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Roy D, Roy B, Naskar B, Bala T. Detailed Study on the Interfacial Interaction between Different Polyoxometalates and Tetronic Block Copolymers Exploring the Langmuir-Blodgett Technique. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2024; 40:16030-16047. [PMID: 38803109 DOI: 10.1021/acs.langmuir.4c00317] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2024]
Abstract
Polyoxometalates (POMs) interact with various biologically relevant entities. A basic understanding of this interaction is very important for various applications in the biological field. In this work, the focus is on the study of the interaction between tetronics and Keggin POMs. T701 and T90R4 are the two tetronics considered here; they have different solubilities in water due to different PPO/PEO ratios. The arrangement of PPO and PEO is also different with respect to the central ethylenediamine groups. Three different Keggin-type POMs, phosphomolybdic acid (PMA), phosphotungstic acid (PTA), and silicotungstic acid (STA), with different charge densities are chosen for an elaborate investigation using Langmuir-Blodgett technique. The observation is analyzed thoroughly, which shows both electrostatic interaction and adsorption of POMs on the PPO blocks of the tetronics due to the chaotropic effect, which is responsible for the binding of POMs (in subphase) with the tetronic monolayer. This interaction results in an expanded yet rigid monolayer for POM-tetronic association on the surface. Surface pressure vs mean molecular area isotherm is the key characterization to reach the conclusion. UV-vis spectroscopy, NMR, ITC, ellipsometric studies, FTIR, and SEM also serve as supportive characterization techniques.
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Affiliation(s)
- Dipali Roy
- Department of Chemistry, University of Calcutta, 92 A.P.C. Road, Kolkata 700009, India
| | - Bodhishatwa Roy
- Department of Electronic Science, University of Calcutta, 92 A.P.C. Road, Kolkata 700009, India
| | - Bappaditya Naskar
- Department of Chemistry, Sundarban Hazi Desarat College, Pathankhali 743611, India
| | - Tanushree Bala
- Department of Chemistry, University of Calcutta, 92 A.P.C. Road, Kolkata 700009, India
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Wang Y, Guo M, Xu X. Nanoproteases: Alternatives to Natural Protease for Biotechnological Applications. Chemistry 2024; 30:e202401178. [PMID: 38705854 DOI: 10.1002/chem.202401178] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2024] [Revised: 04/26/2024] [Accepted: 04/29/2024] [Indexed: 05/07/2024]
Abstract
Some nanomaterials with intrinsic protease-like activity have the advantages of good stability, biosafety, low price, large-scale preparation and unique property of nanomaterials, which are promising alternatives for natural proteases in various applications. An especial term, "nanoprotease", has been coined to stress the intrinsic proteolytic property of these nanomaterials. As a new generation of artificial proteases, they have become a burgeoning field, attracting many researchers to design and synthesize high performance nanoproteases. In this review, we summarize recent progress on all types of nanoproteases with regard of their activity, mechanism and application and introduce a new and effective strategy for engineering high-performance nanoproteases. In addition, we discuss the challenges and opportunities of nanoprotease research in the future.
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Affiliation(s)
- Yaru Wang
- Department of Chemistry, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026, P. R. China
| | - Mingxiu Guo
- Department of Chemistry, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026, P. R. China
| | - Xiaolong Xu
- Department of Chemistry, School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, 230026, P. R. China
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Salazar Marcano DE, Savić ND, Declerck K, Abdelhameed SAM, Parac-Vogt TN. Reactivity of metal-oxo clusters towards biomolecules: from discrete polyoxometalates to metal-organic frameworks. Chem Soc Rev 2024; 53:84-136. [PMID: 38015569 DOI: 10.1039/d3cs00195d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2023]
Abstract
Metal-oxo clusters hold great potential in several fields such as catalysis, materials science, energy storage, medicine, and biotechnology. These nanoclusters of transition metals with oxygen-based ligands have also shown promising reactivity towards several classes of biomolecules, including proteins, nucleic acids, nucleotides, sugars, and lipids. This reactivity can be leveraged to address some of the most pressing challenges we face today, from fighting various diseases, such as cancer and viral infections, to the development of sustainable and environmentally friendly energy sources. For instance, metal-oxo clusters and related materials have been shown to be effective catalysts for biomass conversion into renewable fuels and platform chemicals. Furthermore, their reactivity towards biomolecules has also attracted interest in the development of inorganic drugs and bioanalytical tools. Additionally, the structural versatility of metal-oxo clusters allows for the efficiency and selectivity of the biomolecular reactions they promote to be readily tuned, thereby providing a pathway towards reaction optimization. The properties of the catalyst can also be improved through incorporation into solid supports or by linking metal-oxo clusters together to form Metal-Organic Frameworks (MOFs), which have been demonstrated to be powerful heterogeneous catalysts. Therefore, this review aims to provide a comprehensive and critical analysis of the state of the art on biomolecular transformations promoted by metal-oxo clusters and their applications, with a particular focus on structure-activity relationships.
