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Muflihah, Hardianto A, Kusumaningtyas P, Prabowo S, Hartati YW. DNA-based detection of pork content in food. Heliyon 2023; 9:e14418. [PMID: 36938408 PMCID: PMC10020109 DOI: 10.1016/j.heliyon.2023.e14418] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2023] [Revised: 02/24/2023] [Accepted: 03/06/2023] [Indexed: 03/09/2023] Open
Abstract
Determination of halal food is essential in ensuring the tranquillity of consumers, especially Muslims. Halal products mean they are free from prohibited ingredients according to Islamic law. One ingredient that is prohibited is food products containing pork and its derivatives. An accurate verification method with a fast result is necessary to meet this requirement for halal food. DNA quantification of pork is now believed to be able to make accurate and quick decisions, as DNA acts as a reservoir or biological characterization of all living things, including pigs, according to specific characteristics of molecular and connection settings. Various DNA-based methods developed include PCR, biosensor and CRISPR methods. This review discussed various DNA-based Keywords: biosensor, CRISPR, detection, DNA, pork, PCR methods, including PCR, biosensor and CRISPR, to detect pork content in food. Among these methods, CRISPR is considered the easiest, fastest and most accurate. Therefore, it is important to develop this method further in the future. In this article, we provide a short review on DNA-based methods for detection of pork content in food products.
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Affiliation(s)
- Muflihah
- Doctoral Program in Analytical Chemistry, FMIPA Universitas Padjadjaran, Bandung, 45363, Indonesia
- Chemistry Education Study Program, Faculty of Teacher Training and Education, Universitas Mulawarman Samarinda, 75119, Indonesia
| | - Ari Hardianto
- Doctoral Program in Analytical Chemistry, FMIPA Universitas Padjadjaran, Bandung, 45363, Indonesia
| | - Pintaka Kusumaningtyas
- Chemistry Education Study Program, Faculty of Teacher Training and Education, Universitas Mulawarman Samarinda, 75119, Indonesia
| | - Sulistyo Prabowo
- Halal Center, Universitas Mulawarman, Samarinda, 75119 Indonesia
| | - Yeni Wahyuni Hartati
- Doctoral Program in Analytical Chemistry, FMIPA Universitas Padjadjaran, Bandung, 45363, Indonesia
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2
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Stefanova P, Gotcheva V, Angelov A. PCR analysis for meat products authenticity - detection of horse meat. BIO WEB OF CONFERENCES 2023. [DOI: 10.1051/bioconf/20235802004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/12/2023] Open
Abstract
Food adulteration regarding species origin of meats is a common problem in the meat products sector. With regard to horse meat, its undeclared use in food products is not only a fraud, but could present a health risk since is often associated with the presence of the veterinary drug phenylbutazone in meat products. Therefore, it is important to use reliable methods for authentication of meat products regarding their species composition, which are applicable to complex food matrices. Polymerase chain reaction (PCR) with species-specific primers remains the most widely used analytical approach to detect species-related food adulteration due to its high sensitivity and specificity. The aim of the present study was to establish the authenticity of 20 different meat products on the Bulgarian market without declared horse meat content by using a species-specific PCR method. The specificity test of the PCR method used showed no amplification of DNA from beef and pork. A detection limit of 0.01% horse DNA in three-component meat mixtures was established for the PCR method. The PCR method enabled detection of undeclared presence of horse meat in 25% of the analyzed meat products, which demonstrates the need for strict control regarding authenticity in the meat food chain.
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Wang L, Zuo Y, Xue Z, Zuo T, Lu H, Zhang T. A simple and effective PCR assay to detect the origin of meat in food using mitochondrial DNA. J Verbrauch Lebensm 2022. [DOI: 10.1007/s00003-022-01388-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/16/2022]
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Mounika T, Girish PS, Shashi Kumar M, Kumari A, Singh S, Karabasanavar NS. Identification of sheep ( Ovis aries) meat by alkaline lysis-loop mediated isothermal amplification technique targeting mitochondrial D-loop region. Journal of Food Science and Technology 2021; 58:3825-3834. [PMID: 34471306 DOI: 10.1007/s13197-020-04843-2] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Revised: 09/30/2020] [Accepted: 10/08/2020] [Indexed: 11/29/2022]
Abstract
Identification of meat species origin using reliable techniques is a critical requirement for ensuring label compliance, protection of consumer preference and prevention of fraudulence in the meat trade. Although a plethora of protein and DNA based meat species identification techniques are in vogue, need for rapid test suitable for under-resourced laboratories catering point-of-care (PoC) services was construed. Present study deals with development of rapid sheep (Ovis aries) meat identification technique using DNA extraction by alkaline lysis (AL) and loop-mediated isothermal amplification (LAMP) technique. The AL-LAMP specifically amplifies sheep-specific signal of mitochondrial D loop region under an isothermal temperature of 60 °C with an analytical sensitivity of 0.5 ng sheep DNA. The test was highly specific to sheep and performed well even in the presence of DNA of closely related meat animal species such as goat, cattle, buffalo and chicken. The novel primers designed for the AL-LAMP successfully detected sheep meat in raw and cooked meat samples heated up to 121 °C for 30 min. Sheep-specific AL-LAMP assay could detect 0.1% mutton-in-beef adulteration. Novel AL-LAMP assay being simple, rapid and reliable for sheep meat authentication in just 120 min; hence, it could be conveniently used by terminal laboratories engaged in rendering on-site or PoC services.
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Affiliation(s)
- T Mounika
- College of Veterinary Science, Rajendranagar, Hyderabad, Telangana State 500030 India
| | - P S Girish
- ICAR - National Research Centre on Meat, Chengicherla, Hyderabad, Telangana State 500092 India
| | - M Shashi Kumar
- College of Veterinary Science, Rajendranagar, Hyderabad, Telangana State 500030 India
| | - Aparana Kumari
- ICAR - National Research Centre on Meat, Chengicherla, Hyderabad, Telangana State 500092 India
| | - Sujatha Singh
- College of Veterinary Science, Rajendranagar, Hyderabad, Telangana State 500030 India
| | - Nagappa S Karabasanavar
- Karnataka Veterinary, Animal and Fisheries Sciences University, Veterinary College, Gokula Campus, Vidyanagar, Hassan, Karnataka 573202 India
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Khalil I, Hashem A, Nath AR, Muhd Julkapli N, Yehye WA, Basirun WJ. DNA/Nano based advanced genetic detection tools for authentication of species: Strategies, prospects and limitations. Mol Cell Probes 2021; 59:101758. [PMID: 34252563 DOI: 10.1016/j.mcp.2021.101758] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2021] [Revised: 06/20/2021] [Accepted: 07/06/2021] [Indexed: 10/20/2022]
Abstract
Authentication, detection and quantification of ingredients, and adulterants in food, meat, and meat products are of high importance these days. The conventional techniques for the detection of meat species based on lipid, protein and DNA biomarkers are facing challenges due to the poor selectivity, sensitivity and unsuitability for processed food products or complex food matrices. On the other hand, DNA based molecular techniques and nanoparticle based DNA biosensing strategies are gathering huge attention from the scientific communities, researchers and are considered as one of the best alternatives to the conventional strategies. Though nucleic acid based molecular techniques such as PCR and DNA sequencing are getting greater successes in species detection, they are still facing problems from its point-of-care applications. In this context, nanoparticle based DNA biosensors have gathered successes in some extent but not to a satisfactory stage to mark with. In recent years, many articles have been published in the area of progressive nucleic acid-based technologies, however there are very few review articles on DNA nanobiosensors in food science and technology. In this review, we present the fundamentals of DNA based molecular techniques such as PCR, DNA sequencing and their applications in food science. Moreover, the in-depth discussions of different DNA biosensing strategies or more specifically electrochemical and optical DNA nanobiosensors are presented. In addition, the significance of DNA nanobiosensors over other advanced detection technologies is discussed, focusing on the deficiencies, advantages as well as current challenges to ameliorate with the direction for future development.
