIERS IN NETWORK PHYSIOLOGY 2022; 2:910862. [PMID: 36926067 PMCID: PMC10013047 DOI: 10.3389/fnetp.2022.910862] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2022] [Accepted: 05/25/2022] [Indexed: 11/13/2022]
Abstract
We study synchronization phenomena in a multiplex network composed of two rings with identical Leaky Integrate-and-Fire (LIF) oscillators located on the nodes of the rings. Within each ring the LIF oscillators interact nonlocally, while between rings there are one-to-one inter-ring interactions. This structure is motivated by the observed connectivity between the two hemispheres of the brain: within each hemisphere the various brain regions interact with neighboring regions, while across hemispheres each region interacts, primarily, with the functionally homologous region. We consider both positive (excitatory) and negative (inhibitory) linking. We identify numerically various parameter regimes where the multiplex network develops coexistence of active and subthreshold domains, chimera states, solitary states, full coherence or incoherence. In particular, for weak inter-ring coupling (weak multiplexing) different synchronization patterns on the two rings are supported. These are stable and are obtained when the intra-ring coupling values are near the critical points separating qualitatively distinct synchronization regimes, e.g., between the travelling fronts regime and the chimera state one.
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Affiliation(s)
- K Anesiadis
- Institute of Nanoscience and Nanotechnology, National Center for Scientific Research "Demokritos", Athens, Greece.,School of Applied Mathematical and Physical Sciences, National Technical University of Athens, Athens, Greece
| | - A Provata
- Institute of Nanoscience and Nanotechnology, National Center for Scientific Research "Demokritos", Athens, Greece
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44
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Kaper TJ, Vo T. A new class of chimeras in locally coupled oscillators with small-amplitude, high-frequency asynchrony and large-amplitude, low-frequency synchrony. CHAOS (WOODBURY, N.Y.) 2021; 31:123111. [PMID: 34972325 DOI: 10.1063/5.0067421] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2021] [Accepted: 11/17/2021] [Indexed: 06/14/2023]
Abstract
Chimeras are surprising yet important states in which domains of decoherent (asynchronous) and coherent (synchronous) oscillations co-exist. In this article, we report on the discovery of a new class of chimeras, called mixed-amplitude chimera states, in which the structures, amplitudes, and frequencies of the oscillations differ substantially in the decoherent and coherent regions. These mixed-amplitude chimeras exhibit domains of decoherent small-amplitude oscillations (phase waves) coexisting with domains of stable and coherent large-amplitude or mixed-mode oscillations (MMOs). They are observed in a prototypical bistable partial differential equation with oscillatory dynamics, spatially homogeneous kinetics, and purely local, isotropic diffusion. They are observed in parameter regimes immediately adjacent to regimes in which common large-amplitude solutions exist, such as trigger waves, spatially homogeneous MMOs, and sharp-interface solutions. Also, key singularities, folded nodes, and folded saddles arising commonly in multi-scale, bistable systems play important roles, and these have not previously been studied in systems with chimeras. The discovery of these mixed-amplitude chimeras is an important advance for understanding some processes in neuroscience, pattern formation, and physics, which involve both small-amplitude and large-amplitude oscillations. It may also be of use for understanding some aspects of electroencephalogram recordings from animals that exhibit unihemispheric slow-wave sleep.
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Affiliation(s)
- Tasso J Kaper
- Department of Mathematics and Statistics, Boston University, Boston, Massachusetts 02215, USA
| | - Theodore Vo
- School of Mathematics, Monash University, Clayton, Victoria 3800, Australia
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45
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Kachhara S, Ambika G. Frequency chimera state induced by differing dynamical timescales. Phys Rev E 2021; 104:064214. [PMID: 35030851 DOI: 10.1103/physreve.104.064214] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2021] [Accepted: 12/04/2021] [Indexed: 06/14/2023]
Abstract
We report the occurrence of a self-emerging frequency chimera state in spatially extended systems of coupled oscillators, where the coherence and incoherence are defined with respect to the emergent frequency of the oscillations. This is generated by the local coupling among nonlinear oscillators evolving under differing dynamical timescales starting from random initial conditions. We show how they self-organize to structured patterns with spatial domains of coherence that are in frequency synchronization, coexisting with domains that are incoherent in frequencies. Our study has relevance in understanding such patterns observed in real-world systems like neuronal systems, power grids, social and ecological networks, where differing dynamical timescales is natural and realistic among the interacting systems.
