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Du J, Sun J, Ding Q, Shi F, Chen C, Li C, Dong B, Wang L, Kim JS, Xu L. Dual oxidative stress biomarkers co-recognition in periodontal microenvironment: A flexible and low-power consumption nanozyme sensing platform. Biosens Bioelectron 2024; 265:116688. [PMID: 39213818 DOI: 10.1016/j.bios.2024.116688] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2024] [Revised: 08/05/2024] [Accepted: 08/18/2024] [Indexed: 09/04/2024]
Abstract
Sensing platforms with high interference immunity and low power consumption are crucial for the co-detection of dual oxidative stress biomarkers and clinical diagnosis of periodontitis. Herein, we constructed a bifunctional nanozyme to identify hydrogen peroxide (H2O2) and ascorbic acid (AA) with low crosstalk at zero or low bias voltage. To target H2O2 and AA, Fe(III) meso-tetra(4-carboxyphenyl) porphine (TCPP(Fe)) and Pt nanoclusters were selected as active sites respectively, and titanium carbide nanosheets were additionally introduced as a sensitizer. Due to their highly efficient catalytic properties, self-powered detection of H2O2 without bias voltage and distinguishable AA detection at 0.45 V were successfully achieved. Density functional theory calculations further confirmed the binding sites for target molecules and elucidated the sensing mechanism. On this basis, a dual-channel screen-printed electrode was fabricated to further ensure the discriminative detection of dual biomarkers at the device level. The constructed flexible, low-power consumption sensing platform was successfully applied to raw clinical samples, effectively distinguishing between healthy individuals and patients with varying degrees of periodontitis. This work is expected to provide new insights into the design of highly specific nanozymes and low-power consumption electrochemical sensing systems, which will contribute to the accurate and convenient diagnosis of periodontitis.
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Affiliation(s)
- Juanrui Du
- Department of Oral Implantology, Jilin Provincial Key Laboratory of Sciences and Technology for Stomatology Nanoengineering, School and Hospital of Stomatology, Jilin University, Changchun, 130021, China; State Key Laboratory on Integrated Optoelectronics, College of Electronic Science and Engineering, Jilin University, Changchun, 130021, China
| | - Jiao Sun
- Department of Cell Biology, College of Basic Medical Sciences, Jilin University, Changchun, 130021, China
| | - Qihang Ding
- Department of Chemistry, Korea University, Seoul, 02841, South Korea
| | - Fangyu Shi
- Department of Oral Implantology, Jilin Provincial Key Laboratory of Sciences and Technology for Stomatology Nanoengineering, School and Hospital of Stomatology, Jilin University, Changchun, 130021, China
| | - Cong Chen
- Department of Oral Implantology, Jilin Provincial Key Laboratory of Sciences and Technology for Stomatology Nanoengineering, School and Hospital of Stomatology, Jilin University, Changchun, 130021, China
| | - Chunyan Li
- Department of Oral Implantology, Jilin Provincial Key Laboratory of Sciences and Technology for Stomatology Nanoengineering, School and Hospital of Stomatology, Jilin University, Changchun, 130021, China
| | - Biao Dong
- State Key Laboratory on Integrated Optoelectronics, College of Electronic Science and Engineering, Jilin University, Changchun, 130021, China
| | - Lin Wang
- Department of Oral Implantology, Jilin Provincial Key Laboratory of Sciences and Technology for Stomatology Nanoengineering, School and Hospital of Stomatology, Jilin University, Changchun, 130021, China.
| | - Jong Seung Kim
- Department of Chemistry, Korea University, Seoul, 02841, South Korea.
| | - Lin Xu
- State Key Laboratory on Integrated Optoelectronics, College of Electronic Science and Engineering, Jilin University, Changchun, 130021, China.
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Gravogl L, Kass D, Pyschny O, Heinemann FW, Haumann M, Katz S, Hildebrandt P, Dau H, Swain A, García-Serres R, Ray K, Munz D, Meyer K. A bis-Phenolate Carbene-Supported bis-μ-Oxo Iron(IV/IV) Complex with a [Fe IV(μ-O) 2Fe IV] Diamond Core Derived from Dioxygen Activation. J Am Chem Soc 2024; 146:28757-28769. [PMID: 39382653 DOI: 10.1021/jacs.4c07582] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/10/2024]
Abstract
The diiron(II) complex, [(OCO)Fe(MeCN)]2 (1, MeCN = acetonitrile), supported by the bis-phenolate carbene pincer ligand, 1,3-bis(3,5-di-tert-butyl-2-hydroxyphenyl)benzimidazolin-2-ylidene (OCO), was synthesized and characterized by single-crystal X-ray diffraction, 1H nuclear magnetic resonance, infrared (IR) vibrational, ultraviolet/visible/near-infrared (UV/vis/NIR) electronic absorption, 57Fe Mössbauer, X-band electron paramagnetic resonance (EPR) and SQUID magnetization measurements. Complex 1 activates dioxygen to yield the diferric, μ-oxo-bridged complex [(OCO)Fe(py)(μ-O)Fe(O(C═O)O)(py)] (2) that was isolated and fully characterized. In 2, one of the iron-carbene bonds was oxidized to give a urea motif, resulting in an O(CNHC═O)O binding site, while the other Fe(OCO) unit remained unchanged. When the reaction is performed at -80 °C, an intensively colored, purple intermediate is observed (INT, λmax = 570 nm; ε = 5600 mol L-1 cm-1). INT acts as a sluggish oxidant, reacting only with easily oxidizable substrates, such as PPh3 or 2-phenylpropionic aldehyde (2-PPA). The identity of INT can be best described as a dinuclear complex containing a closed diamond core motif [(OCO)FeIV(μ-O)2FeIV(OCO)]. This proposal is based on extensive spectroscopic [UV/vis/NIR electronic absorption, 57Fe Mössbauer, X-band EPR, resonance Raman (rRaman), X-ray absorption, and nuclear resonance vibrational (NRVS)] and computational studies. The conversion of the diiron(II) complex 1 to the oxo diiron(IV) intermediate INT is reminiscent of the O2 activation process in soluble methane monooxygenases (sMMO). Most importantly, the low reactivity of INT supports the consensus that the [FeIV(μ-O)2FeIV] diamond core in sMMO is kinetically inert and needs to open up to terminal FeIV═O cores to react with the strong C-H bonds of methane.
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Affiliation(s)
- Lisa Gravogl
- Department of Chemistry and Pharmacy, Inorganic Chemistry, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Egerlandstraße 1, 91058 Erlangen, Germany
| | - Dustin Kass
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str.2, 12489 Berlin, Germany
| | - Oliver Pyschny
- Department of Chemistry and Pharmacy, Inorganic Chemistry, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Egerlandstraße 1, 91058 Erlangen, Germany
| | - Frank W Heinemann
- Department of Chemistry and Pharmacy, Inorganic Chemistry, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Egerlandstraße 1, 91058 Erlangen, Germany
| | - Michael Haumann
- Department of Physics, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Sagie Katz
- Department of Chemistry, Technische Universität Berlin, Straße des 17. Juni 135, 10623 Berlin, Germany
| | - Peter Hildebrandt
- Department of Chemistry, Technische Universität Berlin, Straße des 17. Juni 135, 10623 Berlin, Germany
| | - Holger Dau
- Department of Physics, Freie Universität Berlin, Arnimallee 14, 14195 Berlin, Germany
| | - Abinash Swain
- Inorganic Chemistry, Coordination Chemistry, Saarland University, Campus C4.1, 66123 Saarbrücken, Germany
| | - Ricardo García-Serres
- Université Grenoble Alpes, CEA, CNRS, Laboratoire de Chimie et Biologie des Métaux, 38000 Grenoble, France
| | - Kallol Ray
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str.2, 12489 Berlin, Germany
| | - Dominik Munz
- Inorganic Chemistry, Coordination Chemistry, Saarland University, Campus C4.1, 66123 Saarbrücken, Germany
| | - Karsten Meyer
- Department of Chemistry and Pharmacy, Inorganic Chemistry, Friedrich-Alexander-Universität Erlangen-Nürnberg (FAU), Egerlandstraße 1, 91058 Erlangen, Germany
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3
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Ouyang J, Li D, Zhu L, Cai X, Liu L, Pan H, Ma A. Application and Challenge of Metalloporphyrin Sensitizers in Noninvasive Dynamic Tumor Therapy. Molecules 2024; 29:4828. [PMID: 39459197 PMCID: PMC11510167 DOI: 10.3390/molecules29204828] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2024] [Revised: 09/22/2024] [Accepted: 10/08/2024] [Indexed: 10/28/2024] Open
Abstract
Dynamic tumor therapies (mainly including photodynamic therapy (PDT) and sonodynamic therapy (SDT)) offer new approaches to cancer treatment. They are often characterized by their noninvasive nature, high selectivity, and low toxicity. Sensitizers are crucial for dynamic therapy. Developing efficient sensitizers with good biocompatibility and controllability is an important aim in dynamic therapy. Porphyrins and metalloporphyrins attract great attention due to their excellent photophysical properties and low cytotoxicity under non-light. Compared to porphyrins, metalloporphyrins show greater potential for dynamic therapy due to their enhanced photochemical and photophysical properties after metal ions coordinate with porphyrin rings. This paper reviews some metalloporphyrin-based sensitizers used in photo/sonodynamic therapy and combined therapy. In addition, the probable challenges and bottlenecks in clinical translation are also discussed.
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Affiliation(s)
- Jiacheng Ouyang
- Research Center of Nano Technology and Application Engineering, Dongguan Innovation Institute, Guangdong Medical University, Dongguan 523808, China
| | - Dan Li
- Research Center of Nano Technology and Application Engineering, Dongguan Innovation Institute, Guangdong Medical University, Dongguan 523808, China
| | - Lizhen Zhu
- Guangdong Key Laboratory of Nanomedicine, CAS-HK Joint Lab of Biomaterials, CAS Key Laboratory of Biomedical Imaging Science and System, Shenzhen Institutes of Advanced Technology (SIAT), Chinese Academy of Sciences, Shenzhen 518055, China
| | - Xiaoyuan Cai
- Research Center of Nano Technology and Application Engineering, Dongguan Innovation Institute, Guangdong Medical University, Dongguan 523808, China
| | - Lanlan Liu
- Guangdong Key Laboratory of Nanomedicine, CAS-HK Joint Lab of Biomaterials, CAS Key Laboratory of Biomedical Imaging Science and System, Shenzhen Institutes of Advanced Technology (SIAT), Chinese Academy of Sciences, Shenzhen 518055, China
| | - Hong Pan
- Guangdong Key Laboratory of Nanomedicine, CAS-HK Joint Lab of Biomaterials, CAS Key Laboratory of Biomedical Imaging Science and System, Shenzhen Institutes of Advanced Technology (SIAT), Chinese Academy of Sciences, Shenzhen 518055, China
| | - Aiqing Ma
- Research Center of Nano Technology and Application Engineering, Dongguan Innovation Institute, Guangdong Medical University, Dongguan 523808, China
- The Second Affiliated Hospital, Guangdong Medical University, Zhanjiang 523808, China
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4
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Zhang P, Lee WZ, Ye S. Insights into dioxygen binding on metal centers: an ab initio multireference electronic structure analysis. Phys Chem Chem Phys 2024; 26:25057-25068. [PMID: 39301704 DOI: 10.1039/d4cp02915a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/22/2024]
Abstract
Why does binding of dioxygen (O2) to metal centers, the initial step of O2 storage, transportation, and activation, almost inevitably induce metal-to-O2 single-electron transfer and generate superoxo (O2-˙) species, instead of genuine O02 adducts? To address this question, this study describes highly correlated wavefunction-based ab initio calculations using CASSCF/NEVPT2 (CASSCF = complete active space self-consistent field, and NEVPT2 = N-electron valence state second-order perturbation theory) approaches to explore the electronic-structure evolution of O2 association on Fe(II)(BDPP) (H2BDPP = 2,6-bis((2-(S)-diphenylhydroxylmethyl-1-pyrrolidinyl)methyl)pyridine) and Co(II)(BDPP) to produce S = 3 Fe(III)(BDPP)(O2-˙) (1) and Co(III)(BDPP)(O2-˙) (2). CASSCF/NEVPT2 calculations suggest that the processes furnishing 1 and 2 feature an avoided crossing resulting from interactions of two diabatic curves, of which one is characterized as Co(II) and Fe(II) centers interacting with a triplet O2 ligand and the other as Co(III) and Fe(III) centers bound to a superoxo ligand. In both cases, the avoided crossing induces a one-electron transfer from the divalent metal center to the incoming O2 ligand and leads to formation of trivalent metal-O2-˙ complexes. To facilitate the interpretation of complicated multireference wavefunctions, we formulated two-fragment spin eigenfunctions utilizing Clebsch-Gordan coefficients (CGCs) to rationalize computed spin populations on the metal centers and the O2 ligand and compared these results with usual valence bonding (VB) analyses. It turns out that both methods give the same results and are complementary to each other. Finally, the limitation of DFT approaches in describing complex electronic structures involving metal-ligand magnetic couplings is delineated.