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Affiliation(s)
| | - Nada D Savić
- Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium.
| | - Kilian Declerck
- Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium.
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Tian N, Chu D, Wang H, Yan H. Synthesis and anti-HIV-1 activity evaluation of Keggin-type polyoxometalates with amino acid as organic cations. Bioorg Med Chem Lett 2023; 91:129380. [PMID: 37331638 DOI: 10.1016/j.bmcl.2023.129380] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Revised: 06/05/2023] [Accepted: 06/12/2023] [Indexed: 06/20/2023]
Abstract
Polyoxometalates (POMs), as a class of multinuclear metal oxygen clusters, have promising biological activities. And their amino acid derivatives will lead to better pharmacological activity by the diversity in structures and properties. With reference to the anti-HIV-1 activities of PM-19 (K7PTi2W10O40) and its pyridinium derivatives, a series of novel Keggin-type POMs with amino acid as organic cations (A7PTi2W10O40) were synthesized by hydrothermal synthetic method. The final products were characterized by 1H NMR, Elemental analyzes and single crystal X-ray diffraction. All the synthesized compounds were obtained in the yields of 44.3-61.7% and evaluated the cytotoxicity and anti-HIV-1 activity in vitro. Compared with the reference compound PM-19, the target compounds had a lower toxicity to TZM-bl cells and a higher inhibitory activity against HIV-1. Among them, compound A3 showed higher anti-HIV-1 activity with IC50 of 0.11 nM than that of PM-19 with 4.68 nM. This study demonstrated that combination of Keggin-type POMs and amino acids can be a new strategy to enhance the anti-HIV-1 biological activity of POMs. All results will be expected to helpful for developing more potent and effective HIV-1 inhibitors.
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Affiliation(s)
- Nana Tian
- Beijing Tide Pharmaceutical Co., Ltd, Beijing 100176, China
| | - Dongchen Chu
- Faculty of Environment and Life, Beijing University of Technology, Beijing 100124, China
| | - Hongjun Wang
- Beijing Tide Pharmaceutical Co., Ltd, Beijing 100176, China.
| | - Hong Yan
- Faculty of Environment and Life, Beijing University of Technology, Beijing 100124, China.
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Salazar Marcano D, Savić ND, Abdelhameed SAM, de Azambuja F, Parac-Vogt TN. Exploring the Reactivity of Polyoxometalates toward Proteins: From Interactions to Mechanistic Insights. JACS AU 2023; 3:978-990. [PMID: 37124292 PMCID: PMC10131212 DOI: 10.1021/jacsau.3c00011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/05/2023] [Revised: 01/31/2023] [Accepted: 02/01/2023] [Indexed: 05/03/2023]
Abstract
The latest advances in the study of the reactivity of metal-oxo clusters toward proteins showcase how fundamental insights obtained so far open new opportunities in biotechnology and medicine. In this Perspective, these studies are discussed through the lens of the reactivity of a family of soluble anionic metal-oxo nanoclusters known as polyoxometalates (POMs). POMs act as catalysts in a wide range of reactions with several different types of biomolecules and have promising therapeutic applications due to their antiviral, antibacterial, and antitumor activities. However, the lack of a detailed understanding of the mechanisms behind biochemically relevant reactions-particularly with complex biological systems such as proteins-still hinders further developments. Hence, in this Perspective, special attention is given to reactions of POMs with peptides and proteins showcasing a molecular-level understanding of the reaction mechanism. In doing so, we aim to highlight both existing limitations and promising directions of future research on the reactivity of metal-oxo clusters toward proteins and beyond.