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Affiliation(s)
- Sneha Kachhara
- Indian Institute of Science Education and Research (IISER) Tirupati, Tirupati 517507, India
| | - G Ambika
- Indian Institute of Science Education and Research (IISER) Tirupati, Tirupati 517507, India
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46
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Lee S, Krischer K. Attracting Poisson chimeras in two-population networks. CHAOS (WOODBURY, N.Y.) 2021; 31:113101. [PMID: 34881613 DOI: 10.1063/5.0065710] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2021] [Accepted: 10/11/2021] [Indexed: 06/13/2023]
Abstract
Chimera states, i.e., dynamical states composed of coexisting synchronous and asynchronous oscillations, have been reported to exist in diverse topologies of oscillators in simulations and experiments. Two-population networks with distinct intra- and inter-population coupling have served as simple model systems for chimera states since they possess an invariant synchronized manifold in contrast to networks on a spatial structure. Here, we study dynamical and spectral properties of finite-sized chimeras on two-population networks. First, we elucidate how the Kuramoto order parameter of the finite-sized globally coupled two-population network of phase oscillators is connected to that of the continuum limit. These findings suggest that it is suitable to classify the chimera states according to their order parameter dynamics, and therefore, we define Poisson and non-Poisson chimera states. We then perform a Lyapunov analysis of these two types of chimera states, which yields insight into the full stability properties of the chimera trajectories as well as of collective modes. In particular, our analysis also confirms that Poisson chimeras are neutrally stable. We then introduce two types of "perturbation" that act as small heterogeneities and render Poisson chimeras attracting: A topological variation via the simplest nonlocal intra-population coupling that keeps the network symmetries and the allowance of amplitude variations in the globally coupled two-population network; i.e., we replace the phase oscillators by Stuart-Landau oscillators. The Lyapunov spectral properties of chimera states in the two modified networks are investigated, exploiting an approach based on network symmetry-induced cluster pattern dynamics of the finite-size network.
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Affiliation(s)
- Seungjae Lee
- Physik-Department, Technische Universität München, James-Franck-Straße 1, 85748 Garching, Germany
| | - Katharina Krischer
- Physik-Department, Technische Universität München, James-Franck-Straße 1, 85748 Garching, Germany
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47
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Mohanty NP, Wagener C, Herrel A, Thaker M. The ecology of sleep in non-avian reptiles. Biol Rev Camb Philos Soc 2021; 97:505-526. [PMID: 34708504 DOI: 10.1111/brv.12808] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Revised: 10/10/2021] [Accepted: 10/18/2021] [Indexed: 01/10/2023]
Abstract
Sleep is ubiquitous in the animal kingdom and yet displays considerable variation in its extent and form in the wild. Ecological factors, such as predation, competition, and microclimate, therefore are likely to play a strong role in shaping characteristics of sleep. Despite the potential for ecological factors to influence various aspects of sleep, the ecological context of sleep in non-avian reptiles remains understudied and without systematic direction. In this review, we examine multiple aspects of reptilian sleep, including (i) habitat selection (sleep sites and their spatio-temporal distribution), (ii) individual-level traits, such as behaviour (sleep postures), morphology (limb morphometrics and body colour), and physiology (sleep architecture), as well as (iii) inter-individual interactions (intra- and inter-specific). Throughout, we discuss the evidence of predation, competition, and thermoregulation in influencing sleep traits and the possible evolutionary consequences of these sleep traits for reptile sociality, morphological specialisation, and habitat partitioning. We also review the ways in which sleep ecology interacts with urbanisation, biological invasions, and climate change. Overall, we not only provide a systematic evaluation of the conceptual and taxonomic biases in the existing literature on reptilian sleep, but also use this opportunity to organise the various ecological hypotheses for sleep characteristics. By highlighting the gaps and providing a prospectus of research directions, our review sets the stage for understanding sleep ecology in the natural world.
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Affiliation(s)
- Nitya P Mohanty
- Centre for Ecological Sciences, Indian Institute of Science, Bangalore, 560 012, India
| | - Carla Wagener
- Centre for Invasion Biology, Department of Botany and Zoology, Stellenbosch University, Stellenbosch, Western Cape, 7600, South Africa
| | - Anthony Herrel
- Département Adaptations du Vivant, MECADEV UMR7179 CNRS/MNHN, Paris, France
| | - Maria Thaker
- Centre for Ecological Sciences, Indian Institute of Science, Bangalore, 560 012, India
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48
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Jaros P, Levchenko R, Kapitaniak T, Maistrenko Y. Chimera states for directed networks. CHAOS (WOODBURY, N.Y.) 2021; 31:103111. [PMID: 34717326 DOI: 10.1063/5.0059765] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Accepted: 09/28/2021] [Indexed: 06/13/2023]
Abstract
We demonstrate that chimera behavior can be observed in ensembles of phase oscillators with unidirectional coupling. For a small network consisting of only three identical oscillators (cyclic triple), tiny chimera islands arise in the parameter space. They are surrounded by developed chaotic switching behavior caused by a collision of rotating waves propagating in opposite directions. For larger networks, as we show for a hundred oscillators (cyclic century), the islands merge into a single chimera continent, which incorporates the world of chimeras of different configurations. The phenomenon inherits from networks with intermediate ranges of the unidirectional coupling and it diminishes as the coupling range decreases.