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Affiliation(s)
- Peng Zhang
- State Key Laboratory of Catalysis, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Way-Zen Lee
- Department of Chemistry, National Taiwan Normal University, Taipei 11677, Taiwan
- Department of Medicinal and Applied Chemistry, Kaohsiung Medical University, Kaohsiung 807, Taiwan
| | - Shengfa Ye
- State Key Laboratory of Catalysis, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
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5
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Leone L, De Fenza M, Esposito A, Maglio O, Nastri F, Lombardi A. Peptides and metal ions: A successful marriage for developing artificial metalloproteins. J Pept Sci 2024; 30:e3606. [PMID: 38719781 DOI: 10.1002/psc.3606] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2024] [Revised: 03/27/2024] [Accepted: 03/28/2024] [Indexed: 10/12/2024]
Abstract
The mutual relationship between peptides and metal ions enables metalloproteins to have crucial roles in biological systems, including structural, sensing, electron transport, and catalytic functions. The effort to reproduce or/and enhance these roles, or even to create unprecedented functions, is the focus of protein design, the first step toward the comprehension of the complex machinery of nature. Nowadays, protein design allows the building of sophisticated scaffolds, with novel functions and exceptional stability. Recent progress in metalloprotein design has led to the building of peptides/proteins capable of orchestrating the desired functions of different metal cofactors. The structural diversity of peptides allows proper selection of first- and second-shell ligands, as well as long-range electrostatic and hydrophobic interactions, which represent precious tools for tuning metal properties. The scope of this review is to discuss the construction of metal sites in de novo designed and miniaturized scaffolds. Selected examples of mono-, di-, and multi-nuclear binding sites, from the last 20 years will be described in an effort to highlight key artificial models of catalytic or electron-transfer metalloproteins. The authors' goal is to make readers feel like guests at the marriage between peptides and metal ions while offering sources of inspiration for future architects of innovative, artificial metalloproteins.
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Affiliation(s)
- Linda Leone
- Department of Chemical Sciences, University of Naples Federico II, Naples, Italy
| | - Maria De Fenza
- Department of Chemical Sciences, University of Naples Federico II, Naples, Italy
| | - Alessandra Esposito
- Department of Chemical Sciences, University of Naples Federico II, Naples, Italy
| | - Ornella Maglio
- Department of Chemical Sciences, University of Naples Federico II, Naples, Italy
- Institute of Biostructures and Bioimaging, National Research Council, Naples, Italy
| | - Flavia Nastri
- Department of Chemical Sciences, University of Naples Federico II, Naples, Italy
| | - Angela Lombardi
- Department of Chemical Sciences, University of Naples Federico II, Naples, Italy
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6
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Sarkar S, Wu CQ, Manna S, Samanta D, Chen PPY, Rath SP. Probing substrate binding inside a paramagnetic cavity: a NMR spectroscopy toolbox for combined experimental and theoretical investigation. Chem Sci 2024:d4sc05432f. [PMID: 39364070 PMCID: PMC11446338 DOI: 10.1039/d4sc05432f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2024] [Accepted: 09/18/2024] [Indexed: 10/05/2024] Open
Abstract
Protein cavities often rely on the paramagnetic metal present in their active site in order to catalyse various chemical transformations in biology. The selective detection and identification of the substrate is of fundamental importance in environmental monitoring and biological studies. Herein, a covalently linked Fe(iii)porphyrin dimer-based paramagnetic sensory cavity has been devised for the accurate detection and simultaneous identification of phenol (substrate) binding within the cavity that provides a unique spectroscopic signature with valuable structural and environmental information. These substrates within the paramagnetic cavity leave the fingerprints of the specific binding modes (exo vs. endo) which are well distinguished with the help of various spectroscopic studies viz. UV-vis, 1H, and 19F NMR and in their respective crystal structures also. The theoretical 19F NMR analysis plays a pivotal role in replicating the observed NMR trends with large chemical shifts of the phenolato species which in turn helps in deciphering the selective binding modes of the phenols and thereby recognizing the chemical environment within the cavity. These findings will help develop an excellent diagnostic tool for in situ monitoring of subtle conformational changes and transient interactions.
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Affiliation(s)
- Sabyasachi Sarkar
- Department of Chemistry, Indian Institute of Technology Kanpur Kanpur-208016 India
| | - Chang-Quan Wu
- Department of Chemistry, National Chung Hsing University 145 Xingda Rd. South Dist. Taichung City 402 Taiwan
| | - Santanu Manna
- Department of Chemistry, Indian Institute of Technology Kanpur Kanpur-208016 India
| | - Deepannita Samanta
- Department of Chemistry, Indian Institute of Technology Kanpur Kanpur-208016 India
| | - Peter P-Y Chen
- Department of Chemistry, National Chung Hsing University 145 Xingda Rd. South Dist. Taichung City 402 Taiwan
| | - Sankar Prasad Rath
- Department of Chemistry, Indian Institute of Technology Kanpur Kanpur-208016 India
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7
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Liu Y, Chen Y, Zhao YJ, Zhang GQ, Zheng Y, Yu P, Chen P, Jia ZJ. Iron-Catalyzed Primary Amination of C(sp 3)-H Bonds. J Am Chem Soc 2024; 146:24863-24870. [PMID: 39192496 DOI: 10.1021/jacs.4c05407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/29/2024]
Abstract
Primary amines are privileged molecules in drug development. Yet, there is a noticeable scarcity of methods for directly introducing a primary amine group into the ubiquitous C(sp3)-H bonds within organic compounds. Here, we report an iron-based catalytic system that enables direct primary amination of C(sp3)-H bonds under aqueous conditions and air. Various types of C(sp3)-H bonds, including benzylic, allylic, and aliphatic ones, can be readily functionalized with high selectivity and efficiency. The broad utility of this method has been further verified by late-stage amination of 11 complex bioactive molecules. Mechanistic studies unveil a protonated iron-nitrene complex as the key intermediate for the C-H bond activation. This work extends the toolbox for direct C(sp3)-H functionalizations, opening up new opportunities for late-stage modifications of organic molecules.
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Affiliation(s)
- Ye Liu
- Department of Biopharmaceutics, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
- Key Laboratory of Birth Defects and Related Diseases of Women and Children, Children's Medicine Key Laboratory of Sichuan Province, Department of Pharmacy/Evidence-Based Pharmacy Center, West China Second University Hospital, Sichuan University, Chengdu 610041, China
| | - Yu Chen
- Department of Chemistry and Shenzhen Grubbs Institute, Guangdong Provincial Key Laboratory of Catalysis, Southern University of Science and Technology, Shenzhen 518055, China
| | - Yu-Jie Zhao
- Department of Biopharmaceutics, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
- Key Laboratory of Birth Defects and Related Diseases of Women and Children, Children's Medicine Key Laboratory of Sichuan Province, Department of Pharmacy/Evidence-Based Pharmacy Center, West China Second University Hospital, Sichuan University, Chengdu 610041, China
| | - Guo-Qing Zhang
- Department of Biopharmaceutics, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
- Key Laboratory of Birth Defects and Related Diseases of Women and Children, Children's Medicine Key Laboratory of Sichuan Province, Department of Pharmacy/Evidence-Based Pharmacy Center, West China Second University Hospital, Sichuan University, Chengdu 610041, China
| | - Yongxiang Zheng
- Department of Biopharmaceutics, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
- Key Laboratory of Birth Defects and Related Diseases of Women and Children, Children's Medicine Key Laboratory of Sichuan Province, Department of Pharmacy/Evidence-Based Pharmacy Center, West China Second University Hospital, Sichuan University, Chengdu 610041, China
| | - Peiyuan Yu
- Department of Chemistry and Shenzhen Grubbs Institute, Guangdong Provincial Key Laboratory of Catalysis, Southern University of Science and Technology, Shenzhen 518055, China
| | - Peng Chen
- Department of Biopharmaceutics, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
- Key Laboratory of Birth Defects and Related Diseases of Women and Children, Children's Medicine Key Laboratory of Sichuan Province, Department of Pharmacy/Evidence-Based Pharmacy Center, West China Second University Hospital, Sichuan University, Chengdu 610041, China
| | - Zhi-Jun Jia
- Department of Biopharmaceutics, West China School of Pharmacy, Sichuan University, Chengdu 610041, China
- Key Laboratory of Birth Defects and Related Diseases of Women and Children, Children's Medicine Key Laboratory of Sichuan Province, Department of Pharmacy/Evidence-Based Pharmacy Center, West China Second University Hospital, Sichuan University, Chengdu 610041, China
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Wang X, He J, Wang YN, Zhao Z, Jiang K, Yang W, Zhang T, Jia S, Zhong K, Niu L, Lan Y. Strategies and Mechanisms of First-Row Transition Metal-Regulated Radical C-H Functionalization. Chem Rev 2024; 124:10192-10280. [PMID: 39115179 DOI: 10.1021/acs.chemrev.4c00188] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/12/2024]
Abstract
Radical C-H functionalization represents a useful means of streamlining synthetic routes by avoiding substrate preactivation and allowing access to target molecules in fewer steps. The first-row transition metals (Ti, V, Cr, Mn, Fe, Co, Ni, and Cu) are Earth-abundant and can be employed to regulate radical C-H functionalization. The use of such metals is desirable because of the diverse interaction modes between first-row transition metal complexes and radical species including radical addition to the metal center, radical addition to the ligand of metal complexes, radical substitution of the metal complexes, single-electron transfer between radicals and metal complexes, hydrogen atom transfer between radicals and metal complexes, and noncovalent interaction between the radicals and metal complexes. Such interactions could improve the reactivity, diversity, and selectivity of radical transformations to allow for more challenging radical C-H functionalization reactions. This review examines the achievements in this promising area over the past decade, with a focus on the state-of-the-art while also discussing existing limitations and the enormous potential of high-value radical C-H functionalization regulated by these metals. The aim is to provide the reader with a detailed account of the strategies and mechanisms associated with such functionalization.
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Affiliation(s)
- Xinghua Wang
- College of Chemistry, and Pingyuan Laboratory, Zhengzhou University, Zhengzhou, Henan 450001, P. R. China
| | - Jing He
- College of Chemistry, and Pingyuan Laboratory, Zhengzhou University, Zhengzhou, Henan 450001, P. R. China
| | - Ya-Nan Wang
- School of Chemistry and Chemical Engineering, Chongqing Key Laboratory of Chemical Theory and Mechanism, Chongqing University, Chongqing 401331, P. R. China
| | - Zhenyan Zhao
- College of Chemistry, and Pingyuan Laboratory, Zhengzhou University, Zhengzhou, Henan 450001, P. R. China
| | - Kui Jiang
- College of Chemistry, and Pingyuan Laboratory, Zhengzhou University, Zhengzhou, Henan 450001, P. R. China
| | - Wei Yang
- College of Chemistry, and Pingyuan Laboratory, Zhengzhou University, Zhengzhou, Henan 450001, P. R. China
| | - Tao Zhang
- Institute of Intelligent Innovation, Henan Academy of Sciences, Zhengzhou, Henan 451162, P. R. China
| | - Shiqi Jia
- College of Chemistry, and Pingyuan Laboratory, Zhengzhou University, Zhengzhou, Henan 450001, P. R. China
| | - Kangbao Zhong
- State Key Laboratory of Antiviral Drugs, Pingyuan Laboratory, Henan Normal University, Xinxiang, Henan 453007, P. R. China
| | - Linbin Niu
- College of Chemistry, and Pingyuan Laboratory, Zhengzhou University, Zhengzhou, Henan 450001, P. R. China
- State Key Laboratory of Antiviral Drugs, Pingyuan Laboratory, Henan Normal University, Xinxiang, Henan 453007, P. R. China
| | - Yu Lan
- College of Chemistry, and Pingyuan Laboratory, Zhengzhou University, Zhengzhou, Henan 450001, P. R. China
- School of Chemistry and Chemical Engineering, Chongqing Key Laboratory of Chemical Theory and Mechanism, Chongqing University, Chongqing 401331, P. R. China
- State Key Laboratory of Antiviral Drugs, Pingyuan Laboratory, Henan Normal University, Xinxiang, Henan 453007, P. R. China
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9
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Ahmed H, Ghosh B, Breitenlechner S, Feßner M, Merten C, Bach T. Intermolecular Enantioselective Amination Reactions Mediated by Visible Light and a Chiral Iron Porphyrin Complex. Angew Chem Int Ed Engl 2024; 63:e202407003. [PMID: 38695376 DOI: 10.1002/anie.202407003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2024] [Indexed: 06/15/2024]
Abstract
In the presence of 1 mol % of a chiral iron porphyrin catalyst, various 3-arylmethyl-substituted 2-quinolones and 2-pyridones underwent an enantioselective amination reaction (20 examples; 93-99 % ee). The substrates were used as the limiting reagents, and fluorinated aryl azides (1.5 equivalents) served as nitrene precursors. The reaction is triggered by visible light which allows a facile dediazotation at ambient temperature. The selectivity of the reaction is governed by a two-point hydrogen bond interaction between the ligand of the iron catalyst and the substrate. Hydrogen bonding directs the amination to a specific hydrogen atom within the substrate that is displaced by the nitrogen substituent either in a concerted fashion or by a rebound mechanism.