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Granadeiro CM, Julião D, Ribeiro SO, Cunha-Silva L, Balula SS. Recent advances in lanthanide-coordinated polyoxometalates: from structural overview to functional materials. Coord Chem Rev 2023. [DOI: 10.1016/j.ccr.2022.214914] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Padilla-Godínez FJ, Ruiz-Ortega LI, Guerra-Crespo M. Nanomedicine in the Face of Parkinson's Disease: From Drug Delivery Systems to Nanozymes. Cells 2022; 11:3445. [PMID: 36359841 PMCID: PMC9657131 DOI: 10.3390/cells11213445] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2022] [Revised: 10/18/2022] [Accepted: 10/26/2022] [Indexed: 01/02/2024] Open
Abstract
The complexity and overall burden of Parkinson's disease (PD) require new pharmacological approaches to counteract the symptomatology while reducing the progressive neurodegeneration of affected dopaminergic neurons. Since the pathophysiological signature of PD is characterized by the loss of physiological levels of dopamine (DA) and the misfolding and aggregation of the alpha-synuclein (α-syn) protein, new proposals seek to restore the lost DA and inhibit the progressive damage derived from pathological α-syn and its impact in terms of oxidative stress. In this line, nanomedicine (the medical application of nanotechnology) has achieved significant advances in the development of nanocarriers capable of transporting and delivering basal state DA in a controlled manner in the tissues of interest, as well as highly selective catalytic nanostructures with enzyme-like properties for the elimination of reactive oxygen species (responsible for oxidative stress) and the proteolysis of misfolded proteins. Although some of these proposals remain in their early stages, the deepening of our knowledge concerning the pathological processes of PD and the advances in nanomedicine could endow for the development of potential treatments for this still incurable condition. Therefore, in this paper, we offer: (i) a brief summary of the most recent findings concerning the physiology of motor regulation and (ii) the molecular neuropathological processes associated with PD, together with (iii) a recapitulation of the current progress in controlled DA release by nanocarriers and (iv) the design of nanozymes, catalytic nanostructures with oxidoreductase-, chaperon, and protease-like properties. Finally, we conclude by describing the prospects and knowledge gaps to overcome and consider as research into nanotherapies for PD continues, especially when clinical translations take place.
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Affiliation(s)
- Francisco J. Padilla-Godínez
- Neurosciences Division, Cell Physiology Institute, National Autonomous University of Mexico, Coyoacan, Mexico City 04510, Mexico
- Regenerative Medicine Laboratory, Department of Physiology, Faculty of Medicine, National Autonomous University of Mexico, Coyoacan, Mexico City 04510, Mexico
| | - Leonardo I. Ruiz-Ortega
- Institute for Physical Sciences, National Autonomous University of Mexico, Cuernavaca 62210, Mexico
- Department of Biological Sciences, Columbia University, New York, NY 10027, USA
| | - Magdalena Guerra-Crespo
- Neurosciences Division, Cell Physiology Institute, National Autonomous University of Mexico, Coyoacan, Mexico City 04510, Mexico
- Regenerative Medicine Laboratory, Department of Physiology, Faculty of Medicine, National Autonomous University of Mexico, Coyoacan, Mexico City 04510, Mexico
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Chang D, Li Y, Chen Y, Wang X, Zang D, Liu T. Polyoxometalate-based nanocomposites for antitumor and antibacterial applications. NANOSCALE ADVANCES 2022; 4:3689-3706. [PMID: 36133327 PMCID: PMC9470027 DOI: 10.1039/d2na00391k] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2022] [Accepted: 08/17/2022] [Indexed: 06/07/2023]
Abstract
Polyoxometalates (POMs), as emerging inorganic metal oxides, have been shown to have significant biological activity and great medicinal value. Nowadays, biologically active POM-based organic-inorganic hybrid materials have become the next generation of antibacterial and anticancer drugs because of their customizable molecular structures related to their highly enhanced antitumor activity and reduced toxicity to healthy cells. In this review, the current developed strategies with POM-based materials for the purpose of antibacterial and anticancer activities from different action principles inducing cell death and hyperpolarization, cell plasma membrane destruction, interference with bacterial respiratory chain and inhibiting bacterial growth are overviewed. Moreover, specific interactions between POM-based materials and biomolecules are highlighted for a better understanding of their antibacterial and anticancer mechanisms. POMs have great promise as next-generation antibacterial and anticancer drugs, and this review will provide a valuable systematic reference for the further development of POM-based nanomaterials.