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Affiliation(s)
- Ibrahim Khalil
- Nanotechnology and Catalysis Research Center (NANOCAT), Institute for Advanced Studies (IAS), Universiti Malaya, 50603, Kuala Lumpur, Malaysia; Healthcare Pharmaceuticals Ltd., Rajendrapur, Gazipur, Bangladesh
| | - Abu Hashem
- Nanotechnology and Catalysis Research Center (NANOCAT), Institute for Advanced Studies (IAS), Universiti Malaya, 50603, Kuala Lumpur, Malaysia; Microbial Biotechnology Division, National Institute of Biotechnology, Ganakbari, Ashulia, Savar, Dhaka, 1349, Bangladesh
| | - Amit R Nath
- Nanotechnology and Catalysis Research Center (NANOCAT), Institute for Advanced Studies (IAS), Universiti Malaya, 50603, Kuala Lumpur, Malaysia; Shenzhen Grubbs Institute and Department of Chemistry, Southern University of Science and Technology, 518055, China
| | - Nurhidayatullaili Muhd Julkapli
- Nanotechnology and Catalysis Research Center (NANOCAT), Institute for Advanced Studies (IAS), Universiti Malaya, 50603, Kuala Lumpur, Malaysia.
| | - Wageeh A Yehye
- Nanotechnology and Catalysis Research Center (NANOCAT), Institute for Advanced Studies (IAS), Universiti Malaya, 50603, Kuala Lumpur, Malaysia
| | - Wan Jeffrey Basirun
- Nanotechnology and Catalysis Research Center (NANOCAT), Institute for Advanced Studies (IAS), Universiti Malaya, 50603, Kuala Lumpur, Malaysia; Department of Chemistry, Universiti Malaya, Malaysia
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Uddin SMK, Hossain MAM, Chowdhury ZZ, Johan MRB. Short targeting multiplex PCR assay to detect and discriminate beef, buffalo, chicken, duck, goat, sheep and pork DNA in food products. Food Addit Contam Part A Chem Anal Control Expo Risk Assess 2021; 38:1273-1288. [PMID: 34077338 DOI: 10.1080/19440049.2021.1925748] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Abstract
Food fraud is a global problem raising increased concerns during the past decades and food authenticity is now a burning issue. Beef, buffalo, chicken, duck, goat, sheep, and pork are heavily consumed meats bearing nutritional, economic and cultural/religious importance and are often found to be adulterated in raw and processed states. To authenticate these species, we developed and validated a highly specific multiplex (heptaplex) PCR assay targeting short length amplicons (73-263 bp) using seven pairs of species-specific primer sets targeting mitochondrial cytochrome b (cytb) and NADH dehydrogenase subunit 5 (ND5) genes. Specificity checking (in silico and in vitro) against 25 non-target species revealed no cross-species amplification. The developed multiplex assay was validated with various adulterated and heat-treated (boiled, microwaved and autoclaved) meatball products and were found to show high sensitivity and stability under all processing conditions. The assay was sensitive enough to detect 0.01-0.005 ng of DNA from raw meat and 0.5% (w/w) adulterated meat in mixed matrices. A market survey revealed mislabelling of 95% beef and 15% chicken products while pork products were found pure. Given some advantageous features including short sizes of amplicons, exceptional stability and superior sensitivity, the developed assay could be conveniently used for discriminatory detection of target species with a variety of raw meat as well as processed meat products undergoing extreme processing treatments.
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Affiliation(s)
- Syed Muhammad Kamal Uddin
- Nanotechnology and Catalysis Research Centre (NANOCAT), University of Malaya, Kuala Lumpur, Malaysia
| | - M A Motalib Hossain
- Nanotechnology and Catalysis Research Centre (NANOCAT), University of Malaya, Kuala Lumpur, Malaysia
| | - Zaira Zaman Chowdhury
- Nanotechnology and Catalysis Research Centre (NANOCAT), University of Malaya, Kuala Lumpur, Malaysia
| | - Mohd Rafie Bin Johan
- Nanotechnology and Catalysis Research Centre (NANOCAT), University of Malaya, Kuala Lumpur, Malaysia
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7
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Mansouri M, Fathi F, Jalili R, Shoeibie S, Dastmalchi S, Khataee A, Rashidi MR. SPR enhanced DNA biosensor for sensitive detection of donkey meat adulteration. Food Chem 2020; 331:127163. [DOI: 10.1016/j.foodchem.2020.127163] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2019] [Revised: 04/15/2020] [Accepted: 05/25/2020] [Indexed: 11/15/2022]
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Cahyadi M, Wibowo T, Pramono A, Abdurrahman ZH. A Novel Multiplex-PCR Assay to Detect Three Non-Halal Meats Contained in Meatball using Mitochondrial 12S rRNA Gene. Food Sci Anim Resour 2020; 40:628-635. [PMID: 32734269 PMCID: PMC7372981 DOI: 10.5851/kosfa.2020.e40] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2020] [Revised: 05/11/2020] [Accepted: 05/28/2020] [Indexed: 12/03/2022] Open
Abstract
The objective of this study was to detect three non-halal meat products consisted
of dog, pork, and rat species in meatball using novel multiplex-PCR with 12S
rRNA gene as target sites. A total of 33 self-made meatballs were used, and they
were grouped into eleven types of meatball based on meat species origin
contained in the meatballs. Each type consisted of three meatballs. Extraction
of genomic DNA from the meatballs was used as a DNA template for simplex-,
duplex-, and multiplex-PCR processes. The result of simplex-PCR, duplex-PCR, and
multiplex-PCR showed that the 12S rRNA primer gene successfully amplified DNA
for each species bovine, dog, pig, and rat, which are respectively indicated by
155, 244, 357, and 491 bp of DNA bands. In addition, multiplex-PCR with 12S rRNA
gene primers can be uniquely and accurately used for detection bovine, dog, pig,
and rat species on beef meatball in one reaction.
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Affiliation(s)
- Muhammad Cahyadi
- Department of Animal Science, Faculty of Agriculture, Sebelas Maret University, Surakarta 57126, Indonesia
| | - Tommy Wibowo
- Department of Animal Science, Faculty of Agriculture, Sebelas Maret University, Surakarta 57126, Indonesia
| | - Ahmad Pramono
- Department of Animal Science, Faculty of Agriculture, Sebelas Maret University, Surakarta 57126, Indonesia
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Suryawan GY, Suardana IW, Wandia IN. Sensitivity of polymerase chain reaction in the detection of rat meat adulteration of beef meatballs in Indonesia. Vet World 2020; 13:905-908. [PMID: 32636586 PMCID: PMC7311886 DOI: 10.14202/vetworld.2020.905-908] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2019] [Accepted: 04/07/2020] [Indexed: 11/16/2022] Open
Abstract
Background and Aim: Meatballs are a processed product of animal origin that is consumed cooked, usually with chicken, beef, or pork as the main ingredient. Unfortunately, some unscrupulous sellers in Indonesia may adulterate this product with rat meat to decrease production costs. Rat meat in any food is a critical public health issue and is prohibited under Indonesian food safety laws, as well as within Muslim communities. This study aimed to test the sensitivity of the polymerase chain reaction (PCR) method in the detection of rat meat contained in processed, cooked beef meatballs. Materials and Methods: Beef meatballs were formulated with different concentrations of rat meat. Molecular detection of adulteration was initiated by DNA extraction of each cooked meatball formulation followed by PCR using a specific primer for mitochondrial DNA Cytochrome b gene of rat, which primer sequences, i.e., forward primer: 5’CATGGGGACGAGGACTATACTATG ’3 and reverse primer: 5’GTAGTCCCAATGTAAGGGATAGCTG’3. Results: Our study showed that the PCR method is sensitive in detecting 5% or greater rat meat adulteration of cooked beef meatballs. Conclusion: The PCR method can be used to detect most rat meat adulteration of cooked beef meatballs and offers a sensitive and effective means to protect food safety and religious requirements in Indonesia.