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Affiliation(s)
- Hussayn Ahmed
- Technische Universität München, School of Natural Sciences, Department of Chemistry and Catalysis Research Center, Lichtenbergstraße 4, 85747, Garching, Germany
| | - Biki Ghosh
- Technische Universität München, School of Natural Sciences, Department of Chemistry and Catalysis Research Center, Lichtenbergstraße 4, 85747, Garching, Germany
| | - Stefan Breitenlechner
- Technische Universität München, School of Natural Sciences, Department of Chemistry and Catalysis Research Center, Lichtenbergstraße 4, 85747, Garching, Germany
| | - Malte Feßner
- Ruhr-Universität Bochum, Faculty for Chemistry and Biochemistry, Universitätsstraße 150, D-44801, Bochum
| | - Christian Merten
- Ruhr-Universität Bochum, Faculty for Chemistry and Biochemistry, Universitätsstraße 150, D-44801, Bochum
| | - Thorsten Bach
- Technische Universität München, School of Natural Sciences, Department of Chemistry and Catalysis Research Center, Lichtenbergstraße 4, 85747, Garching, Germany
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10
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Menezes L, Sampaio RMSN, Meurer L, Szpoganicz B, Cervo R, Cargnelutti R, Wang L, Yang J, Prabhakar R, Fernandes C, Horn A. A Multipurpose Metallophore and Its Copper Complexes with Diverse Catalytic Antioxidant Properties to Deal with Metal and Oxidative Stress Disorders: A Combined Experimental, Theoretical, and In Vitro Study. Inorg Chem 2024; 63:14827-14850. [PMID: 39078252 PMCID: PMC11323273 DOI: 10.1021/acs.inorgchem.4c00232] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2024] [Revised: 07/15/2024] [Accepted: 07/17/2024] [Indexed: 07/31/2024]
Abstract
We report the discovery that the molecule 1-(pyridin-2-ylmethylamino)propan-2-ol (HL) can reduce oxidative stress in neuronal C6 glioma cells exposed to reactive oxygen species (O2-•, H2O2, and •OH) and metal (Cu+) stress conditions. Furthermore, its association with Cu2+ generates [Cu(HL)Cl2] (1) and [Cu(HL)2](ClO4)2 (2) complexes that also exhibit antioxidant properties. Potentiometric titration data show that HL can coordinate to Cu2+ in 1:1 and 1:2 Cu2+:ligand ratios, which was confirmed by monocrystal X-ray studies. The subsequent ultraviolet-visible, electrospray ionization mass spectrometry, and electron paramagnetic resonance experiments show that they can decompose a variety of reactive oxygen species (ROS). Kinetic studies revealed that 1 and 2 mimic the superoxide dismutase and catalase activities. Complex 1 promotes the fastest decomposition of H2O2 (kobs = 2.32 × 107 M-1 s-1), efficiently dismutases the superoxide anion (kcat = 3.08 × 107 M-1 s-1), and scavenges the hydroxyl radical (RSA50 = 25.7 × 10-6 M). Density functional theory calculations support the formation of dinuclear Cu-peroxide and mononuclear Cu-superoxide species in the reactions of [Cu(HL)Cl2] with H2O2 and O2•-, respectively. Furthermore, both 1 and 2 also reduce the oxidative stress of neuronal glioma C6 cells exposed to different ROS, including O2•- and •OH.
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Affiliation(s)
- Lucas
B. Menezes
- Departamento
de Química, Universidade Federal
de Santa Catarina, 88040-900 Florianópolis, SC, Brazil
| | - Raquel M. S. N. Sampaio
- Laboratório
de Ciências Químicas, Universidade
Estadual do Norte Fluminense Darcy Ribeiro, 28013-602 Campos dos Goytacazes, RJ, Brazil
| | - Lino Meurer
- Departamento
de Química, Universidade Federal
de Santa Catarina, 88040-900 Florianópolis, SC, Brazil
| | - Bruno Szpoganicz
- Departamento
de Química, Universidade Federal
de Santa Catarina, 88040-900 Florianópolis, SC, Brazil
| | - Rodrigo Cervo
- Departamento
de Química, Universidade Federal
de Santa Maria, 97105-900 Santa Maria, RS, Brazil
| | - Roberta Cargnelutti
- Departamento
de Química, Universidade Federal
de Santa Maria, 97105-900 Santa Maria, RS, Brazil
| | - Lukun Wang
- Department
of Chemistry, University of Miami, Coral Gables, Florida 33146, United States
| | - Jiawen Yang
- Department
of Chemistry, University of Miami, Coral Gables, Florida 33146, United States
| | - Rajeev Prabhakar
- Department
of Chemistry, University of Miami, Coral Gables, Florida 33146, United States
| | - Christiane Fernandes
- Departamento
de Química, Universidade Federal
de Santa Catarina, 88040-900 Florianópolis, SC, Brazil
| | - Adolfo Horn
- Departamento
de Química, Universidade Federal
de Santa Catarina, 88040-900 Florianópolis, SC, Brazil
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11
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Otlyotov AA, Moshchenkov AD, Minenkov Y. Ni, Cu, Zn, Pd, Ag and Cd Tetraphenylporphyrin Ab Initio Thermochemistry: Enthalpy of Formation of ZnTPP Revisited. Inorg Chem 2024; 63:10230-10239. [PMID: 38780084 DOI: 10.1021/acs.inorgchem.4c00662] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/25/2024]
Abstract
Groups 10-12 metalloporphyrins have been recognized for their numerous properties essential for the development of new sensing materials. In this work, accurate gas-phase enthalpies of formation, ΔfHm0(g,298.15), are predicted for the series of Ni, Cu, Zn, Pd, Ag, and Cd tetraphenylporphyrins (MTPPs) on the basis of the reaction-based Feller-Peterson-Dixon approach and high-level ab initio DLPNO-CCSD(T) calculations. Our recently developed automatic generator of the balanced chemical reactions was employed to reduce the bias of the theoretical ΔfHm0(g,298.15) toward a particular reaction. Theoretical ΔfHm0(g,298.15) for ZnTPP (227.0 ± 3.4 kcal mol-1) does not support the previously reported experimental value of 132 ± 2 kcal mol-1. The origin of the discrepancy probably lies in the experimental solid-state ΔfHm0(ZnTPP, cr,298.15) as it stems from our theoretical evaluations of the ΔfHm0(cr,298.15) values for the entire set of transition metal TPP complexes. The large discrepancy between experiment and theory also holds when different DFT functionals (ωB97M-V, PBE0-D4, and B3LYP-D4) paired with quadruple-ζ quality basis sets are used for the theoretical calculations. Experimental revisiting of the solid-state enthalpy of formation of ZnTPP and analogue measurements for other transition metal TPPs are needed to resolve the observed discrepancy. Based on the predicted enthalpies of formation of MTPPs, the relative energies of the metal-ligand bonding are evaluated and the trends are compared to those for the complexes of the unsubstituted porphyrin with the same set of metals derived in [Can. J. Chem., 2009, 87, 1063]. According to both studies, Pd complexes exhibit the strongest bonding, while the Cd species are the least stable metallocomplexes within the considered series.
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Affiliation(s)
- Arseniy A Otlyotov
- N. N. Semenov Federal Research Center for Chemical Physics RAS, Kosygina Street 4, 119991 Moscow, Russian Federation
| | - Andrey D Moshchenkov
- N. N. Semenov Federal Research Center for Chemical Physics RAS, Kosygina Street 4, 119991 Moscow, Russian Federation
| | - Yury Minenkov
- N. N. Semenov Federal Research Center for Chemical Physics RAS, Kosygina Street 4, 119991 Moscow, Russian Federation
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12
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Thomas J, Mokkawes T, Senft L, Dey A, Gordon JB, Ivanovic-Burmazovic I, de Visser SP, Goldberg DP. Axial Ligation Impedes Proton-Coupled Electron-Transfer Reactivity of a Synthetic Compound-I Analogue. J Am Chem Soc 2024; 146:12338-12354. [PMID: 38669456 PMCID: PMC11305010 DOI: 10.1021/jacs.3c08950] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/28/2024]
Abstract
The nature of the axial ligand in high-valent iron-oxo heme enzyme intermediates and related synthetic catalysts is a critical structural element for controlling proton-coupled electron-transfer (PCET) reactivity of these species. Herein, we describe the generation and characterization of three new 6-coordinate, iron(IV)-oxo porphyrinoid-π-cation-radical complexes and report their PCET reactivity together with a previously published 5-coordinate analogue, FeIV(O)(TBP8Cz+•) (TBP8Cz = octakis(p-tert-butylphenyl)corrolazinato3-) (2) (Cho, K. A high-valent iron-oxo corrolazine activates C-H bonds via hydrogen-atom transfer. J. Am. Chem. Soc. 2012, 134, 7392-7399). The new complexes FeIV(O)(TBP8Cz+•)(L) (L = 1-methyl imidazole (1-MeIm) (4a), 4-dimethylaminopyridine (DMAP) (4b), cyanide (CN-)(4c)) can be generated from either oxidation of the ferric precursors or by addition of L to the Compound-I (Cpd-I) analogue at low temperatures. These complexes were characterized by UV-vis, electron paramagnetic resonance (EPR), and Mössbauer spectroscopies, and cryospray ionization mass spectrometry (CSI-MS). Kinetic studies using 4-OMe-TEMPOH as a test substrate indicate that coordination of a sixth axial ligand dramatically lowers the PCET reactivity of the Cpd-I analogue (rates up to 7000 times slower). Extensive density functional theory (DFT) calculations together with the experimental data show that the trend in reactivity with the axial ligands does not correlate with the thermodynamic driving force for these reactions or the calculated strengths of the O-H bonds being formed in the FeIV(O-H) products, pointing to non-Bell-Evans-Polanyi behavior. However, the PCET reactivity does follow a trend with the bracketed reduction potential of Cpd-I analogues and calculated electron affinities. The combined data suggest a concerted mechanism (a concerted proton electron transfer (CPET)) and an asynchronous movement of the electron/proton pair in the transition state.
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Affiliation(s)
- Jithin Thomas
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
| | - Thirakorn Mokkawes
- The Manchester Institute of Biotechnology and Department of Chemical Engineering, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
| | - Laura Senft
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstr., 5-13, Haus D, 81377 München, Germany
| | - Aniruddha Dey
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
| | - Jesse B Gordon
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
| | - Ivana Ivanovic-Burmazovic
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstr., 5-13, Haus D, 81377 München, Germany
| | - Sam P de Visser
- The Manchester Institute of Biotechnology and Department of Chemical Engineering, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
| | - David P Goldberg
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
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13
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Singh P, Massie AA, Denler MC, Lee Y, Mayfield JR, Lomax MJA, Singh R, Nordlander E, Jackson TA. C-H Bond Oxidation by Mn IV-Oxo Complexes: Hydrogen-Atom Tunneling and Multistate Reactivity. Inorg Chem 2024; 63:7754-7769. [PMID: 38625043 DOI: 10.1021/acs.inorgchem.4c00186] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/17/2024]
Abstract
The reactivity of six MnIV-oxo complexes in C-H bond oxidation has been examined using a combination of kinetic experiments and computational methods. Variable-temperature studies of the oxidation of 9,10-dihydroanthracene (DHA) and ethylbenzene by these MnIV-oxo complexes yielded activation parameters suitable for evaluating electronic structure computations. Complementary kinetic experiments of the oxidation of deuterated DHA provided evidence for hydrogen-atom tunneling in C-H bond oxidation for all MnIV-oxo complexes. These results are in accordance with the Bell model, where tunneling occurs near the top of the transition-state barrier. Density functional theory (DFT) and DLPNO-CCSD(T1) computations were performed for three of the six MnIV-oxo complexes to probe a previously predicted multistate reactivity model. The DFT computations predicted a thermal crossing from the 4B1 ground state to a 4E state along the C-H bond oxidation reaction coordinate. DLPNO-CCSD(T1) calculations further confirm that the 4E transition state offers a lower energy barrier, reinforcing the multistate reactivity model for these complexes. We discuss how this multistate model can be reconciled with recent computations that revealed that the kinetics of C-H bond oxidation by this set of MnIV-oxo complexes can be well-predicted on the basis of the thermodynamic driving force for these reactions.
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Affiliation(s)
- Priya Singh
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, Kansas 66045, United States
| | - Allyssa A Massie
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, Kansas 66045, United States
| | - Melissa C Denler
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, Kansas 66045, United States
| | - Yuri Lee
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, Kansas 66045, United States
| | - Jaycee R Mayfield
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, Kansas 66045, United States
| | - Markell J A Lomax
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, Kansas 66045, United States
| | - Reena Singh
- Lund University, Chemical Physics, Department of Chemistry, P.O. Box 124, SE-221 00 Lund, Sweden
| | - Ebbe Nordlander
- Lund University, Chemical Physics, Department of Chemistry, P.O. Box 124, SE-221 00 Lund, Sweden
| | - Timothy A Jackson
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, Kansas 66045, United States
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14
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Wang F, Zhong ZB, Jia RX, Xing K, Cao R, Bai F, Duan PC. Three Oxidation States of Cobalt(I/II/III) Complexes by Thiaporphyrin. Inorg Chem 2024; 63:7233-7240. [PMID: 38588385 DOI: 10.1021/acs.inorgchem.3c04491] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/10/2024]
Abstract
Reaction of tetraphenyl-21-thiaporphyrin (HSTPP) with cobalt salt yields a pentacoordinated high-spin 3/2 [CoIICl(STTP)] (1). Through ion exchange, a roughly square-planar-geometry low-spin 1/2 CoIISTTP(BArF24) (2) complex was isolated. These two paramagnetic precursors were examined by single X-ray diffraction, nuclear magnetic resonance, electron paramagnetic resonance, superconducting quantum interference device, and density functional theory calculations. These two allowed the development of one electron reduction and oxidation to give [CoI(STTP)] (3), [CoIII(STTP)Cl(CH3CN)](BF4) (4), and [CoIII(STTP)Cl2] (5). The products of the chemical redox reactions were isolated and fully characterized. In addition, the reactivity of [CoIICl(STTP)] (1) was examined by azide (N3), cyanate (OCN), and thiocyanate (SCN) and featured a preferential N-coordination to the cobalt metal.