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Affiliation(s)
- Dening Chang
- Institute of Materia Medica, Shandong First Medical University & Shandong Academy of Medical Sciences Jinan 250117 PR China
| | - Yanda Li
- Institute of Materia Medica, Shandong First Medical University & Shandong Academy of Medical Sciences Jinan 250117 PR China
| | - Yuxuan Chen
- Institute of Materia Medica, Shandong First Medical University & Shandong Academy of Medical Sciences Jinan 250117 PR China
| | - Xiaojing Wang
- Institute of Materia Medica, Shandong First Medical University & Shandong Academy of Medical Sciences Jinan 250117 PR China
| | - Dejin Zang
- Institute of Materia Medica, Shandong First Medical University & Shandong Academy of Medical Sciences Jinan 250117 PR China
| | - Teng Liu
- Institute of Materia Medica, Shandong First Medical University & Shandong Academy of Medical Sciences Jinan 250117 PR China
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Lu H, Fang L, Wang X, Wu D, Liu C, Liu X, Wang J, Gao Y, Min W. Structure-Activity Relationship of Pine Nut-Derived Peptides and Their Protective Effect on Nerve-Cell Mitochondria. Foods 2022; 11:foods11101428. [PMID: 35626998 PMCID: PMC9140850 DOI: 10.3390/foods11101428] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2022] [Revised: 05/14/2022] [Accepted: 05/14/2022] [Indexed: 12/02/2022] Open
Abstract
This study aimed to investigate the structure-activity relationship of the pine nut antioxidant peptide WYPGK and its derivative peptides, and to evaluate the protective effect of the latter on oxidative damage to mitochondrial structure and function in PC12 cells. Molecular docking revealed the derivative peptides WYFGK and WYSGK to have higher affinity to the active region of sirtuin 3 (SIRT3) (−6.08 kcal/mol and −5.87 kcal/mol, respectively), hence indicating that they are promising SIRT3 inducers and antioxidant factors. The derivative peptide WYSGK presented the highest ORAC value (5457.70 µmol TE/g), ABTS scavenging activity (70.05%), and Fe2+-chelating activity (81.70%), followed by WYPGK and WYFGK. Circular dichroism and nuclear magnetic resonance data suggested that the presence of 3-Ser in WYSGK increased its β-sheet content, and that the active hydrogen atoms produced chemical shifts. In H2O2-induced PC12 cells, WYSGK substantially reduced ROS and MDA levels, and increased ATP levels. Transmission electron microscopy and Seahorse Analyze assay proved the peptide WYSGK to significantly alleviate mitochondrial damage and respiratory dysfunction (p < 0.05), thereby implying that a study of structure-activity relationships of the peptides can possibly be an effective approach for the development of functional factors.
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Affiliation(s)
- Hongyan Lu
- College of Food Science and Engineering, Jilin Agricultural University, Changchun 130118, China; (H.L.); (L.F.); (X.W.); (D.W.); (C.L.); (X.L.); (J.W.); (Y.G.)
- National Engineering Laboratory of Wheat and Corn Deep Processing, Changchun 130118, China
| | - Li Fang
- College of Food Science and Engineering, Jilin Agricultural University, Changchun 130118, China; (H.L.); (L.F.); (X.W.); (D.W.); (C.L.); (X.L.); (J.W.); (Y.G.)
- National Engineering Laboratory of Wheat and Corn Deep Processing, Changchun 130118, China
| | - Xiyan Wang
- College of Food Science and Engineering, Jilin Agricultural University, Changchun 130118, China; (H.L.); (L.F.); (X.W.); (D.W.); (C.L.); (X.L.); (J.W.); (Y.G.)