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Affiliation(s)
- G Y Suryawan
- Department of Veterinary Medicine, Faculty of Veterinary Medicine, Udayana University, Jl. PB. Sudirman, Denpasar, Bali, Indonesia
| | - I W Suardana
- Department of Preventive Veterinary Medicine, Laboratory of Veterinary Public Health, Faculty of Veterinary Medicine, Udayana University, Jl. PB. Sudirman, Denpasar, Bali, Indonesia
| | - I N Wandia
- Department of Basic Veterinary Medicine, Laboratory of Veterinary Anatomy, Faculty of Veterinary Medicine, Udayana University, Jl. PB. Sudirman, Denpasar, Bali, Indonesia
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10
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Mansouri M, Khalilzadeh B, Barzegari A, Shoeibi S, Isildak S, Bargahi N, Omidi Y, Dastmalchi S, Rashidi MR. Design a highly specific sequence for electrochemical evaluation of meat adulteration in cooked sausages. Biosens Bioelectron 2019; 150:111916. [PMID: 31818752 DOI: 10.1016/j.bios.2019.111916] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2019] [Revised: 11/19/2019] [Accepted: 11/22/2019] [Indexed: 01/16/2023]
Abstract
A specific and unique sequence probe was designed for detection of donkey adulteration in cooked sausages and its species specificity was confirmed bioinformatically in the common software and website (ClustalX and NCBI). Subsequently, a novel species-specific electrochemical DNA probe (locked nucleic acid, LNA) was synthesized and implemented in a construction of DNA-based electrochemical genosensor for sensitive, convenient and selective detection of donkey adulteration. The electrochemical behavior of the fabricated genosensor was studied by linear sweep, square wave, differential pulse voltammetry and electrochemical impedance spectroscopy techniques. Due to inherent optimal hybridization conditions, the lower limit of quantification (LLOQ) was obtained as 148 pM with a relative standard deviation of 0.16%. Eventually, as a proof of concept, the designed biosensor was successfully used for detection of donkey genetic element in consumable beef sausages preparations, as a real sample. It is predicted that the proposed biosensor will provide a sensitive, inexpensive, fast, and reliable bioassay for application in food analysis, forensic investigations, genetic screening and biodiagnostics. As a prominent feature of this study, the recorded results were confirmed by quantitative real time-polymerase chain reaction (QRT-PCR) as a standard method in adulteration analysis. Our future perspective is minutralization of the development bioassay for making on-desk device and specially merging the designed system by microfluidic systems for accelerating the analysis time.
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Affiliation(s)
- Maryam Mansouri
- Faculty of Pharmacy, Tabriz University of Medical Sciences, Tabriz, Iran
| | - Balal Khalilzadeh
- Stem Cell Research Center, Tabriz University of Medical Sciences, Tabriz, Iran; Biosensors and Bioelectronics Research Center, Ardabil University of Medical Sciences, Ardabil, Iran.
| | - Aboulfazl Barzegari
- Research Center for Pharmaceutical Nanotechnology (RCPN), Tabriz University of Medical Sciences, Tabriz, Iran
| | - Shahram Shoeibi
- Food and Drug Laboratories Research Center (FDLRC), Iran Food and Drug Administration (IFDA), Ministry of Health and Medical Education (MOH), Tehran, Iran
| | - Selim Isildak
- Department of Bioengineering, Faculty of Chemical and Metallurgical Engineering, Yildiz Technical University, 34210, Esenler, Istanbul, Turkey
| | - Nasrin Bargahi
- Biotechnology Research Center, Tabriz University of Medical Sciences, Tabriz, Iran
| | - Yadollah Omidi
- Faculty of Pharmacy, Tabriz University of Medical Sciences, Tabriz, Iran; Research Center for Pharmaceutical Nanotechnology (RCPN), Tabriz University of Medical Sciences, Tabriz, Iran
| | - Siavoush Dastmalchi
- Biotechnology Research Center, Tabriz University of Medical Sciences, Tabriz, Iran; Faculty of Pharmacy, Tabriz University of Medical Sciences, Tabriz, Iran
| | - Mohammad-Reza Rashidi
- Faculty of Pharmacy, Tabriz University of Medical Sciences, Tabriz, Iran; Research Center for Pharmaceutical Nanotechnology (RCPN), Tabriz University of Medical Sciences, Tabriz, Iran.
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Matsumoto C, Kyota Y, Yamanaka S, Murakawa N, Kikunaga R, Yamada Y, Kawachi H. Molecular identification of biwa trout ( Oncorhynchus masou rhodurus) using PCR-RFLP method. JOURNAL OF FOOD SCIENCE AND TECHNOLOGY 2019; 56:4705-4713. [PMID: 31686702 DOI: 10.1007/s13197-019-03914-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Revised: 06/02/2019] [Accepted: 07/02/2019] [Indexed: 11/30/2022]
Abstract
Polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) analysis was used to identify meat from biwa trout (Oncorhynchus masou rhodurus), amago trout (Oncorhynchus masou ishikawae), yamame trout (Oncorhynchus masou masou), and rainbow trout (Oncorhynchus mykiss). PCR amplification was conducted using primers flanking conserved regions of NADH dehydrogenase subunits 4 and 5 (ND4-ND5) (2848 bp) and ND1 (1091 bp) genes of mitochondrial DNA following restriction digestion with the enzyme HaeIII. Although the segments of ND4-ND5 and ND1 genes showed intraspecies variation, the generation of DNA fragments larger than 300 bp and 160 bp following cleavage by HaeIII of ND4-ND5 and ND1, respectively, was efficient to differentiate the four species. Furthermore, this method was successful in species identification even when using PCR-amplified products obtained from thermally processed biwa trout samples. This sensitive technique can be utilized to reveal commercial fraud, where biwa trout is adulterated with meat from cheaper counterparts.