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Affiliation(s)
- Fang Wang
- Key Laboratory for Special Functional Materials of Ministry of Education, National and Local Joint Engineering Research Center for High-Efficiency Display and Lighting Technology, School of Materials Science and Engineering, Henan University, Kaifeng 475004, China
| | - Zi-Bin Zhong
- Key Laboratory for Special Functional Materials of Ministry of Education, National and Local Joint Engineering Research Center for High-Efficiency Display and Lighting Technology, School of Materials Science and Engineering, Henan University, Kaifeng 475004, China
| | - Ri-Xin Jia
- Key Laboratory for Special Functional Materials of Ministry of Education, National and Local Joint Engineering Research Center for High-Efficiency Display and Lighting Technology, School of Materials Science and Engineering, Henan University, Kaifeng 475004, China
| | - Kang Xing
- Key Laboratory for Special Functional Materials of Ministry of Education, National and Local Joint Engineering Research Center for High-Efficiency Display and Lighting Technology, School of Materials Science and Engineering, Henan University, Kaifeng 475004, China
| | - Ronghui Cao
- College of Chemistry and Chemical Engineering, Luoyang Normal University, Henan Province Function-Oriented Porous Materials Key Laboratory, Luoyang 471934, China
| | - Feng Bai
- Key Laboratory for Special Functional Materials of Ministry of Education, National and Local Joint Engineering Research Center for High-Efficiency Display and Lighting Technology, School of Materials Science and Engineering, Henan University, Kaifeng 475004, China
| | - Peng-Cheng Duan
- Key Laboratory for Special Functional Materials of Ministry of Education, National and Local Joint Engineering Research Center for High-Efficiency Display and Lighting Technology, School of Materials Science and Engineering, Henan University, Kaifeng 475004, China
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15
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Satpathy JK, Yadav R, Bagha UK, Kumar D, Sastri CV, de Visser SP. Enhanced Reactivity through Equatorial Sulfur Coordination in Nonheme Iron(IV)-Oxo Complexes: Insights from Experiment and Theory. Inorg Chem 2024; 63:6752-6766. [PMID: 38551622 DOI: 10.1021/acs.inorgchem.4c00070] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/16/2024]
Abstract
Sulfur ligation in metalloenzymes often gives the active site unique properties, whether it is the axial cysteinate ligand in the cytochrome P450s or the equatorial sulfur/thiol ligation in nonheme iron enzymes. To understand sulfur ligation to iron complexes and how it affects the structural, spectroscopic, and intrinsic properties of the active species and the catalysis of substrates, we pursued a systematic study and compared sulfur with amine-ligated iron(IV)-oxo complexes. We synthesized and characterized a biomimetic N4S-ligated iron(IV)-oxo complex and compared the obtained results with an analogous N5-ligated iron(IV)-oxo complex. Our work shows that the amine for sulfur replacement in the equatorial ligand framework leads to a rate enhancement for oxygen atom and hydrogen atom transfer reactions. Moreover, the sulfur-ligated iron(IV)-oxo complex reacts through a different reaction mechanism as compared to the N5-ligated iron(IV)-oxo complex, where the former reacts through hydride transfer with the latter reacting via radical pathways. We show that the reactivity differences are caused by a dramatic change in redox potential between the two complexes. Our studies highlight the importance of implementing a sulfur ligand into the equatorial ligand framework of nonheme iron(IV)-oxo complexes and how it affects the physicochemical properties of the oxidant and its reactivity.
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Affiliation(s)
- Jagnyesh K Satpathy
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
| | - Rolly Yadav
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
| | - Umesh K Bagha
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
| | - Devesh Kumar
- Department of Applied Physics, Babasaheb Bhimrao Ambedkar University, School for Physical Sciences, Vidya Vihar, Rae Bareilly Road, Lucknow 226025, UP, India
| | - Chivukula V Sastri
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
| | - Sam P de Visser
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
- The Manchester Institute of Biotechnology and Department of Chemical Engineering, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
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16
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Tao Y, Fan S, Li X, Yang J, Wang J, Chen G. Interfacial coupling effect promotes selective electrocatalytic oxidation of 5-hydroxymethylfurfural into the value-added products under neutral conditions. J Colloid Interface Sci 2024; 654:731-739. [PMID: 37866045 DOI: 10.1016/j.jcis.2023.10.042] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2023] [Revised: 10/02/2023] [Accepted: 10/10/2023] [Indexed: 10/24/2023]
Abstract
Owing to the sluggish reaction kinetics, it is a promising yet challenging task to achieve the adequate electricity-driven catalytic oxidation of biomass-derived 5-hydroxymethylfurfural (HMF) in neutral conditions. Herein, we have prepared an elelctrocatalyst with interfacial coupling effect through in-situ growth of Cu phthalocyanine (CuPc) on Co3O4 spinel (Co3O4/CuPc), which constructs an effective electrocatalytic system of HMF oxidation with overall oxidation value-added products yield and total Faraday efficiency up to 80% and 70%, respectively. The interfacial coupling effect between CuPc and Co3O4 spinel improve catalytic activity by effectively boosting the interfacial charge transfer and reducing the formation energy of key *C6H3O4 in the catalytic pathway according to the in situ Raman spectroscopy and DFT simulation. This work illustrates the significance of interfacial coupling effect for developing highly efficient electrocatalysts applied for neutral system of biomass oxidation.
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Affiliation(s)
- Yiyuan Tao
- State Key Laboratory of Fine Chemicals, Key Laboratory of Industrial Ecology and Environmental Engineering (MOE), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Shiying Fan
- State Key Laboratory of Fine Chemicals, Key Laboratory of Industrial Ecology and Environmental Engineering (MOE), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China.
| | - Xinyong Li
- State Key Laboratory of Fine Chemicals, Key Laboratory of Industrial Ecology and Environmental Engineering (MOE), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China.
| | - Jing Yang
- State Key Laboratory of Fine Chemicals, Key Laboratory of Industrial Ecology and Environmental Engineering (MOE), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Jingang Wang
- State Key Laboratory of Fine Chemicals, Key Laboratory of Industrial Ecology and Environmental Engineering (MOE), School of Environmental Science and Technology, Dalian University of Technology, Dalian 116024, China
| | - Guohua Chen
- School of Energy and Environment, City University of Hong Kong, Kowloon Tong, Hong Kong, China
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17
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Devi T, Dutta K, Deutscher J, Mebs S, Kuhlmann U, Haumann M, Cula B, Dau H, Hildebrandt P, Ray K. A high-spin alkylperoxo-iron(iii) complex with cis-anionic ligands: implications for the superoxide reductase mechanism. Chem Sci 2024; 15:528-533. [PMID: 38179538 PMCID: PMC10762717 DOI: 10.1039/d3sc05603a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Accepted: 12/05/2023] [Indexed: 01/06/2024] Open
Abstract
The N3O macrocycle of the 12-TMCO ligand stabilizes a high spin (S = 5/2) [FeIII(12-TMCO)(OOtBu)Cl]+ (3-Cl) species in the reaction of [FeII(12-TMCO)(OTf)2] (1-(OTf)2) with tert-butylhydroperoxide (tBuOOH) in the presence of tetraethylammonium chloride (NEt4Cl) in acetonitrile at -20 °C. In the absence of NEt4Cl the oxo-iron(iv) complex 2 [FeIV(12-TMCO)(O)(CH3CN)]2+ is formed, which can be further converted to 3-Cl by adding NEt4Cl and tBuOOH. The role of the cis-chloride ligand in the stabilization of the FeIII-OOtBu moiety can be extended to other anions including the thiolate ligand relevant to the enzyme superoxide reductase (SOR). The present study underlines the importance of subtle electronic changes and secondary interactions in the stability of the biologically relevant metal-dioxygen intermediates. It also provides some rationale for the dramatically different outcomes of the chemistry of iron(iii)peroxy intermediates formed in the catalytic cycles of SOR (Fe-O cleavage) and cytochrome P450 (O-O bond lysis) in similar N4S coordination environments.
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Affiliation(s)
- Tarali Devi
- Institut für Chemie, Humboldt-Universitat zu Berlin Brook-Taylor-Straße 2 12489 Berlin Germany
- Department of Inorganic and Physical Chemistry, Indian Institute of Science Bangalore Karnataka-560012 India
| | - Kuheli Dutta
- Institut für Chemie, Humboldt-Universitat zu Berlin Brook-Taylor-Straße 2 12489 Berlin Germany
| | - Jennifer Deutscher
- Institut für Chemie, Humboldt-Universitat zu Berlin Brook-Taylor-Straße 2 12489 Berlin Germany
| | - Stefan Mebs
- Department of Physics, Freie Universität Berlin Arnimallee 14 14195 Berlin Germany
| | - Uwe Kuhlmann
- Institut für Chemie, Technische Universität Berlin Fakultät II, Straße des 17. Juni 135 10623 Berlin Germany
| | - Michael Haumann
- Department of Physics, Freie Universität Berlin Arnimallee 14 14195 Berlin Germany
| | - Beatrice Cula
- Institut für Chemie, Humboldt-Universitat zu Berlin Brook-Taylor-Straße 2 12489 Berlin Germany
| | - Holger Dau
- Department of Physics, Freie Universität Berlin Arnimallee 14 14195 Berlin Germany
| | - Peter Hildebrandt
- Institut für Chemie, Technische Universität Berlin Fakultät II, Straße des 17. Juni 135 10623 Berlin Germany
| | - Kallol Ray
- Institut für Chemie, Humboldt-Universitat zu Berlin Brook-Taylor-Straße 2 12489 Berlin Germany
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18
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Jeong D, Kim K, Lee Y, Cho J. Synthetic Advances for Mechanistic Insights: Metal-Oxygen Intermediates with a Macrocyclic Pyridinophane System. Acc Chem Res 2024; 57:120-130. [PMID: 38110355 DOI: 10.1021/acs.accounts.3c00582] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2023]
Abstract
ConspectusMetalloenzymes, which are proteins containing earth-abundant transition-metal ions as cofactors in the active site, generate various metal-oxygen intermediates via activating a dioxygen molecule (O2) to mediate vital metabolic functions, such as the oxidative metabolism of xenobiotics and the biotransformation of naturally occurring molecules. By replicating the active sites of metalloenzymes, many bioinorganic chemists have studied the geometric and electronic properties and reactivities of model complexes to understand the nature of enzymatic intermediates and develop bioinspired metal catalysts. Among the reported model complexes, nonporphyrinic macrocyclic ligands are the predominant coordination system widely used in stabilizing and isolating diverse metal-oxygen intermediates, which allows us to extensively investigate the physicochemical characteristics of the analogs of reactive intermediates of metalloenzymes. In particular, it has been reported that the ring size of the macrocyclic ligands, defined by the number of atoms in the macrocyclic ring, drastically affects the identity of the metal-oxygen intermediate. Thus, systematic modification of the macrocyclic ligands has been a great subject being examined in various inorganic fields.In this Account, we describe synthetic advances of a macrocyclic ligand system by introducing pyridine donors into a 12-membered tetraazamacrocyclic ligand (12-TMC) that initially has 4 amine donors. Interestingly, the backbone of the pyridinophane ligand with 2 pyridine and 2 amine donors in a 12-membered ring is shown to be much more folded than in other macrocyclic ligands, thereby allowing the axial and equatorial donors to separately control the electronic structure of metal complexes. Then, we looked over independent electronic and steric effects on metal-oxygen species with thorough physicochemical analysis. The NiIII-peroxo complexes exhibit nucleophilic reactivity dependent on the steric hindrance of the second coordination sphere. Furthermore, the C-H bond strength of the second coordination sphere has also been an important factor in determining the stability of MnIV-bis(hydroxo) intermediates. Electronic tuning on CoIII-hydroperoxo intermediates results in a trend between the electron-donating abilities of para-substituents on pyridine in the pyridinophane ligand and electrophilic reactivities, from which mechanistic insights into the metal-hydroperoxo species have been gained. Importantly, the metal-oxygen intermediates supported by the pyridinophane ligand system have revealed quite challenging chemical reactions, including dioxygenase-like nitrile activation by CoIII-peroxo intermediates and the oxidation of aldehyde and aromatic compounds by manganese-oxygen intermediates. Based on the fine substitution of donors, we have addressed that those novel reactions originated from the unique framework of the pyridinophane system incorporating spin-crossover behavior and high redox potentials of the metal-oxygen intermediates. These results will be valuable for the structure-activity relationship of metal-oxygen intermediates, giving a better understanding on the enzymatic coordination system where amino acid ligands vary for specific chemical reactions.
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Affiliation(s)
- Donghyun Jeong
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - Kyungmin Kim
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - Yujeong Lee
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - Jaeheung Cho
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
- Graduate School of Carbon Neutrality, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
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19
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Yang J, Tripodi GL, Derks MTGM, Seo MS, Lee YM, Southwell KW, Shearer J, Roithová J, Nam W. Generation, Spectroscopic Characterization, and Computational Analysis of a Six-Coordinate Cobalt(III)-Imidyl Complex with an Unusual S = 3/2 Ground State that Promotes N-Group and Hydrogen Atom-Transfer Reactions with Exogenous Substrates. J Am Chem Soc 2023; 145:26106-26121. [PMID: 37997643 PMCID: PMC11175169 DOI: 10.1021/jacs.3c08117] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2023]
Abstract
We report the synthesis and characterization of a mononuclear nonheme cobalt(III)-imidyl complex, [Co(NTs)(TQA)(OTf)]+ (1), with an S = 3/2 spin state that is capable of facilitating exogenous substrate modifications. Complex 1 was generated from the reaction of CoII(TQA)(OTf)2 with PhINTs at -20 °C. A flow setup with ESI-MS detection was used to explore the kinetics of the formation, stability, and degradation pathway of 1 in solution by treating the Co(II) precursor with PhINTs. Co K-edge XAS data revealed a distinct shift in the Co K-edge compared to the Co(II) precursor, in agreement with the formation of a Co(III) intermediate. The unusual S = 3/2 spin state was proposed based on EPR, DFT, and CASSCF calculations and Co Kβ XES results. Co K-edge XAS and IR photodissociation (IRPD) spectroscopies demonstrate that 1 is a six-coordinate species, and IRPD and resonance Raman spectroscopies are consistent with 1 being exclusively the isomer with the NT ligand occupying the vacant site trans to the TQA aliphatic amine nitrogen atom. Electronic structure calculations (broken symmetry DFT and CASSCF/NEVPT2) demonstrate an S = 3/2 oxidation state resulting from the strong antiferromagnetic coupling of an •NTs spin to the high-spin S = 2 Co(III) center. Reactivity studies of 1 with PPh3 derivatives revealed its electrophilic characteristic in the nitrene-transfer reaction. While the activation of C-H bonds by 1 was proved to be kinetically challenging, 1 could oxidize weak O-H and N-H bonds. Complex 1 is, therefore, a rare example of a Co(III)-imidyl complex capable of exogenous substrate transformations.