- National Engineering Laboratory of Wheat and Corn Deep Processing, Changchun 130118, China
| | - Dan Wu
- College of Food Science and Engineering, Jilin Agricultural University, Changchun 130118, China; (H.L.); (L.F.); (X.W.); (D.W.); (C.L.); (X.L.); (J.W.); (Y.G.)
- National Engineering Laboratory of Wheat and Corn Deep Processing, Changchun 130118, China
| | - Chunlei Liu
- College of Food Science and Engineering, Jilin Agricultural University, Changchun 130118, China; (H.L.); (L.F.); (X.W.); (D.W.); (C.L.); (X.L.); (J.W.); (Y.G.)
- National Engineering Laboratory of Wheat and Corn Deep Processing, Changchun 130118, China
| | - Xiaoting Liu
- College of Food Science and Engineering, Jilin Agricultural University, Changchun 130118, China; (H.L.); (L.F.); (X.W.); (D.W.); (C.L.); (X.L.); (J.W.); (Y.G.)
- National Engineering Laboratory of Wheat and Corn Deep Processing, Changchun 130118, China
| | - Ji Wang
- College of Food Science and Engineering, Jilin Agricultural University, Changchun 130118, China; (H.L.); (L.F.); (X.W.); (D.W.); (C.L.); (X.L.); (J.W.); (Y.G.)
- National Engineering Laboratory of Wheat and Corn Deep Processing, Changchun 130118, China
| | - Yawen Gao
- College of Food Science and Engineering, Jilin Agricultural University, Changchun 130118, China; (H.L.); (L.F.); (X.W.); (D.W.); (C.L.); (X.L.); (J.W.); (Y.G.)
- National Engineering Laboratory of Wheat and Corn Deep Processing, Changchun 130118, China
| | - Weihong Min
- College of Food Science and Engineering, Jilin Agricultural University, Changchun 130118, China; (H.L.); (L.F.); (X.W.); (D.W.); (C.L.); (X.L.); (J.W.); (Y.G.)
- National Engineering Laboratory of Wheat and Corn Deep Processing, Changchun 130118, China
- Correspondence: ; Tel.: +86-139-4491-9697; Fax: +86-431-8451-7235
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Liu X, Ma Z, Nie J, Fang J, Li W. Exploiting Redox-Complementary Peptide/Polyoxometalate Coacervates for Spontaneously Curing into Antimicrobial Adhesives. Biomacromolecules 2021; 23:1009-1019. [PMID: 34964608 DOI: 10.1021/acs.biomac.1c01387] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Recently, there has been a wave of reports on the fabrication of peptide-based underwater adhesives with the aim of understanding the adhesion mechanism of marine sessile organisms or creating new biomaterials beyond nature. However, the poor shear adhesion performance of the current peptide adhesives has largely hindered their applications. Herein, we proposed to sequentially perform the interfacial adhesion and bulk cohesion of peptide-based underwater adhesives using two redox-complementary peptide/polyoxometalate (POM) coacervates. The oxidative coacervates were prepared by mixing oxidative H5PMo10V2O40 and cationic peptides in an aqueous solution. The reductive coacervates consisted of K5BW12O40 and cysteine-containing reductive peptides. Each of the individual coacervate has well-defined spreading capacity to achieve fast interfacial attachment and adhesion, but their cohesion is poor. However, after mixing the two redox-complementary coacervates at the target surface, effective adhesion and spontaneous curing were observed. We identified that the spontaneous curing resulted from the H5PMo10V2O40-regulated oxidization of cysteine-containing peptides. The formed intermolecular disulfide bonds improved the cross-linking density of the dual-peptide/POM coacervates, giving rise to the enhanced bulk cohesion and mechanical strength. More importantly, the resultant adhesives showcased excellent bioactivity to selectively suppress the growth of Gram-positive bacteria due to the presence of the polyoxometalates. This work raises further potential in the creation of biomimetic adhesives through the orchestrating of covalent and noncovalent interactions in a sequential fashion.