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Affiliation(s)
- Chihiro Matsumoto
- Faculty of Bioscience, Nagahama Institute of Bio-Science and Technology, Tamura 1266, Nagahama, Shiga 526-0829 Japan
| | - Yukino Kyota
- Faculty of Bioscience, Nagahama Institute of Bio-Science and Technology, Tamura 1266, Nagahama, Shiga 526-0829 Japan
| | - Shunya Yamanaka
- Faculty of Bioscience, Nagahama Institute of Bio-Science and Technology, Tamura 1266, Nagahama, Shiga 526-0829 Japan
| | - Naoki Murakawa
- Faculty of Bioscience, Nagahama Institute of Bio-Science and Technology, Tamura 1266, Nagahama, Shiga 526-0829 Japan
| | - Ryutaro Kikunaga
- Faculty of Bioscience, Nagahama Institute of Bio-Science and Technology, Tamura 1266, Nagahama, Shiga 526-0829 Japan
| | - Yoshihiro Yamada
- Faculty of Bioscience, Nagahama Institute of Bio-Science and Technology, Tamura 1266, Nagahama, Shiga 526-0829 Japan
| | - Hiroyuki Kawachi
- Faculty of Bioscience, Nagahama Institute of Bio-Science and Technology, Tamura 1266, Nagahama, Shiga 526-0829 Japan
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12
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Meat Species Identification: Amplification Refractory Mutation System-Polymerase Chain Reaction–Based Assay. FOOD ANAL METHOD 2019. [DOI: 10.1007/s12161-019-01640-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
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13
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Türkanoǧlu Özçelik A, Yılmaz S, Gökbora S, İnan M. A quantitative polymerase chain reaction assay for the detection of equine (horse and donkey)-originated meat in processed bovine meat products. FOOD SCI TECHNOL INT 2018; 25:38-46. [PMID: 30149728 DOI: 10.1177/1082013218794849] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Meat is one of the most important basic foodstuffs in human nutrition. Nowadays, adulteration and authenticity are common problems for meat products. Identification of meat species is important in terms of consumer protection and prevention of adulteration. There are different methods to determine adulteration of meat and meat products. These methods are histological controls, serological tests, and quantitative polymerase chain reaction. In this study, species identification and quantification analysis of meat and meat products were done by using horse-, donkey-, and bovine-specific primers with quantitative polymerase chain reaction method. Triple meat mixtures containing horse and donkey meat ranging from 0.1 to 50% levels were prepared within a bovine mixture for using species identification and quantification analysis. The method specificity was confirmed by melting curve analysis. In conclusion, quantitative polymerase chain reaction is an easy, rapid, and reliable method for meat species identification, and with this study an applicable method was developed for the detection and quantification of equine-originated meat in bovine meat products.
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Affiliation(s)
| | - Semiramis Yılmaz
- 2 Department of Food Engineering, Faculty of Engineering, Akdeniz University, Antalya, Turkey
| | - Sevda Gökbora
- 2 Department of Food Engineering, Faculty of Engineering, Akdeniz University, Antalya, Turkey
| | - Mehmet İnan
- 1 Food Safety and Agricultural Research Center, Akdeniz University, Antalya, Turkey.,2 Department of Food Engineering, Faculty of Engineering, Akdeniz University, Antalya, Turkey
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14
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Designing a time-effective TaqMan probe-based real-time polymerase chain reaction protocol for the identification of Yersinia enterocolitica in raw pork meat. ACTA VET BRNO 2018. [DOI: 10.2754/avb201786040317] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The aim of this study was to design a time-effective method comprising a short pre-enrichment step in a non-selective broth in combination with the TaqMan probe applied in the real-time polymerase chain reaction to detectYersinia enterocoliticastrains in raw pork meat. The method enabled to detect 1 colony forming unit per 25 mg ofYersinia enterocoliticain pork meat. The specificity and reliability of the method was not diminished by the company of microflora naturally present in meat. The method was found successful to detect pathogenicYersinia enterocoliticastrains in pork meat. It is advised to be used for assessing the microbial risk and for controlling the microbial quality of meat and meat products.
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15
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Drdolová Z, Golian J, Čurlej J, Maršálková L. Verification of animal species in ham and salami by DNA microarray and Real time PCR methods. POTRAVINARSTVO 2017. [DOI: 10.5219/831] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Consumer protection and detecting of adulteration is very important and has a wide societal impact in the economic sphere. Detection of animal species in meat products and the use of combining different methods is one of the means to achieve relevant product status. The aim of this study was to reveal whether or not the products label clearly meets the content declared by producer. In our study, 29 samples of meat products such as salami and ham obtained from stores and supermarkets in Slovakia were analyzed to detect the existing animal species according to the product label the use of Chipron LCD Array Analysis System, Meat 5.0. Products in which the presence of non-declared animal species has been detected were subjected to testing by the innuDETECT PCR Real-Time Kit, repeatedly. The results showed that 20 (68.96%) samples were improperly labeled. From in total 14 tested ham samples 11 (78.57%) products exhibited non-conformity with declared composition. Tested salami samples (15) revealed 9 (60%) incorrectly labelled products. The results obtained by DNA Microarray and Real Time PCR methods were identical, and both methods should be extensively promoted for the detection of animal species in the meat and meat products.
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16
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El Sheikha AF, Mokhtar NFK, Amie C, Lamasudin DU, Isa NM, Mustafa S. Authentication technologies using DNA-based approaches for meats and halal meats determination. FOOD BIOTECHNOL 2017. [DOI: 10.1080/08905436.2017.1369886] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Aly Farag El Sheikha
- Department of Biology, McMaster University, Hamilton, Ontario, Canada
- Department of Food Science and Technology, Faculty of Agriculture, Minufiya University, Shibin El Kom, Egypt
| | - Nur Fadhilah Khairil Mokhtar
- Laboratory of Halal Products Research Institute, Halal Products Research Institute, Universiti Putra Malaysia (UPM), Selangor, Malaysia
| | - Ceesay Amie
- Department of Microbiology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia (UPM), Selangor, Malaysia
| | - Dhilia Udie Lamasudin
- Department of Cell and Molecular Biology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia (UPM), Selangor, Malaysia
| | - Nurulfiza Mat Isa
- Department of Cell and Molecular Biology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia (UPM), Selangor, Malaysia
| | - Shuhaimi Mustafa
- Laboratory of Halal Products Research Institute, Halal Products Research Institute, Universiti Putra Malaysia (UPM), Selangor, Malaysia
- Department of Microbiology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia (UPM), Selangor, Malaysia
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17
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Species identification and animal authentication in meat products: a review. JOURNAL OF FOOD MEASUREMENT AND CHARACTERIZATION 2017. [DOI: 10.1007/s11694-017-9625-z] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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18
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Song L, Xu J, Chingin K, Zhu T, Zhang Y, Tian Y, Chen H, Chen X. Rapid Identification of Meat Species by the Internal Extractive Electrospray Ionization Mass Spectrometry of Hemoglobin Selectively Captured on Functionalized Graphene Oxide. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2017; 65:7006-7011. [PMID: 28737033 DOI: 10.1021/acs.jafc.7b01715] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Hemoglobin (Hb) present in the blood and meat juice samples was selectively adsorbed by graphene oxide (GO) particles functionalized with amylopectin (AP) and was sensitively detected by direct internal extractive electrospray ionization mass spectrometry (iEESI-MS) analysis for the identification of meat type. Various samples including the whole blood samples of chicken, duck, sheep, mouse, pigeon, turtledove, and meat juice mixtures were successfully identified based on the difference in molecular composition of Hb reflected in MS. The adulteration of sheep blood with only 2% chicken blood could be detected, which demonstrated the high chemical specificity of the approach. The established method is featured by the high speed of analysis (4 min per sample, including the analyte extraction and sample loading), high sensitivity, minimal sample preparation, and low sample consumption (0.9 μL of whole blood or 300 mg of raw meat). In perspective, the reported method can be extended for the sensitive detection of trace analytes in complex matrices in broad molecular range by using the selective enrichment on functionalized graphene oxide particles followed by iEESI-MS analysis.