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Affiliation(s)
- Jindou Yang
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Guilherme L. Tripodi
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands
| | - Max T. G. M. Derks
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands
| | - Mi Sook Seo
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Yong-Min Lee
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Kendal W. Southwell
- Department of Chemistry, Trinity University, San Antonio, Texas 78212, United States
| | - Jason Shearer
- Department of Chemistry, Trinity University, San Antonio, Texas 78212, United States
| | - Jana Roithová
- Institute for Molecules and Materials, Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands
| | - Wonwoo Nam
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
- State Key Laboratory for Oxo Synthesis and Selective Oxidation, Lanzhou Institute of Chemical Physics, Chinese Academy of Sciences, Lanzhou 730000, China
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20
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Thomas J, Goldberg DP. Factors controlling the reactivity of synthetic compound-I Analogs. J PORPHYR PHTHALOCYA 2023; 27:1489-1501. [PMID: 39132380 PMCID: PMC11308481 DOI: 10.1142/s1088424623300136] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/13/2024]
Abstract
A high-valent iron(IV)-oxo porphyrin radical cation (FeIV(O)(porph+•) serves as a key, reactive intermediate for a range of heme enzymes, including cytochrome P450 (CYP), horseradish peroxidase (HRP), and catalase (CAT). Synthetic analogs of this intermediate, known as Compound-I (Cpd-I) in the heme enzyme literature, have been generated with different tetrapyrrolic, macrocyclic ligands, including porphyrin derivatives, and the closely related ring-contracted macrocycles, corroles and corrolazines. These synthetic analogs have been useful for assigning and understanding structural and spectroscopic features and examining the reactivity of Cpd-I-like species in controlled and well-defined environments. This review focuses on summarizing recent developments in the synthesis and reactivity of high-valent iron-oxo porphyrinoid complexes in two main classes of reactions, proton-coupled electron transfer (PCET) and oxygen atom transfer (OAT). The relationship between the structure of the complexes and their reactivity is emphasized, including the influence of axial ligation and peripheral macrocyclic substitution, as well as the effects of solvent and secondary coordination spheres on the reactivity of the Cpd-I analogs. In bringing together the latest findings on Cpd-I analogs, this review intends to broaden our current understanding of the factors that control the stability and reactivity of Cpd-I species. This new knowledge should, in turn, point toward new synthetic strategies for constructing catalysts that rely on Cpd-I-like reactive intermediates.
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Affiliation(s)
- Jithin Thomas
- Department of Chemistry, The Johns Hopkins University, 3400N. Charles Street, Baltimore, Maryland 21218, USA
| | - David P. Goldberg
- Department of Chemistry, The Johns Hopkins University, 3400N. Charles Street, Baltimore, Maryland 21218, USA
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21
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Grotemeyer EN, Parham JD, Jackson TA. Reaction landscape of a mononuclear Mn III-hydroxo complex with hydrogen peroxide. Dalton Trans 2023; 52:14350-14370. [PMID: 37767937 DOI: 10.1039/d3dt02672h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/29/2023]
Abstract
Peroxomanganese species have been proposed as key intermediates in the catalytic cycles of both manganese enzymes and synthetic catalysts. However, many of these intermediates have yet to be observed. Here, we report the formation of a series of intermediates, each generated from the reaction of the mononuclear MnIII-hydroxo complex [MnIII(OH)(dpaq2Me)]+ with hydrogen peroxide under slightly different conditions. By changing the acidity of the reaction mixture and/or the quantity of hydrogen peroxide added, we are able to control which intermediate forms. Using a combination of electronic absorption, 1H NMR, EPR, and X-ray absorption spectroscopies, as well as density functional theory (DFT) and complete active space self-consistent field (CASSCF) calculations, we formulate these intermediates as the bis(μ-oxo)dimanganese(III,IV) complex [MnIIIMnIV(μ-O)2(dpaq2Me)2]+, the MnIII-hydroperoxo complex [MnIII(OOH)(dpaq2Me)]+, and the MnIII-peroxo complex [MnIII(O2)(dpaq2Me)]. The formation of the MnIII-hydroperoxo species from the reaction of a MnIII-hydroxo complex with hydrogen peroxide mimics an elementary reaction proposed for many synthetic manganese catalysts that activate hydrogen peroxide.
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Affiliation(s)
- Elizabeth N Grotemeyer
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, KS 66045, USA.
| | - Joshua D Parham
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, KS 66045, USA.
| | - Timothy A Jackson
- The University of Kansas, Department of Chemistry and Center for Environmentally Beneficial Catalysis, 1567 Irving Hill Road, Lawrence, KS 66045, USA.
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22
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Barchenko M, O’Malley PJ, de Visser SP. Mechanism of Nitrogen Reduction to Ammonia in a Diiron Model of Nitrogenase. Inorg Chem 2023; 62:14715-14726. [PMID: 37650683 PMCID: PMC10498488 DOI: 10.1021/acs.inorgchem.3c02089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Indexed: 09/01/2023]
Abstract
Nitrogenase is a fascinating enzyme in biology that reduces dinitrogen from air to ammonia through stepwise reduction and protonation. Despite it being studied in detail by experimental and computational groups, there are still many unknown factors in the catalytic cycle of nitrogenase, especially related to the addition of protons and electrons and their order. A recent biomimetic study characterized a potential dinitrogen-bridged diiron cluster as a synthetic model of nitrogenase. Using strong acid and reductants, the dinitrogen was converted into ammonia molecules, but details of the mechanism remains unknown. In particular, it was unclear from the experimental studies whether the proton and electron transfer steps are sequential or alternating. Moreover, the work failed to establish what the function of the diiron core is and whether it split into mononuclear iron fragments during the reaction. To understand the structure and reactivity of the biomimetic dinitrogen-bridged diiron complex [(P2P'PhFeH)2(μ-N2)] with triphenylphosphine ligands, we performed a density functional theory study. Our computational methods were validated against experimental crystal structure coordinates, Mössbauer parameters, and vibrational frequencies and show excellent agreement. Subsequently, we investigated the alternating and consecutive addition of electrons and protons to the system. The calculations identify a number of possible reaction channels, namely, same-site protonation, alternating protonation, and complex dissociation into mononuclear iron centers. The calculations show that the overall mechanism is not a pure sequential set of electron and proton transfers but a mixture of alternating and consecutive steps. In particular, the first reaction steps will start with double proton transfer followed by an electron transfer, while thereafter, there is another proton transfer and a second electron transfer to give a complex whereby ammonia can split off with a low energetic barrier. The second channel starts with alternating protonation of the two nitrogen atoms, whereafter the initial double proton transfer, electrons and protons are added sequentially to form a hydrazine-bound complex. The latter split off ammonia spontaneously after further protonation. The various reaction channels are analyzed with valence bond and orbital diagrams. We anticipate the nitrogenase enzyme to operate with mixed alternating and consecutive protonation and electron transfer steps.
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Affiliation(s)
- Maxim Barchenko
- Manchester
Institute of Biotechnology, The University
of Manchester, 131 Princess Street, Manchester M1 7DN, U.K.
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - Patrick J. O’Malley
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, U.K.
| | - Sam P. de Visser
- Manchester
Institute of Biotechnology, The University
of Manchester, 131 Princess Street, Manchester M1 7DN, U.K.
- Department
of Chemical Engineering, The University
of Manchester, Oxford
Road, Manchester M13 9PL, U.K.
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23
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Zhu X, Yuan X, Wang Y, Ge M, Tang Y. Revealing the origin of activity in phthalocyanine-based dual-metal sites towards electrochemical nitric oxide reduction. Chem Commun (Camb) 2023; 59:9960-9963. [PMID: 37501539 DOI: 10.1039/d3cc02594b] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/29/2023]
Abstract
Coordinated ligands play crucial roles in tuning the electrochemical nitrate reduction performance of phthalocyanine (Pc)-based dual atom catalysts. With the assistance of axial O ligands, fast NO to NH3 conversion can be realized on O-Ni2-Pc and O-Cu2-Pc. A 2-N product, N2O, can be synthesized on Co2-Pc, Cr2-Pc, O-Co2-Pc, and O-Fe2-Pc through N-N coupling with high NO coverage. ΔENO can be identified as a valid descriptor to support rational M2-Pc design.
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Affiliation(s)
- Xiaorong Zhu
- College of Chemistry and Chemical Engineering, Nantong University, Nantong 226019, China.
| | - Xiaolei Yuan
- College of Chemistry and Chemical Engineering, Nantong University, Nantong 226019, China.
| | - Yijin Wang
- College of Chemistry and Chemical Engineering, Nantong University, Nantong 226019, China.
| | - Ming Ge
- College of Chemistry and Chemical Engineering, Nantong University, Nantong 226019, China.
| | - Yanfeng Tang
- College of Chemistry and Chemical Engineering, Nantong University, Nantong 226019, China.
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24
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Iglesias BA, Peranzoni NP, Faria SI, Trentin LB, Schuch AP, Chaves OA, Bertoloni RR, Nikolaou S, de Oliveira KT. DNA-Interactive and Damage Study with meso-Tetra(2-thienyl)porphyrins Coordinated with Polypyridyl Pd(II) and Pt(II) Complexes. Molecules 2023; 28:5217. [PMID: 37446879 DOI: 10.3390/molecules28135217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Revised: 06/17/2023] [Accepted: 06/30/2023] [Indexed: 07/15/2023] Open
Abstract
We report the DNA-binding properties of three porphyrins with peripheral thienyl substituents (TThPor, PdTThPor and PtTThPor). The binding capacity of each porphyrin with DNA was determined by UV-Vis and steady-state fluorescence emission spectroscopy combined with molecular docking calculations. The results suggest that the interaction of these compounds probably occurs via secondary interactions via external grooves (minor grooves) around the DNA macromolecule. Moreover, porphyrins containing peripheral Pd(II) or Pt(II) complexes (PdTThPor and PtTThPor) were able to promote photo-damage in the DNA.
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Affiliation(s)
- Bernardo Almeida Iglesias
- Bioinorganic and Porphyrinoids Materials Laboratory, Department of Chemistry, Federal University of Santa Maria (UFSM), Santa Maria 97105-900, RS, Brazil
| | - Níckolas Pippi Peranzoni
- Laboratory of Photobiology, Department of Biochemistry and Molecular Biology, Federal University of Santa Maria (UFSM), Santa Maria 97105-900, RS, Brazil
| | - Sophia Iwersen Faria
- Laboratory of Photobiology, Department of Biochemistry and Molecular Biology, Federal University of Santa Maria (UFSM), Santa Maria 97105-900, RS, Brazil
| | - Luana Belo Trentin
- Laboratory of Photobiology, Department of Biochemistry and Molecular Biology, Federal University of Santa Maria (UFSM), Santa Maria 97105-900, RS, Brazil
| | - André Passaglia Schuch
- Laboratory of Photobiology, Department of Biochemistry and Molecular Biology, Federal University of Santa Maria (UFSM), Santa Maria 97105-900, RS, Brazil
| | - Otávio Augusto Chaves
- CQC-IMS, Department of Chemistry, University of Coimbra, Rua Larga, 3004-535 Coimbra, Portugal
| | - Renan Ribeiro Bertoloni
- Laboratory of Biological Activity and Supramolecular Chemical of Coordination Compounds (LABiQSC2), Department of Chemistry, FFCLRP, University of São Paulo, Ribeirão Preto 14040-901, SP, Brazil
| | - Sofia Nikolaou
- Laboratory of Biological Activity and Supramolecular Chemical of Coordination Compounds (LABiQSC2), Department of Chemistry, FFCLRP, University of São Paulo, Ribeirão Preto 14040-901, SP, Brazil
| | - Kleber Thiago de Oliveira
- Department of Chemistry, Federal University of São Carlos, Rod. Washington Luiz, km 235, São Carlos 13565-905, SP, Brazil
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25
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Skipworth T, Klaine S, Zhang R. Photochemical generation and reactivity of a new phthalocyanine-manganese-oxo intermediate. Chem Commun (Camb) 2023; 59:6540-6543. [PMID: 37161771 DOI: 10.1039/d3cc01275a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
The first phthalocyanine-manganese-oxo intermediate was successfully generated by visible-light photolysis of chlorate or nitrite manganese(III) precursors, and its reactivity towards organic substrates was kinetically probed and compared with other related porphyrin-metal-oxo intermediates.
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Affiliation(s)
- Tristan Skipworth
- Department of Chemistry, Western Kentucky University, 1906 College Heights Blvd., Bowling Green, Kentucky, USA.
| | - Seth Klaine
- Department of Chemistry, Western Kentucky University, 1906 College Heights Blvd., Bowling Green, Kentucky, USA.
| | - Rui Zhang
- Department of Chemistry, Western Kentucky University, 1906 College Heights Blvd., Bowling Green, Kentucky, USA.