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Affiliation(s)
- Patrycja Jaros
- Division of Dynamics, Lodz University of Technology, Stefanowskiego 1/15, 90-924 Lodz, Poland
| | | | - Tomasz Kapitaniak
- Division of Dynamics, Lodz University of Technology, Stefanowskiego 1/15, 90-924 Lodz, Poland
| | - Yuri Maistrenko
- Division of Dynamics, Lodz University of Technology, Stefanowskiego 1/15, 90-924 Lodz, Poland
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49
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Reicher V, Kis A, Simor P, Bódizs R, Gácsi M. Interhemispheric asymmetry during NREM sleep in the dog. Sci Rep 2021; 11:18817. [PMID: 34552141 PMCID: PMC8458274 DOI: 10.1038/s41598-021-98178-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2021] [Accepted: 08/12/2021] [Indexed: 02/08/2023] Open
Abstract
Functional hemispheric asymmetry was evidenced in many species during sleep. Dogs seem to show hemispheric asymmetry during wakefulness; however, their asymmetric neural activity during sleep was not yet explored. The present study investigated interhemispheric asymmetry in family dogs using non-invasive polysomnography. EEG recordings during 3-h-long afternoon naps were carried out (N = 19) on two occasions at the same location. Hemispheric asymmetry was assessed during NREM sleep, using bilateral EEG channels. To include periods with high homeostatic sleep pressure and to reduce the variance of the time spent in NREM sleep between dogs, the first two sleep cycles were analysed. Left hemispheric predominance of slow frequency range was detected in the first sleep cycle of sleep recording 1, compared to the baseline level of zero asymmetry as well as to the first sleep cycle of sleep recording 2. Regarding the strength of hemispheric asymmetry, we found greater absolute hemispheric asymmetry in the second sleep cycle of sleep recording 1 and 2 in the frequency ranges of alpha, sigma and beta, compared to the first sleep cycle. Differences between sleep recordings and consecutive sleep cycles might be indicative of adaptation-like processes, but do not closely resemble the results described in humans.
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Affiliation(s)
- Vivien Reicher
- Department of Ethology, Institute of Biology, Eötvös Loránd University, Budapest, Hungary.
- MTA-ELTE Comparative Ethology Research Group, Budapest, Hungary.
| | - Anna Kis
- Institute of Cognitive Neuroscience and Psychology, Research Centre for Natural Sciences, Budapest, Hungary
| | - Péter Simor
- Institute of Psychology, Eötvös Loránd University, Budapest, Hungary
| | - Róbert Bódizs
- Institute of Behavioural Sciences, Semmelweis University, Budapest, Hungary
- National Institute of Clinical Neurosciences, Budapest, Hungary
| | - Márta Gácsi
- Department of Ethology, Institute of Biology, Eötvös Loránd University, Budapest, Hungary
- MTA-ELTE Comparative Ethology Research Group, Budapest, Hungary
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50
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Kundu S, Muruganandam P, Ghosh D, Lakshmanan M. Amplitude-mediated spiral chimera pattern in a nonlinear reaction-diffusion system. Phys Rev E 2021; 103:062209. [PMID: 34271612 DOI: 10.1103/physreve.103.062209] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2021] [Accepted: 05/21/2021] [Indexed: 11/07/2022]
Abstract
Formation of diverse patterns in spatially extended reaction-diffusion systems is an important aspect of study that is pertinent to many chemical and biological processes. Of special interest is the peculiar phenomenon of chimera state having spatial coexistence of coherent and incoherent dynamics in a system of identically interacting individuals. In the present article, we report the emergence of various collective dynamical patterns while considering a system of prey-predator dynamics in the presence of a two-dimensional diffusive environment. Particularly, we explore the observance of four distinct categories of spatial arrangements among the species, namely, spiral wave, spiral chimera, completely synchronized oscillations, and oscillation death states in a broad region of the diffusion-driven parameter space. Emergence of amplitude-mediated spiral chimera states displaying drifted amplitudes and phases in the incoherent subpopulation is detected for parameter values beyond both Turing and Hopf bifurcations. Transition scenarios among all these distinguishable patterns are numerically demonstrated for a wide range of the diffusion coefficients which reveal that the chimera states arise during the transition from oscillatory to steady-state dynamics. Furthermore, we characterize the occurrence of each of the recognizable patterns by estimating the strength of incoherent subpopulations in the two-dimensional space.
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Affiliation(s)
- Srilena Kundu
- Physics and Applied Mathematics Unit, Indian Statistical Institute, 203 B. T. Road, Kolkata-700108, India
| | | | - Dibakar Ghosh
- Physics and Applied Mathematics Unit, Indian Statistical Institute, 203 B. T. Road, Kolkata-700108, India
| | - M Lakshmanan
- Department of Nonlinear Dynamics, School of Physics, Bharathidasan University, Tiruchirapalli-620024, India
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