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Affiliation(s)
- Xiaohuan Liu
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Qianjin Avenue 2699, Changchun 130012, China
| | - Zhiyuan Ma
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Qianjin Avenue 2699, Changchun 130012, China
| | - Junlian Nie
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Qianjin Avenue 2699, Changchun 130012, China
| | - Jun Fang
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Qianjin Avenue 2699, Changchun 130012, China
| | - Wen Li
- State Key Laboratory of Supramolecular Structure and Materials, College of Chemistry, Jilin University, Qianjin Avenue 2699, Changchun 130012, China
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Abdelhameed SAM, Ly HGT, Moons J, de Azambuja F, Proost P, Parac-Vogt TN. Expanding the reactivity of inorganic clusters towards proteins: the interplay between the redox and hydrolytic activity of Ce(iv)-substituted polyoxometalates as artificial proteases. Chem Sci 2021; 12:10655-10663. [PMID: 34447559 PMCID: PMC8356750 DOI: 10.1039/d1sc02760c] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2021] [Accepted: 07/05/2021] [Indexed: 12/13/2022] Open
Abstract
The ability of soluble metal-oxo clusters to specifically interact with protein surfaces makes them attractive as potential inorganic drugs and as artificial enzymes. In particular, metal-substituted polyoxometalates (MS-POMs) are remarkably selective in hydrolyzing a range of different proteins. However, the influence of MS-POMs' redox chemistry on their proteolytic activity remains virtually unexplored. Herein we report a highly site-selective hydrolysis of hemoglobin (Hb), a large tetrameric globular protein, by a Ce(iv)-substituted Keggin polyoxometalate (CeIVK), and evaluate the effect of CeIVK's redox chemistry on its reactivity and selectivity as an artificial protease. At pH 5.0, incubation of Hb with CeIVK resulted in strictly selective protein hydrolysis at six Asp-X bonds, two of which were located in the α-chain (α(Asp75-Leu76) and α(Asp94-Pro95)) and five at the β-chain (β(Asp51-Ala52), β(Asp68-Ser69), β(Asp78-Asp79), β(Asp98-Pro99) and β(Asp128-Phe129)). However, increasing the pH of the reaction mixture to 7.4 decreased the CeIVK hydrolytic reactivity towards Hb, resulting in the cleavage of only one peptide bond (β(Asp128-Phe129)). Combination of UV-Vis, circular dichroism and Trp fluorescence spectroscopy indicated similar interactions between Hb and CeIVK at both pH conditions; however, 31P NMR spectroscopy showed faster reduction of CeIVK into the hydrolytically inactive CeIIIK form in the presence of protein at pH 7.4. In agreement with these results, careful mapping of all hydrolyzed Asp-X bonds on the protein structure revealed that the lower reactivity toward the α-chain was consistent with the presence of more redox-active amino acids (Tyr and His) in this subunit in comparison with the β-chain. This points towards a link between the presence of the redox-active sites on the protein surface and efficiency and selectivity of redox-active MS-POMs as artificial proteases. More importantly, the study provides a way to tune the redox and hydrolytic reactivity of MS-POMs towards proteins through adjustment of reaction parameters like temperature and pH.
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Affiliation(s)
| | - Hong Giang T Ly
- KU Leuven, Department of Chemistry Celestijnenlaan 200F 3001 Leuven Belgium
- Department of Chemistry, College of Natural Sciences, Can Tho University Can Tho Vietnam
| | - Jens Moons
- KU Leuven, Department of Chemistry Celestijnenlaan 200F 3001 Leuven Belgium
| | | | - Paul Proost
- KU Leuven Department of Microbiology, Immunology, and Transplantation Herestraat 49 3000 Leuven Belgium
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Bacterial hyperpolarization modulated by polyoxometalates for solutions of antibiotic resistance. J Inorg Biochem 2021; 220:111463. [PMID: 33894505 DOI: 10.1016/j.jinorgbio.2021.111463] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2021] [Revised: 04/06/2021] [Accepted: 04/08/2021] [Indexed: 01/02/2023]
Abstract
Developing strategies against the antibiotic resistance is a major global challenge for public health. Here, we report the synergy of the combination of Preyssler-type polyoxometalates (POMs) ([NaP5W30O110]14- or [AgP5W30O110]14-) and ribosome-targeting antibiotics for high antibacterial efficiency with low risk of antibiotic resistance. Due to their ultra-small sizes and active surface ligands, POM anions show strong affinity to bacterial cell membrane and impose hyperpolarization of the bacterial cells as well as the decrease of Mg2+ influx by blocking Mg2+ transporters, which finally lead to the structural perturbations of ribosomes and instability of bacterial structures. The bacterial growth can, therefore, be regulated by the presence of POMs: a fraction of Bacillus subtilis shifted to a 'dormant', slow-growing cellular state (an extended lag phase) upon the application of subinhibitory concentration of POMs. An approach to combat antibiotic resistant bacteria by applying POMs at their early growth phase followed by antibiotic exposure is validated, and its high efficiency for bacterial control is confirmed.