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26
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Dontas IA, Lelovas P, Parara S, Galanos A, Agrogiannis G, Goutas D, Charalambidis G, Nikolaou V, Landrou G, Kokotidou C, Apostolidou CP, Mitraki A, Coutsolelos AG. Delivery of Porphyrins Through Self-Assembling Peptide Hydrogels for Accelerated Healing of Experimental Skin Defects In Vivo. Cureus 2023; 15:e39120. [PMID: 37332461 PMCID: PMC10273017 DOI: 10.7759/cureus.39120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 05/14/2023] [Indexed: 06/20/2023] Open
Abstract
INTRODUCTION The care and healing of skin defects resulting from different causes has been the object of research to achieve rapid and complete skin regeneration. Hydrogels have been used for their ability to maintain hydration during wound healing, absorb wound exudate, and cover the underlying tissue without adherence while being transparent. In this study, we evaluated the efficacy of a hydrogel (H) with encapsulated porphyrin (H+P) on a rat model of surgically-induced skin defects. METHODS Four round 6 mm diameter skin defects were performed under general anesthesia on the dorsal area of 24 three-month-old "Young" and 24 twelve-month-old "Mature" male rats. Each age group was separated into the Control, H, and H+P groups, n=8 each, where no therapy, H, or H+P was respectively applied daily for 20 days. Digital photographs and skin biopsies were taken on the third, seventh, 10th, and 20th postoperative days and evaluated by planimetry, histology, and immunohistochemistry. RESULTS Planimetry results demonstrated significantly decreased perimeter, diameter, and area measurements (p<0.005) of group H+P compared to Control and H groups on days 10 and 20 in the young rats, while in the mature rats, the significant differences were evident earlier (perimeter third day p<0.05; diameter and area seventh day p<0.05 and p<0.005, respectively vs. H). Granulation and scar tissue formation were also reduced in the H+P groups although they were not statistically significant. CONCLUSIONS The application of H+P on the skin defects benefited the healing process in both young and mature animal groups, as evidenced by the statistically significant findings of planimetry. The beneficial healing process was more pronounced in the mature animals, both in the level of statistical significance as well as regarding time (evident already on the third day of healing), probably due to porphyrin assisting the reduced healing rate, which is observed in organisms of advanced age.
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Affiliation(s)
- Ismene A Dontas
- Veterinary Medicine, Laboratory for Research of the Musculoskeletal System, School of Medicine, National and Kapodistrian University of Athens, Athens, GRC
| | - Pavlos Lelovas
- Veterinary Medicine, Laboratory for Research of the Musculoskeletal System, School of Medicine, National and Kapodistrian University of Athens, Athens, GRC
| | - Sofia Parara
- Plastic Surgery, Laboratory for Research of the Musculoskeletal System, School of Medicine, National and Kapodistrian University of Athens, Athens, GRC
| | - Antonios Galanos
- Epidemiology and Public Health, Laboratory for Research of the Musculoskeletal System, School of Medicine, National and Kapodistrian University of Athens, Athens, GRC
| | - Georgios Agrogiannis
- First Department of Pathology, School of Medicine, National and Kapodistrian University of Athens, Athens, GRC
| | - Dimitris Goutas
- First Department of Pathology, School of Medicine, National and Kapodistrian University of Athens, Athens, GRC
| | - Georgios Charalambidis
- Laboratory of Bioinorganic Chemistry, Department of Chemistry, University of Crete, Voutes University Campus, Heraklion, GRC
| | - Vasilis Nikolaou
- Laboratory of Bioinorganic Chemistry, Department of Chemistry, University of Crete, Voutes University Campus, Heraklion, GRC
| | - Georgios Landrou
- Laboratory of Bioinorganic Chemistry, Department of Chemistry, University of Crete, Voutes University Campus, Heraklion, GRC
| | - Chrysoula Kokotidou
- Department of Materials Science and Technology, University of Crete, Voutes University Campus, Heraklion, GRC
- Institute of Electronic Structure and Laser, Foundation for Research and Technology - Hellas, Heraklion, GRC
| | - Chrysanthi-Pinelopi Apostolidou
- Department of Materials Science and Technology, University of Crete, Voutes University Campus, Heraklion, GRC
- Institute of Electronic Structure and Laser, Foundation for Research and Technology - Hellas, Heraklion, GRC
| | - Anna Mitraki
- Department of Materials Science and Technology, University of Crete, Voutes University Campus, Heraklion, GRC
- Institute of Electronic Structure and Laser, Foundation for Research and Technology - Hellas, Heraklion, GRC
| | - Athanassios G Coutsolelos
- Laboratory of Bioinorganic Chemistry, Department of Chemistry, University of Crete, Voutes University Campus, Heraklion, GRC
- Institute of Electronic Structure and Laser, Foundation for Research and Technology - Hellas, Heraklion, GRC
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27
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Jeong D, Selverstone Valentine J, Cho J. Bio-inspired mononuclear nonheme metal peroxo complexes: Synthesis, structures and mechanistic studies toward understanding enzymatic reactions. Coord Chem Rev 2023. [DOI: 10.1016/j.ccr.2023.215021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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28
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Yanai K, Hada M, Fujii H. Electric field effect of positive and negative charges of substituents on electronic structure and reactivity of oxoiron(IV) porphyrin π-cation radical complex. J Inorg Biochem 2023; 244:112208. [PMID: 37037142 DOI: 10.1016/j.jinorgbio.2023.112208] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2023] [Revised: 03/07/2023] [Accepted: 04/03/2023] [Indexed: 04/08/2023]
Abstract
Electric field effect by the positive and negative changes near the active site is an important factor for controlling the reactivity of metalloenzymes. Previously, we reported that the positive charge of the N-methyl-2-pyridinium cation increases the reactivity of oxoiron(IV) porphyrin π-cation radical complex (Compound I), due to the attractive Coulomb interaction with electrons in Compound I. To further investigate the electric field effect, we study here the effect of the negative charge of the sulfonate group on the electronic structure and reactivity using Compound I of meso-tetrakis(2,4,6-trimethyl-3-sulfonatophenyl)porphyrin (TMPS-I). Although Compound I has been known as a very unstable complex, TMPS-I is very stable in 0.1 M acetate buffer at pH = 6. The half-life of TMPS-I is estimated to be 6.9 × 103 s, which is the longest in Compound I previously reported. The redox potential of TMPS-I is estimated to be 0.76 V vs SCE in phosphate buffer, pH = 10. Kinetic analysis with stopped-flow technique indicates TMPS-I is less reactive than Compounds I reported previously. However, 1H NMR and EPR spectra of TMPS-I are very close to those of Compounds I reported previously. The DFT calculations show that the orbital energy of Compound I is drastically altered by the positive and negative charges on the meso-phenyl group, suggesting the electric field effect. The difference of the reactivity of Compound I can be rationalized with the change of the orbital energy caused by the intramolecular electric field effect of the positive and negative charges.
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Affiliation(s)
- Kanae Yanai
- Department of Chemistry, Biology, and Environmental Sciences, Graduate School of Humanities and Sciences, Nara Women's University, Nara 630-8506, Japan
| | - Masahiko Hada
- Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, Hachioji 192-0397, Japan
| | - Hiroshi Fujii
- Department of Chemistry, Biology, and Environmental Sciences, Graduate School of Humanities and Sciences, Nara Women's University, Nara 630-8506, Japan.
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29
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Katogi Y, Okamoto A, Hada M, Fujii H. Characterization and Reactivity of an Incredibly Reactive Intermediate in the Protonation Reaction of Dioxo-Manganese(V) Porphyrin with Acid. ACS Catal 2023. [DOI: 10.1021/acscatal.2c06122] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/29/2023]
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30
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Schlachta TP, Kühn FE. Cyclic iron tetra N-heterocyclic carbenes: synthesis, properties, reactivity, and catalysis. Chem Soc Rev 2023; 52:2238-2277. [PMID: 36852959 DOI: 10.1039/d2cs01064j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/01/2023]
Abstract
Cyclic iron tetracarbenes are an emerging class of macrocyclic iron N-heterocyclic carbene (NHC) complexes. They can be considered as an organometallic compound class inspired by their heme analogs, however, their electronic properties differ, e.g. due to the very strong σ-donation of the four combined NHCs in equatorial coordination. The ligand framework of iron tetracarbenes can be readily modified, allowing fine-tuning of the structural and electronic properties of the complexes. The properties of iron tetracarbene complexes are discussed quantitatively and correlations are established. The electronic nature of the tetracarbene ligand allows the isolation of uncommon iron(III) and iron(IV) species and reveals a unique reactivity. Iron tetracarbenes are successfully applied in C-H activation, CO2 reduction, aziridination and epoxidation catalysis and mechanisms as well as decomposition pathways are described. This review will help researchers evaluate the structural and electronic properties of their complexes and target their catalyst properties through ligand design.
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Affiliation(s)
- Tim P Schlachta
- Technical University of Munich, School of Natural Sciences, Department of Chemistry and Catalysis Research Center, Molecular Catalysis, Lichtenbergstraße 4, 85748 Garching, Germany.
| | - Fritz E Kühn
- Technical University of Munich, School of Natural Sciences, Department of Chemistry and Catalysis Research Center, Molecular Catalysis, Lichtenbergstraße 4, 85748 Garching, Germany.
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31
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Zhu W, Sharma N, Lee YM, El-Khouly ME, Fukuzumi S, Nam W. Use of Singlet Oxygen in the Generation of a Mononuclear Nonheme Iron(IV)-Oxo Complex. Inorg Chem 2023; 62:4116-4123. [PMID: 36862977 DOI: 10.1021/acs.inorgchem.2c04020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/04/2023]
Abstract
Nonheme iron(III)-superoxo intermediates are generated in the activation of dioxygen (O2) by nonheme iron(II) complexes and then converted to iron(IV)-oxo species by reacting with hydrogen donor substrates with relatively weak C-H bonds. If singlet oxygen (1O2) with ca. 1 eV higher energy than the ground state triplet oxygen (3O2) is employed, iron(IV)-oxo complexes can be synthesized using hydrogen donor substrates with much stronger C-H bonds. However, 1O2 has never been used in generating iron(IV)-oxo complexes. Herein, we report that a nonheme iron(IV)-oxo species, [FeIV(O)(TMC)]2+ (TMC = tetramethylcyclam), is generated using 1O2, which is produced with boron subphthalocyanine chloride (SubPc) as a photosensitizer, and hydrogen donor substrates with relatively strong C-H bonds, such as toluene (BDE = 89.5 kcal mol-1), via electron transfer from [FeII(TMC)]2+ to 1O2, which is energetically more favorable by 0.98 eV, as compared with electron transfer from [FeII(TMC)]2+ to 3O2. Electron transfer from [FeII(TMC)]2+ to 1O2 produces an iron(III)-superoxo complex, [FeIII(O2)(TMC)]2+, followed by abstracting a hydrogen atom from toluene by [FeIII(O2)(TMC)]2+ to form an iron(III)-hydroperoxo complex, [FeIII(OOH)(TMC)]2+, that is further converted to the [FeIV(O)(TMC)]2+ species. Thus, the present study reports the first example of generating a mononuclear nonheme iron(IV)-oxo complex with the use of singlet oxygen, instead of triplet oxygen, and a hydrogen atom donor with relatively strong C-H bonds. Detailed mechanistic aspects, such as the detection of 1O2 emission, the quenching by [FeII(TMC)]2+, and the quantum yields, have also been discussed to provide valuable mechanistic insights into understanding nonheme iron-oxo chemistry.
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Affiliation(s)
- Wenjuan Zhu
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Namita Sharma
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Yong-Min Lee
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Mohamed E El-Khouly
- Institute of Basic and Applied Sciences, Egypt-Japan University of Science and Technology, New Borg El-Arab 21934, Alexandria, Egypt
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Wonwoo Nam
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
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Desbois N, Osterloh WR, Sabat D, Monot C, Brandès S, Meyer M, Chaar C, Hespel L, Lebrun L, Baati R, Estour F, Gros CP. Cobalt tris(4-vinylphenyl)corrole: out of the frying pan into the polymer. Chem Commun (Camb) 2023; 59:2098-2101. [PMID: 36723238 DOI: 10.1039/d2cc06872a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
A novel cobalt corrole bearing 4-vinylphenyl groups at the 5,10,15-meso-positions of the macrocycle has been synthesized from tris(4-bromophenyl)corrole using a Suzuki coupling reaction. The spectral and electrochemical properties are reported in CH2Cl2 along with its ability to form a highly stable six-coordinate complex and cross-linked corrole-based polymer in a 59% yield.
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Affiliation(s)
- Nicolas Desbois
- Université Bourgogne Franche-Comté, ICMUB UMR CNRS 6302, Dijon, Cedex, 21078, France.
| | - W Ryan Osterloh
- Université Bourgogne Franche-Comté, ICMUB UMR CNRS 6302, Dijon, Cedex, 21078, France.
| | - Dimitri Sabat
- Université Bourgogne Franche-Comté, ICMUB UMR CNRS 6302, Dijon, Cedex, 21078, France.
| | - Camille Monot
- Université Bourgogne Franche-Comté, ICMUB UMR CNRS 6302, Dijon, Cedex, 21078, France.
| | - Stéphane Brandès
- Université Bourgogne Franche-Comté, ICMUB UMR CNRS 6302, Dijon, Cedex, 21078, France.
| | - Michel Meyer
- Université Bourgogne Franche-Comté, ICMUB UMR CNRS 6302, Dijon, Cedex, 21078, France.
| | - Capucine Chaar
- Normandie Univ., UNIROUEN, INSA Rouen, CNRS, COBRA UMR 6014, 76000, Rouen, France.
| | - Louise Hespel
- Normandie Univ., UNIROUEN, INSA Rouen, CNRS, PBS, 76000, Rouen, France
| | - Laurent Lebrun
- Normandie Univ., UNIROUEN, INSA Rouen, CNRS, PBS, 76000, Rouen, France
| | - Rachid Baati
- Université de Strasbourg, ICPEES, UMR CNRS 7515, 67087, Strasbourg, France
| | - François Estour
- Normandie Univ., UNIROUEN, INSA Rouen, CNRS, COBRA UMR 6014, 76000, Rouen, France.
| | - Claude P Gros
- Université Bourgogne Franche-Comté, ICMUB UMR CNRS 6302, Dijon, Cedex, 21078, France.