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Affiliation(s)
- Lili Song
- Jiangxi Key Laboratory for Mass Spectrometry and Instrumentation, East China Institute of Technology , Nanchang 330013, People's Republic of China
| | - Jiaquan Xu
- Jiangxi Key Laboratory for Mass Spectrometry and Instrumentation, East China Institute of Technology , Nanchang 330013, People's Republic of China
| | - Konstantin Chingin
- Jiangxi Key Laboratory for Mass Spectrometry and Instrumentation, East China Institute of Technology , Nanchang 330013, People's Republic of China
| | - Tenggao Zhu
- Jiangxi Key Laboratory for Mass Spectrometry and Instrumentation, East China Institute of Technology , Nanchang 330013, People's Republic of China
| | - Yue Zhang
- Research Center for Analytical Sciences, College of Sciences, Northeastern University , Shenyang 110819, People's Republic of China
| | - Yong Tian
- Jiangxi Key Laboratory for Mass Spectrometry and Instrumentation, East China Institute of Technology , Nanchang 330013, People's Republic of China
| | - Huanwen Chen
- Jiangxi Key Laboratory for Mass Spectrometry and Instrumentation, East China Institute of Technology , Nanchang 330013, People's Republic of China
| | - Xuwei Chen
- Research Center for Analytical Sciences, College of Sciences, Northeastern University , Shenyang 110819, People's Republic of China
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19
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Song KY, Hwang HJ, Kim JH. Ultra-fast DNA-based multiplex convection PCR method for meat species identification with possible on-site applications. Food Chem 2017; 229:341-346. [DOI: 10.1016/j.foodchem.2017.02.085] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2016] [Revised: 12/02/2016] [Accepted: 02/17/2017] [Indexed: 11/16/2022]
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20
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Hossain MAM, Ali ME, Sultana S, Bonny SQ, Kader MA, Rahman MA. Quantitative Tetraplex Real-Time Polymerase Chain Reaction Assay with TaqMan Probes Discriminates Cattle, Buffalo, and Porcine Materials in Food Chain. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2017; 65:3975-3985. [PMID: 28481513 DOI: 10.1021/acs.jafc.7b00730] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Cattle, buffalo, and porcine materials are widely adulterated, and their quantification might safeguard health, religious, economic, and social sanctity. Recently, conventional polymerase chain reaction (PCR) and PCR-restriction fragment length polymorphism (RFLP) assays have been documented but they are just suitable for identification, cannot quantify adulterations. We described here a quantitative tetraplex real-time PCR assay with TaqMan Probes to quantify contributions from cattle, buffalo, and porcine materials simultaneously. Amplicon-sizes were very short (106-, 90-, and 146-bp for cattle, buffalo, and porcine) because longer targets could be broken down, bringing serious ambiguity in molecular diagnostics. False negative detection was eliminated through an endogenous control (141-bp site of eukaryotic 18S rRNA). Analysis of 27 frankfurters and 27 meatballs reflected 84-115% target recovery at 0.1-10% adulterations. Finally, a test of 36 commercial products revealed 71% beef frankfurters, 100% meatballs, and 85% burgers contained buffalo adulteration, but no porcine was found in beef products.
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Affiliation(s)
- M A Motalib Hossain
- Nanotechnology and Catalysis Research Centre (NANOCAT), Institute of Graduate Studies, University of Malaya , Kuala Lumpur 50603, Malaysia
| | - Md Eaqub Ali
- Nanotechnology and Catalysis Research Centre (NANOCAT), Institute of Graduate Studies, University of Malaya , Kuala Lumpur 50603, Malaysia
- Institute of Halal Research University Malaya (IHRUM), University of Malaya , 50603 Kuala Lumpur, Malaysia
- Centre for Research in Biotechnology for Agriculture (CEBAR), University of Malaya , Kuala Lumpur 50603, Malaysia
| | - Sharmin Sultana
- Nanotechnology and Catalysis Research Centre (NANOCAT), Institute of Graduate Studies, University of Malaya , Kuala Lumpur 50603, Malaysia
| | - Sharmin Quazi Bonny
- Nanotechnology and Catalysis Research Centre (NANOCAT), Institute of Graduate Studies, University of Malaya , Kuala Lumpur 50603, Malaysia
| | - Md Abdul Kader
- School of Fisheries and Aquaculture Sciences, Universiti Malaysia Terengganu , 21030 Kuala Terengganu, Terengganu, Malaysia
| | - M Aminur Rahman
- Laboratory of Marine Biotechnology, Institute of Bioscience (IBS), Universiti Putra Malaysia , 43400 UPM Serdang, Selangor, Malaysia
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21
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Vlachos A, Arvanitoyannis IS, Tserkezou P. An Updated Review of Meat Authenticity Methods and Applications. Crit Rev Food Sci Nutr 2017; 56:1061-96. [PMID: 24915333 DOI: 10.1080/10408398.2012.691573] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Abstract
Adulteration of foods is a serious economic problem concerning most foodstuffs, and in particular meat products. Since high-priced meat demand premium prices, producers of meat-based products might be tempted to blend these products with lower cost meat. Moreover, the labeled meat contents may not be met. Both types of adulteration are difficult to detect and lead to deterioration of product quality. For the consumer, it is of outmost importance to guarantee both authenticity and compliance with product labeling. The purpose of this article is to review the state of the art of meat authenticity with analytical and immunochemical methods with the focus on the issue of geographic origin and sensory characteristics. This review is also intended to provide an overview of the various currently applied statistical analyses (multivariate analysis (MAV), such as principal component analysis, discriminant analysis, cluster analysis, etc.) and their effectiveness for meat authenticity.
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Affiliation(s)
- Antonios Vlachos
- a Department of Agriculture, Ichthyology, and Aquatic Environment, School of Agricultural Sciences, University of Thessaly , Volos , Hellas , Greece
| | - Ioannis S Arvanitoyannis
- a Department of Agriculture, Ichthyology, and Aquatic Environment, School of Agricultural Sciences, University of Thessaly , Volos , Hellas , Greece
| | - Persefoni Tserkezou
- a Department of Agriculture, Ichthyology, and Aquatic Environment, School of Agricultural Sciences, University of Thessaly , Volos , Hellas , Greece
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22
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Masiri J, Benoit L, Barrios-Lopez B, Thienes C, Meshgi M, Agapov A, Dobritsa A, Nadala C, Samadpour M. Development and validation of a rapid test system for detection of pork meat and collagen residues. Meat Sci 2016; 121:397-402. [DOI: 10.1016/j.meatsci.2016.07.006] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2015] [Revised: 07/05/2016] [Accepted: 07/10/2016] [Indexed: 11/27/2022]
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23
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Asing, Ali E, Hamid SBA, Hossain M, Ahamad MNU, Hossain SMA, Naquiah N, Zaidul ISM. Duplex real-time PCR assay using SYBR Green to detect and quantify Malayan box turtle (Cuora amboinensis) materials in meatballs, burgers, frankfurters and traditional Chinese herbal jelly powder. Food Addit Contam Part A Chem Anal Control Expo Risk Assess 2016; 33:1643-1659. [DOI: 10.1080/19440049.2016.1236403] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- Asing
- Nanotechnology and Catalysis Research Center (NANOCAT), University of Malaya, Kuala Lumpur, Malaysia
| | - Eaqub Ali
- Nanotechnology and Catalysis Research Center (NANOCAT), University of Malaya, Kuala Lumpur, Malaysia
- Centre for Research in Biotechnology for Agriculture (CEBAR), University of Malaya, Kuala Lumpur, Malaysia
| | - Sharifah Bee Abd Hamid
- Nanotechnology and Catalysis Research Center (NANOCAT), University of Malaya, Kuala Lumpur, Malaysia
| | - Motalib Hossain
- Nanotechnology and Catalysis Research Center (NANOCAT), University of Malaya, Kuala Lumpur, Malaysia
| | | | - S. M. Azad Hossain
- Nanotechnology and Catalysis Research Center (NANOCAT), University of Malaya, Kuala Lumpur, Malaysia
| | - Nina Naquiah
- Nanotechnology and Catalysis Research Center (NANOCAT), University of Malaya, Kuala Lumpur, Malaysia
| | - I. S. M. Zaidul
- Department of Pharmaceutical Technology, Faculty of Pharmacy, International Islamic University, Kuantan, Malaysia
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24
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Asing, Ali ME, Abd Hamid SB, Hossain MAM, Mustafa S, Kader MA, Zaidul ISM. Lab-on-a-Chip-Based PCR-RFLP Assay for the Detection of Malayan Box Turtle (Cuora amboinensis) in the Food Chain and Traditional Chinese Medicines. PLoS One 2016; 11:e0163436. [PMID: 27716792 PMCID: PMC5055339 DOI: 10.1371/journal.pone.0163436] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2016] [Accepted: 09/08/2016] [Indexed: 11/18/2022] Open