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Azambuja FD, Moons J, Parac-Vogt TN. The Dawn of Metal-Oxo Clusters as Artificial Proteases: From Discovery to the Present and Beyond. Acc Chem Res 2021; 54:1673-1684. [PMID: 33600141 DOI: 10.1021/acs.accounts.0c00666] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
The selective cleavage of peptide bonds in proteins is of paramount importance in many areas of the biological and medical sciences, playing a key role in protein structure/function/folding analysis, protein engineering, and targeted proteolytic drug design. Current applications that depend on selective protein hydrolysis largely rely on costly proteases such as trypsin, which are sensitive to the pH, ionic strength, and temperature conditions. Moreover, >95% of peptides deposited in databases are generated from trypsin digests, restricting the information within the analyzed proteomes. On the other hand, harsh and toxic chemical reagents such as BrCN are very active but cause permanent modifications of certain amino acid residues. Consequently, transition-metal complexes have emerged as smooth and selective artificial proteases owing to their ability to provide larger fragments and complementary structural information. In the past decade, our group has discovered the unique protease activity of diverse metal-oxo clusters (MOC) and pioneered a distinctive approach to the development of selective artificial proteases. In contrast to classical coordination complexes which often depend on amino acid side chains to control the regioselectivity, the selectivity profile of MOCs is determined by a complex combination of structural factors, such as the protein surface charge, metal coordination to specific side chains, and hydrogen bonding between the protein surface and the MOC scaffold.In this Account, we present a critical overview of our detailed kinetic, spectroscopic, and crystallographic studies in MOC-assisted peptide bond hydrolysis, from its origins to the current rational and detailed mechanistic understanding. To this end, reactivity trends related to the structure and properties of MOCs based on the hydrolysis of small model peptides and key structural aspects governing the selectivity of protein hydrolysis are presented. Finally, our endeavors in seeking the next generation of heterogeneous MOC-based proteases are briefly discussed by embedding MOCs in metal-organic frameworks or using them as discrete nanoclusters in the development of artificial protease-like materials (i.e., nanozymes). The deep and comprehensive understanding sought experimentally and theoretically over the years in aqueous systems with intrinsic polar and charged substrates provides a unique view of the reactivity between inorganic moieties and biomolecules, thereby broadly impacting several different fields (e.g., catalysis in biochemistry, inorganic chemistry, and organic chemistry).
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Affiliation(s)
| | - Jens Moons
- Department of Chemistry, KU Leuven, Celestijnenlaan 200F, 3001 Leuven, Belgium
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Zhou D, Chen YX, Yuan XY, Lu Y, Zhang M, Liu JK. Self-induced synthesis under neutral conditions and novel visible light photocatalytic activity of Ag 4V 2O 7 polyoxometalate. NEW J CHEM 2021. [DOI: 10.1039/d1nj01390d] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Ag4V2O7 POM with a nanorod-bundle structure was designed under neutral conditions, which showed good visible photodegradation performance against chloramphenicol.
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Affiliation(s)
- Dan Zhou
- School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Yi-Xiang Chen
- School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Xiao-Yu Yuan
- School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Yi Lu
- School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Min Zhang
- School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
| | - Jin-Ku Liu
- School of Chemistry and Molecular Engineering
- East China University of Science and Technology
- Shanghai 200237
- P. R. China
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