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Jeong D, Kim H, Cho J. Oxidation of Aldehydes into Carboxylic Acids by a Mononuclear Manganese(III) Iodosylbenzene Complex through Electrophilic C-H Bond Activation. J Am Chem Soc 2023; 145:888-897. [PMID: 36598425 DOI: 10.1021/jacs.2c09274] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
The oxidation of aldehyde is one of the fundamental reactions in the biological system. Various synthetic procedures and catalysts have been developed to convert aldehydes into corresponding carboxylic acids efficiently under ambient conditions. In this work, we report the oxidation of aldehydes by a mononuclear manganese(III) iodosylbenzene complex, [MnIII(TBDAP)(OIPh)(OH)]2+ (1), with kinetic and mechanistic studies in detail. The reaction of 1 with aldehydes resulted in the formation of corresponding carboxylic acids via a pre-equilibrium state. Hammett plot and reaction rates of 1 with 1°-, 2°-, and 3°-aldehydes revealed the electrophilicity of 1 in the aldehyde oxidation. A kinetic isotope effect experiment and reactivity of 1 toward cyclohexanecarboxaldehyde (CCA) analogues indicate that the reaction of 1 with aldehyde occurs through the rate-determining C-H bond activation at the formyl group. The reaction rate of 1 with CCA is correlated to the bond dissociation energy of the formyl group plotting a linear correlation with other aliphatic C-H bonds. Density functional theory calculations found that 1 electrostatically interacts with CCA at the pre-equilibrium state in which the C-H bond activation of the formyl group is performed as the most feasible pathway. Surprisingly, the rate-determining step is characterized as hydride transfer from CCA to 1, affording an (oxo)methylium intermediate. At the fundamental level, it is revealed that the hydride transfer is composed of H atom abstraction followed by a fast electron transfer. Catalytic reactions of aldehydes by 1 are also presented with a broad substrate scope. This novel mechanistic study gives better insights into the metal oxygen chemistry and would be prominently valuable for development of transition metal catalysts.
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Affiliation(s)
- Donghyun Jeong
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan44919, Republic of Korea
| | - Hyokyung Kim
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan44919, Republic of Korea
| | - Jaeheung Cho
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan44919, Republic of Korea.,Graduate School of Carbon Neutrality, Ulsan National Institute of Science and Technology (UNIST), Ulsan44919, Republic of Korea
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Maayuri R, Gandeepan P. Manganese-catalyzed hydroarylation of multiple bonds. Org Biomol Chem 2023; 21:441-464. [PMID: 36541044 DOI: 10.1039/d2ob01674e] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Transition metal-catalyzed C-H activation has become a promising strategy in organic synthesis due to its improved atom-, step- and resource economy. Considering the Earth's abundance, economic benefits, and low toxicity, 3d metal catalysts for C-H activation have received a significant focus. In particular, organometallic manganese-catalyzed C-H activation has proven to be versatile and suitable for a wide range of transformations such as C-H addition to π-components, arylation, alkylation, alkynylation, amination, and many more. Among them, manganese-catalyzed C-H addition to C-C and C-heteroatom multiple bonds exhibited unique and promising reactivity to construct a wide range of complex organic molecules. In this review, we highlight the developments in the field of manganese-catalyzed hydroarylation of multiple bonds via C-H activation with a range of applications until August 2022.
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Affiliation(s)
- Rajaram Maayuri
- Department of Chemistry, Indian Institute of Technology Tirupati, Yerpedu-Venkatagiri Road, Yerpedu Post, Tirupati District, Andhra Pradesh 517619, India.
| | - Parthasarathy Gandeepan
- Department of Chemistry, Indian Institute of Technology Tirupati, Yerpedu-Venkatagiri Road, Yerpedu Post, Tirupati District, Andhra Pradesh 517619, India.
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Lo VKY, Shing KP, Che CM. Effects of axial C-donor ligands on metalloporphyrin-catalyzed carbene and nitrene transfer reactions. ADVANCES IN ORGANOMETALLIC CHEMISTRY 2023. [DOI: 10.1016/bs.adomc.2022.10.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/22/2023]
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Skipworth T, Khashimov M, Ojo I, Zhang R. Kinetics of chromium(V)-oxo and chromium(IV)-oxo porphyrins: Reactivity and mechanism for sulfoxidation reactions. J Inorg Biochem 2022; 237:112006. [PMID: 36162208 DOI: 10.1016/j.jinorgbio.2022.112006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2022] [Revised: 09/13/2022] [Accepted: 09/13/2022] [Indexed: 01/18/2023]
Abstract
In this work, chromium(IV)-oxo porphyrins [CrIV(Por)(O)] (2) (Por = porphyrin) were produced either by oxidation of [CrIII(Por)Cl] (1) with iodobenzene diacetate or visible light photolysis of porphyrin‑chromium(III) chlorates. Subsequent oxidation of 2 with silver perchlorate gave chromium(V)-oxo porphyrins [CrV(Por)(O)](ClO4) (3) in three porphyrin ligands, including 5,10,15,20-tetramesitylporphyrin(TMP, a), 5,10,15,20-tetrakis(2,6-difluorophenyl)porphyrin(TDFPP, b), and 5,10,15,20-tetrakis(pentafluorophenyl)porphyrin (TPFPP, c). Complexes 2 and 3 reacted with thioanisoles to produce the corresponding sulfoxides, and their kinetics of sulfoxidation reactions with a series of aryl methyl sulfides(thioanisoles) were studied in organic solutions. Chromium(V)-oxo porphyrins are several orders of magnitudes more reactive than chromium(IV)-oxo species, and representative second-order rate constants (kox) for the oxidation of thioansole are (0.40 ± 0.01) M-1 s-1 (3a), and (2.82 ± 0.20) × 102 M-1 s-1 (3b), and (2.20 ± 0.01) × 103 M-1 s-1 (3c). The order of reactivity for 2 and 3 follows TPFPP > TDFPP > TMP, in agreement with the electrophilic nature of metal-oxo complexes. Hammett analyses indicate significant charge transfer in the transition states for oxidation of para-substituted thioanisoles by [CrV(Por)(O)]+. The ρ+ constants are -1.69 for 3a, -2.63 for 3b, and - 2.89 for 3c, respectively, mirror values found previously for related metal-oxo species. A mechanism involving the electrophilic attack of the CrV-oxo at sulfides to form a sulfur cation intermediate in the rate-determining step is suggested. Competition studies with chromium(III) porphyrin chloride and PhI(OAc)2 gave relative rate constants for oxidations of competing thioanisoles that closely match ratios of absolute rate constants from chromium(V)-oxo species, which are true oxidants under catalytic conditions.
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Affiliation(s)
- Tristan Skipworth
- Department of Chemistry, Western Kentucky University, 1906 College Heights Blvd #11079, Bowling Green, KY 42101-1079, United States of America
| | - Mardan Khashimov
- Department of Chemistry, Western Kentucky University, 1906 College Heights Blvd #11079, Bowling Green, KY 42101-1079, United States of America
| | - Iyanu Ojo
- Department of Chemistry, Western Kentucky University, 1906 College Heights Blvd #11079, Bowling Green, KY 42101-1079, United States of America
| | - Rui Zhang
- Department of Chemistry, Western Kentucky University, 1906 College Heights Blvd #11079, Bowling Green, KY 42101-1079, United States of America.
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Hsu WC, Zeng WQ, Lu IC, Yang T, Wang YH. Dinuclear Cobalt Complexes for Homogeneous Water Oxidation: Tuning Rate and Overpotential through the Non-Innocent Ligand. CHEMSUSCHEM 2022; 15:e202201317. [PMID: 36083105 DOI: 10.1002/cssc.202201317] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2022] [Revised: 09/09/2022] [Indexed: 06/15/2023]
Abstract
In this study, dinuclear cobalt complexes (1 and 2) featuring bis(benzimidazole)pyrazolide-type ligands (H2 L and Me2 L) were prepared and evaluated as molecular electrocatalysts for water oxidation. Notably, 1 bearing a non-innocent ligand (H2 L) displayed faster catalytic turnover than 2 under alkaline conditions, and the base dependence of water oxidation and kinetic isotope effect analysis indicated that the reaction mediated by 1 proceeded by a different mechanism relative to 2. Spectroelectrochemical, cold-spray ionization mass spectrometric and computational studies found that double deprotonation of 1 under alkaline conditions cathodically shifted the catalysis-initiating potential and further altered the turnover-limiting step from nucleophilic water attack on (H2 L)CoIII 2 (superoxo) to deprotonation of (L)CoIII 2 (OH)2 . The rate-overpotential analysis and catalytic Tafel plots showed that 1 exhibited a significantly higher rate than previously reported Ru-based dinuclear electrocatalysts at similar overpotentials. These observations suggest that using non-innocent ligands is a valuable strategy for designing effective metal-based molecular water oxidation catalysts.
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Affiliation(s)
- Wan-Chi Hsu
- Department of Chemistry, National Tsing Hua University, 101, Sec 2, Kuang-Fu Rd., 30013, Hsinchu, Taiwan
| | - Wan-Qin Zeng
- Department of Chemistry, National Chung Hsing University, 145, Xingda Rd., South Dist., 402, Taichung, Taiwan
| | - I-Chung Lu
- Department of Chemistry, National Chung Hsing University, 145, Xingda Rd., South Dist., 402, Taichung, Taiwan
| | - Tzuhsiung Yang
- Department of Chemistry, National Tsing Hua University, 101, Sec 2, Kuang-Fu Rd., 30013, Hsinchu, Taiwan
| | - Yu-Heng Wang
- Department of Chemistry, National Tsing Hua University, 101, Sec 2, Kuang-Fu Rd., 30013, Hsinchu, Taiwan
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Kessinger M, Soudackov AV, Schneider J, Bangle RE, Hammes-Schiffer S, Meyer GJ. Reorganization Energies for Interfacial Proton-Coupled Electron Transfer to a Water Oxidation Catalyst. J Am Chem Soc 2022; 144:20514-20524. [DOI: 10.1021/jacs.2c09672] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Matthew Kessinger
- Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina27599, United States
| | | | - Jenny Schneider
- Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina27599, United States
| | - Rachel E. Bangle
- Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina27599, United States
| | | | - Gerald J. Meyer
- Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina27599, United States
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39
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Strong proton transfer from phenolic ring to imine functionality in 1D azido and dicyanamido bridged Mn(II) coordination polymers: Synthesis, crystal structure and magnetic studies. Inorganica Chim Acta 2022. [DOI: 10.1016/j.ica.2022.121005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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40
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Omura K, Aiba Y, Suzuki K, Ariyasu S, Sugimoto H, Shoji O. A P450 Harboring Manganese Protoporphyrin IX Generates a Manganese Analogue of Compound I by Activating Dioxygen. ACS Catal 2022. [DOI: 10.1021/acscatal.2c01345] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Keita Omura
- Department of Chemistry, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8602, Japan
| | - Yuichiro Aiba
- Department of Chemistry, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8602, Japan
| | - Kazuto Suzuki
- Department of Chemistry, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8602, Japan
| | - Shinya Ariyasu
- Department of Chemistry, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8602, Japan
| | - Hiroshi Sugimoto
- RIKEN SPring-8 Center, Harima Institute, 1-1-1 Kouto, Sayo, Hyogo 679-5148, Japan
- Core Research for Evolutional Science and Technology (Japan), Science and Technology Agency, 5 Sanbancho, Chiyoda-ku, Tokyo 102-0075, Japan
| | - Osami Shoji
- Department of Chemistry, Graduate School of Science, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8602, Japan
- Core Research for Evolutional Science and Technology (Japan), Science and Technology Agency, 5 Sanbancho, Chiyoda-ku, Tokyo 102-0075, Japan
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41
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Effect of Brшnsted Acid on the Reactivity and Selectivity of the Oxoiron(V) Intermediates in C-H and C=C Oxidation Reactions. Catalysts 2022. [DOI: 10.3390/catal12090949] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
The effect of HClO4 on the reactivity and selectivity of the catalyst systems 1,2/H2O2/AcOH, based on nonheme iron complexes of the PDP families, [(Me2OMePDP)FeIII(μ-OH)2FeIII(MeOMe2PDP)](OTf)4 (1) and [(NMe2PDP)FeIII(μ-OH)2FeIII(NMe2PDP](OTf)4 (2), toward oxidation of benzylideneacetone (bna), adamantane (ada), and (3aR)-(+)-sclareolide (S) has been studied. Adding HClO4 (2–10 equiv. vs. Fe) has been found to result in the simultaneous improvement of the observed catalytic efficiency (i.e., product yields) and the oxidation regio- or enantioselectivity. At the same time, HClO4 causes a threefold increase of the second-order rate constant for the reaction of the key oxygen-transferring intermediate [(Me2OMePDP)FeV=O(OAc)]2+ (1a), with cyclohexane at −70 °C. The effect of strong Brønsted acid on the catalytic reactivity is discussed in terms of the reversible protonation of the Fe=O moiety of the parent perferryl intermediates.