Abstract
The Malayan box turtle (Cuora amboinensis) (MBT) is a vulnerable and protected turtle species, but it is a lucrative item in the illegal wildlife trade because of its great appeal as an exotic food item and in traditional medicine. Although several polymerase chain reaction (PCR) assays to identify MBT by various routes have been documented, their applicability for forensic authentication remains inconclusive due to the long length of the amplicon targets, which are easily broken down by natural decomposition, environmental stresses or physiochemical treatments during food processing. To address this research gap, we developed, for the first time, a species-specific PCR-restriction fragment length polymorphism (RFLP) assay with a very short target length (120 bp) to detect MBT in the food chain; this authentication ensured better security and reliability through molecular fingerprints. The PCR-amplified product was digested with Bfa1 endonuclease, and distinctive restriction fingerprints (72, 43 and 5 bp) for MBT were found upon separation in a microfluidic chip-based automated electrophoresis system, which enhances the resolution of short oligos. The chances of any false negative identifications were eliminated through the use of a universal endogenous control for eukaryotes, and the limit of detection was 0.0001 ng DNA or 0.01% of the meat under admixed states. Finally, the optimized PCR-RFLP assay was validated for the screening of raw and processed commercial meatballs, burgers and frankfurters, which are very popular in most countries. The optimized PCR-RFLP assay was further used to screen MBT materials in 153 traditional Chinese medicines of 17 different brands and 62 of them were found MBT positive; wherein the ingredients were not declared in product labels. Overall, the novel assay demonstrated sufficient merit for use in any forensic and/or archaeological authentication of MBT, even under a state of decomposition.
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Affiliation(s)
- Asing
- Nanotechnology and Catalysis Research Center (NANOCAT), University of Malaya, Kuala Lumpur, Malaysia
| | - Md. Eaqub Ali
- Nanotechnology and Catalysis Research Center (NANOCAT), University of Malaya, Kuala Lumpur, Malaysia
- Centre for Research in Biotechnology for Agriculture (CEBAR), University of Malaya, Kuala Lumpur, Malaysia
| | - Sharifah Bee Abd Hamid
- Nanotechnology and Catalysis Research Center (NANOCAT), University of Malaya, Kuala Lumpur, Malaysia
| | - M. A. Motalib Hossain
- Nanotechnology and Catalysis Research Center (NANOCAT), University of Malaya, Kuala Lumpur, Malaysia
| | - Shuhaimi Mustafa
- Institute of Halal Products Research, University of Putra Malaysia, UPM Serdang, Selangor, Malaysia
| | - Md. Abdul Kader
- School of Aquaculture and Fisheries, University of Malaysia Terrenganu, Kuala Terrenganu, Terrenganu, Malaysia
| | - I. S. M. Zaidul
- Department of Pharmaceutical Technology, Faculty of Pharmacy, International Islamic University, Kuantan, Pahang, Malaysia
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25
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Kumar A, Kumar RR, Sharma BD, Gokulakrishnan P, Mendiratta SK, Sharma D. Identification of species origin of meat and meat products on the DNA basis: a review. Crit Rev Food Sci Nutr 2016; 55:1340-51. [PMID: 24915324 DOI: 10.1080/10408398.2012.693978] [Citation(s) in RCA: 65] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Abstract
The adulteration/substitution of meat has always been a concern for various reasons such as public health, religious factors, wholesomeness, and unhealthy competition in meat market. Consumer should be protected from these malicious practices of meat adulterations by quick, precise, and specific identification of meat animal species. Several analytical methodologies have been employed for meat speciation based on anatomical, histological, microscopic, organoleptic, chemical, electrophoretic, chromatographic, or immunological principles. However, by virtue of their inherent limitations, most of these techniques have been replaced by the recent DNA-based molecular techniques. In the last decades, several methods based on polymerase chain reaction have been proposed as useful means for identifying the species origin in meat and meat products, due to their high specificity and sensitivity, as well as rapid processing time and low cost. This review intends to provide an updated and extensive overview on the DNA-based methods for species identification in meat and meat products.
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Affiliation(s)
- Arun Kumar
- a Division of Livestock Products Technology , Indian Veterinary Research Institute , Izatnagar, Bareilly , 243122 , Uttar Pradesh , India
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26
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Fang X, Zhang C. Detection of adulterated murine components in meat products by TaqMan© real-time PCR. Food Chem 2016; 192:485-90. [DOI: 10.1016/j.foodchem.2015.07.020] [Citation(s) in RCA: 47] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2014] [Revised: 03/16/2015] [Accepted: 07/07/2015] [Indexed: 11/28/2022]
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27
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Ali ME, Asing, Hamid SBA, Razzak MA, Rashid NRA, Al Amin M, Mustafa S. A suitable method to detect potential fraud of bringing Malayan box turtle (Cuora amboinensis) meat into the food chain. Food Addit Contam Part A Chem Anal Control Expo Risk Assess 2015; 32:1223-33. [DOI: 10.1080/19440049.2015.1058535] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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28
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Kim JK, Shin SY, Moon JS, Li L, Cho SK, Kim TJ, Han NS. Isolation of dextran-hydrolyzing intestinal bacteria and characterization of their dextranolytic activities. Biopolymers 2015; 103:321-7. [DOI: 10.1002/bip.22615] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2014] [Revised: 01/08/2015] [Accepted: 01/21/2015] [Indexed: 11/11/2022]
Affiliation(s)
- Jin Kyoung Kim
- Division of Animal, Horticultural, and Food Sciences; Brain Korea 21 Center for Bio-Resource Development, Chungbuk National University; Cheongju 361-763 Republic of Korea
| | - So-Yeon Shin
- Division of Animal, Horticultural, and Food Sciences; Brain Korea 21 Center for Bio-Resource Development, Chungbuk National University; Cheongju 361-763 Republic of Korea
| | - Jin Seok Moon
- Division of Animal, Horticultural, and Food Sciences; Brain Korea 21 Center for Bio-Resource Development, Chungbuk National University; Cheongju 361-763 Republic of Korea
| | - Ling Li
- Division of Animal, Horticultural, and Food Sciences; Brain Korea 21 Center for Bio-Resource Development, Chungbuk National University; Cheongju 361-763 Republic of Korea
| | - Seung Kee Cho
- Division of Animal, Horticultural, and Food Sciences; Brain Korea 21 Center for Bio-Resource Development, Chungbuk National University; Cheongju 361-763 Republic of Korea
| | - Tae-Jip Kim
- Division of Animal, Horticultural, and Food Sciences; Brain Korea 21 Center for Bio-Resource Development, Chungbuk National University; Cheongju 361-763 Republic of Korea
| | - Nam Soo Han
- Division of Animal, Horticultural, and Food Sciences; Brain Korea 21 Center for Bio-Resource Development, Chungbuk National University; Cheongju 361-763 Republic of Korea
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29
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Nesvadbová M, Knoll A, Vašátková A. Selection of the most suitable method for the extraction of DNA from foods and feeds for species identification. ACTA UNIVERSITATIS AGRICULTURAE ET SILVICULTURAE MENDELIANAE BRUNENSIS 2014. [DOI: 10.11118/actaun201058020169] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
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30
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Soares S, Amaral JS, Oliveira MBPP, Mafra I. Quantitative detection of soybean in meat products by a TaqMan real-time PCR assay. Meat Sci 2014; 98:41-6. [PMID: 24836348 DOI: 10.1016/j.meatsci.2014.04.002] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2013] [Revised: 03/25/2014] [Accepted: 04/07/2014] [Indexed: 11/27/2022]
Abstract
In the present work, we propose a normalised real-time quantitative PCR assay to determine the addition of soybean to meat products. The method proved to be a powerful tool for the quantification of soybean protein (dry basis) in the range of 0.01% to 6%, being successfully in-house validated. Its application was effective in the analysis of several meat products, indicating 2% of non-compliance with the food allergen labelling legislation, and some inconsistencies when comparing the declared with estimated amounts of soybean. This work highlights the importance of efficient tools to assess labelling statements of meat products, avoiding fraudulent practices.