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42
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Yokota S, Suzuki Y, Yanagisawa S, Ogura T, Nozawa S, Hada M, Fujii H. How Do the Axial and Equatorial Ligands Modulate the Reactivity of a Metal-Bound Terminal Oxidant? An Answer from the Hypochlorite Adduct of Iron(III) Porphyrin. ACS Catal 2022. [DOI: 10.1021/acscatal.2c01840] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Sawako Yokota
- Department of Chemistry, Biology, and Environmental Science, Graduate School of Humanities and Sciences, Nara Women’s University, Kitauoyanishi, Nara 630-8506, Japan
| | - Yuna Suzuki
- Department of Chemistry, Biology, and Environmental Science, Graduate School of Humanities and Sciences, Nara Women’s University, Kitauoyanishi, Nara 630-8506, Japan
| | - Sachiko Yanagisawa
- Graduate School of Science, University of Hyogo, Kouto, Kamigori, Ako, Hyogo 678-1297, Japan
| | - Takashi Ogura
- Graduate School of Science, University of Hyogo, Kouto, Kamigori, Ako, Hyogo 678-1297, Japan
| | - Shunsuke Nozawa
- Institute of Materials Structure Science, High Energy Accelerator Research Organization, 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
- Department of Materials Structure Science, School of High Energy Accelerator Science, The Graduate University for Advanced Studies, 1-1 Oho, Tsukuba, Ibaraki 305-0801, Japan
| | - Masahiko Hada
- Department of Chemistry, Graduate School of Science, Tokyo Metropolitan University, 1-1 Minamiosawa, Hachioji 192-0397, Japan
| | - Hiroshi Fujii
- Department of Chemistry, Biology, and Environmental Science, Graduate School of Humanities and Sciences, Nara Women’s University, Kitauoyanishi, Nara 630-8506, Japan
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Fan R, Wang H, Zheng X, Chen J, Ou Y, Wang Y, Mao S. Fe 2 Dimers for Non-Polar Diatomic O 2 Electroreduction. CHEMSUSCHEM 2022; 15:e202200532. [PMID: 35604289 DOI: 10.1002/cssc.202200532] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Revised: 04/26/2022] [Indexed: 06/15/2023]
Abstract
Non-polar diatomic molecule activation is of great significance for catalysis. Despite the high atomic efficiency, the catalytic performance of single-atom catalysts is limited by insufficient receiving sites for diatomic molecule adsorption. Here, Fe2 dimers were successfully synthesized through precisely regulating the metal loading on metal-organic frameworks. The unique role of metal dimers in activating diatomic O2 molecules was explored. In alkaline electrolytes, the specific oxygen reduction reaction activity of Fe2 dimers was 7 times higher than that of Fe1 counterparts. The hydrogen atom transfer probes indicated a different activation mode for O2 on Fe1 and Fe2 dimers, respectively. Theoretical calculation results revealed that Fe2 dimers opened up a new reaction pathway by promoting the direct breaking of O=O bonds, thus avoiding the usual formation of *OOH intermediates, which helped explain the lower H2 O2 yield and higher specific activity.
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Affiliation(s)
- Ruxue Fan
- Advanced Materials and Catalysis Group, Institute of Catalysis, Department of Chemistry, Zhejiang University, Hangzhou, 310028, P. R. China
| | - Haiyan Wang
- Key Laboratory of the Ministry of Education for Advanced Catalysis Materials, Department of Chemistry, Zhejiang Normal University, Jinhua, 321004, P. R. China
| | - Xiaozhong Zheng
- Advanced Materials and Catalysis Group, Institute of Catalysis, Department of Chemistry, Zhejiang University, Hangzhou, 310028, P. R. China
| | - Jiadong Chen
- Advanced Materials and Catalysis Group, Institute of Catalysis, Department of Chemistry, Zhejiang University, Hangzhou, 310028, P. R. China
| | - Yang Ou
- Center of Electron Microscopy and State Key Laboratory of Silicon Materials, School of Materials Science and Engineering, Zhejiang University, Hangzhou, 310027, P.R. China
| | - Yong Wang
- Advanced Materials and Catalysis Group, Institute of Catalysis, Department of Chemistry, Zhejiang University, Hangzhou, 310028, P. R. China
- Center of Chemistry for Frontier Technologies, Zhejiang University, Hangzhou, 310028, P. R. China
| | - Shanjun Mao
- Advanced Materials and Catalysis Group, Institute of Catalysis, Department of Chemistry, Zhejiang University, Hangzhou, 310028, P. R. China
- Center of Chemistry for Frontier Technologies, Zhejiang University, Hangzhou, 310028, P. R. China
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Naskar T, Jana M, Majumdar A. Binuclear manganese(II)-thiolate complexes: Synthesis, characterization and nitrite induced structural changes. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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45
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Gemenetzi A, Moularas C, Belles L, Deligiannakis Y, Louloudi M. Reversible Plasmonic Switch in a Molecular Oxidation Catalysis Process. ACS Catal 2022. [DOI: 10.1021/acscatal.2c02287] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Aikaterini Gemenetzi
- Laboratory of Biomimetic Catalysis & Hybrid Materials, Department of Chemistry, University of Ioannina, Ioannina 45110, Greece
| | - Constantinos Moularas
- Laboratory of Physical Chemistry of Materials & Environment, Department of Physics, University of Ioannina, Ioannina 45110, Greece
| | - Loukas Belles
- Laboratory of Physical Chemistry of Materials & Environment, Department of Physics, University of Ioannina, Ioannina 45110, Greece
| | - Yiannis Deligiannakis
- Laboratory of Physical Chemistry of Materials & Environment, Department of Physics, University of Ioannina, Ioannina 45110, Greece
| | - Maria Louloudi
- Laboratory of Biomimetic Catalysis & Hybrid Materials, Department of Chemistry, University of Ioannina, Ioannina 45110, Greece
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46
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Koebke KJ, Pinter TBJ, Pitts WC, Pecoraro VL. Catalysis and Electron Transfer in De Novo Designed Metalloproteins. Chem Rev 2022; 122:12046-12109. [PMID: 35763791 PMCID: PMC10735231 DOI: 10.1021/acs.chemrev.1c01025] [Citation(s) in RCA: 25] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
One of the hallmark advances in our understanding of metalloprotein function is showcased in our ability to design new, non-native, catalytically active protein scaffolds. This review highlights progress and milestone achievements in the field of de novo metalloprotein design focused on reports from the past decade with special emphasis on de novo designs couched within common subfields of bioinorganic study: heme binding proteins, monometal- and dimetal-containing catalytic sites, and metal-containing electron transfer sites. Within each subfield, we highlight several of what we have identified as significant and important contributions to either our understanding of that subfield or de novo metalloprotein design as a discipline. These reports are placed in context both historically and scientifically. General suggestions for future directions that we feel will be important to advance our understanding or accelerate discovery are discussed.
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Affiliation(s)
- Karl J. Koebke
- Department of Chemistry, University of Michigan Ann Arbor, MI 48109 USA
| | | | - Winston C. Pitts
- Department of Chemistry, University of Michigan Ann Arbor, MI 48109 USA
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47
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Lu X, Wang S, Qin JH. Isolating Fe-O 2 Intermediates in Dioxygen Activation by Iron Porphyrin Complexes. Molecules 2022; 27:4690. [PMID: 35897870 PMCID: PMC9332324 DOI: 10.3390/molecules27154690] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2022] [Revised: 07/12/2022] [Accepted: 07/18/2022] [Indexed: 11/30/2022] Open
Abstract
Dioxygen (O2) is an environmentally benign and abundant oxidant whose utilization is of great interest in the design of bioinspired synthetic catalytic oxidation systems to reduce energy consumption. However, it is unfortunate that utilization of O2 is a significant challenge because of the thermodynamic stability of O2 in its triplet ground state. Nevertheless, nature is able to overcome the spin state barrier using enzymes, which contain transition metals with unpaired d-electrons facilitating the activation of O2 by metal coordination. This inspires bioinorganic chemists to synthesize biomimetic small-molecule iron porphyrin complexes to carry out the O2 activation, wherein Fe-O2 species have been implicated as the key reactive intermediates. In recent years, a number of Fe-O2 intermediates have been synthesized by activating O2 at iron centers supported on porphyrin ligands. In this review, we focus on a few examples of these advances with emphasis in each case on the particular design of iron porphyrin complexes and particular reaction environments to stabilize and isolate metal-O2 intermediates in dioxygen activation, which will provide clues to elucidate structures of reactive intermediates and mechanistic insights in biological processes.
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Affiliation(s)
- Xiaoyan Lu
- College of Chemistry and Chemical Engineering, Luoyang Normal University, Luoyang 471934, China; (S.W.); (J.-H.Q.)
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48
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Fontana LA, Rigolin VH, Ribeiro MA, Barros WP, Megiatto JD. A synthetic tactic to substitute axial ligands in sterically demanding Ru(II)porphyrinates. Dalton Trans 2022; 51:9971-9977. [PMID: 35708623 DOI: 10.1039/d2dt01095j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report a synthetic strategy that allows for the preparation of sterically encumbered heteroleptic Ru(II)porphyrinates with the desired configuration of stable/inert and weak/labile axial ligands to direct reactions between substrates to exclusively occur at the sterically encumbered face. To demonstrate the method, we describe the synthesis of a strapped-Ru(II)porphyrinate bearing a stable/inert triphenylphosphine (PPh3) bulky axial ligand coordinated exo to the central cavity and a weak/labile methanol molecule coordinated at the internal axial position. With this axial ligand configuration, the reported Ru(II)porphyrinate exclusively promotes carbene transfer reactions to olefins through the central cavity, which has been verified by the selective formation of cycloprane-linked [2]rotaxanes.
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Affiliation(s)
- Liniquer A Fontana
- Institute of Chemistry, University of Campinas (UNICAMP), POBox 6154, 13083-970, Campinas, Brazil.
| | - Vitor H Rigolin
- Institute of Chemistry, University of Campinas (UNICAMP), POBox 6154, 13083-970, Campinas, Brazil.
| | - Marcos A Ribeiro
- Institute of Chemistry, University of Campinas (UNICAMP), POBox 6154, 13083-970, Campinas, Brazil.
| | - Wdeson P Barros
- Institute of Chemistry, University of Campinas (UNICAMP), POBox 6154, 13083-970, Campinas, Brazil.
| | - Jackson D Megiatto
- Institute of Chemistry, University of Campinas (UNICAMP), POBox 6154, 13083-970, Campinas, Brazil.
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Omar (Al-Ahdal) ZT, Jadhav S, Shejul S, Chavan P, Pathrikar R, Rai M. Synthesis, Magnetic Moment, Antibacterial, and Antifungal Studies of INH Incorporating Schiff Base Metal Complexes. Polycycl Aromat Compd 2022. [DOI: 10.1080/10406638.2022.2077776] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
| | - Shivaji Jadhav
- Department of Chemistry, Tarai College of Arts and Science, Aurangabad, Maharashtra, India
| | - Sumit Shejul
- Department of Chemistry, Dr. Rafiq Zakaria College for Women, Aurangabad, Maharashtra, India
| | - Pravin Chavan
- Department of Chemistry, Doshi Vakil College, Goregaon, Maharashtra, India
| | - Rashmi Pathrikar
- Department of Chemistry, Rajshri Shahu College, Aurangabad, Maharashtra, India
| | - Megha Rai
- Department of Chemistry, Dr. Rafiq Zakaria College for Women, Aurangabad, Maharashtra, India
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50
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Nandy A, Duan C, Goffinet C, Kulik HJ. New Strategies for Direct Methane-to-Methanol Conversion from Active Learning Exploration of 16 Million Catalysts. JACS AU 2022; 2:1200-1213. [PMID: 35647589 PMCID: PMC9135396 DOI: 10.1021/jacsau.2c00176] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Revised: 04/12/2022] [Accepted: 04/15/2022] [Indexed: 05/03/2023]
Abstract
Despite decades of effort, no earth-abundant homogeneous catalysts have been discovered that can selectively oxidize methane to methanol. We exploit active learning to simultaneously optimize methane activation and methanol release calculated with machine learning-accelerated density functional theory in a space of 16 M candidate catalysts including novel macrocycles. By constructing macrocycles from fragments inspired by synthesized compounds, we ensure synthetic realism in our computational search. Our large-scale search reveals that low-spin Fe(II) compounds paired with strong-field (e.g., P or S-coordinating) ligands have among the best energetic tradeoffs between hydrogen atom transfer (HAT) and methanol release. This observation contrasts with prior efforts that have focused on high-spin Fe(II) with weak-field ligands. By decoupling equatorial and axial ligand effects, we determine that negatively charged axial ligands are critical for more rapid release of methanol and that higher-valency metals [i.e., M(III) vs M(II)] are likely to be rate-limited by slow methanol release. With full characterization of barrier heights, we confirm that optimizing for HAT does not lead to large oxo formation barriers. Energetic span analysis reveals designs for an intermediate-spin Mn(II) catalyst and a low-spin Fe(II) catalyst that are predicted to have good turnover frequencies. Our active learning approach to optimize two distinct reaction energies with efficient global optimization is expected to be beneficial for the search of large catalyst spaces where no prior designs have been identified and where linear scaling relationships between reaction energies or barriers may be limited or unknown.
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Affiliation(s)
- Aditya Nandy
- Department
of Chemical Engineering, Massachusetts Institute
of Technology, Cambridge, Massachusetts 02139, United States
- Department
of Chemistry, Massachusetts Institute of
Technology, Cambridge, Massachusetts 02139, United States
| | - Chenru Duan
- Department
of Chemical Engineering, Massachusetts Institute
of Technology, Cambridge, Massachusetts 02139, United States
- Department
of Chemistry, Massachusetts Institute of
Technology, Cambridge, Massachusetts 02139, United States
| | - Conrad Goffinet
- Department
of Chemical Engineering, Massachusetts Institute
of Technology, Cambridge, Massachusetts 02139, United States
| | - Heather J. Kulik
- Department
of Chemical Engineering, Massachusetts Institute
of Technology, Cambridge, Massachusetts 02139, United States
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