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Affiliation(s)
- Sónia Soares
- REQUIMTE, Departamento de Ciências Químicas, Faculdade de Farmácia, Universidade do Porto, Rua de Jorge Viterbo Ferreira, 228, 4050-313 Porto, Portugal
| | - Joana S Amaral
- REQUIMTE, Departamento de Ciências Químicas, Faculdade de Farmácia, Universidade do Porto, Rua de Jorge Viterbo Ferreira, 228, 4050-313 Porto, Portugal; ESTiG, Instituto Politécnico de Bragança, Campus de Sta. Apolónia, 5301-857 Bragança, Portugal.
| | - M Beatriz P P Oliveira
- REQUIMTE, Departamento de Ciências Químicas, Faculdade de Farmácia, Universidade do Porto, Rua de Jorge Viterbo Ferreira, 228, 4050-313 Porto, Portugal
| | - Isabel Mafra
- REQUIMTE, Departamento de Ciências Químicas, Faculdade de Farmácia, Universidade do Porto, Rua de Jorge Viterbo Ferreira, 228, 4050-313 Porto, Portugal.
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31
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Niwa K, Oribe A, Okumura H, Shimono M, Nagai K, Hirota T, Yasue H, Kawase M. Tag/hybridization-based sensitive detection of polymerase chain reaction products. Anal Biochem 2014; 464:12-6. [PMID: 25051253 DOI: 10.1016/j.ab.2014.07.010] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2014] [Revised: 07/10/2014] [Accepted: 07/11/2014] [Indexed: 11/18/2022]
Abstract
The polymerase chain reaction (PCR) is an important technology to amplify a single copy or a few copies of DNA segment in genomic DNAs, visualizing the segment as DNA fragment. Thus, PCR is frequently used in various examinations such as detection of bacteria and fungi in the food industry. Here, we report a simple and sensitive method for detection of PCR products using single-strand tag sequence and hybridization of the tag sequence to the complementary tag sequence immobilized on solid material (STH). The detection sensitivity was found to be at least 50 times higher than electrophoresis/ethidium bromide (EtBr) visualization for approximately a 500-bp fragment and higher than the ordinary hybridization, that is, hybridization of denatured PCR product to probe sequence immobilized on solid material.
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Affiliation(s)
- Kousuke Niwa
- Future Technology Management Center, Corporate R&D, NGK Insulators, Mizuho, Nagoya 467-8530, Japan.
| | - Akinobu Oribe
- Future Technology Management Center, Corporate R&D, NGK Insulators, Mizuho, Nagoya 467-8530, Japan
| | - Hidemasa Okumura
- Future Technology Management Center, Corporate R&D, NGK Insulators, Mizuho, Nagoya 467-8530, Japan
| | - Masahiro Shimono
- Future Technology Management Center, Corporate R&D, NGK Insulators, Mizuho, Nagoya 467-8530, Japan
| | - Kenkichi Nagai
- Future Technology Management Center, Corporate R&D, NGK Insulators, Mizuho, Nagoya 467-8530, Japan
| | - Toshikazu Hirota
- Future Technology Management Center, Corporate R&D, NGK Insulators, Mizuho, Nagoya 467-8530, Japan
| | - Hiroshi Yasue
- Tsukuba Gene Technology Laboratories, Tsuchiura, Ibaraki 300-0873, Japan
| | - Mitsuo Kawase
- Future Technology Management Center, Corporate R&D, NGK Insulators, Mizuho, Nagoya 467-8530, Japan; Graduate School of Biomedical Engineering, Tohoku University, Aoba, Sendai 980-8579, Japan
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32
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Optimization of multiplex PCR for the identification of animal species using mitochondrial genes in sausages. Eur Food Res Technol 2014. [DOI: 10.1007/s00217-014-2249-1] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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33
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Lakzadeh L, Hosseinzadeh S, Shekarforoush SS, Fazeli M. Application of PCR and SYBR Green Q Rti-PCR Assays for the Identification and Quantification of Chicken Meat Under Different Cooking Conditions. FOOD BIOTECHNOL 2013. [DOI: 10.1080/08905436.2013.811594] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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34
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Semi-nested multiplex PCR enhanced method sensitivity of species detection in further-processed meats. Food Control 2013. [DOI: 10.1016/j.foodcont.2012.11.002] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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35
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Giaretta N, Di Giuseppe AMA, Lippert M, Parente A, Di Maro A. Myoglobin as marker in meat adulteration: a UPLC method for determining the presence of pork meat in raw beef burger. Food Chem 2013; 141:1814-20. [PMID: 23870895 DOI: 10.1016/j.foodchem.2013.04.124] [Citation(s) in RCA: 55] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2013] [Revised: 04/22/2013] [Accepted: 04/24/2013] [Indexed: 11/19/2022]
Abstract
The identification of meat animal species used in raw burgers is very important with respect to economic and religious considerations. Therefore, international supervisory bodies have implemented procedures to control the employed meat species. In this paper we propose myoglobin as a powerful molecular marker to evaluate the presence of non-declared meat addition in raw beef burgers by using ultra-performance liquid chromatography (UPLC) for the separation and identification of edible animal species (beef, chicken, horse, ostrich, pig and water buffalo). Meat samples were pre-treated with sodium nitrite to transform oxymyoglobin and deoxymyoglobin to the more stable metmyoglobin. The developed method was validated, preparing mixtures with different percentages of pork and beef minced meat. The obtained results show that using myoglobin as marker, 5% (25 mg/500 mg) of pork or beef meat can be detected in premixed minced meat samples.
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36
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Mane B, Mendiratta S, Tiwari A. Beef specific polymerase chain reaction assay for authentication of meat and meat products. Food Control 2012. [DOI: 10.1016/j.foodcont.2012.05.031] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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37
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Sun W, Li G, Liu H, Zhong W, Zhang H, Bao K, Xu C, Yang Y, Wang Z. Detection of Mink (Mustela vison) DNA in Meat Products using Polymerase Chain Reaction PCR Assay. ACTA ACUST UNITED AC 2012. [DOI: 10.3923/ajava.2012.1348.1355] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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38
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Şakalar E, Abasiyanik MF, Bektik E, Tayyrov A. Effect of heat processing on DNA quantification of meat species. J Food Sci 2012; 77:N40-4. [PMID: 22900921 DOI: 10.1111/j.1750-3841.2012.02853.x] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
In this study, real-time polymerase chain reaction (PCR) was used for identifying the effects of different temperatures and times of heat treatment on the DNA of meat products. For this purpose, beef, pork, and chicken were baked at 200 °C for 10, 20, 30, 40, 50 min, and for 30 min at 30, 60, 90, 120, 150, 180, 210 °C and also cooked by boiling at 99 °C for 10, 30, 60, 90, 120, 150, 180, 210, and 240 min. The DNA was then extracted from all samples after the heat treatment. Further, a region of 374, 290, and 183-bp of mitochondrial DNA of beef, pork, and chicken, respectively, was amplified by real-time PCR. It was found that baking and boiling of the beef, pork, and chicken resulted in decreases in the detectable copy numbers of specific genes, which varied with the heating time and degree. The results indicated that species determination and quantification using real-time PCR are affected by the temperature, duration of the heat treatment, and size of the DNA fragment to be amplified.
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Affiliation(s)
- Ergün Şakalar
- Genetics and Bioengineering Dept, Fatih Univ, İstanbul, Turkey.
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39
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40
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Montowska M, Pospiech E. Is Authentication of Regional and Traditional Food Made of Meat Possible? Crit Rev Food Sci Nutr 2012; 52:475-87. [DOI: 10.1080/10408398.2010.501408] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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41
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Kesmen Z, Yetiman AE, Sahin F, Yetim H. Detection of chicken and turkey meat in meat mixtures by using real-time PCR assays. J Food Sci 2012; 77:C167-73. [PMID: 22309374 DOI: 10.1111/j.1750-3841.2011.02536.x] [Citation(s) in RCA: 62] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Abstract
In this study, TaqMan-based real-time Polymerase Chain Reaction (PCR) techniques were developed for the detection of chicken and turkey meat in raw and heat-treated meat mixtures. Primers and TaqMan probe sets were designed to amplify 86 bp and 136 bp fragments for the chicken and turkey species, respectively, on the mitochondrial NADH dehydrogenase subunit 2 gene. In the results, it was possible to detect each species at the level of 0.1 pg template DNA with the TaqMan probe technique without any cross-reactivity with nontarget species (bovine, ovine, donkey, pork, and horse) while the detection level was 1 pg template DNA using conventional PCR. The TaqMan probe assays used in this study allowed the detection of as little as 0.001% level of both species in the experimental meat mixtures, prepared by mixing chicken and turkey meat with beef at different levels (0.001% to 10%). In conclusion, TaqMan probe assays developed in this research are promising tools in the specific identification and sensitive quantification of meat species even in the case of heat-treated meat products, and suitable for a rapid, automated, and routine analysis.
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Affiliation(s)
- Zulal Kesmen
- Food Engineering Dept, Faculty of Engineering, Erciyes Univ, 38039 Kayseri, Turkey.
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42
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Girish PS, Haunshi S, Vaithiyanathan S, Rajitha R, Ramakrishna C. A rapid method for authentication of Buffalo (Bubalus bubalis) meat by Alkaline Lysis method of DNA extraction and species specific polymerase chain reaction. Journal of Food Science and Technology 2011; 50:141-6. [PMID: 24425899 DOI: 10.1007/s13197-011-0230-6] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Revised: 12/24/2010] [Accepted: 01/05/2011] [Indexed: 10/18/2022]
Abstract
Buffalo (Bubalus bubalis) meat is a major item of export from India but export of beef i.e. meat from cattle (Bos indicus) is prohibited. Also, adulteration of buffalo meat with that of beef (meat from cattle) is a common fraudulent practice because of prohibition on cow slaughter in most states of India. Food analysts require precise identification techniques to implement such regulations. In the present study, a method of DNA extraction by Alkaline lysis from meat samples and speciation of buffalo meat using species specific Polymerase Chain Reaction (PCR) has been reported. Alkaline lysis technique is a rapid method which involves triturating meat with four volumes of 0.2N NaOH, dilution of resultant liquid extract with eight volumes of 0.2N NaOH, heating the mix 75 °C for 20 min followed by neutralization with eight volumes of 0.04N Tris HCl. Entire procedure of DNA extraction takes less than 30 min and it is economical as it involves less expensive chemicals. Method was successfully applied in animal byproducts also viz., liver, heart and kidney. For authentication of buffalo meat, pair of primers was designed based on mitochondrial D loop gene nucleotide sequence. PCR amplification using the designed primers gave amplicon of size 482 bp in buffalo and no amplification was detected in closely related species viz., cattle, sheep and goat meat samples. Results of the assay were highly repetitive and reliable. An export sample referred by export regulation authorities was also analyzed by using the Alkaline lysis method of DNA extraction and species specific PCR which enabled authentication of meat within 5 h.
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Affiliation(s)
- P S Girish
- National Research Centre on Meat, Chengicherla, PB No 19, Uppal Post, Hyderabad, 500039 Andhra Pradesh India
| | - S Haunshi
- Project Directorate on Poultry, Rajendranagar, Hyderabad, 500 030 Andhra Pradesh India
| | - S Vaithiyanathan
- National Research Centre on Meat, Chengicherla, PB No 19, Uppal Post, Hyderabad, 500039 Andhra Pradesh India
| | - R Rajitha
- National Research Centre on Meat, Chengicherla, PB No 19, Uppal Post, Hyderabad, 500039 Andhra Pradesh India
| | - C Ramakrishna
- National Research Centre on Meat, Chengicherla, PB No 19, Uppal Post, Hyderabad, 500039 Andhra Pradesh India
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Rojas M, González I, Pavón M, Pegels N, Hernández P, García T, Martín R. Mitochondrial and nuclear markers for the authentication of partridge meat and the specific identification of red-legged partridge meat products by polymerase chain reaction. Poult Sci 2011; 90:211-22. [DOI: 10.3382/ps.2010-00895] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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Soares S, Mafra I, Amaral JS, Oliveira MBP. A PCR assay to detect trace amounts of soybean in meat sausages. Int J Food Sci Technol 2010. [DOI: 10.1111/j.1365-2621.2010.02421.x] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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45
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Montowska M, Pospiech E. Authenticity Determination of Meat and Meat Products on the Protein and DNA Basis. FOOD REVIEWS INTERNATIONAL 2010. [DOI: 10.1080/87559129.2010.518297] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Magdalena Montowska
- a Institute of Meat Technology, Poznań University of Life Sciences , Poznań , Poland
| | - Edward Pospiech
- a Institute of Meat Technology, Poznań University of Life Sciences , Poznań , Poland
- b Institute of Agriculture and Food Biotechnology, Meat and Fat Technology in Poznań , Poznań , Poland
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Chung ER, Chung KY. Identification of Korean Native Pork Using Breed-Specific DNA Marker of KIT Gene. Korean J Food Sci Anim Resour 2010. [DOI: 10.5851/kosfa.2010.30.3.403] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
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Ballin NZ, Vogensen FK, Karlsson AH. Species determination – Can we detect and quantify meat adulteration? Meat Sci 2009; 83:165-74. [DOI: 10.1016/j.meatsci.2009.06.003] [Citation(s) in RCA: 168] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2009] [Revised: 05/28/2009] [Accepted: 06/01/2009] [Indexed: 10/20/2022]
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50
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Fajardo V, González I, Martín I, Rojas M, Hernández PE, García T, Martín R. A LightCycler TaqMan PCR assay for quantitative detection of chamois (Rupicapra rupicapra) and pyrenean ibex (Capra pyrenaica) in experimental meat mixtures. Int J Food Sci Technol 2009. [DOI: 10.1111/j.1365-2621.2009.02020.x] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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